LOC361990 cDNA ORF clone, Rattus norvegicus(Norway rat)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC361990
Entrez Gene ID	361990
Full Name	chromatin target of PRMT1
Synonyms	Fop,SRAG
General protein information	Preferred Names chromatin target of PRMT1 Names chromatin target of PRMT1 protein Friend of PRMT1 protein small arginine- and glycine-rich protein
Gene Type	protein-coding
Organism	Rattus norvegicus(Norway rat)
Genome	Chromosome: 2 Map Location: 2q34

mRNA and Protein(s)

mRNA	Protein	Name
XM_006232710.3	XP_006232772.1	chromatin target of PRMT1 protein isoform X1
XM_006232711.3	XP_006232773.1	chromatin target of PRMT1 protein isoform X1
NM_001014175.1	NP_001014197.1	chromatin target of PRMT1 protein
XM_006232713.3	XP_006232775.1	chromatin target of PRMT1 protein isoform X2
XM_006232715.3	XP_006232777.1	chromatin target of PRMT1 protein isoform X3

Pathways from BioSystems

Homologies

Rattus norvegicus (Norway rat)	Chtop	NP_001014197.1
Danio rerio (zebrafish)	chtopa	NP_955840.1
Xenopus tropicalis (tropical clawed frog)	chtop	NP_001011274.1

Gene Ontology
Bibliography

Related articles in PubMed

Highly variable penetrance of abnormal phenotypes in embryonic lethal knockout mice.
Wilson R, Geyer SH, Reissig L, Rose J, Szumska D, Hardman E, Prin F, McGuire C, Ramirez-Solis R, White J, Galli A, Tudor C, Tuck E, Mazzeo CI, Smith JC, Robertson E, Adams DJ, Mohun T, Weninger WJ
Wellcome open research11(2016)

5-Hydroxymethylcytosine plays a critical role in glioblastomagenesis by recruiting the CHTOP-methylosome complex.
Takai H, Masuda K, Sato T, Sakaguchi Y, Suzuki T, Suzuki T, Koyama-Nasu R, Nasu-Nishimura Y, Katou Y, Ogawa H, Morishita Y, Kozuka-Hata H, Oyama M, Todo T, Ino Y, Mukasa A, Saito N, Toyoshima C, Shirahige K, Akiyama T
Cell reports9(1)48-60(2014 Oct)

Chtop is a component of the dynamic TREX mRNA export complex.
Chang CT, Hautbergue GM, Walsh MJ, Viphakone N, van Dijk TB, Philipsen S, Wilson SA
The EMBO journal32(3)473-86(2013 Feb)

Insights into RNA biology from an atlas of mammalian mRNA-binding proteins.
Castello A, Fischer B, Eichelbaum K, Horos R, Beckmann BM, Strein C, Davey NE, Humphreys DT, Preiss T, Steinmetz LM, Krijgsveld J, Hentze MW
Cell149(6)1393-406(2012 Jun)

The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts.
Baltz AG, Munschauer M, Schwanh?usser B, Vasile A, Murakawa Y, Schueler M, Youngs N, Penfold-Brown D, Drew K, Milek M, Wyler E, Bonneau R, Selbach M, Dieterich C, Landthaler M
Molecular cell46(5)674-90(2012 Jun)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following LOC361990 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC361990 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)
ORa05293	NM_001014175.1 Latest version!	Rattus norvegicus chromatin target of PRMT1 (Chtop), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	5-7	$139.30 $199.00
ORa24917	XM_006232713.3 Latest version!	Rattus norvegicus similar to DKFZP547E1010 protein (LOC361990), transcript variant X3, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	5-7	$139.30 $199.00
ORa24916	XM_006232710.3 Latest version!	Rattus norvegicus similar to DKFZP547E1010 protein (LOC361990), transcript variant X2, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$139.30 $199.00
ORa24916	XM_006232711.3 Latest version!	Rattus norvegicus similar to DKFZP547E1010 protein (LOC361990), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$139.30 $199.00
ORa24919	XM_006232715.3 Latest version!	Rattus norvegicus similar to DKFZP547E1010 protein (LOC361990), transcript variant X4, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$139.30 $199.00

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
1 Clone	30% OFF
2-4 Clone	40% OFF
5 or more Clone	50% OFF
All Other ORF Clones
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*Business Day

** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC361990 ( NM_001014175.1 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> NP_001014197.1 Rattus norvegicus chromatin target of PRMT1 (Chtop), mRNA.

