ORF » Species Summary » Populus trichocarpa » POPTR_0009s16910g cDNA ORF clone

POPTR_0009s16910g cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa)

The following POPTR_0009s16910g gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the POPTR_0009s16910g cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa21196 XM_002312763.3
Latest version!		 Populus trichocarpa amino acid transporter AVT3B (LOC7474892), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00
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OPa21196 XM_002312763.2 Populus trichocarpa amino acid transporter family protein (POPTR_0009s16910g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00
Hide Old Accession Versions >>

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    POPTR_0009s16910g ( XM_002312763.3 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_002312799.1 Populus trichocarpa amino acid transporter AVT3B (LOC7474892), mRNA.
    Price & Availability↑
    CloneID OPa21196
    Clone ID Related Accession (Same CDS sequence) XM_002312763.3 , XM_002312763.2
    Accession Version XM_002312763.3 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1287bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2018-04-08
    Organism Populus trichocarpa(black cottonwood)
    Product amino acid transporter AVT3B
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037293.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_002312763.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    ATGGGATTTG GGAGGAAAAA AGCATCCTCA TCAGCAAAAA CTTTTCCACC GAGAGAAGAC 
    ACACCTCTCA TAGCCAAGTC CACGCCTTTA TCATCTCAAT CGAAGACTTT TGCAAATGTC 
    TTCATTGCTA TTGTCGGTGC TGGTGTTCTT GGTCTCCCTT ATGCTTTCAA ACGCACAGGT 
    TGGCTAATGA GTCTTATTAT GCTTTTCTCT GTTGCTGGCT TAACTCATTA TTGTATGATG 
    TTGTTAGTCA ATACTCGTGG AAAGCTTCAA TCTTTTTCTG GTGGATTCTC AAAGATTACC 
    TCTTTTGGTG ATGTGGGTTT CACTGTTTGT GGTTCTATTG GGAGGTTTGT TGTTGATGTT 
    ATGATTGTCT TGTCACAAGC TGGATTTTGT ATTGGTTATT TGATATTCAT TGCTAATACT 
    TTGGCTAATC TATTCAATTC GCCATCACCT AATGGCCTGG CTTCTCAAAT TCTGGCCCTT 
    TCAATGTCAG CTAAGAGTTG GTATATGTGG GGTTGTTTTC CTTTTCAGTT GGGGTTGAAT 
    TCTATTGCAA CGTTGACCCA TTTGGCTCCT CTGAGTATTT TTGCCGATGT TGTTGATCTT 
    GCTGCCATGG GAGTGGTGAT TGTTAAGGAT GTTTTTATAA TGATGGAAAA TAGGGCTGAA 
    GTTAGAGCAT TTGGAGGTTT GTCTGTGTTT TTCTATGGGA TGGGTGTGGC TGTTTATGCG 
    TTTGAAGGGA TTGGCATGGT TTTGCCAATA GAATCTGAAA TGAGAGAGAG GGAAAAGTTT 
    GGGAGAATCC TAGGGCTGAG CATGGGGCTT ATTTCAGTGA TATATGGAGC TTTTGGCGTG 
    CTGGGTTACT TTGCTTTTGG AAATGATACT CAGGATATTA TCACTGCTAA TTTAGGGCCT 
    GGACTCATTA GCCTCTTGGT TCAATTGGGT CTTTGTATTA ACCTGTTCTT TACATTTCCT 
    TTGATGATGA ACCCTGTTTA TGAGATACTG GAGAGAAGGT TTTGGGGTGG AAGGTATTGT 
    TTGTGGCTTA GATGGGTATC CGTTTTGTTG GTTACTTTGG TGGCTCTAAT GGTGCCGAAC 
    TTTGCCGATT TCATGTCCTT GGTGGGGAGC AGTGTATGCT GTGGGCTGGG ATTTGTTTTG 
    CCAGCTTTGT TTCACCTGCT CGTGTTCAAG GAGGAGATGA GCTGGAAAGG GTGGAGTATT 
    GATGTAGGGA TTGTGGCCTT AGGCCTTGTT CTTGCTGTTT CTGGGACATG GTATGCTCTC 
    ATGGAGATCT TTGCTGTCAA GGTATAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002312799.1
    CDS223..1509
    Translation

    Target ORF information:

    RefSeq Version XM_002312763.3
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa amino acid transporter AVT3B (LOC7474892), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002312763.3

