LOC101252024 cDNA ORF clone, Solanum lycopersicum(Lycopersicon esculentum)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC101252024
Entrez Gene ID	101252024
Full Name	protein ROOT PRIMORDIUM DEFECTIVE 1
Gene Type	protein-coding
Organism	Solanum lycopersicum(Lycopersicon esculentum)

mRNA and Protein(s)

mRNA	Protein	Name
XM_004247102.3	XP_004247150.1	protein ROOT PRIMORDIUM DEFECTIVE 1
XM_004247102.4	XP_004247150.1	protein WHAT'S THIS FACTOR 1 homolog

Pathways from BioSystems
Gene Ontology

The following LOC101252024 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC101252024 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)
OSo100399	XM_004247102.4 Latest version!	Solanum lycopersicum protein WHAT'S THIS FACTOR 1 homolog (LOC101252024), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$258.30 $369.00
View Old Accession Versions >>
OSo100399	XM_004247102.3	Solanum lycopersicum protein ROOT PRIMORDIUM DEFECTIVE 1 (LOC101252024), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$258.30 $369.00
Hide Old Accession Versions >>

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC101252024 ( XM_004247102.3 ) cDNA ORF clone, Solanum lycopersicum(Lycopersicon esculentum) -> XP_004247150.1 Solanum lycopersicum protein ROOT PRIMORDIUM DEFECTIVE 1 (LOC101252024), mRNA.

Price & Availability↑

CloneID	OSo100399
Clone ID Related Accession (Same CDS sequence)	XM_004247102.3 , XM_004247102.4
Accession Version	XM_004247102.3	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1230bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-11-21
Organism	Solanum lycopersicum(Lycopersicon esculentum)
Product	protein ROOT PRIMORDIUM DEFECTIVE 1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_015446.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Nov 22, 2016 this sequence version replaced XM_004247102.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Solanum lycopersicum Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGCAATTCA GTAATCGGCT TGTACATTCA CTCAGAAGCA CTAACCGGAA ACATCATGAG 
TATGGGTTTT TCATGCAATT CAAAGCATCA ATTTCAAGCC TGAAAGTGGC ATGGCGGAAG 
GACCCAAAGC TAGACCAAGC CATTGAAAAC GACAAGAAGT GGAAGCAGTG TGCAAGAGTT 
GTCAAAGAAG TGCTAAACGA GCCGGGTCAG GTAATCCCTC TTCACTATTT AGAGAAACGA 
CGTGAAAGAT TGGGGTTGCA AGTAAAAATC AAAACTTTTC TTGATTGGAA CCCCGGTTTG 
TTTGATTTAT ATCTGGATCG GGTCAGACCC AAATCAGAAC CGGTCTCATT TGTTCGACCC 
AGTGAAAGAC TAAGACTATT CTTGGAAGAG GAGAGTAGGA TTTTTGTTAA AAATGAATCT 
TTATTGGTTT CTAAATTATG TAAACTTTTG ATGATGTCTA AGGATAAGGT TGTAAGTGCT 
GATAAATTAG TACAGGTGAA GAGGGAATTC GGGTTCCCGA ATGATCTTTT AGTAAATTTA 
GTGCCAAAAT ATCCGGAATA TTTTAACTTA ATTGGTGAAC CTGGTGAGGG CAAATCATTC 
TTGCAGTTGG TTAAATGGAA CCCAGAATTT GCGAAGTCGG TGATTGAGCT AAGAGCTGAG 
GAGGAATCGA GGTTAACAGG AATCAGAACT AGGCCAGCAT TTAACTGGAA GCTTCCTCCA 
GGTTTTTTCA TTAGGAAGGA AGTGAGAGAG TGGATTCGAG ATTGGATGGA GCTACCTTAT 
GTATCACCAT ATGATGATGT ATCGCATTTG GAACAGTCTT CACGAGAGAT GGAGAAGAGG 
AATGTGGGGG TTTTCCACGA GTTGCTATCA CTTTCTCTTT ATAAGAGGGT TCCCATTCCC 
ATTTTAGGCA AGTTTAGTGA TGAGTATAGG TTCTCAAACG CATTCTCAAA TGTATTTACT 
CGGCATTCGG GGATATTCTA TACTTCGTTG AAGTGTGGGA TTAAAACTGC AATGCTTAGG 
GAAGCATACA AGGATGGTGA GCTGATAGAT CGAGACCCAC TTCTTGAGAT TAAAGACAAA 
TTTCTTGAGT TACTTGCTGA GGGCCACAAA CAGAAAGATG AGCTCTTGAG ATTGCAGGGA 
GAGATGGTTC AGAAGGACAT GGAAATGATG GCAGTCAGCA ATAATGATCT AGACTACCAC 
AAATGTGAAG AGGAAGATGC TGTGCTTTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_004247150.1
CDS	159..1388
Translation	MQFSNRLVHSLRSTNRKHHEYGFFMQFKASISSLKVAWRKDPKLDQAIENDKKWKQCARVVKEVLNEPGQVIPLHYLEKRRERLGLQVKIKTFLDWNPGLFDLYLDRVRPKSEPVSFVRPSERLRLFLEEESRIFVKNESLLVSKLCKLLMMSKDKVVSADKLVQVKREFGFPNDLLVNLVPKYPEYFNLIGEPGEGKSFLQLVKWNPEFAKSVIELRAEEESRLTGIRTRPAFNWKLPPGFFIRKEVREWIRDWMELPYVSPYDDVSHLEQSSREMEKRNVGVFHELLSLSLYKRVPIPILGKFSDEYRFSNAFSNVFTRHSGIFYTSLKCGIKTAMLREAYKDGELIDRDPLLEIKDKFLELLAEGHKQKDELLRLQGEMVQKDMEMMAVSNNDLDYHKCEEEDAVL

