LOC103370330 cDNA ORF clone, Stegastes partitus(bicolor damselfish)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC103370330
Entrez Gene ID	103370330
Full Name	collagen alpha-1(XXVIII) chain-like
Gene Type	protein-coding
Organism	Stegastes partitus(bicolor damselfish)

mRNA and Protein(s)

mRNA	Protein	Name
XM_008299355.1	XP_008297577.1	collagen alpha-1(XXVIII) chain-like

Pathways from BioSystems
Gene Ontology

The following LOC103370330 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC103370330 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OSt58039	XM_008299355.1 Latest version!	Stegastes partitus collagen alpha-1(XXVIII) chain-like (LOC103370330), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	19-21	$713.30 $1019.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC103370330 ( XM_008299355.1 ) cDNA ORF clone, Stegastes partitus(bicolor damselfish) -> XP_008297577.1 Stegastes partitus collagen alpha-1(XXVIII) chain-like (LOC103370330), mRNA.

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CloneID	OSt58039
Clone ID Related Accession (Same CDS sequence)	XM_008299355.1
Accession Version	XM_008299355.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3594bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2014-06-18
Organism	Stegastes partitus(bicolor damselfish)
Product	collagen alpha-1(XXVIII) chain-like
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_007579136.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Stegastes partitus Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGAAATGT TGCTGAAGGG AAACCTGAGC AGAGGACTGG CGCTCTGCTT TCTGCTGCTG 
GCTCTTGTGC ATGACACCAC AGGCCAAAGA AGAAAGACAG GACGCAGGAA TAACTACAGG 
CTGCATGATG ATGGAGGAAA TGGTCTGACA TGTTCACTGG AGGTGGCCTT CATCCTGGAC 
AGCTCTGAGA GTGCAAAAAT ATCCCTATTT GAGAGGCAGA AGGCCTTTGT GTTGAGCTTC 
AGCACCCGGC TTTCCATGCT GCAGGTAGCC GGCTGGACAC TGAAGGTGCG AATGGCTGCA 
CTTCAATACA GCAGCTCCGT GTCCATCGAG CACAGATTCT CAGCGTGGAA AGACCTGGAT 
TCATTCCACA GTCGAGTCAG CACAATGAAC TACATCGGGC ACGGCACCTA CACCACCTAT 
GCCATCACCA ACGCCTCGCA GCTGCTGGTG CAGGAGACGC CGGTGGACAG CGTCAGGGTT 
GCTGTACTGA TGACGGACGG AGTCGATCAT CCCCGTAACC CAGATGTGAT AGCGGCTGCT 
GCAGAGGCCA AAGGTCACAG CATAAAGTTC TTCGCCGTCG GGTTGTCGGA TATCGCCCAG 
CAGAGTCAGA ATAACGCCAA GCTCCGCGCC ATCGCCAGCA CGCCTGCTCA GCAGTTTGTC 
