Gene Symbol | ODF3B |
Entrez Gene ID | 100517096 |
Full Name | outer dense fiber of sperm tails 3B |
Gene Type | protein-coding |
Organism | Sus scrofa(pig) |
ORF » Species Summary » Sus scrofa » ODF3B cDNA ORF clone
Gene Symbol | ODF3B |
Entrez Gene ID | 100517096 |
Full Name | outer dense fiber of sperm tails 3B |
Gene Type | protein-coding |
Organism | Sus scrofa(pig) |
mRNA | Protein | Name |
---|---|---|
XM_005653167.1 | XP_005653224.1 | outer dense fiber protein 3B isoform X1 |
XM_005653167.2 | XP_005653224.1 | outer dense fiber protein 3B isoform X1 |
NM_001206375.1 | NP_001193304.1 | outer dense fiber protein 3B |
XM_013993921.1 | XP_013849375.1 | outer dense fiber protein 3B isoform X2 |
XM_021091042.1 | XP_020946701.1 | outer dense fiber protein 3B isoform X1 |
Porcine transcriptome analysis based on 97 non-normalized cDNA libraries and assembly of 1,021,891 expressed sequence tags.
Gorodkin J, Cirera S, Hedegaard J, Gilchrist MJ, Panitz F, J?rgensen C, Scheibye-Knudsen K, Arvin T, Lumholdt S, Sawera M, Green T, Nielsen BJ, Havgaard JH, Rosenkilde C, Wang J, Li H, Li R, Liu B, Hu S, Dong W, Li W, Yu J, Wang J, Staefeldt HH, Wernersson R, Madsen LB, Thomsen B, Hornsh?j H, Bujie Z, Wang X, Wang X, Bolund L, Brunak S, Yang H, Bendixen C, Fredholm M
Genome biology8(4)R45(2007)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following ODF3B gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the ODF3B cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OSe10651 | |
Clone ID Related Accession (Same CDS sequence) | XM_005653167.1 , XM_005653167.2 , NM_001206375.1 , XM_021091042.1 | |
Accession Version | NM_001206375.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 762bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-06-13 | |
Organism | Sus scrofa(pig) | |
Product | outer dense fiber protein 3B | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EW465602.2 and AEMK02000026.1. On Apr 23, 2011 this sequence version replaced XM_003126767.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. |
1 | ATGGGCTCTG ACGTCTGGGT TGGCCCTTGG CGGCCGCACC GGCCCCGCGG CCCCATTGCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001193304.1 |
CDS | 45..806 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001206375.1 |
1 | ATGGGCTCTG ACGTCTGGGT TGGCCCTTGG CGGCCGCACC GGCCCCGCGG CCCCATTGCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe10651 | |
Clone ID Related Accession (Same CDS sequence) | XM_005653167.1 , XM_005653167.2 , NM_001206375.1 , XM_021091042.1 | |
Accession Version | XM_005653167.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 762bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2015-09-10 | |
Organism | Sus scrofa(Pig) | |
Product | outer dense fiber protein 3B isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003300013.3) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGCTCTG ACGTCTGGGT TGGCCCTTGG CGGCCGCACC GGCCCCGCGG CCCCATTGCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005653224.1 |
CDS | 99..860 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005653167.1 |
1 | ATGGGCTCTG ACGTCTGGGT TGGCCCTTGG CGGCCGCACC GGCCCCGCGG CCCCATTGCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe10651 | |
Clone ID Related Accession (Same CDS sequence) | XM_005653167.1 , XM_005653167.2 , NM_001206375.1 , XM_021091042.1 | |
Accession Version | XM_005653167.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 762bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-05-12 | |
Organism | Sus scrofa(pig) | |
Product | outer dense fiber protein 3B isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010447.5) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 13, 2017 this sequence version replaced XM_005653167.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGCTCTG ACGTCTGGGT TGGCCCTTGG CGGCCGCACC GGCCCCGCGG CCCCATTGCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005653224.1 |
CDS | 148..909 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005653167.2 |
1 | ATGGGCTCTG ACGTCTGGGT TGGCCCTTGG CGGCCGCACC GGCCCCGCGG CCCCATTGCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe10651 | |
Clone ID Related Accession (Same CDS sequence) | XM_005653167.1 , XM_005653167.2 , NM_001206375.1 , XM_021091042.1 | |
Accession Version | XM_021091042.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 762bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-05-12 | |
Organism | Sus scrofa(pig) | |
Product | outer dense fiber protein 3B isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010447.5) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGCTCTG ACGTCTGGGT TGGCCCTTGG CGGCCGCACC GGCCCCGCGG CCCCATTGCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_020946701.1 |
CDS | 411..1172 |
Translation |
Target ORF information:
Target ORF information:
|
XM_021091042.1 |
1 | ATGGGCTCTG ACGTCTGGGT TGGCCCTTGG CGGCCGCACC GGCCCCGCGG CCCCATTGCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe36124 | |
Clone ID Related Accession (Same CDS sequence) | XM_013993921.1 | |
Accession Version | XM_013993921.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 663bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2015-09-10 | |
Organism | Sus scrofa(Pig) | |
Product | outer dense fiber protein 3B isoform X2 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003300013.3) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGGTCTG GGACTTGGGC CCGGGAGGGG CAGGAATCCA GACACCCCAC CCTGCCGTCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_013849375.1 |
CDS | 36..698 |
Translation |
Target ORF information:
Target ORF information:
|
XM_013993921.1 |
1 | ATGGGGTCTG GGACTTGGGC CCGGGAGGGG CAGGAATCCA GACACCCCAC CCTGCCGTCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Porcine transcriptome analysis based on 97 non-normalized cDNA libraries and assembly of 1,021,891 expressed sequence tags. |