ORF » Species Summary » Xenopus tropicalis » LOC100485004 cDNA ORF clone

LOC100485004 cDNA ORF clone, Xenopus tropicalis(tropical clawed frog)

The following LOC100485004 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC100485004 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OXa42850 XM_012957838.2
Latest version!		 Xenopus tropicalis E3 ubiquitin-protein ligase TRIM39-like (LOC100485004), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00
OXa52711 XM_012957838.3
Latest version!		 Xenopus tropicalis E3 ubiquitin-protein ligase TRIM39 (LOC100485004), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC100485004 ( XM_012957838.2 ) cDNA ORF clone, Xenopus tropicalis(tropical clawed frog) -> XP_012813292.2 Xenopus tropicalis E3 ubiquitin-protein ligase TRIM39-like (LOC100485004), mRNA.
    Price & Availability↑
    CloneID OXa42850
    Clone ID Related Accession (Same CDS sequence) XM_012957838.2
    Accession Version XM_012957838.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1479bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2016-09-07
    Organism Xenopus tropicalis(tropical clawed frog)
    Product E3 ubiquitin-protein ligase TRIM39-like
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030678.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 8, 2016 this sequence version replaced XM_012957838.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Xenopus tropicalis Annotation Release 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    ATGTGGCTAG AGCAGTGCCA GCTTCCTGAA TTAAAGATGG ATTCCGAGCC CACAACTGCA 
    TTTTTGTCGA GTTTAACAGG AGGAATGCAA GCAATGGCTA CAGCAAAGAG AAATCCAGTA 
    ACTGAGCTAA AGGAAGAACT GACGTGCCCT ATTTGCCTGG ATCACTTTAG TGAACCTGTT 
    TCTATTGAAT GTGGGCACAG TTTTTGCCGA GCCTGCATTA CCCGTACCTG GAGAGGAATT 
    CACAGCAACT TTGAATGTCC CCAGTGCAGA AACATATCCA GATGGAAATT TTTACGGCCT 
    AATCGTCTTG TGGAGAATAT GGTGGAAATA ACTGGACGAC TTGCTGCTAC CAAAATGTCT 
    CCAGTTAGTA AGAAGCAATG TGAAAAGCAC CAGGAACCAA TGAAACTCTT TTGTCAAGTG 
    GATGCAAAGG AAATTTGTTT GGTGTGCCGA GAGTCAGTGG AACATAGGAC CCATACTGTG 
    ATACCAGTGG AGGAGTCAAC TAGAGAGTTT AAGGTTCAGC TCAGAGATCG CCTTCACACA 
    TTAAGAAGAG AATGTGCAGC TATCTTGGAA ACAAAGTCTG AAGACAAGCA AAAAGTTGAA 
    AAACTTAAGA ATGAAATTGA GCAAAAACGT AGAATGCTCA CCTCTGAATT TGAAATCCTG 
    CGTCAGATTT TAGAAGATCA TGAAAGAGAA TTCAAAGAGC GTTTGGAGAA CATGGAGAGA 
    CTGATCATTA AAAGAACAAA TGAAAGGACC AGTAAGCTGA ATGAAAAACT GTCATCTCTG 
    CACGCACTCA TCTTAGATAT CGAGCAAAAT ATTCTCCCCT CGGCTCAAAC ATATCAGGAA 
    CCGAAATCTG CAGTGGGCAG GAATTCTGAA AATCTGCAGC TGTGTGATCC TAGGAAGAAG 
    CCTTCACGTG ATGGGACAAC ACCTGCACCT TTTTTTTACC TCAAGAGATT TAATGTTCCT 
    GTAACCTTGG ACCATAAAAC TGCCAATCCT AATCTCATTA TTTCTGGCAA TCGAAAAATC 
    ATCAGATACG AGGAGGATCC AAAGAATCTG GTCAATTATC CTGAAAGATT TGATATGAAA 
    CCTTGTGTCT TAGGAACCAC AGGATACCGA TCAGGGAAAC GGTACTGGGA AGTAGAAGTG 
    GGTGGTGGAA TATATTGGAG TGTTGGGGTT GCCATACAAT CTGTTCGCAG AAAAGGAGCC 
    TTTAGGATTG AGCCTTATGT TGGTGTCTGG GCCATTGGCT TACTCGGTAT GTATACTGAT 
    AGATACTATG CTTTCACCAG TCCTGACATA CTCTTGCACC CCAGGGACCG CCCTGTCATC 
    ATCGGTGTAT TTCTCAACTG CGAAGAGCAA CAGGTTTCCT TTTTCAATGC CGAAAGCTTT 
    GAGCATCTTT ACACTTTCCG TGATGTGCGT TCCCCTGATA AAATCTTCCC CTTCTTTTGT 
    GTTGGGGCAA TGGGAACAGA ACTGCGACTT GAAGCCTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_012813292.2
    CDS451..1929
    Translation