CAAAGTCTTC TTGACTCTCA GCTGGAGGAG AAGATGCTTA AAGAGATGGG TGCAGTCGCA 
TTTGAAGGGT GTCCACAAGC CCAAGTGTGC TTGTGTGAAA GAGGAGAGAG AGGCCCTCCA 
GGAAGTCCTG GTAGAAAAGG AGACCCAGGC TTCAGAGGGT CACCTGGCTC AAAAGGAGCA 
AGGGGGGAGC CTGGCTTGAA CGGTCGACCT GGAGGTGACG GTCCAGAGGG CCGTCCAGGT 
TATAAGGGCA ACAAGGGAGA GAGAGGAGAC TGTGGCACTC CTGGAGAAAA GGGCGACGCT 
GGACCTGAGG GACCTCCAGG ATCACGAGGA CCAAAAGGAG AACAGGGTGC GACAGGACCA 
CCAGGAGACA TGGGACCTGA GGGCCCAGCA GGATCTAAAG GAGACAGAGG GCCCAACGGT 
GCACCTGGAC CGCCAGGAGA CATCGGTATT GGATTCCCAG GAGCCAAGGG TGAAAAAGGG 
ATTCAGGGAA GACCAGGTCC CACAGGTCCT GTTGGAATAG GAGAACCAGG ACTGTTAGGA 
CCACCGGGAC CACCTGGAGC ACAAGGAAAC CCTGGACCTC CTGGAGAAGG GTTTGCAGGA 
CCGAAGGGTG ATCGGGGGTA CGACGGTCCG AGGGGCAACC GTGGGCTTCC TGGCATCGGG 
GTCAAAGGTG ACAAGGGCAA TCGTGGACCG CCAGGAATCC CAGGTCCAGT TGGAGCTCCT 
GGTTTAGGAC TTCAAGGAGA AAAGGGTGAT CAGGGCCCAG TTGGACCCGC AGGACCCAGA 
GGAATTCCAG GTGTAGGGAT TCAAGGACCC AAGGGGAATC AGGGCCTCCC AGGTGAGATT 
GGACTGCCAG GTGAGAGAGG TGTGGGAGAA CCAGGACCCA AAGGTGACCC CGGGGCCGAG 
GGGCTGCCAG GCATACCGGG TCAGCCAGGA GACGACGGAG CCCCGGGACC AAAGGGTGAC 
GTTGGGCTAC AGGGGCCCAG GGGACCTGAC GGGGCTCCTG GTAAAGGTGT CCCAGGAGAG 
AAGGGAGACA GAGGGGACAG GGGCTCTAGA GGGCAGCCAG GTGCAGTCGG TCCTGTGGGG 
CCGATGGGGC CGAAGGGGGA ACCAGGAAGT GTGGGGCCAC CAGGGTTAAC TGGACCCCCA 
GGCCGGGGTA TACCTGGTGC TAAGGGGGAA TCGGGTCTAC GAGGTCCAGC TGGAGCTGTG 
GGAGAGCCGG GAAATGGTTT GATTGGACCC AAGGGCGACA GAGGGCCACC GGGGCCTGCT 
GGGCCACCCG GGCTGAAAGG CGACGGTTTC CCCGGCGCTC CGGGACTCCC GGGGCCTCCT 
GGCCTGTTAG GAGAGGTCGG ACCAGAGGGC GTGGGATTAC CGGGACCAAA GGGAGACAGA 
GGCCTGCCTG GACCTACTGG ACCTGCCGGG CCACCAGGAA TCGGTCTCAT TGGTTCAAAG 
GGTTCAGTCG GCCAAATAGG ACCTCCTGGT CCACAGGGGT TACCCGGGGA AGGAATACAA 
GGACAGAAGG GGGAGCCTGG ATTTCAGGGG ATCCCCGGCC CCAGAGGTCC TCCAGGACAA 
GGTCTGCAGG GAGACAAGGG CGACCGAGGC TTCAGAGGGG AGAAAGGCAA GAAGGGAGAC 
CGAGGGGAGG CCGGAGAGCC GGGGACCGTC GGACCTCTGG GCAGGGTGGG ACAGAAGGGA 
GAGCCCGGAC TCACAAGGGA TGAAATCATC AAAATAGTGA GATCCATATG CAGCTGTGGG 
GTGACGTGCC GCCAAACGCC CCTGGAGCTC GTCTTCGTGA TCGACAGCTC AGAGAGCGTC 
GGCCCTGAAA ACTTCAACGT GATCAAAGAC TTTGTGAACG CGCTGATCGA CCGCGCCTCG 
GTCAGCAGGG ACACCACGCG GGTCGGCGTG GTCCTCTACA GCCACATCAA CATAGTGGTG 
GTCAGCCTCG GGCAGGAAGC CACCCGCGAT GAGATCAAGT CCTCTGTGCG CTCCATGGTC 
TACCTGGGCG AGGGCACGTT CACGGGCAGC GCCATCCAGC AGGCCAACCA CGTGTTCAAG 