Target ORF information:

RefSeq Version	XM_004247102.3
Organism	Solanum lycopersicum(Lycopersicon esculentum)
Definition	Solanum lycopersicum protein ROOT PRIMORDIUM DEFECTIVE 1 (LOC101252024), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_004247102.3

ORF Insert Sequence:

ATGCAATTCA GTAATCGGCT TGTACATTCA CTCAGAAGCA CTAACCGGAA ACATCATGAG 
TATGGGTTTT TCATGCAATT CAAAGCATCA ATTTCAAGCC TGAAAGTGGC ATGGCGGAAG 
GACCCAAAGC TAGACCAAGC CATTGAAAAC GACAAGAAGT GGAAGCAGTG TGCAAGAGTT 
GTCAAAGAAG TGCTAAACGA GCCGGGTCAG GTAATCCCTC TTCACTATTT AGAGAAACGA 
CGTGAAAGAT TGGGGTTGCA AGTAAAAATC AAAACTTTTC TTGATTGGAA CCCCGGTTTG 
TTTGATTTAT ATCTGGATCG GGTCAGACCC AAATCAGAAC CGGTCTCATT TGTTCGACCC 
AGTGAAAGAC TAAGACTATT CTTGGAAGAG GAGAGTAGGA TTTTTGTTAA AAATGAATCT 
TTATTGGTTT CTAAATTATG TAAACTTTTG ATGATGTCTA AGGATAAGGT TGTAAGTGCT 
GATAAATTAG TACAGGTGAA GAGGGAATTC GGGTTCCCGA ATGATCTTTT AGTAAATTTA 
GTGCCAAAAT ATCCGGAATA TTTTAACTTA ATTGGTGAAC CTGGTGAGGG CAAATCATTC 
TTGCAGTTGG TTAAATGGAA CCCAGAATTT GCGAAGTCGG TGATTGAGCT AAGAGCTGAG 
GAGGAATCGA GGTTAACAGG AATCAGAACT AGGCCAGCAT TTAACTGGAA GCTTCCTCCA 
GGTTTTTTCA TTAGGAAGGA AGTGAGAGAG TGGATTCGAG ATTGGATGGA GCTACCTTAT 
GTATCACCAT ATGATGATGT ATCGCATTTG GAACAGTCTT CACGAGAGAT GGAGAAGAGG 
AATGTGGGGG TTTTCCACGA GTTGCTATCA CTTTCTCTTT ATAAGAGGGT TCCCATTCCC 
ATTTTAGGCA AGTTTAGTGA TGAGTATAGG TTCTCAAACG CATTCTCAAA TGTATTTACT 
CGGCATTCGG GGATATTCTA TACTTCGTTG AAGTGTGGGA TTAAAACTGC AATGCTTAGG 
GAAGCATACA AGGATGGTGA GCTGATAGAT CGAGACCCAC TTCTTGAGAT TAAAGACAAA 
TTTCTTGAGT TACTTGCTGA GGGCCACAAA CAGAAAGATG AGCTCTTGAG ATTGCAGGGA 
GAGATGGTTC AGAAGGACAT GGAAATGATG GCAGTCAGCA ATAATGATCT AGACTACCAC 
AAATGTGAAG AGGAAGATGC TGTGCTTTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

