Utp23 cDNA ORF clone, Rattus norvegicus(Norway rat)

Gene
Clones
gRNAs

Summary

Gene Symbol	Utp23
Entrez Gene ID	299900
Full Name	UTP23, small subunit processome component
Synonyms	RGD1307179
General protein information	Preferred Names UTP23, small subunit processome component Names rRNA-processing protein UTP23 homolog UTP23, small subunit (SSU) processome component, homolog
Gene Type	protein-coding
Organism	Rattus norvegicus(Norway rat)
Genome	Chromosome: 7 Map Location: 7q31

mRNA and Protein(s)

mRNA	Protein	Name
NM_001126266.1	NP_001119738.1	rRNA-processing protein UTP23 homolog

Pathways from BioSystems

Homologies

Homo sapiens (human)	UTP23	NP_115710.2
Danio rerio (zebrafish)	utp23	NP_001017816.1
Oryza sativa (rice)	Os02g0468200	NP_001046821.1
Drosophila melanogaster (fruit fly)	CG17652	NP_608617.1
Caenorhabditis elegans (roundworm)	C34E10.10	NP_498110.1
Schizosaccharomyces pombe (fission yeast)	utp23	NP_588391.1
Canis lupus familiaris (dog)	UTP23	XP_539141.2
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP008325	XP_317138.4
Eremothecium gossypii	AGOS_ACR011C	NP_983414.1
Magnaporthe oryzae (rice blast fungus)	MGG_14748	XP_003713736.1
Neurospora crassa	NCU02748	XP_965133.1
Pan troglodytes (chimpanzee)	UTP23	XP_519915.3
Mus musculus (house mouse)	Utp23	NP_084408.1
	UTP23	XP_001091225.2
Bos taurus (cattle)	LOC781182	XP_003586948.1
Rattus norvegicus (Norway rat)	Utp23	NP_001119738.1
Gallus gallus (chicken)	UTP23	XP_418400.1
Saccharomyces cerevisiae (baker's yeast)	UTP23	NP_014646.1
Kluyveromyces lactis	KLLA0D01023g	XP_453116.1
Arabidopsis thaliana (thale cress)	MEE21	NP_181004.2
Xenopus tropicalis (tropical clawed frog)	utp23	NP_001039134.1

Gene Ontology
Bibliography

Related articles in PubMed

Recurrent Coding Sequence Variation Explains Only A Small Fraction of the Genetic Architecture of Colorectal Cancer.
Timofeeva MN, Kinnersley B, Farrington SM, Whiffin N, Palles C, Svinti V, Lloyd A, Gorman M, Ooi LY, Hosking F, Barclay E, Zgaga L, Dobbins S, Martin L, Theodoratou E, Broderick P, Tenesa A, Smillie C, Grimes G, Hayward C, Campbell A, Porteous D, Deary IJ, Harris SE, Northwood EL, Barrett JH, Smith G, Wolf R, Forman D, Morreau H, Ruano D, Tops C, Wijnen J, Schrumpf M, Boot A, Vasen HF, Hes FJ, van Wezel T, Franke A, Lieb W, Schafmayer C, Hampe J, Buch S, Propping P, Hemminki K, F?rsti A, Westers H, Hofstra R, Pinheiro M, Pinto C, Teixeira M, Ruiz-Ponte C, Fern?ndez-Rozadilla C, Carracedo A, Castells A, Castellv?-Bel S, Campbell H, Bishop DT, Tomlinson IP, Dunlop MG, Houlston RS
Scientific reports516286(2015 Nov)

The roles of SSU processome components and surveillance factors in the initial processing of human ribosomal RNA.
Sloan KE, Bohnsack MT, Schneider C, Watkins NJ
RNA (New York, N.Y.)20(4)540-50(2014 Apr)

Two orthogonal cleavages separate subunit RNAs in mouse ribosome biogenesis.
Wang M, Anikin L, Pestov DG
Nucleic acids research42(17)11180-91(2014)