    Target ORF information:

    RefSeq Version XM_012957838.2
    Organism Xenopus tropicalis(tropical clawed frog)
    Definition Xenopus tropicalis E3 ubiquitin-protein ligase TRIM39-like (LOC100485004), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_012957838.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    ATGTGGCTAG AGCAGTGCCA GCTTCCTGAA TTAAAGATGG ATTCCGAGCC CACAACTGCA 
    TTTTTGTCGA GTTTAACAGG AGGAATGCAA GCAATGGCTA CAGCAAAGAG AAATCCAGTA 
    ACTGAGCTAA AGGAAGAACT GACGTGCCCT ATTTGCCTGG ATCACTTTAG TGAACCTGTT 
    TCTATTGAAT GTGGGCACAG TTTTTGCCGA GCCTGCATTA CCCGTACCTG GAGAGGAATT 
    CACAGCAACT TTGAATGTCC CCAGTGCAGA AACATATCCA GATGGAAATT TTTACGGCCT 
    AATCGTCTTG TGGAGAATAT GGTGGAAATA ACTGGACGAC TTGCTGCTAC CAAAATGTCT 
    CCAGTTAGTA AGAAGCAATG TGAAAAGCAC CAGGAACCAA TGAAACTCTT TTGTCAAGTG 
    GATGCAAAGG AAATTTGTTT GGTGTGCCGA GAGTCAGTGG AACATAGGAC CCATACTGTG 
    ATACCAGTGG AGGAGTCAAC TAGAGAGTTT AAGGTTCAGC TCAGAGATCG CCTTCACACA 
    TTAAGAAGAG AATGTGCAGC TATCTTGGAA ACAAAGTCTG AAGACAAGCA AAAAGTTGAA 
    AAACTTAAGA ATGAAATTGA GCAAAAACGT AGAATGCTCA CCTCTGAATT TGAAATCCTG 
    CGTCAGATTT TAGAAGATCA TGAAAGAGAA TTCAAAGAGC GTTTGGAGAA CATGGAGAGA 
    CTGATCATTA AAAGAACAAA TGAAAGGACC AGTAAGCTGA ATGAAAAACT GTCATCTCTG 
    CACGCACTCA TCTTAGATAT CGAGCAAAAT ATTCTCCCCT CGGCTCAAAC ATATCAGGAA 
    CCGAAATCTG CAGTGGGCAG GAATTCTGAA AATCTGCAGC TGTGTGATCC TAGGAAGAAG 
    CCTTCACGTG ATGGGACAAC ACCTGCACCT TTTTTTTACC TCAAGAGATT TAATGTTCCT 
    GTAACCTTGG ACCATAAAAC TGCCAATCCT AATCTCATTA TTTCTGGCAA TCGAAAAATC 
    ATCAGATACG AGGAGGATCC AAAGAATCTG GTCAATTATC CTGAAAGATT TGATATGAAA 
    CCTTGTGTCT TAGGAACCAC AGGATACCGA TCAGGGAAAC GGTACTGGGA AGTAGAAGTG 
    GGTGGTGGAA TATATTGGAG TGTTGGGGTT GCCATACAAT CTGTTCGCAG AAAAGGAGCC 
    TTTAGGATTG AGCCTTATGT TGGTGTCTGG GCCATTGGCT TACTCGGTAT GTATACTGAT 
    AGATACTATG CTTTCACCAG TCCTGACATA CTCTTGCACC CCAGGGACCG CCCTGTCATC 
    ATCGGTGTAT TTCTCAACTG CGAAGAGCAA CAGGTTTCCT TTTTCAATGC CGAAAGCTTT 
    GAGCATCTTT ACACTTTCCG TGATGTGCGT TCCCCTGATA AAATCTTCCC CTTCTTTTGT 
    GTTGGGGCAA TGGGAACAGA ACTGCGACTT GAAGCCTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC100485004 ( XM_012957838.3 ) cDNA ORF clone, Xenopus tropicalis(tropical clawed frog) -> XP_012813292.3 Xenopus tropicalis E3 ubiquitin-protein ligase TRIM39 (LOC100485004), mRNA.
    Price & Availability↑
    CloneID OXa52711
    Clone ID Related Accession (Same CDS sequence) XM_012957838.3