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    ATGGGATTTG GGAGGAAAAA AGCATCCTCA TCAGCAAAAA CTTTTCCACC GAGAGAAGAC 
    ACACCTCTCA TAGCCAAGTC CACGCCTTTA TCATCTCAAT CGAAGACTTT TGCAAATGTC 
    TTCATTGCTA TTGTCGGTGC TGGTGTTCTT GGTCTCCCTT ATGCTTTCAA ACGCACAGGT 
    TGGCTAATGA GTCTTATTAT GCTTTTCTCT GTTGCTGGCT TAACTCATTA TTGTATGATG 
    TTGTTAGTCA ATACTCGTGG AAAGCTTCAA TCTTTTTCTG GTGGATTCTC AAAGATTACC 
    TCTTTTGGTG ATGTGGGTTT CACTGTTTGT GGTTCTATTG GGAGGTTTGT TGTTGATGTT 
    ATGATTGTCT TGTCACAAGC TGGATTTTGT ATTGGTTATT TGATATTCAT TGCTAATACT 
    TTGGCTAATC TATTCAATTC GCCATCACCT AATGGCCTGG CTTCTCAAAT TCTGGCCCTT 
    TCAATGTCAG CTAAGAGTTG GTATATGTGG GGTTGTTTTC CTTTTCAGTT GGGGTTGAAT 
    TCTATTGCAA CGTTGACCCA TTTGGCTCCT CTGAGTATTT TTGCCGATGT TGTTGATCTT 
    GCTGCCATGG GAGTGGTGAT TGTTAAGGAT GTTTTTATAA TGATGGAAAA TAGGGCTGAA 
    GTTAGAGCAT TTGGAGGTTT GTCTGTGTTT TTCTATGGGA TGGGTGTGGC TGTTTATGCG 
    TTTGAAGGGA TTGGCATGGT TTTGCCAATA GAATCTGAAA TGAGAGAGAG GGAAAAGTTT 
    GGGAGAATCC TAGGGCTGAG CATGGGGCTT ATTTCAGTGA TATATGGAGC TTTTGGCGTG 
    CTGGGTTACT TTGCTTTTGG AAATGATACT CAGGATATTA TCACTGCTAA TTTAGGGCCT 
    GGACTCATTA GCCTCTTGGT TCAATTGGGT CTTTGTATTA ACCTGTTCTT TACATTTCCT 
    TTGATGATGA ACCCTGTTTA TGAGATACTG GAGAGAAGGT TTTGGGGTGG AAGGTATTGT 
    TTGTGGCTTA GATGGGTATC CGTTTTGTTG GTTACTTTGG TGGCTCTAAT GGTGCCGAAC 
    TTTGCCGATT TCATGTCCTT GGTGGGGAGC AGTGTATGCT GTGGGCTGGG ATTTGTTTTG 
    CCAGCTTTGT TTCACCTGCT CGTGTTCAAG GAGGAGATGA GCTGGAAAGG GTGGAGTATT 
    GATGTAGGGA TTGTGGCCTT AGGCCTTGTT CTTGCTGTTT CTGGGACATG GTATGCTCTC 
    ATGGAGATCT TTGCTGTCAA GGTATAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    POPTR_0009s16910g ( XM_002312763.2 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_002312799.1 Populus trichocarpa amino acid transporter family protein (POPTR_0009s16910g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa21196
    Clone ID Related Accession (Same CDS sequence) XM_002312763.3 , XM_002312763.2
    Accession Version XM_002312763.2 Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1287bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2013-12-30
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product amino acid transporter family protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008475). On Dec 16, 2013 this sequence version replaced XM_002312763.1. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    ATGGGATTTG GGAGGAAAAA AGCATCCTCA TCAGCAAAAA CTTTTCCACC GAGAGAAGAC 
    ACACCTCTCA TAGCCAAGTC CACGCCTTTA TCATCTCAAT CGAAGACTTT TGCAAATGTC 
    TTCATTGCTA TTGTCGGTGC TGGTGTTCTT GGTCTCCCTT ATGCTTTCAA ACGCACAGGT 
    TGGCTAATGA GTCTTATTAT GCTTTTCTCT GTTGCTGGCT TAACTCATTA TTGTATGATG 
    TTGTTAGTCA ATACTCGTGG AAAGCTTCAA TCTTTTTCTG GTGGATTCTC AAAGATTACC 
    TCTTTTGGTG ATGTGGGTTT CACTGTTTGT GGTTCTATTG GGAGGTTTGT TGTTGATGTT 
    ATGATTGTCT TGTCACAAGC TGGATTTTGT ATTGGTTATT TGATATTCAT TGCTAATACT 
    TTGGCTAATC TATTCAATTC GCCATCACCT AATGGCCTGG CTTCTCAAAT TCTGGCCCTT 
    TCAATGTCAG CTAAGAGTTG GTATATGTGG GGTTGTTTTC CTTTTCAGTT GGGGTTGAAT 
    TCTATTGCAA CGTTGACCCA TTTGGCTCCT CTGAGTATTT TTGCCGATGT TGTTGATCTT 
    GCTGCCATGG GAGTGGTGAT TGTTAAGGAT GTTTTTATAA TGATGGAAAA TAGGGCTGAA 
    GTTAGAGCAT TTGGAGGTTT GTCTGTGTTT TTCTATGGGA TGGGTGTGGC TGTTTATGCG 
    TTTGAAGGGA TTGGCATGGT TTTGCCAATA GAATCTGAAA TGAGAGAGAG GGAAAAGTTT 
    GGGAGAATCC TAGGGCTGAG CATGGGGCTT ATTTCAGTGA TATATGGAGC TTTTGGCGTG 
    CTGGGTTACT TTGCTTTTGG AAATGATACT CAGGATATTA TCACTGCTAA TTTAGGGCCT 
    GGACTCATTA GCCTCTTGGT TCAATTGGGT CTTTGTATTA ACCTGTTCTT TACATTTCCT 
    TTGATGATGA ACCCTGTTTA TGAGATACTG GAGAGAAGGT TTTGGGGTGG AAGGTATTGT 
    TTGTGGCTTA GATGGGTATC CGTTTTGTTG GTTACTTTGG TGGCTCTAAT GGTGCCGAAC 
    TTTGCCGATT TCATGTCCTT GGTGGGGAGC AGTGTATGCT GTGGGCTGGG ATTTGTTTTG 
    CCAGCTTTGT TTCACCTGCT CGTGTTCAAG GAGGAGATGA GCTGGAAAGG GTGGAGTATT 
    GATGTAGGGA TTGTGGCCTT AGGCCTTGTT CTTGCTGTTT CTGGGACATG GTATGCTCTC 
    ATGGAGATCT TTGCTGTCAA GGTATAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002312799.1
    CDS157..1443
    Translation

