Gene Symbol | SR45 |
Entrez Gene ID | 838230 |
Full Name | arginine/serine-rich 45 |
Synonyms | ARGININE/SERINE-RICH PROTEIN SR45,AtSR45,F19K19.9,F19K19_9,RNPS1,arginine/serine-rich 45 |
Gene Type | protein-coding |
Organism | Arabidopsis thaliana(thale cress) |
ORF » Species Summary » Arabidopsis thaliana » SR45 cDNA ORF clone
Gene Symbol | SR45 |
Entrez Gene ID | 838230 |
Full Name | arginine/serine-rich 45 |
Synonyms | ARGININE/SERINE-RICH PROTEIN SR45,AtSR45,F19K19.9,F19K19_9,RNPS1,arginine/serine-rich 45 |
Gene Type | protein-coding |
Organism | Arabidopsis thaliana(thale cress) |
mRNA | Protein | Name |
---|---|---|
NM_101523.4 | NP_173107.1 | arginine/serine-rich 45 |
NM_001198085.1 | NP_001185014.1 | arginine/serine-rich 45 |
NM_001332240.1 | NP_001321125.1 | arginine/serine-rich 45 |
NM_001332241.1 | NP_001321126.1 | arginine/serine-rich 45 |
NM_001332238.1 | NP_001321127.1 | arginine/serine-rich 45 |
NM_202115.3 | NP_973844.1 | arginine/serine-rich 45 |
NM_001332239.1 | NP_001321128.1 | arginine/serine-rich 45 |
Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.
Theologis A, Ecker JR, Palm CJ, Federspiel NA, Kaul S, White O, Alonso J, Altafi H, Araujo R, Bowman CL, Brooks SY, Buehler E, Chan A, Chao Q, Chen H, Cheuk RF, Chin CW, Chung MK, Conn L, Conway AB, Conway AR, Creasy TH, Dewar K, Dunn P, Etgu P, Feldblyum TV, Feng J, Fong B, Fujii CY, Gill JE, Goldsmith AD, Haas B, Hansen NF, Hughes B, Huizar L, Hunter JL, Jenkins J, Johnson-Hopson C, Khan S, Khaykin E, Kim CJ, Koo HL, Kremenetskaia I, Kurtz DB, Kwan A, Lam B, Langin-Hooper S, Lee A, Lee JM, Lenz CA, Li JH, Li Y, Lin X, Liu SX, Liu ZA, Luros JS, Maiti R, Marziali A, Militscher J, Miranda M, Nguyen M, Nierman WC, Osborne BI, Pai G, Peterson J, Pham PK, Rizzo M, Rooney T, Rowley D, Sakano H, Salzberg SL, Schwartz JR, Shinn P, Southwick AM, Sun H, Tallon LJ, Tambunga G, Toriumi MJ, Town CD, Utterback T, Van Aken S, Vaysberg M, Vysotskaia VS, Walker M, Wu D, Yu G, Fraser CM, Venter JC, Davis RW
Nature408(6814)816-20(2000 Dec)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
Data demonstrate that SR45 regulates alternative splicing of the Arabidopsis 5PTase13 gene, which encodes an inositol polyphosphate 5-phosphatase previously shown to interact with and regulate the stability of SnRK1 in vitro, thus providing a mechanistic link between SR45 function and the modulation of degradation of the SnRK1 energy sensor in response to sugars.
Title: The Arabidopsis SR45 Splicing Factor, a Negative Regulator of Sugar Signaling, Modulates SNF1-Related Protein Kinase 1 Stability.
SR45 plays an unexpected role in mRNA processing of intronless genes, and numerous abscisic acid (ABA) signaling genes are targeted for regulation at the posttranscriptional level.
Title: Transcriptome-Wide Identification of RNA Targets of Arabidopsis SERINE/ARGININE-RICH45 Uncovers the Unexpected Roles of This RNA Binding Protein in RNA Processing.
SR45 recruits U1snRNP and U2AF to 5' and 3' splice sites, respectively, by interacting with pre-mRNA, U1-70K and U2AF(35) and modulates alternative splicing (AS).
Title: Interactions of SR45, an SR-like protein, with spliceosomal proteins and an intronic sequence: insights into regulated splicing.
Subcellular and subnuclear distribution of atSR45a and atSR30
Title: Subcellular and subnuclear distribution of high-light responsive serine/arginine-rich proteins, atSR45a and atSR30, in Arabidopsis thaliana.
DNA methylation establishment and maintenance defects present in sr45-1 mutants are enhanced in dcl3-1 mutant background, suggesting a synergistic cooperation between SR45 and DICER-LIKE3 (DCL3) in the RdDM pathway.