LOC101252024 ( XM_004247102.4 ) cDNA ORF clone, Solanum lycopersicum(Lycopersicon esculentum) -> XP_004247150.1 Solanum lycopersicum protein WHAT'S THIS FACTOR 1 homolog (LOC101252024), mRNA.

Price & Availability↑

CloneID	OSo100399
Clone ID Related Accession (Same CDS sequence)	XM_004247102.3 , XM_004247102.4
Accession Version	XM_004247102.4 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1230bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2018-08-07
Organism	Solanum lycopersicum(Lycopersicon esculentum)
Product	protein WHAT'S THIS FACTOR 1 homolog
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_015446.3) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 8, 2018 this sequence version replaced XM_004247102.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Solanum lycopersicum Annotation Release 103 Annotation Version :: 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGCAATTCA GTAATCGGCT TGTACATTCA CTCAGAAGCA CTAACCGGAA ACATCATGAG 
TATGGGTTTT TCATGCAATT CAAAGCATCA ATTTCAAGCC TGAAAGTGGC ATGGCGGAAG 
GACCCAAAGC TAGACCAAGC CATTGAAAAC GACAAGAAGT GGAAGCAGTG TGCAAGAGTT 
GTCAAAGAAG TGCTAAACGA GCCGGGTCAG GTAATCCCTC TTCACTATTT AGAGAAACGA 
CGTGAAAGAT TGGGGTTGCA AGTAAAAATC AAAACTTTTC TTGATTGGAA CCCCGGTTTG 
TTTGATTTAT ATCTGGATCG GGTCAGACCC AAATCAGAAC CGGTCTCATT TGTTCGACCC 
AGTGAAAGAC TAAGACTATT CTTGGAAGAG GAGAGTAGGA TTTTTGTTAA AAATGAATCT 
TTATTGGTTT CTAAATTATG TAAACTTTTG ATGATGTCTA AGGATAAGGT TGTAAGTGCT 
GATAAATTAG TACAGGTGAA GAGGGAATTC GGGTTCCCGA ATGATCTTTT AGTAAATTTA 
GTGCCAAAAT ATCCGGAATA TTTTAACTTA ATTGGTGAAC CTGGTGAGGG CAAATCATTC 
TTGCAGTTGG TTAAATGGAA CCCAGAATTT GCGAAGTCGG TGATTGAGCT AAGAGCTGAG 
GAGGAATCGA GGTTAACAGG AATCAGAACT AGGCCAGCAT TTAACTGGAA GCTTCCTCCA 
GGTTTTTTCA TTAGGAAGGA AGTGAGAGAG TGGATTCGAG ATTGGATGGA GCTACCTTAT 
GTATCACCAT ATGATGATGT ATCGCATTTG GAACAGTCTT CACGAGAGAT GGAGAAGAGG 
AATGTGGGGG TTTTCCACGA GTTGCTATCA CTTTCTCTTT ATAAGAGGGT TCCCATTCCC 
ATTTTAGGCA AGTTTAGTGA TGAGTATAGG TTCTCAAACG CATTCTCAAA TGTATTTACT 
CGGCATTCGG GGATATTCTA TACTTCGTTG AAGTGTGGGA TTAAAACTGC AATGCTTAGG 
GAAGCATACA AGGATGGTGA GCTGATAGAT CGAGACCCAC TTCTTGAGAT TAAAGACAAA 
TTTCTTGAGT TACTTGCTGA GGGCCACAAA CAGAAAGATG AGCTCTTGAG ATTGCAGGGA 
GAGATGGTTC AGAAGGACAT GGAAATGATG GCAGTCAGCA ATAATGATCT AGACTACCAC 
AAATGTGAAG AGGAAGATGC TGTGCTTTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_004247150.1
CDS	172..1401
Translation	MQFSNRLVHSLRSTNRKHHEYGFFMQFKASISSLKVAWRKDPKLDQAIENDKKWKQCARVVKEVLNEPGQVIPLHYLEKRRERLGLQVKIKTFLDWNPGLFDLYLDRVRPKSEPVSFVRPSERLRLFLEEESRIFVKNESLLVSKLCKLLMMSKDKVVSADKLVQVKREFGFPNDLLVNLVPKYPEYFNLIGEPGEGKSFLQLVKWNPEFAKSVIELRAEEESRLTGIRTRPAFNWKLPPGFFIRKEVREWIRDWMELPYVSPYDDVSHLEQSSREMEKRNVGVFHELLSLSLYKRVPIPILGKFSDEYRFSNAFSNVFTRHSGIFYTSLKCGIKTAMLREAYKDGELIDRDPLLEIKDKFLELLAEGHKQKDELLRLQGEMVQKDMEMMAVSNNDLDYHKCEEEDAVL