Price & Availability↑

CloneID	ORa05293
Clone ID Related Accession (Same CDS sequence)	NM_001014175.1
Accession Version	NM_001014175.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 609bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-10-09
Organism	Rattus norvegicus(Norway rat)
Product	chromatin target of PRMT1 protein
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC081985.1. On Apr 20, 2005 this sequence version replaced XM_342290.2. ##Evidence-Data-START## Transcript exon combination :: BC081985.1, EV780592.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMD00052296, SAMD00052297 [ECO:0000350] ##Evidence-Data-END##

ATGGCTGCAC AGTCAGCGCC GAAAGTTGTG CTAAAAAGCA CCACCAAGAT GTCTCTAAAT 
GAGCGCTTTA CTAATATGCT GAAGAACAAA CAGCCGATGC CAGTGAATAT TTGGGCTTCG 
ATGCAGCAGC AGCAGCAGCT AGCCAGTGCC AGAAACAGAA GACTGGCCCA GCAGATGGAG 
AATAGACCCT CTGTCCAGGC AGCATTAAAA CTTAAGCAGA GCTTAAAGCA GCGCCTGGGT 
AAGAGTAATA TCCAGGCACG GTTAGGCCGA CCCATAGGTG CTCTGGCCAG GGGAGCAATT 
GGAGGAAGAA GCCTTCCCAT AATCCAGAGA GGCTTGCCCC GAGGAGGACT ACGTGGGGGA 
CGTGCCACCA GAACCCTGCT TAGGGGTGGG ATGTCGCTCC GAGGTCGGGG TATGATAGGT 
CGGGGAAGAG GGGGCTTTGG AGGCAGAGGC CGAGGTCGTG GCCGAGGGAG AGGTGCCCTC 
ACTCGCCCTG TATTGACCAA GGAGCAGCTG GACAACCAAT TGGATGCATA CATGTCGAAA 
ACTAAAGGAC ACCTGGATGC TGAATTGGAT GCCTACATGG CACAGACAGA TCCTGAAACC 
AATGATTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001014197.1
CDS	279..887
Translation	MAAQSAPKVVLKSTTKMSLNERFTNMLKNKQPMPVNIWASMQQQQQLASARNRRLAQQMENRPSVQAALKLKQSLKQRLGKSNIQARLGRPIGALARGAIGGRSLPIIQRGLPRGGLRGGRATRTLLRGGMSLRGRGMIGRGRGGFGGRGRGRGRGRGALTRPVLTKEQLDNQLDAYMSKTKGHLDAELDAYMAQTDPETND

Target ORF information:

RefSeq Version	NM_001014175.1
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus chromatin target of PRMT1 (Chtop), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001014175.1

ORF Insert Sequence:

ATGGCTGCAC AGTCAGCGCC GAAAGTTGTG CTAAAAAGCA CCACCAAGAT GTCTCTAAAT 
GAGCGCTTTA CTAATATGCT GAAGAACAAA CAGCCGATGC CAGTGAATAT TTGGGCTTCG 
ATGCAGCAGC AGCAGCAGCT AGCCAGTGCC AGAAACAGAA GACTGGCCCA GCAGATGGAG 
AATAGACCCT CTGTCCAGGC AGCATTAAAA CTTAAGCAGA GCTTAAAGCA GCGCCTGGGT 
AAGAGTAATA TCCAGGCACG GTTAGGCCGA CCCATAGGTG CTCTGGCCAG GGGAGCAATT 
GGAGGAAGAA GCCTTCCCAT AATCCAGAGA GGCTTGCCCC GAGGAGGACT ACGTGGGGGA 
CGTGCCACCA GAACCCTGCT TAGGGGTGGG ATGTCGCTCC GAGGTCGGGG TATGATAGGT 
CGGGGAAGAG GGGGCTTTGG AGGCAGAGGC CGAGGTCGTG GCCGAGGGAG AGGTGCCCTC 
ACTCGCCCTG TATTGACCAA GGAGCAGCTG GACAACCAAT TGGATGCATA CATGTCGAAA 
ACTAAAGGAC ACCTGGATGC TGAATTGGAT GCCTACATGG CACAGACAGA TCCTGAAACC 
AATGATTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

LOC361990 ( XM_006232713.3 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> XP_006232775.1 Rattus norvegicus similar to DKFZP547E1010 protein (LOC361990), transcript variant X3, mRNA.