Title: The splicing factor SR45 affects the RNA-directed DNA methylation pathway in Arabidopsis.
The following SR45 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the SR45 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OAb23728 | |
Clone ID Related Accession (Same CDS sequence) | NM_001198085.1 | |
Accession Version | NM_001198085.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1278bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | arginine/serine-rich 45 | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003070). |
1 | ATGGCGAAAC CAAGTCGTGG CCGTCGTTCC CCCTCCGTGT CTGGCTCGTC ATCTCGTTCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001185014.1 |
CDS | 167..1444 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001198085.1 |
1 | ATGGCGAAAC CAAGTCGTGG CCGTCGTTCC CCCTCCGTGT CTGGCTCGTC ATCTCGTTCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAb31086 | |
Clone ID Related Accession (Same CDS sequence) | NM_101523.4 | |
Accession Version | NM_101523.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1245bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | arginine/serine-rich 45 | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003070). On Sep 12, 2016 this sequence version replaced NM_101523.3. |
1 | ATGGCGAAAC CAAGTCGTGG CCGTCGTTCC CCCTCCGTGT CTGGCTCGTC ATCTCGTTCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_173107.1 |
CDS | 156..1400 |
Translation |
Target ORF information:
Target ORF information:
|
NM_101523.4 |
1 | ATGGCGAAAC CAAGTCGTGG CCGTCGTTCC CCCTCCGTGT CTGGCTCGTC ATCTCGTTCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAb31087 | |
Clone ID Related Accession (Same CDS sequence) | NM_202115.3 | |
Accession Version | NM_202115.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1224bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | arginine/serine-rich 45 | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003070). On Sep 12, 2016 this sequence version replaced NM_202115.2. |
1 | ATGGCGAAAC CAAGTCGTGG CCGTCGTTCC CCCTCCGTGT CTGGCTCGTC ATCTCGTTCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_973844.1 |
CDS | 156..1379 |
Translation |
Target ORF information:
Target ORF information:
|
NM_202115.3 |
1 | ATGGCGAAAC CAAGTCGTGG CCGTCGTTCC CCCTCCGTGT CTGGCTCGTC ATCTCGTTCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAb33572 | |
Clone ID Related Accession (Same CDS sequence) | NM_001332238.1 | |
Accession Version | NM_001332238.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1146bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | arginine/serine-rich 45 | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003070). |
1 | ATGGCGAAAC CAAGTCGTGG CCGTCGTTCC CCCTCCGTGT CTGGCTCGTC ATCTCGTTCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001321127.1 |
CDS | 156..1301 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001332238.1 |
1 | ATGGCGAAAC CAAGTCGTGG CCGTCGTTCC CCCTCCGTGT CTGGCTCGTC ATCTCGTTCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAb33573 | |
Clone ID Related Accession (Same CDS sequence) | NM_001332239.1 | |
Accession Version | NM_001332239.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1152bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | arginine/serine-rich 45 | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003070). |
1 | ATGGCGAAAC CAAGTCGTGG CCGTCGTTCC CCCTCCGTGT CTGGCTCGTC ATCTCGTTCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001321128.1 |
CDS | 188..1339 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001332239.1 |
1 | ATGGCGAAAC CAAGTCGTGG CCGTCGTTCC CCCTCCGTGT CTGGCTCGTC ATCTCGTTCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAb33574 | |
Clone ID Related Accession (Same CDS sequence) | NM_001332240.1 , NM_001332241.1 | |
Accession Version | NM_001332240.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1167bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | arginine/serine-rich 45 | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003070). |
1 | ATGGCGAAAC CAAGTCGTGG CCGTCGTTCC CCCTCCGTGT CTGGCTCGTC ATCTCGTTCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001321125.1 |
CDS | 171..1337 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001332240.1 |
1 | ATGGCGAAAC CAAGTCGTGG CCGTCGTTCC CCCTCCGTGT CTGGCTCGTC ATCTCGTTCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAb33574 | |
Clone ID Related Accession (Same CDS sequence) | NM_001332240.1 , NM_001332241.1 | |
Accession Version | NM_001332241.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1167bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | arginine/serine-rich 45 | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003070). |
1 | ATGGCGAAAC CAAGTCGTGG CCGTCGTTCC CCCTCCGTGT CTGGCTCGTC ATCTCGTTCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001321126.1 |
CDS | 171..1337 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001332241.1 |
1 | ATGGCGAAAC CAAGTCGTGG CCGTCGTTCC CCCTCCGTGT CTGGCTCGTC ATCTCGTTCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. |