Insights into RNA biology from an atlas of mammalian mRNA-binding proteins.
Castello A, Fischer B, Eichelbaum K, Horos R, Beckmann BM, Strein C, Davey NE, Humphreys DT, Preiss T, Steinmetz LM, Krijgsveld J, Hentze MW
Cell149(6)1393-406(2012 Jun)

Regulation of p53 translation and induction after DNA damage by ribosomal protein L26 and nucleolin.
Takagi M, Absalon MJ, McLure KG, Kastan MB
Cell123(1)49-63(2005 Oct)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following Utp23 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Utp23 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ORa01420	NM_001126266.1 Latest version!	Rattus norvegicus UTP23, small subunit processome component (Utp23), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$139.30 $199.00

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
1 Clone	30% OFF
2-4 Clone	40% OFF
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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

Utp23 ( NM_001126266.1 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> NP_001119738.1 Rattus norvegicus UTP23, small subunit processome component (Utp23), mRNA.

Price & Availability↑

CloneID	ORa01420
Clone ID Related Accession (Same CDS sequence)	NM_001126266.1
Accession Version	NM_001126266.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 750bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2018-05-27
Organism	Rattus norvegicus(Norway rat)
Product	rRNA-processing protein UTP23 homolog
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CH473950.2. On or before May 7, 2008 this sequence version replaced XM_216918.4, XM_001063726.1. ##Evidence-Data-START## Transcript exon combination :: BC161887.1, CK604137.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMD00052296, SAMD00052297 [ECO:0000348] ##Evidence-Data-END##

ATGAAGATCA CCAGGCAGAA ACACGCCAAG AAGCATCTTG GCTTTTTCCG CAACAATTTC 
GGAGTCCGCG AGCCCTACCA GATCCTTCTA GATGGCACAT TCTGCCAGGC GGCGCTGCGG 
GGTCGCATCC AGCTGCGGGA CCAGCTGCCC CGCTACCTTA TGGGAGAGAC CCAGCTGTGC 
ACCACGAGAT GTGTGTTAAA GGAGTTAGAA ACACTGGGAA AGGAATTATA TGGAGCCAAA 
CTGATTGCAC AGAAATGCCA GGTTCGAAAC TGTCCTCATT TCAAGAGCGC AGTGAGTGGA 
TCTGAATGTC TCCTGTCTAT GGTGGATGAC GGGAATCCTC ACCATTATTT CGTGGCCACA 
CAGGATCAGA ACTTATCTGT GAAAGTCAAG AAAAATCCTG GAATTCCTCT CATGTTCATT 
ATTCAGAACA CCATAGTGTT GGACAAGCCT TCTCCCAGAA CCGTGGCCTT TGTGAAGGCG 
GTGGAGGCAG GCCAGCTGGT CTCTGTGCAC GAGAAACAAA GCATCAAGGA ACTCAAGGAG 
GAGCAAGGCT TGGTGCGGAA CCCTGAACTG AGGAAGAGGA GAAAAAAAAA GAAGGTGGGC 
GGCCCCAATC CTCTCAGCTG CCTGAAGAAA AAGAAGAAAG CACAGGATAC AAAGTCCCCT 
GCTTCGGAAA AGAAAAGGAA AAGGAAACGG ATTCGGATTC GAAACAAATC CACTCCTAAA 
GTGTCTGCGC AGCAGGGTGC GGAAGGATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001119738.1
CDS	79..828
Translation	MKITRQKHAKKHLGFFRNNFGVREPYQILLDGTFCQAALRGRIQLRDQLPRYLMGETQLCTTRCVLKELETLGKELYGAKLIAQKCQVRNCPHFKSAVSGSECLLSMVDDGNPHHYFVATQDQNLSVKVKKNPGIPLMFIIQNTIVLDKPSPRTVAFVKAVEAGQLVSVHEKQSIKELKEEQGLVRNPELRKRRKKKKVGGPNPLSCLKKKKKAQDTKSPASEKKRKRKRIRIRNKSTPKVSAQQGAEG

Target ORF information:

RefSeq Version	NM_001126266.1
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus UTP23, small subunit processome component (Utp23), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001126266.1

ORF Insert Sequence:

ATGAAGATCA CCAGGCAGAA ACACGCCAAG AAGCATCTTG GCTTTTTCCG CAACAATTTC 
GGAGTCCGCG AGCCCTACCA GATCCTTCTA GATGGCACAT TCTGCCAGGC GGCGCTGCGG 
GGTCGCATCC AGCTGCGGGA CCAGCTGCCC CGCTACCTTA TGGGAGAGAC CCAGCTGTGC 
ACCACGAGAT GTGTGTTAAA GGAGTTAGAA ACACTGGGAA AGGAATTATA TGGAGCCAAA 
CTGATTGCAC AGAAATGCCA GGTTCGAAAC TGTCCTCATT TCAAGAGCGC AGTGAGTGGA 
TCTGAATGTC TCCTGTCTAT GGTGGATGAC GGGAATCCTC ACCATTATTT CGTGGCCACA 
CAGGATCAGA ACTTATCTGT GAAAGTCAAG AAAAATCCTG GAATTCCTCT CATGTTCATT 
ATTCAGAACA CCATAGTGTT GGACAAGCCT TCTCCCAGAA CCGTGGCCTT TGTGAAGGCG 
GTGGAGGCAG GCCAGCTGGT CTCTGTGCAC GAGAAACAAA GCATCAAGGA ACTCAAGGAG 
GAGCAAGGCT TGGTGCGGAA CCCTGAACTG AGGAAGAGGA GAAAAAAAAA GAAGGTGGGC 
GGCCCCAATC CTCTCAGCTG CCTGAAGAAA AAGAAGAAAG CACAGGATAC AAAGTCCCCT 
GCTTCGGAAA AGAAAAGGAA AAGGAAACGG ATTCGGATTC GAAACAAATC CACTCCTAAA 
GTGTCTGCGC AGCAGGGTGC GGAAGGATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Recurrent Coding Sequence Variation Explains Only A Small Fraction of the Genetic Architecture of Colorectal Cancer.
Scientific reports516286(2015 Nov)
Timofeeva MN,Kinnersley B,Farrington SM,Whiffin N,Palles C,Svinti V,Lloyd A,Gorman M,Ooi LY,Hosking F,Barclay E,Zgaga L,Dobbins S,Martin L,Theodoratou E,Broderick P,Tenesa A,Smillie C,Grimes G,Hayward C,Campbell A,Porteous D,Deary IJ,Harris SE,Northwood EL,Barrett JH,Smith G,Wolf R,Forman D,Morreau H,Ruano D,Tops C,Wijnen J,Schrumpf M,Boot A,Vasen HF,Hes FJ,van Wezel T,Franke A,Lieb W,Schafmayer C,Hampe J,Buch S,Propping P,Hemminki K,F?rsti A,Westers H,Hofstra R,Pinheiro M,Pinto C,Teixeira M,Ruiz-Ponte C,Fern?ndez-Rozadilla C,Carracedo A,Castells A,Castellv?-Bel S,Campbell H,Bishop DT,Tomlinson IP,Dunlop MG,Houlston RS

The roles of SSU processome components and surveillance factors in the initial processing of human ribosomal RNA.
RNA (New York, N.Y.)20(4)540-50(2014 Apr)
Sloan KE,Bohnsack MT,Schneider C,Watkins NJ

Two orthogonal cleavages separate subunit RNAs in mouse ribosome biogenesis.
Nucleic acids research42(17)11180-91(2014)
Wang M,Anikin L,Pestov DG

Insights into RNA biology from an atlas of mammalian mRNA-binding proteins.
Cell149(6)1393-406(2012 Jun)
Castello A,Fischer B,Eichelbaum K,Horos R,Beckmann BM,Strein C,Davey NE,Humphreys DT,Preiss T,Steinmetz LM,Krijgsveld J,Hentze MW

Regulation of p53 translation and induction after DNA damage by ribosomal protein L26 and nucleolin.
Cell123(1)49-63(2005 Oct)
Takagi M,Absalon MJ,McLure KG,Kastan MB

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Utp23 cDNA ORF clone, Rattus norvegicus(Norway rat)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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