Target ORF information:

RefSeq Version	XM_004247102.4
Organism	Solanum lycopersicum(Lycopersicon esculentum)
Definition	Solanum lycopersicum protein WHAT'S THIS FACTOR 1 homolog (LOC101252024), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_004247102.4

ORF Insert Sequence:

ATGCAATTCA GTAATCGGCT TGTACATTCA CTCAGAAGCA CTAACCGGAA ACATCATGAG 
TATGGGTTTT TCATGCAATT CAAAGCATCA ATTTCAAGCC TGAAAGTGGC ATGGCGGAAG 
GACCCAAAGC TAGACCAAGC CATTGAAAAC GACAAGAAGT GGAAGCAGTG TGCAAGAGTT 
GTCAAAGAAG TGCTAAACGA GCCGGGTCAG GTAATCCCTC TTCACTATTT AGAGAAACGA 
CGTGAAAGAT TGGGGTTGCA AGTAAAAATC AAAACTTTTC TTGATTGGAA CCCCGGTTTG 
TTTGATTTAT ATCTGGATCG GGTCAGACCC AAATCAGAAC CGGTCTCATT TGTTCGACCC 
AGTGAAAGAC TAAGACTATT CTTGGAAGAG GAGAGTAGGA TTTTTGTTAA AAATGAATCT 
TTATTGGTTT CTAAATTATG TAAACTTTTG ATGATGTCTA AGGATAAGGT TGTAAGTGCT 
GATAAATTAG TACAGGTGAA GAGGGAATTC GGGTTCCCGA ATGATCTTTT AGTAAATTTA 
GTGCCAAAAT ATCCGGAATA TTTTAACTTA ATTGGTGAAC CTGGTGAGGG CAAATCATTC 
TTGCAGTTGG TTAAATGGAA CCCAGAATTT GCGAAGTCGG TGATTGAGCT AAGAGCTGAG 
GAGGAATCGA GGTTAACAGG AATCAGAACT AGGCCAGCAT TTAACTGGAA GCTTCCTCCA 
GGTTTTTTCA TTAGGAAGGA AGTGAGAGAG TGGATTCGAG ATTGGATGGA GCTACCTTAT 
GTATCACCAT ATGATGATGT ATCGCATTTG GAACAGTCTT CACGAGAGAT GGAGAAGAGG 
AATGTGGGGG TTTTCCACGA GTTGCTATCA CTTTCTCTTT ATAAGAGGGT TCCCATTCCC 
ATTTTAGGCA AGTTTAGTGA TGAGTATAGG TTCTCAAACG CATTCTCAAA TGTATTTACT 
CGGCATTCGG GGATATTCTA TACTTCGTTG AAGTGTGGGA TTAAAACTGC AATGCTTAGG 
GAAGCATACA AGGATGGTGA GCTGATAGAT CGAGACCCAC TTCTTGAGAT TAAAGACAAA 
TTTCTTGAGT TACTTGCTGA GGGCCACAAA CAGAAAGATG AGCTCTTGAG ATTGCAGGGA 
GAGATGGTTC AGAAGGACAT GGAAATGATG GCAGTCAGCA ATAATGATCT AGACTACCAC 
AAATGTGAAG AGGAAGATGC TGTGCTTTGA