GCGGCGCGGG CAGGCGTGAG GAAGGTGGCC ATCATCATCA CCGACGGTCA GGCTGACAAG 
AGGGACTCGG TGAGTCTGGA GAGCGCAGTG ACGGAGGCTC AGGGGAGCAA CATCGAGACG 
TTTGTGATCG GGGTGGTGAA CGAGAGCGAC CCCCTGTACG AAGAGTTCAA GAAGGAGCTC 
AGCTTCATGG CCTCTGACTC TGACAGCGAC CACGTCTACC TGATCGATGA CTTCAAATCC 
CTTCCAGCTC TGGAGAAAAA ACTGCTGAGT CATATTTGTG AAGACGGAAA CAGACGTTTG 
TTCAGTTCCG TCCCGAGCTC CAGACTCCCT CCAGGAATCC CAGAGGTCTC CGGCAACGTT 
CGGGAACCGT CGTACAGGAC GGACACGGAC ACGCCGACCT TCACCGGAGA CTTCAGGAGA 
GTTCAGATGG TGCCCGGTGC TCCAGCGTCT CACCCCGACA GGGAACCGGT CCCTCCGCTC 
AAACCCAAGA CGGACGACAG GACCGCCTCA GAAACTCAGA GGTTTCCGTT CTTCGACAGG 
GAGCCCTTCA GGCCGGTGAC AGAGTTCCTC CCACAGCTCG ACACCAACAA CCCCACACAT 
CGCACGGTGC TGACCGGAGC CATGGGACCG GCTGCTCCCA CTCTGAAGGC CCCACCTGAG 
AAGAAGACGC CGCCGCCGCC GCCGTCTCCA CCGCCTCCTC CCTCTGACGC CTACGCATCA 
GCAGAGCGCT GCAGACAGAT CCTGGATCCA GGACCGTGTC GGGAGTACGT GGTGAAGTGG 
TACTACGACG CCACAGCCAA CGGCTGCGCT CAGTTCTGGT TCGGAGGCTG TTTAGGAAAC 
GACAACCAGT TTGAGACTGA GAAGAGCTGC AGGGAAACCT GCGTCAAGGT CTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_008297577.1
CDS	145..3738
Translation	MEMLLKGNLSRGLALCFLLLALVHDTTGQRRKTGRRNNYRLHDDGGNGLTCSLEVAFILDSSESAKISLFERQKAFVLSFSTRLSMLQVAGWTLKVRMAALQYSSSVSIEHRFSAWKDLDSFHSRVSTMNYIGHGTYTTYAITNASQLLVQETPVDSVRVAVLMTDGVDHPRNPDVIAAAAEAKGHSIKFFAVGLSDIAQQSQNNAKLRAIASTPAQQFVQSLLDSQLEEKMLKEMGAVAFEGCPQAQVCLCERGERGPPGSPGRKGDPGFRGSPGSKGARGEPGLNGRPGGDGPEGRPGYKGNKGERGDCGTPGEKGDAGPEGPPGSRGPKGEQGATGPPGDMGPEGPAGSKGDRGPNGAPGPPGDIGIGFPGAKGEKGIQGRPGPTGPVGIGEPGLLGPPGPPGAQGNPGPPGEGFAGPKGDRGYDGPRGNRGLPGIGVKGDKGNRGPPGIPGPVGAPGLGLQGEKGDQGPVGPAGPRGIPGVGIQGPKGNQGLPGEIGLPGERGVGEPGPKGDPGAEGLPGIPGQPGDDGAPGPKGDVGLQGPRGPDGAPGKGVPGEKGDRGDRGSRGQPGAVGPVGPMGPKGEPGSVGPPGLTGPPGRGIPGAKGESGLRGPAGAVGEPGNGLIGPKGDRGPPGPAGPPGLKGDGFPGAPGLPGPPGLLGEVGPEGVGLPGPKGDRGLPGPTGPAGPPGIGLIGSKGSVGQIGPPGPQGLPGEGIQGQKGEPGFQGIPGPRGPPGQGLQGDKGDRGFRGEKGKKGDRGEAGEPGTVGPLGRVGQKGEPGLTRDEIIKIVRSICSCGVTCRQTPLELVFVIDSSESVGPENFNVIKDFVNALIDRASVSRDTTRVGVVLYSHINIVVVSLGQEATRDEIKSSVRSMVYLGEGTFTGSAIQQANHVFKAARAGVRKVAIIITDGQADKRDSVSLESAVTEAQGSNIETFVIGVVNESDPLYEEFKKELSFMASDSDSDHVYLIDDFKSLPALEKKLLSHICEDGNRRLFSSVPSSRLPPGIPEVSGNVREPSYRTDTDTPTFTGDFRRVQMVPGAPASHPDREPVPPLKPKTDDRTASETQRFPFFDREPFRPVTEFLPQLDTNNPTHRTVLTGAMGPAAPTLKAPPEKKTPPPPPSPPPPPSDAYASAERCRQILDPGPCREYVVKWYYDATANGCAQFWFGGCLGNDNQFETEKSCRETCVKV

