| Gene Symbol | CD72 |
| Entrez Gene ID | 100038011 |
| Full Name | CD72 molecule |
| Gene Type | protein-coding |
| Organism | Sus scrofa(pig) |
| Genome |
ORF » Species Summary » Sus scrofa » CD72 cDNA ORF clone
| Gene Symbol | CD72 |
| Entrez Gene ID | 100038011 |
| Full Name | CD72 molecule |
| Gene Type | protein-coding |
| Organism | Sus scrofa(pig) |
| Genome |
| mRNA | Protein | Name |
|---|---|---|
| XM_005660185.2 | XP_005660242.1 | B-cell differentiation antigen CD72 isoform X1 |
| XM_021096459.1 | XP_020952118.1 | B-cell differentiation antigen CD72 isoform X1 |
| XM_021097074.1 | XP_020952733.1 | B-cell differentiation antigen CD72 isoform X2 |
| NM_001097493.1 | NP_001090962.1 | B-cell differentiation antigen CD72 |
| XM_005660185.3 | XP_005660242.1 | B-cell differentiation antigen CD72 isoform X3 |
Various domains of the B-cell regulatory molecule CD72 has diverged at different rates in mammals: cloning, transcription and mapping of porcine CD72.
Bie Petersen C, Nyg?rd AB, Fredholm M, Aasted B, Salomonsen J
Developmental and comparative immunology31(5)530-8(2007)
PEDE (Pig EST Data Explorer) has been expanded into Pig Expression Data Explorer, including 10 147 porcine full-length cDNA sequences.
Uenishi H, Eguchi-Ogawa T, Shinkai H, Okumura N, Suzuki K, Toki D, Hamasima N, Awata T
Nucleic acids research35(Database issue)D650-3(2007 Jan)
PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries.
Uenishi H, Eguchi T, Suzuki K, Sawazaki T, Toki D, Shinkai H, Okumura N, Hamasima N, Awata T
Nucleic acids research32(Database issue)D484-8(2004 Jan)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
Porcine CD72 gene is located on chromosome 1q21-28 in a region syntenic to human chromosome 9, and is highly transcribed in lymph node, thymus and lung tissues as well as in pulmonary alveolar macrophages.
Title: Various domains of the B-cell regulatory molecule CD72 has diverged at different rates in mammals: cloning, transcription and mapping of porcine CD72.
The following CD72 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the CD72 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
| CloneID | OSe30318 | |
| Clone ID Related Accession (Same CDS sequence) | NM_001097493.1 | |
| Accession Version | NM_001097493.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1098bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2015-10-17 | |
| Organism | Sus scrofa(pig) | |
| Product | B-cell differentiation antigen CD72 | |
| Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from DQ439546.1. ##Evidence-Data-START## Transcript exon combination :: DQ439546.1, AK237013.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA1487420, SAMEA1876835 [ECO:0000350] ##Evidence-Data-END## | |
1 | ATGGCTGAGG CCATCACCTA CGCAGACCTG CGGTTTGTGA AGGCTCCCCT GAAGAAGAGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | NP_001090962.1 |
| CDS | 1..1098 |
| Translation |
Target ORF information:
Target ORF information:
|
NM_001097493.1 |
1 | ATGGCTGAGG CCATCACCTA CGCAGACCTG CGGTTTGTGA AGGCTCCCCT GAAGAAGAGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OSe03086 | |
| Clone ID Related Accession (Same CDS sequence) | XM_005660185.2 , XM_005660185.3 | |
| Accession Version | XM_005660185.2 | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1098bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2015-09-10 | |
| Organism | Sus scrofa(Pig) | |
| Product | B-cell differentiation antigen CD72 isoform X1 | |
| Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003609421.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 11, 2015 this sequence version replaced XM_005660185.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGGCTGAGG CCATCACCTA CGCAGACCTG CGGTTTGTGA AGGCTCCCCT GAAGAAGAGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_005660242.1 |
| CDS | 138..1235 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_005660185.2 |
1 | ATGGCTGAGG CCATCACCTA CGCAGACCTG CGGTTTGTGA AGGCTCCCCT GAAGAAGAGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OSe03086 | |
| Clone ID Related Accession (Same CDS sequence) | XM_005660185.2 , XM_005660185.3 | |
| Accession Version | XM_005660185.3 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1098bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2017-05-12 | |
| Organism | Sus scrofa(pig) | |
| Product | B-cell differentiation antigen CD72 isoform X3 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010443.5) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On May 13, 2017 this sequence version replaced XM_005660185.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGGCTGAGG CCATCACCTA CGCAGACCTG CGGTTTGTGA AGGCTCCCCT GAAGAAGAGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_005660242.1 |
| CDS | 1649..2746 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_005660185.3 |
1 | ATGGCTGAGG CCATCACCTA CGCAGACCTG CGGTTTGTGA AGGCTCCCCT GAAGAAGAGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OSe229026 | |
| Clone ID Related Accession (Same CDS sequence) | XM_021096459.1 | |
| Accession Version | XM_021096459.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1167bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2017-05-12 | |
| Organism | Sus scrofa(pig) | |
| Product | B-cell differentiation antigen CD72 isoform X1 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010443.5) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGTTAACAG CTGCAGGGAC ACCCAAGGAA ACAACAGGCT TGGGTGGAGA GGCTGGCCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_020952118.1 |
| CDS | 81..1247 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_021096459.1 |
1 | ATGTTAACAG CTGCAGGGAC ACCCAAGGAA ACAACAGGCT TGGGTGGAGA GGCTGGCCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OSe229027 | |
| Clone ID Related Accession (Same CDS sequence) | XM_021097074.1 | |
| Accession Version | XM_021097074.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1167bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2017-05-12 | |
| Organism | Sus scrofa(pig) | |
| Product | B-cell differentiation antigen CD72 isoform X2 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010443.5) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGTTAACAG CTGCAGGGAC ACCCAAGGAA ACAACAGGCT TGGGTGGAGA GGCTGGCCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_020952733.1 |
| CDS | 82..1248 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_021097074.1 |
1 | ATGTTAACAG CTGCAGGGAC ACCCAAGGAA ACAACAGGCT TGGGTGGAGA GGCTGGCCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Various domains of the B-cell regulatory molecule CD72 has diverged at different rates in mammals: cloning, transcription and mapping of porcine CD72. |
PEDE (Pig EST Data Explorer) has been expanded into Pig Expression Data Explorer, including 10 147 porcine full-length cDNA sequences. |
PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries. |