ORF » Species Summary » Populus trichocarpa » POPTR_0002s04500g cDNA ORF clone

POPTR_0002s04500g cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa)

The following POPTR_0002s04500g gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the POPTR_0002s04500g cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa06014 XM_024595528.1
Latest version!		 Populus trichocarpa E3 ubiquitin protein ligase DRIP2 (LOC7479996), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 7-9 $258.30
$369.00
OPa06014 XM_002302036.2
Latest version!		 Populus trichocarpa zinc finger family protein (POPTR_0002s04500g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 7-9 $258.30
$369.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    POPTR_0002s04500g ( XM_024595528.1 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_024451296.1 Populus trichocarpa E3 ubiquitin protein ligase DRIP2 (LOC7479996), transcript variant X1, mRNA.
    Price & Availability↑
    CloneID OPa06014
    Clone ID Related Accession (Same CDS sequence) XM_024595528.1 , XM_002302036.2
    Accession Version XM_024595528.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1311bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2018-04-08
    Organism Populus trichocarpa(black cottonwood)
    Product E3 ubiquitin protein ligase DRIP2
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037286.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    ATGGGAAATC AGAATCATCA GCGTCATCAT CAGGTGGTGA AAGTGAGGAG AGAAACGATT 
    GCAGCATGCA TGACATGTCT TCTCTGCAAT AAGTTACTTA GAGATGCCAC CACCATATCT 
    GAATGTCTGC ATACGTTTTG CAGGAAGTGT ATATATCGGA GGATATCAAA TGAAGGATTA 
    GATAGCTGCC CAATATGCAA CATCAATCTG GGCTGTGTTC CTTTGGAAAA ATTAAGGCCA 
    GACCACAATT TGCAAGATGT GAGGTCCAAG ATTTTCCCAT ACAAAAAAAG AAAGGTAGAG 
    GCACCTGAAG TTGCAGAGTC AGTTGCATTA CCAGTTACTA GAAGAAAGGA AAGGTCGCTC 
    TCATCATTGG TGGTCTGCAC TCCTAAAGTT TCCACGCACA CTACTACAAC AGGAAGAAGA 
    ACGAAACCTT TTCCAAGAAA GGCTGCTGCT TTACGAGGTA CCAATTTTTC CATTGAAAAA 
    CCCAATAACA AGGAACATGT TCCTGTTGAA GATAGTCCAG AGAGCTCAAG TTCACCCGAA 
    ACTCTGAAAA AACCTAATCA GAACATAAAG CAGAATTCTC CCTGTACTGA ACCCAGCCAA 
    CCTGATCCTG ATGAAGCAGA GAATGGGACT GAACCAAGGG ATGGGAAATC AGATCTCTGG 
    CAACCTTTAA ATTTTTTGGT GGAAGTTGCG AACAGAACCA AGTCATTCAA GTCTAGTCCA 
    CAACTTAATG ATGCTAAATC AGAATCTCGA CCTGTCCATG ACAATGAACC TCGAGCGCTT 
    AGAACCAAAT TTAAGGGAAA CAAAGACAAA TCAAAAGTAA AGGATGAAAA GAATAATATC 
    GATAATGTCT CTGAGGGACC AGTGGAACCA AAAAGGTTGC GCAGAATACG TCAAAAAAGG 
    GCAGTGTTTA ATAACATTTC AGGCATTTCA TCCCCGGCAG TGCTGGACAC TGCTGCTGCA 
    AAGCAAGAAA GAAGAAGTGG TACTGTTTGG TTTTCATTAT TGGCTTCTGA ACAGGAAGGA 
    GAAGCACCCT TGCCACAAAT TCCTTCAAGT TACTTAAGGC TAAAGGATGG AAATGTACCT 
    GTTTCTTTCA TCCAGAAGTA CTTGATGAAG AAGCTAGACC TCGCTAGTGA AGCTGAGGTT 
    GAGATCAGAT GCATGGGAAG ACCGGTGATC CCTACATTAC TATTGTATAA TTTAGTTGAT 
    CAGTGGCTAC AAACAGTGCC GAAGACTGAG CAAGTACCAG TAACTGCTGG TTTCTCGGCA 
    AAGGATTATG TGATGGTGCT TGCCTACGCT CGAAAGGTCC CAAACCAATA A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024451296.1
    CDS371..1681
    Translation

    Target ORF information:

    RefSeq Version XM_024595528.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa E3 ubiquitin protein ligase DRIP2 (LOC7479996), transcript variant X1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_024595528.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    ATGGGAAATC AGAATCATCA GCGTCATCAT CAGGTGGTGA AAGTGAGGAG AGAAACGATT 
    GCAGCATGCA TGACATGTCT TCTCTGCAAT AAGTTACTTA GAGATGCCAC CACCATATCT 
    GAATGTCTGC ATACGTTTTG CAGGAAGTGT ATATATCGGA GGATATCAAA TGAAGGATTA 
    GATAGCTGCC CAATATGCAA CATCAATCTG GGCTGTGTTC CTTTGGAAAA ATTAAGGCCA 
    GACCACAATT TGCAAGATGT GAGGTCCAAG ATTTTCCCAT ACAAAAAAAG AAAGGTAGAG 
    GCACCTGAAG TTGCAGAGTC AGTTGCATTA CCAGTTACTA GAAGAAAGGA AAGGTCGCTC 
    TCATCATTGG TGGTCTGCAC TCCTAAAGTT TCCACGCACA CTACTACAAC AGGAAGAAGA 
    ACGAAACCTT TTCCAAGAAA GGCTGCTGCT TTACGAGGTA CCAATTTTTC CATTGAAAAA 
    CCCAATAACA AGGAACATGT TCCTGTTGAA GATAGTCCAG AGAGCTCAAG TTCACCCGAA 
    ACTCTGAAAA AACCTAATCA GAACATAAAG CAGAATTCTC CCTGTACTGA ACCCAGCCAA 
    CCTGATCCTG ATGAAGCAGA GAATGGGACT GAACCAAGGG ATGGGAAATC AGATCTCTGG 
    CAACCTTTAA ATTTTTTGGT GGAAGTTGCG AACAGAACCA AGTCATTCAA GTCTAGTCCA 
    CAACTTAATG ATGCTAAATC AGAATCTCGA CCTGTCCATG ACAATGAACC TCGAGCGCTT 
    AGAACCAAAT TTAAGGGAAA CAAAGACAAA TCAAAAGTAA AGGATGAAAA GAATAATATC 
    GATAATGTCT CTGAGGGACC AGTGGAACCA AAAAGGTTGC GCAGAATACG TCAAAAAAGG 
    GCAGTGTTTA ATAACATTTC AGGCATTTCA TCCCCGGCAG TGCTGGACAC TGCTGCTGCA 
    AAGCAAGAAA GAAGAAGTGG TACTGTTTGG TTTTCATTAT TGGCTTCTGA ACAGGAAGGA 
    GAAGCACCCT TGCCACAAAT TCCTTCAAGT TACTTAAGGC TAAAGGATGG AAATGTACCT 
    GTTTCTTTCA TCCAGAAGTA CTTGATGAAG AAGCTAGACC TCGCTAGTGA AGCTGAGGTT 
    GAGATCAGAT GCATGGGAAG ACCGGTGATC CCTACATTAC TATTGTATAA TTTAGTTGAT 
    CAGTGGCTAC AAACAGTGCC GAAGACTGAG CAAGTACCAG TAACTGCTGG TTTCTCGGCA 
    AAGGATTATG TGATGGTGCT TGCCTACGCT CGAAAGGTCC CAAACCAATA A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    POPTR_0002s04500g ( XM_002302036.2 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_002302072.1 Populus trichocarpa zinc finger family protein (POPTR_0002s04500g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa06014
    Clone ID Related Accession (Same CDS sequence) XM_024595528.1 , XM_002302036.2
    Accession Version XM_002302036.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1311bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2013-12-30
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product zinc finger family protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008468). On Dec 16, 2013 this sequence version replaced XM_002302036.1. COMPLETENESS: incomplete on the 5' end. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    ATGGGAAATC AGAATCATCA GCGTCATCAT CAGGTGGTGA AAGTGAGGAG AGAAACGATT 
    GCAGCATGCA TGACATGTCT TCTCTGCAAT AAGTTACTTA GAGATGCCAC CACCATATCT 
    GAATGTCTGC ATACGTTTTG CAGGAAGTGT ATATATCGGA GGATATCAAA TGAAGGATTA 
    GATAGCTGCC CAATATGCAA CATCAATCTG GGCTGTGTTC CTTTGGAAAA ATTAAGGCCA 
    GACCACAATT TGCAAGATGT GAGGTCCAAG ATTTTCCCAT ACAAAAAAAG AAAGGTAGAG 
    GCACCTGAAG TTGCAGAGTC AGTTGCATTA CCAGTTACTA GAAGAAAGGA AAGGTCGCTC 
    TCATCATTGG TGGTCTGCAC TCCTAAAGTT TCCACGCACA CTACTACAAC AGGAAGAAGA 
    ACGAAACCTT TTCCAAGAAA GGCTGCTGCT TTACGAGGTA CCAATTTTTC CATTGAAAAA 
    CCCAATAACA AGGAACATGT TCCTGTTGAA GATAGTCCAG AGAGCTCAAG TTCACCCGAA 
    ACTCTGAAAA AACCTAATCA GAACATAAAG CAGAATTCTC CCTGTACTGA ACCCAGCCAA 
    CCTGATCCTG ATGAAGCAGA GAATGGGACT GAACCAAGGG ATGGGAAATC AGATCTCTGG 
    CAACCTTTAA ATTTTTTGGT GGAAGTTGCG AACAGAACCA AGTCATTCAA GTCTAGTCCA 
    CAACTTAATG ATGCTAAATC AGAATCTCGA CCTGTCCATG ACAATGAACC TCGAGCGCTT 
    AGAACCAAAT TTAAGGGAAA CAAAGACAAA TCAAAAGTAA AGGATGAAAA GAATAATATC 
    GATAATGTCT CTGAGGGACC AGTGGAACCA AAAAGGTTGC GCAGAATACG TCAAAAAAGG 
    GCAGTGTTTA ATAACATTTC AGGCATTTCA TCCCCGGCAG TGCTGGACAC TGCTGCTGCA 
    AAGCAAGAAA GAAGAAGTGG TACTGTTTGG TTTTCATTAT TGGCTTCTGA ACAGGAAGGA 
    GAAGCACCCT TGCCACAAAT TCCTTCAAGT TACTTAAGGC TAAAGGATGG AAATGTACCT 
    GTTTCTTTCA TCCAGAAGTA CTTGATGAAG AAGCTAGACC TCGCTAGTGA AGCTGAGGTT 
    GAGATCAGAT GCATGGGAAG ACCGGTGATC CCTACATTAC TATTGTATAA TTTAGTTGAT 
    CAGTGGCTAC AAACAGTGCC GAAGACTGAG CAAGTACCAG TAACTGCTGG TTTCTCGGCA 
    AAGGATTATG TGATGGTGCT TGCCTACGCT CGAAAGGTCC CAAACCAATA A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002302072.1
    CDS1..1311
    Translation