Price & Availability↑

CloneID	ORa24917
Clone ID Related Accession (Same CDS sequence)	XM_006232713.3
Accession Version	XM_006232713.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 747bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-07-25
Organism	Rattus norvegicus(Norway rat)
Product	chromatin target of PRMT1 protein isoform X2
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005101.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006232713.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGCTGCAC AGTCAGCGCC GAAAGTTGTG CTAAAAAGCA CCACCAAGAT GTCTCTAAAT 
GAGCGCTTTA CTAATATGCT GAAGAACAAA CAGCCGATGC CAGTGAATAT TTGGGCTTCG 
ATGCAGCAGC AGCAGCAGCT AGCCAGTGCC AGAAACAGAA GACTGGCCCA GCAGATGGAG 
AATAGACCCT CTGTCCAGGC AGCATTAAAA CTTAAGCAGA GCTTAAAGCA GCGCCTGGGT 
AAGAGTAATA TCCAGGCACG GTTAGGCCGA CCCATAGGTG CTCTGGCCAG GGGAGCAATT 
GGAGGAAGAA GCCTTCCCAT AATCCAGAGA GGCTTGCCCC GAGGAGGACT ACGTGGGGGA 
CGTGCCACCA GAACCCTGCT TAGGGGTGGG ATGTCGCTCC GAGGTCAAAA CCTGCTCCGA 
GGTGGACGAG CCGTAGCTCC CCGAATGGGC TTAAGAAGAG GTGGTGTTCG AGGTCGTGGA 
GGTCCTGGGA GAGGGGGCCT AGGGCGTGGA GCTATGGGTC GTGGCGGAAT CGGTGGTAGA 
GGTCGGGGTA TGATAGGTCG GGGAAGAGGG GGCTTTGGAG GCAGAGGCCG AGGTCGTGGC 
CGAGGGAGAG GTGCCCTCAC TCGCCCTGTA TTGACCAAGG AGCAGCTGGA CAACCAATTG 
GATGCATACA TGTCGAAAAC TAAAGGACAC CTGGATGCTG AATTGGATGC CTACATGGCA 
CAGACAGATC CTGAAACCAA TGATTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_006232775.1
CDS	1014..1760
Translation	MAAQSAPKVVLKSTTKMSLNERFTNMLKNKQPMPVNIWASMQQQQQLASARNRRLAQQMENRPSVQAALKLKQSLKQRLGKSNIQARLGRPIGALARGAIGGRSLPIIQRGLPRGGLRGGRATRTLLRGGMSLRGQNLLRGGRAVAPRMGLRRGGVRGRGGPGRGGLGRGAMGRGGIGGRGRGMIGRGRGGFGGRGRGRGRGRGALTRPVLTKEQLDNQLDAYMSKTKGHLDAELDAYMAQTDPETND

Target ORF information:

RefSeq Version	XM_006232713.3
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus similar to DKFZP547E1010 protein (LOC361990), transcript variant X3, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_006232713.3

ORF Insert Sequence:

ATGGCTGCAC AGTCAGCGCC GAAAGTTGTG CTAAAAAGCA CCACCAAGAT GTCTCTAAAT 
GAGCGCTTTA CTAATATGCT GAAGAACAAA CAGCCGATGC CAGTGAATAT TTGGGCTTCG 
ATGCAGCAGC AGCAGCAGCT AGCCAGTGCC AGAAACAGAA GACTGGCCCA GCAGATGGAG 
AATAGACCCT CTGTCCAGGC AGCATTAAAA CTTAAGCAGA GCTTAAAGCA GCGCCTGGGT 
AAGAGTAATA TCCAGGCACG GTTAGGCCGA CCCATAGGTG CTCTGGCCAG GGGAGCAATT 
GGAGGAAGAA GCCTTCCCAT AATCCAGAGA GGCTTGCCCC GAGGAGGACT ACGTGGGGGA 
CGTGCCACCA GAACCCTGCT TAGGGGTGGG ATGTCGCTCC GAGGTCAAAA CCTGCTCCGA 
GGTGGACGAG CCGTAGCTCC CCGAATGGGC TTAAGAAGAG GTGGTGTTCG AGGTCGTGGA 
GGTCCTGGGA GAGGGGGCCT AGGGCGTGGA GCTATGGGTC GTGGCGGAAT CGGTGGTAGA 
GGTCGGGGTA TGATAGGTCG GGGAAGAGGG GGCTTTGGAG GCAGAGGCCG AGGTCGTGGC 
CGAGGGAGAG GTGCCCTCAC TCGCCCTGTA TTGACCAAGG AGCAGCTGGA CAACCAATTG 
GATGCATACA TGTCGAAAAC TAAAGGACAC CTGGATGCTG AATTGGATGC CTACATGGCA 
CAGACAGATC CTGAAACCAA TGATTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