    Target ORF information:

    RefSeq Version XM_002312763.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa amino acid transporter family protein (POPTR_0009s16910g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002312763.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    ATGGGATTTG GGAGGAAAAA AGCATCCTCA TCAGCAAAAA CTTTTCCACC GAGAGAAGAC 
    ACACCTCTCA TAGCCAAGTC CACGCCTTTA TCATCTCAAT CGAAGACTTT TGCAAATGTC 
    TTCATTGCTA TTGTCGGTGC TGGTGTTCTT GGTCTCCCTT ATGCTTTCAA ACGCACAGGT 
    TGGCTAATGA GTCTTATTAT GCTTTTCTCT GTTGCTGGCT TAACTCATTA TTGTATGATG 
    TTGTTAGTCA ATACTCGTGG AAAGCTTCAA TCTTTTTCTG GTGGATTCTC AAAGATTACC 
    TCTTTTGGTG ATGTGGGTTT CACTGTTTGT GGTTCTATTG GGAGGTTTGT TGTTGATGTT 
    ATGATTGTCT TGTCACAAGC TGGATTTTGT ATTGGTTATT TGATATTCAT TGCTAATACT 
    TTGGCTAATC TATTCAATTC GCCATCACCT AATGGCCTGG CTTCTCAAAT TCTGGCCCTT 
    TCAATGTCAG CTAAGAGTTG GTATATGTGG GGTTGTTTTC CTTTTCAGTT GGGGTTGAAT 
    TCTATTGCAA CGTTGACCCA TTTGGCTCCT CTGAGTATTT TTGCCGATGT TGTTGATCTT 
    GCTGCCATGG GAGTGGTGAT TGTTAAGGAT GTTTTTATAA TGATGGAAAA TAGGGCTGAA 
    GTTAGAGCAT TTGGAGGTTT GTCTGTGTTT TTCTATGGGA TGGGTGTGGC TGTTTATGCG 
    TTTGAAGGGA TTGGCATGGT TTTGCCAATA GAATCTGAAA TGAGAGAGAG GGAAAAGTTT 
    GGGAGAATCC TAGGGCTGAG CATGGGGCTT ATTTCAGTGA TATATGGAGC TTTTGGCGTG 
    CTGGGTTACT TTGCTTTTGG AAATGATACT CAGGATATTA TCACTGCTAA TTTAGGGCCT 
    GGACTCATTA GCCTCTTGGT TCAATTGGGT CTTTGTATTA ACCTGTTCTT TACATTTCCT 
    TTGATGATGA ACCCTGTTTA TGAGATACTG GAGAGAAGGT TTTGGGGTGG AAGGTATTGT 
    TTGTGGCTTA GATGGGTATC CGTTTTGTTG GTTACTTTGG TGGCTCTAAT GGTGCCGAAC 
    TTTGCCGATT TCATGTCCTT GGTGGGGAGC AGTGTATGCT GTGGGCTGGG ATTTGTTTTG 
    CCAGCTTTGT TTCACCTGCT CGTGTTCAAG GAGGAGATGA GCTGGAAAGG GTGGAGTATT 
    GATGTAGGGA TTGTGGCCTT AGGCCTTGTT CTTGCTGTTT CTGGGACATG GTATGCTCTC 
    ATGGAGATCT TTGCTGTCAA GGTATAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,D?jardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasj?rvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Lepl? JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouz? P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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