    Target ORF information:

    RefSeq Version XM_002302036.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa zinc finger family protein (POPTR_0002s04500g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002302036.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    ATGGGAAATC AGAATCATCA GCGTCATCAT CAGGTGGTGA AAGTGAGGAG AGAAACGATT 
    GCAGCATGCA TGACATGTCT TCTCTGCAAT AAGTTACTTA GAGATGCCAC CACCATATCT 
    GAATGTCTGC ATACGTTTTG CAGGAAGTGT ATATATCGGA GGATATCAAA TGAAGGATTA 
    GATAGCTGCC CAATATGCAA CATCAATCTG GGCTGTGTTC CTTTGGAAAA ATTAAGGCCA 
    GACCACAATT TGCAAGATGT GAGGTCCAAG ATTTTCCCAT ACAAAAAAAG AAAGGTAGAG 
    GCACCTGAAG TTGCAGAGTC AGTTGCATTA CCAGTTACTA GAAGAAAGGA AAGGTCGCTC 
    TCATCATTGG TGGTCTGCAC TCCTAAAGTT TCCACGCACA CTACTACAAC AGGAAGAAGA 
    ACGAAACCTT TTCCAAGAAA GGCTGCTGCT TTACGAGGTA CCAATTTTTC CATTGAAAAA 
    CCCAATAACA AGGAACATGT TCCTGTTGAA GATAGTCCAG AGAGCTCAAG TTCACCCGAA 
    ACTCTGAAAA AACCTAATCA GAACATAAAG CAGAATTCTC CCTGTACTGA ACCCAGCCAA 
    CCTGATCCTG ATGAAGCAGA GAATGGGACT GAACCAAGGG ATGGGAAATC AGATCTCTGG 
    CAACCTTTAA ATTTTTTGGT GGAAGTTGCG AACAGAACCA AGTCATTCAA GTCTAGTCCA 
    CAACTTAATG ATGCTAAATC AGAATCTCGA CCTGTCCATG ACAATGAACC TCGAGCGCTT 
    AGAACCAAAT TTAAGGGAAA CAAAGACAAA TCAAAAGTAA AGGATGAAAA GAATAATATC 
    GATAATGTCT CTGAGGGACC AGTGGAACCA AAAAGGTTGC GCAGAATACG TCAAAAAAGG 
    GCAGTGTTTA ATAACATTTC AGGCATTTCA TCCCCGGCAG TGCTGGACAC TGCTGCTGCA 
    AAGCAAGAAA GAAGAAGTGG TACTGTTTGG TTTTCATTAT TGGCTTCTGA ACAGGAAGGA 
    GAAGCACCCT TGCCACAAAT TCCTTCAAGT TACTTAAGGC TAAAGGATGG AAATGTACCT 
    GTTTCTTTCA TCCAGAAGTA CTTGATGAAG AAGCTAGACC TCGCTAGTGA AGCTGAGGTT 
    GAGATCAGAT GCATGGGAAG ACCGGTGATC CCTACATTAC TATTGTATAA TTTAGTTGAT 
    CAGTGGCTAC AAACAGTGCC GAAGACTGAG CAAGTACCAG TAACTGCTGG TTTCTCGGCA 
    AAGGATTATG TGATGGTGCT TGCCTACGCT CGAAAGGTCC CAAACCAATA A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,D?jardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasj?rvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Lepl? JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouz? P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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