LOC361990 ( XM_006232710.3 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> XP_006232772.1 Rattus norvegicus similar to DKFZP547E1010 protein (LOC361990), transcript variant X2, mRNA.

Price & Availability↑

CloneID	ORa24916
Clone ID Related Accession (Same CDS sequence)	XM_006232710.3 , XM_006232711.3
Accession Version	XM_006232710.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 750bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-07-25
Organism	Rattus norvegicus(Norway rat)
Product	chromatin target of PRMT1 protein isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005101.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006232710.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGCTGCAC AGTCAGCGCC GAAAGTTGTG CTAAAAAGCA CCACCAAGAT GTCTCTAAAT 
GAGCGCTTTA CTAATATGCT GAAGAACAAA CAGCCGATGC CAGTGAATAT TTGGGCTTCG 
ATGCAGCAGC AGCAGCAGCT AGCCAGTGCC AGAAACAGAA GACTGGCCCA GCAGATGGAG 
AATAGACCCT CTGTCCAGGC AGCATTAAAA CTTAAGCAGA AGAGCTTAAA GCAGCGCCTG 
GGTAAGAGTA ATATCCAGGC ACGGTTAGGC CGACCCATAG GTGCTCTGGC CAGGGGAGCA 
ATTGGAGGAA GAAGCCTTCC CATAATCCAG AGAGGCTTGC CCCGAGGAGG ACTACGTGGG 
GGACGTGCCA CCAGAACCCT GCTTAGGGGT GGGATGTCGC TCCGAGGTCA AAACCTGCTC 
CGAGGTGGAC GAGCCGTAGC TCCCCGAATG GGCTTAAGAA GAGGTGGTGT TCGAGGTCGT 
GGAGGTCCTG GGAGAGGGGG CCTAGGGCGT GGAGCTATGG GTCGTGGCGG AATCGGTGGT 
AGAGGTCGGG GTATGATAGG TCGGGGAAGA GGGGGCTTTG GAGGCAGAGG CCGAGGTCGT 
GGCCGAGGGA GAGGTGCCCT CACTCGCCCT GTATTGACCA AGGAGCAGCT GGACAACCAA 
TTGGATGCAT ACATGTCGAA AACTAAAGGA CACCTGGATG CTGAATTGGA TGCCTACATG 
GCACAGACAG ATCCTGAAAC CAATGATTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_006232772.1
CDS	1098..1847
Translation	MAAQSAPKVVLKSTTKMSLNERFTNMLKNKQPMPVNIWASMQQQQQLASARNRRLAQQMENRPSVQAALKLKQKSLKQRLGKSNIQARLGRPIGALARGAIGGRSLPIIQRGLPRGGLRGGRATRTLLRGGMSLRGQNLLRGGRAVAPRMGLRRGGVRGRGGPGRGGLGRGAMGRGGIGGRGRGMIGRGRGGFGGRGRGRGRGRGALTRPVLTKEQLDNQLDAYMSKTKGHLDAELDAYMAQTDPETND

Target ORF information:

RefSeq Version	XM_006232710.3
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus similar to DKFZP547E1010 protein (LOC361990), transcript variant X2, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_006232710.3

ORF Insert Sequence:

ATGGCTGCAC AGTCAGCGCC GAAAGTTGTG CTAAAAAGCA CCACCAAGAT GTCTCTAAAT 
GAGCGCTTTA CTAATATGCT GAAGAACAAA CAGCCGATGC CAGTGAATAT TTGGGCTTCG 
ATGCAGCAGC AGCAGCAGCT AGCCAGTGCC AGAAACAGAA GACTGGCCCA GCAGATGGAG 
AATAGACCCT CTGTCCAGGC AGCATTAAAA CTTAAGCAGA AGAGCTTAAA GCAGCGCCTG 
GGTAAGAGTA ATATCCAGGC ACGGTTAGGC CGACCCATAG GTGCTCTGGC CAGGGGAGCA 
ATTGGAGGAA GAAGCCTTCC CATAATCCAG AGAGGCTTGC CCCGAGGAGG ACTACGTGGG 
GGACGTGCCA CCAGAACCCT GCTTAGGGGT GGGATGTCGC TCCGAGGTCA AAACCTGCTC 
CGAGGTGGAC GAGCCGTAGC TCCCCGAATG GGCTTAAGAA GAGGTGGTGT TCGAGGTCGT 
GGAGGTCCTG GGAGAGGGGG CCTAGGGCGT GGAGCTATGG GTCGTGGCGG AATCGGTGGT 
AGAGGTCGGG GTATGATAGG TCGGGGAAGA GGGGGCTTTG GAGGCAGAGG CCGAGGTCGT 
GGCCGAGGGA GAGGTGCCCT CACTCGCCCT GTATTGACCA AGGAGCAGCT GGACAACCAA 
TTGGATGCAT ACATGTCGAA AACTAAAGGA CACCTGGATG CTGAATTGGA TGCCTACATG 
GCACAGACAG ATCCTGAAAC CAATGATTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

LOC361990 ( XM_006232711.3 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> XP_006232773.1 Rattus norvegicus similar to DKFZP547E1010 protein (LOC361990), transcript variant X1, mRNA.

Price & Availability↑

CloneID	ORa24916
Clone ID Related Accession (Same CDS sequence)	XM_006232710.3 , XM_006232711.3
Accession Version	XM_006232711.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 750bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-07-25
Organism	Rattus norvegicus(Norway rat)
Product	chromatin target of PRMT1 protein isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005101.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006232711.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGCTGCAC AGTCAGCGCC GAAAGTTGTG CTAAAAAGCA CCACCAAGAT GTCTCTAAAT 
GAGCGCTTTA CTAATATGCT GAAGAACAAA CAGCCGATGC CAGTGAATAT TTGGGCTTCG 
ATGCAGCAGC AGCAGCAGCT AGCCAGTGCC AGAAACAGAA GACTGGCCCA GCAGATGGAG 
AATAGACCCT CTGTCCAGGC AGCATTAAAA CTTAAGCAGA AGAGCTTAAA GCAGCGCCTG 
GGTAAGAGTA ATATCCAGGC ACGGTTAGGC CGACCCATAG GTGCTCTGGC CAGGGGAGCA 
ATTGGAGGAA GAAGCCTTCC CATAATCCAG AGAGGCTTGC CCCGAGGAGG ACTACGTGGG 
GGACGTGCCA CCAGAACCCT GCTTAGGGGT GGGATGTCGC TCCGAGGTCA AAACCTGCTC 
CGAGGTGGAC GAGCCGTAGC TCCCCGAATG GGCTTAAGAA GAGGTGGTGT TCGAGGTCGT 
GGAGGTCCTG GGAGAGGGGG CCTAGGGCGT GGAGCTATGG GTCGTGGCGG AATCGGTGGT 
AGAGGTCGGG GTATGATAGG TCGGGGAAGA GGGGGCTTTG GAGGCAGAGG CCGAGGTCGT 
GGCCGAGGGA GAGGTGCCCT CACTCGCCCT GTATTGACCA AGGAGCAGCT GGACAACCAA 
TTGGATGCAT ACATGTCGAA AACTAAAGGA CACCTGGATG CTGAATTGGA TGCCTACATG 
GCACAGACAG ATCCTGAAAC CAATGATTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_006232773.1
CDS	1014..1763
Translation	MAAQSAPKVVLKSTTKMSLNERFTNMLKNKQPMPVNIWASMQQQQQLASARNRRLAQQMENRPSVQAALKLKQKSLKQRLGKSNIQARLGRPIGALARGAIGGRSLPIIQRGLPRGGLRGGRATRTLLRGGMSLRGQNLLRGGRAVAPRMGLRRGGVRGRGGPGRGGLGRGAMGRGGIGGRGRGMIGRGRGGFGGRGRGRGRGRGALTRPVLTKEQLDNQLDAYMSKTKGHLDAELDAYMAQTDPETND

