Gene Symbol | ATMYC1 |
Entrez Gene ID | 827965 |
Full Name | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
Synonyms | F6N23.22,F6N23_22,myc1 |
Gene Type | protein-coding |
Organism | Arabidopsis thaliana(thale cress) |
ORF » Species Summary » Arabidopsis thaliana » ATMYC1 cDNA ORF clone
Gene Symbol | ATMYC1 |
Entrez Gene ID | 827965 |
Full Name | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
Synonyms | F6N23.22,F6N23_22,myc1 |
Gene Type | protein-coding |
Organism | Arabidopsis thaliana(thale cress) |
mRNA | Protein | Name |
---|---|---|
NM_001160722.2 | NP_001154194.1 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
NM_116272.4 | NP_191957.2 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
NM_001340255.1 | NP_001329692.1 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
Arabidopsis thaliana (thale cress) | GL3 | NP_680372.1 |
Oryza sativa (rice) | Os01g0576100 | NP_001043391.2 |
Oryza sativa (rice) | Os04g0557800 | NP_001053532.1 |
Oryza sativa (rice) | Os04g0557200 | NP_001053530.2 |
Oryza sativa (rice) | Os04g0557500 | NP_001053531.2 |
Arabidopsis thaliana (thale cress) | ATMYC1 | NP_191957.2 |
Oryza sativa (rice) | Os11g0258700 | NP_001067642.2 |
Arabidopsis thaliana (thale cress) | EGL3 | NP_001185302.1 |
Oryza sativa (rice) | Os01g0577300 | NP_001043392.2 |
Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.
Mayer K, Sch?ller C, Wambutt R, Murphy G, Volckaert G, Pohl T, D?sterh?ft A, Stiekema W, Entian KD, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, M?ller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, Reichert B, Portatelle D, Perez-Alonso M, Boutry M, Bancroft I, Vos P, Hoheisel J, Zimmermann W, Wedler H, Ridley P, Langham SA, McCullagh B, Bilham L, Robben J, Van der Schueren J, Grymonprez B, Chuang YJ, Vandenbussche F, Braeken M, Weltjens I, Voet M, Bastiaens I, Aert R, Defoor E, Weitzenegger T, Bothe G, Ramsperger U, Hilbert H, Braun M, Holzer E, Brandt A, Peters S, van Staveren M, Dirske W, Mooijman P, Klein Lankhorst R, Rose M, Hauf J, K?tter P, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Van den Daele H, De Keyser A, Buysshaert C, Gielen J, Villarroel R, De Clercq R, Van Montagu M, Rogers J, Cronin A, Quail M, Bray-Allen S, Clark L, Doggett J, Hall S, Kay M, Lennard N, McLay K, Mayes R, Pettett A, Rajandream MA, Lyne M, Benes V, Rechmann S, Borkova D, Bl?cker H, Scharfe M, Grimm M, L?hnert TH, Dose S, de Haan M, Maarse A, Sch?fer M, M?ller-Auer S, Gabel C, Fuchs M, Fartmann B, Granderath K, Dauner D, Herzl A, Neumann S, Argiriou A, Vitale D, Liguori R, Piravandi E, Massenet O, Quigley F, Clabauld G, M?ndlein A, Felber R, Schnabl S, Hiller R, Schmidt W, Lecharny A, Aubourg S, Chefdor F, Cooke R, Berger C, Montfort A, Casacuberta E, Gibbons T, Weber N, Vandenbol M, Bargues M, Terol J, Torres A, Perez-Perez A, Purnelle B, Bent E, Johnson S, Tacon D, Jesse T, Heijnen L, Schwarz S, Scholler P, Heber S, Francs P, Bielke C, Frishman D, Haase D, Lemcke K, Mewes HW, Stocker S, Zaccaria P, Bevan M, Wilson RK, de la Bastide M, Habermann K, Parnell L, Dedhia N, Gnoj L, Schutz K, Huang E, Spiegel L, Sehkon M, Murray J, Sheet P, Cordes M, Abu-Threideh J, Stoneking T, Kalicki J, Graves T, Harmon G, Edwards J, Latreille P, Courtney L, Cloud J, Abbott A, Scott K, Johnson D, Minx P, Bentley D, Fulton B, Miller N, Greco T, Kemp K, Kramer J, Fulton L, Mardis E, Dante M, Pepin K, Hillier L, Nelson J, Spieth J, Ryan E, Andrews S, Geisel C, Layman D, Du H, Ali J, Berghoff A, Jones K, Drone K, Cotton M, Joshu C, Antonoiu B, Zidanic M, Strong C, Sun H, Lamar B, Yordan C, Ma P, Zhong J, Preston R, Vil D, Shekher M, Matero A, Shah R, Swaby IK, O'Shaughnessy A, Rodriguez M, Hoffmann J, Till S, Granat S, Shohdy N, Hasegawa A, Hameed A, Lodhi M, Johnson A, Chen E, Marra M, Martienssen R, McCombie WR
Nature402(6763)769-77(1999 Dec)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
AtMYC1 protein is predominantly localised in the cytoplasm and can relocate GL1 from the nucleus into the cytoplasm.
Title: Mutual control of intracellular localisation of the patterning proteins AtMYC1, GL1 and TRY/CPC in Arabidopsis.
AtMYC1 is an important regulator of trichome and root hair initiation
Title: A single amino acid substitution in IIIf subfamily of basic helix-loop-helix transcription factor AtMYC1 leads to trichome and root hair patterning defects by abolishing its interaction with partner proteins in Arabidopsis.
Natural allelic variation defines a role for ATMYC1: trichome cell fate determination
Title: Natural allelic variation defines a role for ATMYC1: trichome cell fate determination.
The following ATMYC1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the ATMYC1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OAb15627 | |
Clone ID Related Accession (Same CDS sequence) | NM_116272.4 | |
Accession Version | NM_116272.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1581bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003075). On Sep 12, 2016 this sequence version replaced NM_116272.3. |
1 | ATGTCTTTGA CAATGGCTGA TGGTGTAGAA GCTGCAGCAG GAAGAAGTAA AAGACAAAAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_191957.2 |
CDS | 243..1823 |
Translation |
Target ORF information:
Target ORF information:
|
NM_116272.4 |
1 | ATGTCTTTGA CAATGGCTGA TGGTGTAGAA GCTGCAGCAG GAAGAAGTAA AAGACAAAAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAb32680 | |
Clone ID Related Accession (Same CDS sequence) | NM_001160722.2 | |
Accession Version | NM_001160722.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1743bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003075). On Sep 12, 2016 this sequence version replaced NM_001160722.1. |
1 | ATGTCTTTGA CAATGGCTGA TGGTGTAGAA GCTGCAGCAG GAAGAAGTAA AAGACAAAAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001154194.1 |
CDS | 98..1840 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001160722.2 |
1 | ATGTCTTTGA CAATGGCTGA TGGTGTAGAA GCTGCAGCAG GAAGAAGTAA AAGACAAAAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAb38856 | |
Clone ID Related Accession (Same CDS sequence) | NM_001340255.1 | |
Accession Version | NM_001340255.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1515bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003075). |
1 | ATGTCTTTGA CAATGGCTGA TGGTGTAGAA GCTGCAGCAG GAAGAAGTAA AAGACAAAAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001329692.1 |
CDS | 134..1648 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001340255.1 |
1 | ATGTCTTTGA CAATGGCTGA TGGTGTAGAA GCTGCAGCAG GAAGAAGTAA AAGACAAAAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. |