| Gene Symbol | GATA6 |
| Entrez Gene ID | 397600 |
| Full Name | GATA binding protein 6 |
| Synonyms | GATA-6 |
| Gene Type | protein-coding |
| Organism | Sus scrofa(Pig) |
ORF » Species Summary » Sus scrofa » GATA6 cDNA ORF clone
| Gene Symbol | GATA6 |
| Entrez Gene ID | 397600 |
| Full Name | GATA binding protein 6 |
| Synonyms | GATA-6 |
| Gene Type | protein-coding |
| Organism | Sus scrofa(Pig) |
| mRNA | Protein | Name |
|---|---|---|
| XM_005656113.3 | XP_005656170.1 | transcription factor GATA-6 isoform X1 |
| XM_021093576.1 | XP_020949235.1 | transcription factor GATA-6 isoform X2 |
| XM_005656114.2 | XP_005656171.1 | transcription factor GATA-6 isoform X1 |
| XM_005656112.2 | XP_005656169.1 | transcription factor GATA-6 isoform X1 |
| XM_005656112.3 | XP_005656169.1 | transcription factor GATA-6 isoform X1 |
| XM_005656114.3 | XP_005656171.1 | transcription factor GATA-6 isoform X1 |
| NM_214328.2 | NP_999493.2 | transcription factor GATA-6 |
| XM_005656113.2 | XP_005656170.1 | transcription factor GATA-6 isoform X1 |
GATA depletion impacts insulin-like growth factor 1 mRNA and protein levels in luteinizing porcine granulosa cells.
LaVoie HA, Kordus RJ, Nguyen JB, Barth JL, Hui YY
Biology of reproduction83(6)1015-26(2010 Dec)
GATA4 reduction enhances 3',5'-cyclic adenosine 5'-monophosphate-stimulated steroidogenic acute regulatory protein messenger ribonucleic acid and progesterone production in luteinized porcine granulosa cells.
Hui YY, Lavoie HA
Endocrinology149(11)5557-67(2008 Nov)
Porcine transcriptome analysis based on 97 non-normalized cDNA libraries and assembly of 1,021,891 expressed sequence tags.
Gorodkin J, Cirera S, Hedegaard J, Gilchrist MJ, Panitz F, J?rgensen C, Scheibye-Knudsen K, Arvin T, Lumholdt S, Sawera M, Green T, Nielsen BJ, Havgaard JH, Rosenkilde C, Wang J, Li H, Li R, Liu B, Hu S, Dong W, Li W, Yu J, Wang J, Staefeldt HH, Wernersson R, Madsen LB, Thomsen B, Hornsh?j H, Bujie Z, Wang X, Wang X, Bolund L, Brunak S, Yang H, Bendixen C, Fredholm M
Genome biology8(4)R45(2007)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
investigation of genes regulated by GATA6, GATA4, and both in combination: studies in granulosa cells primed for luteinization
Title: GATA depletion impacts insulin-like growth factor 1 mRNA and protein levels in luteinizing porcine granulosa cells.
The altered ratio of GATA4 to GATA6 after ovulation may allow GATA6 to enhance STAR mRNA accumulation.
Title: GATA4 reduction enhances 3',5'-cyclic adenosine 5'-monophosphate-stimulated steroidogenic acute regulatory protein messenger ribonucleic acid and progesterone production in luteinized porcine granulosa cells.
The following GATA6 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the GATA6 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
| CloneID | OSe30562 | |
| Clone ID Related Accession (Same CDS sequence) | NM_214328.2 | |
| Accession Version | NM_214328.2 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1779bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2019-12-21 | |
| Organism | Sus scrofa(pig) | |
| Product | transcription factor GATA-6 | |
| Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from EW507902.2 and AF295687.1. On Aug 16, 2011 this sequence version replaced NM_214328.1. Sequence Note: This RefSeq record was created from transcripts that are potentially from different strains because no single transcript from the same strain was available for the full length of the gene. The extent of this transcript is supported by transcript alignments and orthologous data. ##Evidence-Data-START## Transcript exon combination :: AF295687.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2040861, SAMEA2040929 [ECO:0000348] ##Evidence-Data-END## | |
1 | ATGGCCTTGA CTGACGGCGG CTGGTGTCTG CCAAAGCGCT TAGGGGCCGC GGCTGCGGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | NP_999493.2 |
| CDS | 38..1816 |
| Translation |
Target ORF information:
Target ORF information:
|
NM_214328.2 |
1 | ATGGCCTTGA CTGACGGCGG CTGGTGTCTG CCAAAGCGCT TAGGGGCCGC GGCTGCGGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OSe12619 | |
| Clone ID Related Accession (Same CDS sequence) | XM_005656113.3 , XM_005656114.2 , XM_005656112.2 , XM_005656112.3 , XM_005656114.3 , XM_005656113.2 | |
| Accession Version | XM_005656113.3 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1779bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2017-05-12 | |
| Organism | Sus scrofa(pig) | |
| Product | transcription factor GATA-6 isoform X1 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010448.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On May 13, 2017 this sequence version replaced XM_005656113.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGGCCTTGA CTGACGGCGG CTGGTGTCTG CCAAAGCGCT TAGGGGCCGC GGCTGCGGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_005656170.1 |
| CDS | 690..2468 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_005656113.3 |
1 | ATGGCCTTGA CTGACGGCGG CTGGTGTCTG CCAAAGCGCT TAGGGGCCGC GGCTGCGGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OSe12619 | |
| Clone ID Related Accession (Same CDS sequence) | XM_005656113.3 , XM_005656114.2 , XM_005656112.2 , XM_005656112.3 , XM_005656114.3 , XM_005656113.2 | |
| Accession Version | XM_005656114.2 | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1779bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2015-09-10 | |
| Organism | Sus scrofa(Pig) | |
| Product | transcription factor GATA-6 isoform X1 | |
| Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003535035.2) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 11, 2015 this sequence version replaced XM_005656114.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGGCCTTGA CTGACGGCGG CTGGTGTCTG CCAAAGCGCT TAGGGGCCGC GGCTGCGGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_005656171.1 |
| CDS | 215..1993 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_005656114.2 |
1 | ATGGCCTTGA CTGACGGCGG CTGGTGTCTG CCAAAGCGCT TAGGGGCCGC GGCTGCGGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OSe12619 | |
| Clone ID Related Accession (Same CDS sequence) | XM_005656113.3 , XM_005656114.2 , XM_005656112.2 , XM_005656112.3 , XM_005656114.3 , XM_005656113.2 | |
| Accession Version | XM_005656112.2 | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1779bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2015-09-10 | |
| Organism | Sus scrofa(Pig) | |
| Product | transcription factor GATA-6 isoform X1 | |
| Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003535035.2) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 11, 2015 this sequence version replaced XM_005656112.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGGCCTTGA CTGACGGCGG CTGGTGTCTG CCAAAGCGCT TAGGGGCCGC GGCTGCGGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_005656169.1 |
| CDS | 172..1950 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_005656112.2 |
1 | ATGGCCTTGA CTGACGGCGG CTGGTGTCTG CCAAAGCGCT TAGGGGCCGC GGCTGCGGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OSe12619 | |
| Clone ID Related Accession (Same CDS sequence) | XM_005656113.3 , XM_005656114.2 , XM_005656112.2 , XM_005656112.3 , XM_005656114.3 , XM_005656113.2 | |
| Accession Version | XM_005656112.3 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1779bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2017-05-12 | |
| Organism | Sus scrofa(pig) | |
| Product | transcription factor GATA-6 isoform X1 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010448.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On May 13, 2017 this sequence version replaced XM_005656112.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGGCCTTGA CTGACGGCGG CTGGTGTCTG CCAAAGCGCT TAGGGGCCGC GGCTGCGGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_005656169.1 |
| CDS | 270..2048 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_005656112.3 |
1 | ATGGCCTTGA CTGACGGCGG CTGGTGTCTG CCAAAGCGCT TAGGGGCCGC GGCTGCGGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OSe12619 | |
| Clone ID Related Accession (Same CDS sequence) | XM_005656113.3 , XM_005656114.2 , XM_005656112.2 , XM_005656112.3 , XM_005656114.3 , XM_005656113.2 | |
| Accession Version | XM_005656114.3 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1779bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2017-05-12 | |
| Organism | Sus scrofa(pig) | |
| Product | transcription factor GATA-6 isoform X1 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010448.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On May 13, 2017 this sequence version replaced XM_005656114.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGGCCTTGA CTGACGGCGG CTGGTGTCTG CCAAAGCGCT TAGGGGCCGC GGCTGCGGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_005656171.1 |
| CDS | 391..2169 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_005656114.3 |
1 | ATGGCCTTGA CTGACGGCGG CTGGTGTCTG CCAAAGCGCT TAGGGGCCGC GGCTGCGGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OSe12619 | |
| Clone ID Related Accession (Same CDS sequence) | XM_005656113.3 , XM_005656114.2 , XM_005656112.2 , XM_005656112.3 , XM_005656114.3 , XM_005656113.2 | |
| Accession Version | XM_005656113.2 | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1779bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2015-09-10 | |
| Organism | Sus scrofa(Pig) | |
| Product | transcription factor GATA-6 isoform X1 | |
| Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003535035.2) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 11, 2015 this sequence version replaced XM_005656113.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGGCCTTGA CTGACGGCGG CTGGTGTCTG CCAAAGCGCT TAGGGGCCGC GGCTGCGGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_005656170.1 |
| CDS | 149..1927 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_005656113.2 |
1 | ATGGCCTTGA CTGACGGCGG CTGGTGTCTG CCAAAGCGCT TAGGGGCCGC GGCTGCGGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OSe250504 | |
| Clone ID Related Accession (Same CDS sequence) | XM_021093576.1 | |
| Accession Version | XM_021093576.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1623bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2017-05-12 | |
| Organism | Sus scrofa(pig) | |
| Product | transcription factor GATA-6 isoform X2 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010448.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGGCCTTGA CTGACGGCGG CTGGTGTCTG CCAAAGCGCT TAGGGGCCGC GGCTGCGGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_020949235.1 |
| CDS | 270..1892 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_021093576.1 |
1 | ATGGCCTTGA CTGACGGCGG CTGGTGTCTG CCAAAGCGCT TAGGGGCCGC GGCTGCGGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
GATA depletion impacts insulin-like growth factor 1 mRNA and protein levels in luteinizing porcine granulosa cells. |
GATA4 reduction enhances 3',5'-cyclic adenosine 5'-monophosphate-stimulated steroidogenic acute regulatory protein messenger ribonucleic acid and progesterone production in luteinized porcine granulosa cells. |
Porcine transcriptome analysis based on 97 non-normalized cDNA libraries and assembly of 1,021,891 expressed sequence tags. |