    Accession Version XM_012957838.3 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1479bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2019-12-17
    Organism Xenopus tropicalis(tropical clawed frog)
    Product E3 ubiquitin-protein ligase TRIM39
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030678.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Dec 18, 2019 this sequence version replaced XM_012957838.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Xenopus tropicalis Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    ATGTGGCTAG AGCAGTGCCA GCTTCCTGAA TTAAAGATGG ATTCCGAGCC CACAACTGCA 
    TTTTTGTCGA GTTTAACAGG AGGAATGCAA GCAATGGCTA CAGCAAAGAG AAATCCAGTA 
    ACTGAGCTAA AGGAAGAACT GACGTGCCCT ATTTGCCTGG ATCACTTTAG TGAACCTGTT 
    TCTATTGAAT GTGGGCACAG TTTTTGCCGA GCCTGCATTA CCCGTACCTG GAGAGGAATT 
    CACAGCAACT TTGAATGTCC CCAGTGCAGA AACATATCCA GATGGAAATT TTTACGGCCT 
    AATCGTCTTG TGGAGAATAT GGTGGAAATA ACTGGACGAC TTGCTGCTAC CAAAATGTCT 
    CCAGTTAGTA AGAAGCAATG TGAAAAGCAC CAGGAACCAA TGAAACTCTT TTGTCAAGTG 
    GATGCAAAGG AAATTTGTTT GGTGTGCCGA GAGTCAGTGG AACATAGGAC CCATACTGTG 
    ATACCAGTGG AGGAGTCAAC TAGAGAGTTT AAGGTTCAGC TCAGAGATCG CCTTCACACA 
    TTAAGAAGAG AATGTGCAGC TATCTTGGAA ACAAAGTCTG AAGACAAGCA AAAAGTTGAA 
    AAACTTAAGA ATGAAATTGA GCAAAAACGT AGAATGCTCA CCTCTGAATT TGAAATCCTG 
    CGTCAGATTT TAGAAGATCA TGAAAGAGAA TTCAAAGAGC GTTTGGAGAA CATGGAGAGA 
    CTGATCATTA AAAGAACAAA TGAAAGGACC AGTAAGCTGA ATGAAAAACT GTCATCTCTG 
    CACGCACTCA TCTTAGATAT CGAGCAAAAT ATTCTCCCCT CGGCTCAAAC ATATCAGGAA 
    CCGAAATCTG CGGTGGGCAG GAATTCTGAA AATCTGCAGC TGTGTGATCC TAGGAAGAAG 
    CCTTCACGTG ATGGGACAAC ACCTGCACCT TTTTTTTACC TCAAGAGATT TAATGTTCCT 
    GTAACCTTGG ACCATAAAAC TGCCAATCCT AATCTCATTA TTTCTGGCAA TCGAAAAATC 
    ATCAGATACG AGGAGGATCC AAAGAATCTG GTCAATTATC CTGAAAGATT TGATATGAAA 
    CCTTGTGTCT TAGGAACCAC AGGATACCGA TCAGGGAAAC GGTACTGGGA AGTAGAAGTG 
    GGTGGTGGAA TATATTGGAG TGTTGGGGTT GCCATACAAT CTGTTCGCAG AAAAGGAGCC 
    TTTAGGATTG AGCCTTATGT TGGTGTCTGG GCCATTGGCT TACTCGGTAT GTATACTGAT 
    AGATACTATG CTTTCACCAG TCCTGACATA CTCTTGCACC CCAGGGACCG CCCTGTCGTC 
    ATCGGTGTAT TTCTCAACTG CGAAGAGCAA CAGGTTTCCT TTTTCAATGC CGAAAGCTTT 
    GAGCATCTTT ACACTTTCCG TGATGTGCGT TCCCCTGATA AAATCTTCCC CTTCTTTTGT 
    GTTGGGGCAA TGGGAACAGA ACTGCGACTT GAAGCCTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_012813292.3
    CDS89..1567
    Translation