Target ORF information:

RefSeq Version	XM_006232711.3
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus similar to DKFZP547E1010 protein (LOC361990), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_006232711.3

ORF Insert Sequence:

ATGGCTGCAC AGTCAGCGCC GAAAGTTGTG CTAAAAAGCA CCACCAAGAT GTCTCTAAAT 
GAGCGCTTTA CTAATATGCT GAAGAACAAA CAGCCGATGC CAGTGAATAT TTGGGCTTCG 
ATGCAGCAGC AGCAGCAGCT AGCCAGTGCC AGAAACAGAA GACTGGCCCA GCAGATGGAG 
AATAGACCCT CTGTCCAGGC AGCATTAAAA CTTAAGCAGA AGAGCTTAAA GCAGCGCCTG 
GGTAAGAGTA ATATCCAGGC ACGGTTAGGC CGACCCATAG GTGCTCTGGC CAGGGGAGCA 
ATTGGAGGAA GAAGCCTTCC CATAATCCAG AGAGGCTTGC CCCGAGGAGG ACTACGTGGG 
GGACGTGCCA CCAGAACCCT GCTTAGGGGT GGGATGTCGC TCCGAGGTCA AAACCTGCTC 
CGAGGTGGAC GAGCCGTAGC TCCCCGAATG GGCTTAAGAA GAGGTGGTGT TCGAGGTCGT 
GGAGGTCCTG GGAGAGGGGG CCTAGGGCGT GGAGCTATGG GTCGTGGCGG AATCGGTGGT 
AGAGGTCGGG GTATGATAGG TCGGGGAAGA GGGGGCTTTG GAGGCAGAGG CCGAGGTCGT 
GGCCGAGGGA GAGGTGCCCT CACTCGCCCT GTATTGACCA AGGAGCAGCT GGACAACCAA 
TTGGATGCAT ACATGTCGAA AACTAAAGGA CACCTGGATG CTGAATTGGA TGCCTACATG 
GCACAGACAG ATCCTGAAAC CAATGATTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

LOC361990 ( XM_006232715.3 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> XP_006232777.1 Rattus norvegicus similar to DKFZP547E1010 protein (LOC361990), transcript variant X4, mRNA.

Price & Availability↑

CloneID	ORa24919
Clone ID Related Accession (Same CDS sequence)	XM_006232715.3
Accession Version	XM_006232715.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 612bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-07-25
Organism	Rattus norvegicus(Norway rat)
Product	chromatin target of PRMT1 protein isoform X3
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005101.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006232715.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGCTGCAC AGTCAGCGCC GAAAGTTGTG CTAAAAAGCA CCACCAAGAT GTCTCTAAAT 
GAGCGCTTTA CTAATATGCT GAAGAACAAA CAGCCGATGC CAGTGAATAT TTGGGCTTCG 
ATGCAGCAGC AGCAGCAGCT AGCCAGTGCC AGAAACAGAA GACTGGCCCA GCAGATGGAG 
AATAGACCCT CTGTCCAGGC AGCATTAAAA CTTAAGCAGA AGAGCTTAAA GCAGCGCCTG 
GGTAAGAGTA ATATCCAGGC ACGGTTAGGC CGACCCATAG GTGCTCTGGC CAGGGGAGCA 
ATTGGAGGAA GAAGCCTTCC CATAATCCAG AGAGGCTTGC CCCGAGGAGG ACTACGTGGG 
GGACGTGCCA CCAGAACCCT GCTTAGGGGT GGGATGTCGC TCCGAGGTCG GGGTATGATA 
GGTCGGGGAA GAGGGGGCTT TGGAGGCAGA GGCCGAGGTC GTGGCCGAGG GAGAGGTGCC 
CTCACTCGCC CTGTATTGAC CAAGGAGCAG CTGGACAACC AATTGGATGC ATACATGTCG 
AAAACTAAAG GACACCTGGA TGCTGAATTG GATGCCTACA TGGCACAGAC AGATCCTGAA 
ACCAATGATT GA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_006232777.1
CDS	1015..1626
Translation	MAAQSAPKVVLKSTTKMSLNERFTNMLKNKQPMPVNIWASMQQQQQLASARNRRLAQQMENRPSVQAALKLKQKSLKQRLGKSNIQARLGRPIGALARGAIGGRSLPIIQRGLPRGGLRGGRATRTLLRGGMSLRGRGMIGRGRGGFGGRGRGRGRGRGALTRPVLTKEQLDNQLDAYMSKTKGHLDAELDAYMAQTDPETND

