ORF » Species Summary » Danio rerio » CHTOPA cDNA ORF clone

CHTOPA cDNA ORF clone, Danio rerio(Zebrafish)

  • Gene

  • Clones

  • gRNAs

The following CHTOPA gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the CHTOPA cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
ODa32994 NM_199546.1
Latest version!		 Danio rerio chromatin target of PRMT1a (chtopa), mRNA. pcDNA3.1-C-(k)DYK or customized vector 7-9 $174.30
$249.00
ODa39660 XM_017352179.1
Latest version!		 Danio rerio chromatin target of PRMT1a (chtopa), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 7-9 $174.30
$249.00
ODa39659 XM_021467993.1
Latest version!		 Danio rerio chromatin target of PRMT1a (chtopa), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $174.30
$249.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    CHTOPA ( NM_199546.1 ) cDNA ORF clone, Danio rerio(Zebrafish) -> NP_955840.1 Danio rerio chromatin target of PRMT1a (chtopa), mRNA.
    Price & Availability↑
    CloneID ODa32994
    Clone ID Related Accession (Same CDS sequence) NM_199546.1
    Accession Version NM_199546.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 696bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2018-11-23
    Organism Danio rerio(zebrafish)
    Product chromatin target of PRMT1 protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC045295.1. ##Evidence-Data-START## Transcript exon combination :: BC045295.1, CA474003.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476763, SAMEA4476823 [ECO:0000348] ##Evidence-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    ATGAGCGCCC CTTCTTCTCA AAAAGTCGTG CTGAAAAGCA CCACCAAGGT GTCCCTGAAT 
    GAGCGCTTTA CAAACATGCT GAAGAACAAG CAGCCGACAG TGAGTAGCAT CCGGGCGACC 
    ATGCAGCAAC AGCACATGGC CAGTGCACAC AACCGCCTCC TTGCTCAGCA GATGGAGAAC 
    AGGCCCTCTG TGCAGGCTGC ACTTCATCAC AAACAGAGCC TGAAGCAGCG TCTTGGAAAG 
    AGCAACATCC AGGCCAGACT GGGTCGACCC ATTGGCTCCT TGATGCAGGG TGGTGGAAGA 
    GGACGAGGAT TACGAGGAAG AGCTAGAGGT GGTACCATGA GAGGAGCACT CTCGTTTAGA 
    GGTGCAGGTC AGATGAGAGG TAGAGGTGGT CCTGGACGCA TGGGTTTCCG CCGAGGGATG 
    CGTCATCGGG GAGGAGCTCC AGGACGAGGA GCTCTAGGAG GTCGAGGTGC AGCACGTGGA 
    ATGCCTGGAG GAAGAGGCCG TGGAGGTATG AGAGGCCGTG GAGGGTTTGC TGGAAGGGGT 
    CGTGGACGTG GCAGAGGCAG AGGAGCAGGT CGTCCCATCG TCACACGCGA GCAGTTGGAC 
    AACCAGCTTG ATGCGTACAT GTCTAAAACC AAAGGCCATC TGGATGCAGA GTTGGATGCG 
    TATATGGCCC AGGCAGATCC TGAGAGTATG GAGTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq NP_955840.1
    CDS308..1003
    Translation

    Target ORF information:

    RefSeq Version NM_199546.1
    Organism Danio rerio(zebrafish)
    Definition Danio rerio chromatin target of PRMT1a (chtopa), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 NM_199546.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    ATGAGCGCCC CTTCTTCTCA AAAAGTCGTG CTGAAAAGCA CCACCAAGGT GTCCCTGAAT 
    GAGCGCTTTA CAAACATGCT GAAGAACAAG CAGCCGACAG TGAGTAGCAT CCGGGCGACC 
    ATGCAGCAAC AGCACATGGC CAGTGCACAC AACCGCCTCC TTGCTCAGCA GATGGAGAAC 
    AGGCCCTCTG TGCAGGCTGC ACTTCATCAC AAACAGAGCC TGAAGCAGCG TCTTGGAAAG 
    AGCAACATCC AGGCCAGACT GGGTCGACCC ATTGGCTCCT TGATGCAGGG TGGTGGAAGA 
    GGACGAGGAT TACGAGGAAG AGCTAGAGGT GGTACCATGA GAGGAGCACT CTCGTTTAGA 
    GGTGCAGGTC AGATGAGAGG TAGAGGTGGT CCTGGACGCA TGGGTTTCCG CCGAGGGATG 
    CGTCATCGGG GAGGAGCTCC AGGACGAGGA GCTCTAGGAG GTCGAGGTGC AGCACGTGGA 
    ATGCCTGGAG GAAGAGGCCG TGGAGGTATG AGAGGCCGTG GAGGGTTTGC TGGAAGGGGT 
    CGTGGACGTG GCAGAGGCAG AGGAGCAGGT CGTCCCATCG TCACACGCGA GCAGTTGGAC 
    AACCAGCTTG ATGCGTACAT GTCTAAAACC AAAGGCCATC TGGATGCAGA GTTGGATGCG 
    TATATGGCCC AGGCAGATCC TGAGAGTATG GAGTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    CHTOPA ( XM_017352179.1 ) cDNA ORF clone, Danio rerio(Zebrafish) -> XP_017207668.1 Danio rerio chromatin target of PRMT1a (chtopa), transcript variant X1, mRNA.
    Price & Availability↑
    CloneID ODa39660
    Clone ID Related Accession (Same CDS sequence) XM_017352179.1
    Accession Version XM_017352179.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 654bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2016-06-23
    Organism Danio rerio(Zebrafish)
    Product chromatin target of PRMT1 protein isoform X1
    Comment MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007130.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    ATGGACGCTA AACTGCCCAC ACGCTTTACA AACATGCTGA AGAACAAGCA GCCGACAGTG 
    AGTAGCATCC GGGCGACCAT GCAGCAACAG CACATGGCCA GTGCACACAA CCGCCTCCTT 
    GCTCAGCAGA TGGAGAACAG GCCCTCTGTG CAGGCTGCAC TTCATCACAA ACAGAGCCTG 
    AAGCAGCGTC TTGGAAAGAG CAACATCCAG GCCAGACTGG GTCGACCCAT TGGCTCCTTG 
    ATGCAGGGTG GTGGAAGAGG ACGAGGATTA CGAGGAAGAG CTAGAGGTGG TACCATGAGA 
    GGAGCACTCT CGTTTAGAGG TGCAGGTCAG ATGAGAGGTA GAGGTGGTCC TGGACGCATG 
    GGTTTCCGCC GAGGGATGCG TCATCGGGGA GGAGCTCCAG GACGAGGAGC TCTAGGAGGT 
    CGAGGTGCAG CACGTGGAAT GCCTGGAGGA AGAGGCCGTG GAGGTATGAG AGGCCGTGGA 
    GGGTTTGCTG GAAGGGGTCG TGGACGTGGC AGAGGCAGAG GAGCAGGTCG TCCCATCGTC 
    ACACGCGAGC AGTTGGACAA CCAGCTTGAT GCGTACATGT CTAAAACCAA AGGCCATCTG 
    GATGCAGAGT TGGATGCGTA TATGGCCCAG GCAGATCCTG AGAGTATGGA GTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_017207668.1
    CDS116..769
    Translation

    Target ORF information:

    RefSeq Version XM_017352179.1
    Organism Danio rerio(Zebrafish)
    Definition Danio rerio chromatin target of PRMT1a (chtopa), transcript variant X1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_017352179.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    ATGGACGCTA AACTGCCCAC ACGCTTTACA AACATGCTGA AGAACAAGCA GCCGACAGTG 
    AGTAGCATCC GGGCGACCAT GCAGCAACAG CACATGGCCA GTGCACACAA CCGCCTCCTT 
    GCTCAGCAGA TGGAGAACAG GCCCTCTGTG CAGGCTGCAC TTCATCACAA ACAGAGCCTG 
    AAGCAGCGTC TTGGAAAGAG CAACATCCAG GCCAGACTGG GTCGACCCAT TGGCTCCTTG 
    ATGCAGGGTG GTGGAAGAGG ACGAGGATTA CGAGGAAGAG CTAGAGGTGG TACCATGAGA 
    GGAGCACTCT CGTTTAGAGG TGCAGGTCAG ATGAGAGGTA GAGGTGGTCC TGGACGCATG 
    GGTTTCCGCC GAGGGATGCG TCATCGGGGA GGAGCTCCAG GACGAGGAGC TCTAGGAGGT 
    CGAGGTGCAG CACGTGGAAT GCCTGGAGGA AGAGGCCGTG GAGGTATGAG AGGCCGTGGA 
    GGGTTTGCTG GAAGGGGTCG TGGACGTGGC AGAGGCAGAG GAGCAGGTCG TCCCATCGTC 
    ACACGCGAGC AGTTGGACAA CCAGCTTGAT GCGTACATGT CTAAAACCAA AGGCCATCTG 
    GATGCAGAGT TGGATGCGTA TATGGCCCAG GCAGATCCTG AGAGTATGGA GTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    CHTOPA ( XM_021467993.1 ) cDNA ORF clone, Danio rerio(Zebrafish) -> XP_021323668.1 Danio rerio chromatin target of PRMT1a (chtopa), transcript variant X1, mRNA.
    Price & Availability↑
    CloneID ODa39659
    Clone ID Related Accession (Same CDS sequence) XM_021467993.1
    Accession Version XM_021467993.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 933bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2017-06-14
    Organism Danio rerio(zebrafish)
    Product chromatin target of PRMT1 protein isoform X1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007130.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    ATGAAAGATG GTCTGTGTGC CATCCATATT GTTTGCCCTC TCTCATGCAA AAACACTCTC 
    TCTCTTCAGA GATATTTTCT GCTGCACCTC TGTTTCTCTC TATCTTTCTG TCTACAGAAA 
    AAGGTGCCTA GTCCGTACCT TGACGTGACC TGTTGCTCAA CCTTCTCACA AGGAGTGTCT 
    TACAGAACAG CTTATCGGGT CATGGTCTTG GTTGTAAGTG GCTGGGTTGC CGGACACCCC 
    TGTAGTCCTG GGCTAACTCA CCGTGTGGTG TCTCGGACAT CACAATTGGT TGATGGTGGC 
    CTCTTTACAA ACATGCTGAA GAACAAGCAG CCGACAGTGA GTAGCATCCG GGCGACCATG 
    CAGCAACAGC ACATGGCCAG TGCACACAAC CGCCTCCTTG CTCAGCAGAT GGAGAACAGG 
    CCCTCTGTGC AGGCTGCACT TCATCACAAA CAGAGCCTGA AGCAGCGTCT TGGAAAGAGC 
    AACATCCAGG CCAGACTGGG TCGACCCATT GGCTCCTTGA TGCAGGGTGG TGGAAGAGGA 
    CGAGGATTAC GAGGAAGAGC TAGAGGTGGT ACCATGAGAG GAGCACTCTC GTTTAGAGGT 
    GCAGGTCAGA TGAGAGGTAG AGGTGGTCCT GGACGCATGG GTTTCCGCCG AGGGATGCGT 
    CATCGGGGAG GAGCTCCAGG ACGAGGAGCT CTAGGAGGTC GAGGTGCAGC ACGTGGAATG 
    CCTGGAGGAA GAGGCCGTGG AGGTATGAGA GGCCGTGGAG GGTTTGCTGG AAGGGGTCGT 
    GGACGTGGCA GAGGCAGAGG AGCAGGTCGT CCCATCGTCA CACGCGAGCA GTTGGACAAC 
    CAGCTTGATG CGTACATGTC TAAAACCAAA GGCCATCTGG ATGCAGAGTT GGATGCGTAT 
    ATGGCCCAGG CAGATCCTGA GAGTATGGAG TAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_021323668.1
    CDS704..1636
    Translation

    Target ORF information:

    RefSeq Version XM_021467993.1
    Organism Danio rerio(zebrafish)
    Definition Danio rerio chromatin target of PRMT1a (chtopa), transcript variant X1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_021467993.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    ATGAAAGATG GTCTGTGTGC CATCCATATT GTTTGCCCTC TCTCATGCAA AAACACTCTC 
    TCTCTTCAGA GATATTTTCT GCTGCACCTC TGTTTCTCTC TATCTTTCTG TCTACAGAAA 
    AAGGTGCCTA GTCCGTACCT TGACGTGACC TGTTGCTCAA CCTTCTCACA AGGAGTGTCT 
    TACAGAACAG CTTATCGGGT CATGGTCTTG GTTGTAAGTG GCTGGGTTGC CGGACACCCC 
    TGTAGTCCTG GGCTAACTCA CCGTGTGGTG TCTCGGACAT CACAATTGGT TGATGGTGGC 
    CTCTTTACAA ACATGCTGAA GAACAAGCAG CCGACAGTGA GTAGCATCCG GGCGACCATG 
    CAGCAACAGC ACATGGCCAG TGCACACAAC CGCCTCCTTG CTCAGCAGAT GGAGAACAGG 
    CCCTCTGTGC AGGCTGCACT TCATCACAAA CAGAGCCTGA AGCAGCGTCT TGGAAAGAGC 
    AACATCCAGG CCAGACTGGG TCGACCCATT GGCTCCTTGA TGCAGGGTGG TGGAAGAGGA 
    CGAGGATTAC GAGGAAGAGC TAGAGGTGGT ACCATGAGAG GAGCACTCTC GTTTAGAGGT 
    GCAGGTCAGA TGAGAGGTAG AGGTGGTCCT GGACGCATGG GTTTCCGCCG AGGGATGCGT 
    CATCGGGGAG GAGCTCCAGG ACGAGGAGCT CTAGGAGGTC GAGGTGCAGC ACGTGGAATG 
    CCTGGAGGAA GAGGCCGTGG AGGTATGAGA GGCCGTGGAG GGTTTGCTGG AAGGGGTCGT 
    GGACGTGGCA GAGGCAGAGG AGCAGGTCGT CCCATCGTCA CACGCGAGCA GTTGGACAAC 
    CAGCTTGATG CGTACATGTC TAAAACCAAA GGCCATCTGG ATGCAGAGTT GGATGCGTAT 
    ATGGCCCAGG CAGATCCTGA GAGTATGGAG TAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    RFX transcription factors are essential for hearing in mice.
    Nature communications68549(2015 Oct)
    Elkon R,Milon B,Morrison L,Shah M,Vijayakumar S,Racherla M,Leitch CC,Silipino L,Hadi S,Weiss-Gayet M,Barras E,Schmid CD,Ait-Lounis A,Barnes A,Song Y,Eisenman DJ,Eliyahu E,Frolenkov GI,Strome SE,Durand B,Zaghloul NA,Jones SM,Reith W,Hertzano R


    Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences.
    Proceedings of the National Academy of Sciences of the United States of America99(26)16899-903(2002 Dec)
    Strausberg RL,Feingold EA,Grouse LH,Derge JG,Klausner RD,Collins FS,Wagner L,Shenmen CM,Schuler GD,Altschul SF,Zeeberg B,Buetow KH,Schaefer CF,Bhat NK,Hopkins RF,Jordan H,Moore T,Max SI,Wang J,Hsieh F,Diatchenko L,Marusina K,Farmer AA,Rubin GM,Hong L,Stapleton M,Soares MB,Bonaldo MF,Casavant TL,Scheetz TE,Brownstein MJ,Usdin TB,Toshiyuki S,Carninci P,Prange C,Raha SS,Loquellano NA,Peters GJ,Abramson RD,Mullahy SJ,Bosak SA,McEwan PJ,McKernan KJ,Malek JA,Gunaratne PH,Richards S,Worley KC,Hale S,Garcia AM,Gay LJ,Hulyk SW,Villalon DK,Muzny DM,Sodergren EJ,Lu X,Gibbs RA,Fahey J,Helton E,Ketteman M,Madan A,Rodrigues S,Sanchez A,Whiting M,Madan A,Young AC,Shevchenko Y,Bouffard GG,Blakesley RW,Touchman JW,Green ED,Dickson MC,Rodriguez AC,Grimwood J,Schmutz J,Myers RM,Butterfield YS,Krzywinski MI,Skalska U,Smailus DE,Schnerch A,Schein JE,Jones SJ,Marra MA,


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