LOC100460187 cDNA ORF clone, Pongo abelii(Sumatran orangutan)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC100460187
Entrez Gene ID	100460187
Full Name	HLA class II histocompatibility antigen, DR alpha chain
Gene Type	protein-coding
Organism	Pongo abelii(Sumatran orangutan)

mRNA and Protein(s)

mRNA	Protein	Name
XM_002809142.3	XP_002809188.2	HLA class II histocompatibility antigen, DR alpha chain
XM_002809142.4	XP_002809188.3	HLA class II histocompatibility antigen, DR alpha chain

Pathways from BioSystems
Gene Ontology

The following LOC100460187 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC100460187 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OSa00434	XM_002809142.3 Latest version!	Pongo abelii HLA class II histocompatibility antigen, DR alpha chain (LOC100460187), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$174.30 $249.00
OSa184003	XM_002809142.4 Latest version!	Pongo abelii HLA class II histocompatibility antigen, DR alpha chain (LOC100460187), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$139.30 $199.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC100460187 ( XM_002809142.3 ) cDNA ORF clone, Pongo abelii(Sumatran orangutan) -> XP_002809188.2 Pongo abelii HLA class II histocompatibility antigen, DR alpha chain (LOC100460187), mRNA.

Price & Availability↑

CloneID	OSa00434
Clone ID Related Accession (Same CDS sequence)	XM_002809142.3
Accession Version	XM_002809142.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 765bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2014-09-22
Organism	Pongo abelii(Sumatran orangutan)
Product	HLA class II histocompatibility antigen, DR alpha chain
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_002874576.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 23, 2014 this sequence version replaced XM_002809142.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Pongo abelii Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGCCGTAA GTGGAGTCCC CATGCTAGGA GTTTTCATCA TAGCTGTGCT GATGAGCGCT 
CAGGAATCAC GGGCTATCAA AGAAGAACAT GTGATCATCC AGGCCGAGTT CTATCTGAAT 
CCTGACCAAT CAGGCGAATT TATGTTTGAC TTTGATGGTG ATGAGATTTT CCACGTGGAT 
ATGGCAAAGA AGGAGACAGT CTGGCGGCTT GAAGAATTTG GACGATTTGC CAGCTTTGAG 
GCTCAAGGTG CATTGGCCAA CATAGCTGTG GATAAAGCCA ACCTGGAAAT CATGACAAAG 
CGCTCCAACT ATACTCCGAT CACCAATGTA CCTCCAGAGG TAACTGTGCT CACAAACAGC 
CCTGTGGAGC TGAGAGAGCC CAACGTCCTC ATCTGTTTCA TCGACAAGTT CACCCCACCA 
GTGGTCAATG TCACGTGGCT TCTAAATGGA AAACCTGTCA CCACAGGAGT GTCAGAGACA 
GTCTTCCTGC CCAGGGAAGA CCATCTTTTC CGCAAGTTCC ACTATCTCCC CTTCCTGCCT 
TCAACTGAGG ACGTTTACGA CTGCAAAGTG GAGCACTGGG GCTTGGATGA GCCTCTTCTC 
AAGCACTGGG AGTTTGATGC TCCAAGCTCT CTCCCAGAGA CTAAAGAGAA CGTGGTGTGT 
GCCCTGGGCC TGATTGTGGG TCTGGTGGGC ATCATCATTG GGACCATCTT CATCATCAAG 
GGTGTGCGCA AGAGCAATGC AGCAGAACGC AGGGGGCCTC TGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_002809188.2
CDS	104..868
Translation	MAVSGVPMLGVFIIAVLMSAQESRAIKEEHVIIQAEFYLNPDQSGEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIAVDKANLEIMTKRSNYTPITNVPPEVTVLTNSPVELREPNVLICFIDKFTPPVVNVTWLLNGKPVTTGVSETVFLPREDHLFRKFHYLPFLPSTEDVYDCKVEHWGLDEPLLKHWEFDAPSSLPETKENVVCALGLIVGLVGIIIGTIFIIKGVRKSNAAERRGPL

Target ORF information:

RefSeq Version	XM_002809142.3
Organism	Pongo abelii(Sumatran orangutan)
Definition	Pongo abelii HLA class II histocompatibility antigen, DR alpha chain (LOC100460187), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_002809142.3

ORF Insert Sequence:

ATGGCCGTAA GTGGAGTCCC CATGCTAGGA GTTTTCATCA TAGCTGTGCT GATGAGCGCT 
CAGGAATCAC GGGCTATCAA AGAAGAACAT GTGATCATCC AGGCCGAGTT CTATCTGAAT 
CCTGACCAAT CAGGCGAATT TATGTTTGAC TTTGATGGTG ATGAGATTTT CCACGTGGAT 
ATGGCAAAGA AGGAGACAGT CTGGCGGCTT GAAGAATTTG GACGATTTGC CAGCTTTGAG 
GCTCAAGGTG CATTGGCCAA CATAGCTGTG GATAAAGCCA ACCTGGAAAT CATGACAAAG 
CGCTCCAACT ATACTCCGAT CACCAATGTA CCTCCAGAGG TAACTGTGCT CACAAACAGC 
CCTGTGGAGC TGAGAGAGCC CAACGTCCTC ATCTGTTTCA TCGACAAGTT CACCCCACCA 
GTGGTCAATG TCACGTGGCT TCTAAATGGA AAACCTGTCA CCACAGGAGT GTCAGAGACA 
GTCTTCCTGC CCAGGGAAGA CCATCTTTTC CGCAAGTTCC ACTATCTCCC CTTCCTGCCT 
TCAACTGAGG ACGTTTACGA CTGCAAAGTG GAGCACTGGG GCTTGGATGA GCCTCTTCTC 
AAGCACTGGG AGTTTGATGC TCCAAGCTCT CTCCCAGAGA CTAAAGAGAA CGTGGTGTGT 
GCCCTGGGCC TGATTGTGGG TCTGGTGGGC ATCATCATTG GGACCATCTT CATCATCAAG 
GGTGTGCGCA AGAGCAATGC AGCAGAACGC AGGGGGCCTC TGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

LOC100460187 ( XM_002809142.4 ) cDNA ORF clone, Pongo abelii(Sumatran orangutan) -> XP_002809188.3 Pongo abelii HLA class II histocompatibility antigen, DR alpha chain (LOC100460187), mRNA.