Target ORF information:

RefSeq Version	XM_008299355.1
Organism	Stegastes partitus(bicolor damselfish)
Definition	Stegastes partitus collagen alpha-1(XXVIII) chain-like (LOC103370330), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_008299355.1

ORF Insert Sequence:

ATGGAAATGT TGCTGAAGGG AAACCTGAGC AGAGGACTGG CGCTCTGCTT TCTGCTGCTG 
GCTCTTGTGC ATGACACCAC AGGCCAAAGA AGAAAGACAG GACGCAGGAA TAACTACAGG 
CTGCATGATG ATGGAGGAAA TGGTCTGACA TGTTCACTGG AGGTGGCCTT CATCCTGGAC 
AGCTCTGAGA GTGCAAAAAT ATCCCTATTT GAGAGGCAGA AGGCCTTTGT GTTGAGCTTC 
AGCACCCGGC TTTCCATGCT GCAGGTAGCC GGCTGGACAC TGAAGGTGCG AATGGCTGCA 
CTTCAATACA GCAGCTCCGT GTCCATCGAG CACAGATTCT CAGCGTGGAA AGACCTGGAT 
TCATTCCACA GTCGAGTCAG CACAATGAAC TACATCGGGC ACGGCACCTA CACCACCTAT 
GCCATCACCA ACGCCTCGCA GCTGCTGGTG CAGGAGACGC CGGTGGACAG CGTCAGGGTT 
GCTGTACTGA TGACGGACGG AGTCGATCAT CCCCGTAACC CAGATGTGAT AGCGGCTGCT 
GCAGAGGCCA AAGGTCACAG CATAAAGTTC TTCGCCGTCG GGTTGTCGGA TATCGCCCAG 
CAGAGTCAGA ATAACGCCAA GCTCCGCGCC ATCGCCAGCA CGCCTGCTCA GCAGTTTGTC 
CAAAGTCTTC TTGACTCTCA GCTGGAGGAG AAGATGCTTA AAGAGATGGG TGCAGTCGCA 
TTTGAAGGGT GTCCACAAGC CCAAGTGTGC TTGTGTGAAA GAGGAGAGAG AGGCCCTCCA 
GGAAGTCCTG GTAGAAAAGG AGACCCAGGC TTCAGAGGGT CACCTGGCTC AAAAGGAGCA 
AGGGGGGAGC CTGGCTTGAA CGGTCGACCT GGAGGTGACG GTCCAGAGGG CCGTCCAGGT 
TATAAGGGCA ACAAGGGAGA GAGAGGAGAC TGTGGCACTC CTGGAGAAAA GGGCGACGCT 
GGACCTGAGG GACCTCCAGG ATCACGAGGA CCAAAAGGAG AACAGGGTGC GACAGGACCA 
CCAGGAGACA TGGGACCTGA GGGCCCAGCA GGATCTAAAG GAGACAGAGG GCCCAACGGT 
GCACCTGGAC CGCCAGGAGA CATCGGTATT GGATTCCCAG GAGCCAAGGG TGAAAAAGGG 
ATTCAGGGAA GACCAGGTCC CACAGGTCCT GTTGGAATAG GAGAACCAGG ACTGTTAGGA 
CCACCGGGAC CACCTGGAGC ACAAGGAAAC CCTGGACCTC CTGGAGAAGG GTTTGCAGGA 
CCGAAGGGTG ATCGGGGGTA CGACGGTCCG AGGGGCAACC GTGGGCTTCC TGGCATCGGG 
GTCAAAGGTG ACAAGGGCAA TCGTGGACCG CCAGGAATCC CAGGTCCAGT TGGAGCTCCT 
GGTTTAGGAC TTCAAGGAGA AAAGGGTGAT CAGGGCCCAG TTGGACCCGC AGGACCCAGA 
GGAATTCCAG GTGTAGGGAT TCAAGGACCC AAGGGGAATC AGGGCCTCCC AGGTGAGATT 
GGACTGCCAG GTGAGAGAGG TGTGGGAGAA CCAGGACCCA AAGGTGACCC CGGGGCCGAG 
GGGCTGCCAG GCATACCGGG TCAGCCAGGA GACGACGGAG CCCCGGGACC AAAGGGTGAC 
GTTGGGCTAC AGGGGCCCAG GGGACCTGAC GGGGCTCCTG GTAAAGGTGT CCCAGGAGAG 