Target ORF information:

RefSeq Version	XM_006232715.3
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus similar to DKFZP547E1010 protein (LOC361990), transcript variant X4, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_006232715.3

ORF Insert Sequence:

ATGGCTGCAC AGTCAGCGCC GAAAGTTGTG CTAAAAAGCA CCACCAAGAT GTCTCTAAAT 
GAGCGCTTTA CTAATATGCT GAAGAACAAA CAGCCGATGC CAGTGAATAT TTGGGCTTCG 
ATGCAGCAGC AGCAGCAGCT AGCCAGTGCC AGAAACAGAA GACTGGCCCA GCAGATGGAG 
AATAGACCCT CTGTCCAGGC AGCATTAAAA CTTAAGCAGA AGAGCTTAAA GCAGCGCCTG 
GGTAAGAGTA ATATCCAGGC ACGGTTAGGC CGACCCATAG GTGCTCTGGC CAGGGGAGCA 
ATTGGAGGAA GAAGCCTTCC CATAATCCAG AGAGGCTTGC CCCGAGGAGG ACTACGTGGG 
GGACGTGCCA CCAGAACCCT GCTTAGGGGT GGGATGTCGC TCCGAGGTCG GGGTATGATA 
GGTCGGGGAA GAGGGGGCTT TGGAGGCAGA GGCCGAGGTC GTGGCCGAGG GAGAGGTGCC 
CTCACTCGCC CTGTATTGAC CAAGGAGCAG CTGGACAACC AATTGGATGC ATACATGTCG 
AAAACTAAAG GACACCTGGA TGCTGAATTG GATGCCTACA TGGCACAGAC AGATCCTGAA 
ACCAATGATT GA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Highly variable penetrance of abnormal phenotypes in embryonic lethal knockout mice.
Wellcome open research11(2016)
Wilson R,Geyer SH,Reissig L,Rose J,Szumska D,Hardman E,Prin F,McGuire C,Ramirez-Solis R,White J,Galli A,Tudor C,Tuck E,Mazzeo CI,Smith JC,Robertson E,Adams DJ,Mohun T,Weninger WJ

5-Hydroxymethylcytosine plays a critical role in glioblastomagenesis by recruiting the CHTOP-methylosome complex.
Cell reports9(1)48-60(2014 Oct)
Takai H,Masuda K,Sato T,Sakaguchi Y,Suzuki T,Suzuki T,Koyama-Nasu R,Nasu-Nishimura Y,Katou Y,Ogawa H,Morishita Y,Kozuka-Hata H,Oyama M,Todo T,Ino Y,Mukasa A,Saito N,Toyoshima C,Shirahige K,Akiyama T

Chtop is a component of the dynamic TREX mRNA export complex.
The EMBO journal32(3)473-86(2013 Feb)
Chang CT,Hautbergue GM,Walsh MJ,Viphakone N,van Dijk TB,Philipsen S,Wilson SA

Insights into RNA biology from an atlas of mammalian mRNA-binding proteins.
Cell149(6)1393-406(2012 Jun)
Castello A,Fischer B,Eichelbaum K,Horos R,Beckmann BM,Strein C,Davey NE,Humphreys DT,Preiss T,Steinmetz LM,Krijgsveld J,Hentze MW

The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts.
Molecular cell46(5)674-90(2012 Jun)
Baltz AG,Munschauer M,Schwanh?usser B,Vasile A,Murakawa Y,Schueler M,Youngs N,Penfold-Brown D,Drew K,Milek M,Wyler E,Bonneau R,Selbach M,Dieterich C,Landthaler M

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LOC361990 cDNA ORF clone, Rattus norvegicus(Norway rat)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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