    Target ORF information:

    RefSeq Version XM_012957838.3
    Organism Xenopus tropicalis(tropical clawed frog)
    Definition Xenopus tropicalis E3 ubiquitin-protein ligase TRIM39 (LOC100485004), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_012957838.3

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    ATGTGGCTAG AGCAGTGCCA GCTTCCTGAA TTAAAGATGG ATTCCGAGCC CACAACTGCA 
    TTTTTGTCGA GTTTAACAGG AGGAATGCAA GCAATGGCTA CAGCAAAGAG AAATCCAGTA 
    ACTGAGCTAA AGGAAGAACT GACGTGCCCT ATTTGCCTGG ATCACTTTAG TGAACCTGTT 
    TCTATTGAAT GTGGGCACAG TTTTTGCCGA GCCTGCATTA CCCGTACCTG GAGAGGAATT 
    CACAGCAACT TTGAATGTCC CCAGTGCAGA AACATATCCA GATGGAAATT TTTACGGCCT 
    AATCGTCTTG TGGAGAATAT GGTGGAAATA ACTGGACGAC TTGCTGCTAC CAAAATGTCT 
    CCAGTTAGTA AGAAGCAATG TGAAAAGCAC CAGGAACCAA TGAAACTCTT TTGTCAAGTG 
    GATGCAAAGG AAATTTGTTT GGTGTGCCGA GAGTCAGTGG AACATAGGAC CCATACTGTG 
    ATACCAGTGG AGGAGTCAAC TAGAGAGTTT AAGGTTCAGC TCAGAGATCG CCTTCACACA 
    TTAAGAAGAG AATGTGCAGC TATCTTGGAA ACAAAGTCTG AAGACAAGCA AAAAGTTGAA 
    AAACTTAAGA ATGAAATTGA GCAAAAACGT AGAATGCTCA CCTCTGAATT TGAAATCCTG 
    CGTCAGATTT TAGAAGATCA TGAAAGAGAA TTCAAAGAGC GTTTGGAGAA CATGGAGAGA 
    CTGATCATTA AAAGAACAAA TGAAAGGACC AGTAAGCTGA ATGAAAAACT GTCATCTCTG 
    CACGCACTCA TCTTAGATAT CGAGCAAAAT ATTCTCCCCT CGGCTCAAAC ATATCAGGAA 
    CCGAAATCTG CGGTGGGCAG GAATTCTGAA AATCTGCAGC TGTGTGATCC TAGGAAGAAG 
    CCTTCACGTG ATGGGACAAC ACCTGCACCT TTTTTTTACC TCAAGAGATT TAATGTTCCT 
    GTAACCTTGG ACCATAAAAC TGCCAATCCT AATCTCATTA TTTCTGGCAA TCGAAAAATC 
    ATCAGATACG AGGAGGATCC AAAGAATCTG GTCAATTATC CTGAAAGATT TGATATGAAA 
    CCTTGTGTCT TAGGAACCAC AGGATACCGA TCAGGGAAAC GGTACTGGGA AGTAGAAGTG 
    GGTGGTGGAA TATATTGGAG TGTTGGGGTT GCCATACAAT CTGTTCGCAG AAAAGGAGCC 
    TTTAGGATTG AGCCTTATGT TGGTGTCTGG GCCATTGGCT TACTCGGTAT GTATACTGAT 
    AGATACTATG CTTTCACCAG TCCTGACATA CTCTTGCACC CCAGGGACCG CCCTGTCGTC 
    ATCGGTGTAT TTCTCAACTG CGAAGAGCAA CAGGTTTCCT TTTTCAATGC CGAAAGCTTT 
    GAGCATCTTT ACACTTTCCG TGATGTGCGT TCCCCTGATA AAATCTTCCC CTTCTTTTGT 
    GTTGGGGCAA TGGGAACAGA ACTGCGACTT GAAGCCTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

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