AAGGGAGACA GAGGGGACAG GGGCTCTAGA GGGCAGCCAG GTGCAGTCGG TCCTGTGGGG 
CCGATGGGGC CGAAGGGGGA ACCAGGAAGT GTGGGGCCAC CAGGGTTAAC TGGACCCCCA 
GGCCGGGGTA TACCTGGTGC TAAGGGGGAA TCGGGTCTAC GAGGTCCAGC TGGAGCTGTG 
GGAGAGCCGG GAAATGGTTT GATTGGACCC AAGGGCGACA GAGGGCCACC GGGGCCTGCT 
GGGCCACCCG GGCTGAAAGG CGACGGTTTC CCCGGCGCTC CGGGACTCCC GGGGCCTCCT 
GGCCTGTTAG GAGAGGTCGG ACCAGAGGGC GTGGGATTAC CGGGACCAAA GGGAGACAGA 
GGCCTGCCTG GACCTACTGG ACCTGCCGGG CCACCAGGAA TCGGTCTCAT TGGTTCAAAG 
GGTTCAGTCG GCCAAATAGG ACCTCCTGGT CCACAGGGGT TACCCGGGGA AGGAATACAA 
GGACAGAAGG GGGAGCCTGG ATTTCAGGGG ATCCCCGGCC CCAGAGGTCC TCCAGGACAA 
GGTCTGCAGG GAGACAAGGG CGACCGAGGC TTCAGAGGGG AGAAAGGCAA GAAGGGAGAC 
CGAGGGGAGG CCGGAGAGCC GGGGACCGTC GGACCTCTGG GCAGGGTGGG ACAGAAGGGA 
GAGCCCGGAC TCACAAGGGA TGAAATCATC AAAATAGTGA GATCCATATG CAGCTGTGGG 
GTGACGTGCC GCCAAACGCC CCTGGAGCTC GTCTTCGTGA TCGACAGCTC AGAGAGCGTC 
GGCCCTGAAA ACTTCAACGT GATCAAAGAC TTTGTGAACG CGCTGATCGA CCGCGCCTCG 
GTCAGCAGGG ACACCACGCG GGTCGGCGTG GTCCTCTACA GCCACATCAA CATAGTGGTG 
GTCAGCCTCG GGCAGGAAGC CACCCGCGAT GAGATCAAGT CCTCTGTGCG CTCCATGGTC 
TACCTGGGCG AGGGCACGTT CACGGGCAGC GCCATCCAGC AGGCCAACCA CGTGTTCAAG 
GCGGCGCGGG CAGGCGTGAG GAAGGTGGCC ATCATCATCA CCGACGGTCA GGCTGACAAG 
AGGGACTCGG TGAGTCTGGA GAGCGCAGTG ACGGAGGCTC AGGGGAGCAA CATCGAGACG 
TTTGTGATCG GGGTGGTGAA CGAGAGCGAC CCCCTGTACG AAGAGTTCAA GAAGGAGCTC 
AGCTTCATGG CCTCTGACTC TGACAGCGAC CACGTCTACC TGATCGATGA CTTCAAATCC 
CTTCCAGCTC TGGAGAAAAA ACTGCTGAGT CATATTTGTG AAGACGGAAA CAGACGTTTG 
TTCAGTTCCG TCCCGAGCTC CAGACTCCCT CCAGGAATCC CAGAGGTCTC CGGCAACGTT 
CGGGAACCGT CGTACAGGAC GGACACGGAC ACGCCGACCT TCACCGGAGA CTTCAGGAGA 
GTTCAGATGG TGCCCGGTGC TCCAGCGTCT CACCCCGACA GGGAACCGGT CCCTCCGCTC 
AAACCCAAGA CGGACGACAG GACCGCCTCA GAAACTCAGA GGTTTCCGTT CTTCGACAGG 
GAGCCCTTCA GGCCGGTGAC AGAGTTCCTC CCACAGCTCG ACACCAACAA CCCCACACAT 
CGCACGGTGC TGACCGGAGC CATGGGACCG GCTGCTCCCA CTCTGAAGGC CCCACCTGAG 
AAGAAGACGC CGCCGCCGCC GCCGTCTCCA CCGCCTCCTC CCTCTGACGC CTACGCATCA 
GCAGAGCGCT GCAGACAGAT CCTGGATCCA GGACCGTGTC GGGAGTACGT GGTGAAGTGG 
TACTACGACG CCACAGCCAA CGGCTGCGCT CAGTTCTGGT TCGGAGGCTG TTTAGGAAAC 
GACAACCAGT TTGAGACTGA GAAGAGCTGC AGGGAAACCT GCGTCAAGGT CTAA