Price & Availability↑

CloneID	OSa184003
Clone ID Related Accession (Same CDS sequence)	XM_002809142.4
Accession Version	XM_002809142.4 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 765bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2018-02-27
Organism	Pongo abelii(Sumatran orangutan)
Product	HLA class II histocompatibility antigen, DR alpha chain
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_036909.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Feb 28, 2018 this sequence version replaced XM_002809142.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Pongo abelii Annotation Release 103 Annotation Version :: 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGCCGTAA GTGGAGTCCC CATGCTAGGA GTTTTCATCA TAGCTGTGCT GATGAGCGCT 
CAGGAATCAC GGGCTATCAA AGAAGAACAT GTGATCATCC AGGCCGAGTT CTATCTGAAT 
CCTGACCAAT CAGGCGAATT TATGTTTGAC TTTGATGGTG ATGAGATTTT CCACGTGGAT 
ATGGCAAAGA AGGAGACAGT CTGGCGGCTT GAAGAATTTG GACGATTTTC CAGCTTTGAG 
GCTCAAGGTG CATTGGCCAA CATAGCTGTG GATAAAGCCA ACCTGGAAAT CATGACAAAG 
CGCTCCAACT ATACTCCGAT CACCAATGTA CCTCCAGAGG TAACTGTGCT CACAAACAGC 
CCTGTGGAGC TGAGAGAGCC CAACGTCCTC ATCTGTTTCA TCGACAAGTT CACCCCACCA 
GTGGTCAATG TCACGTGGCT TCTAAATGGA AAACCTGTCA CCACAGGAGT GTCAGAGACA 
GTCTTCCTGC CCAGGGAAGA CCATCTTTTC CGCAAGTTCC ACTATCTCCC CTTCCTGCCT 
TCAACTGAGG ATGTTTACGA CTGCAAAGTG GAGCACTGGG GCTTGGATGA GCCTCTTCTC 
AAGCACTGGG AGTTTGATGC TCCAAGCTCT CTCCCAGAGA CTAAAGAGAA CGTGGTGTGT 
GCCCTGGGCC TGATTGTGGG TCTGGTGGGC ATCATCATTG GGACCATCTT CATCATCAAG 
GGTGTGCGCA AGAGCAATGC AGCAGAACGC AGGGGGCCTC TGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_002809188.3
CDS	104..868
Translation	MAVSGVPMLGVFIIAVLMSAQESRAIKEEHVIIQAEFYLNPDQSGEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFSSFEAQGALANIAVDKANLEIMTKRSNYTPITNVPPEVTVLTNSPVELREPNVLICFIDKFTPPVVNVTWLLNGKPVTTGVSETVFLPREDHLFRKFHYLPFLPSTEDVYDCKVEHWGLDEPLLKHWEFDAPSSLPETKENVVCALGLIVGLVGIIIGTIFIIKGVRKSNAAERRGPL

Target ORF information:

RefSeq Version	XM_002809142.4
Organism	Pongo abelii(Sumatran orangutan)
Definition	Pongo abelii HLA class II histocompatibility antigen, DR alpha chain (LOC100460187), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_002809142.4

ORF Insert Sequence:

ATGGCCGTAA GTGGAGTCCC CATGCTAGGA GTTTTCATCA TAGCTGTGCT GATGAGCGCT 
CAGGAATCAC GGGCTATCAA AGAAGAACAT GTGATCATCC AGGCCGAGTT CTATCTGAAT 
CCTGACCAAT CAGGCGAATT TATGTTTGAC TTTGATGGTG ATGAGATTTT CCACGTGGAT 
ATGGCAAAGA AGGAGACAGT CTGGCGGCTT GAAGAATTTG GACGATTTTC CAGCTTTGAG 
GCTCAAGGTG CATTGGCCAA CATAGCTGTG GATAAAGCCA ACCTGGAAAT CATGACAAAG 
CGCTCCAACT ATACTCCGAT CACCAATGTA CCTCCAGAGG TAACTGTGCT CACAAACAGC 
CCTGTGGAGC TGAGAGAGCC CAACGTCCTC ATCTGTTTCA TCGACAAGTT CACCCCACCA 
GTGGTCAATG TCACGTGGCT TCTAAATGGA AAACCTGTCA CCACAGGAGT GTCAGAGACA 
GTCTTCCTGC CCAGGGAAGA CCATCTTTTC CGCAAGTTCC ACTATCTCCC CTTCCTGCCT 
TCAACTGAGG ATGTTTACGA CTGCAAAGTG GAGCACTGGG GCTTGGATGA GCCTCTTCTC 
AAGCACTGGG AGTTTGATGC TCCAAGCTCT CTCCCAGAGA CTAAAGAGAA CGTGGTGTGT 
GCCCTGGGCC TGATTGTGGG TCTGGTGGGC ATCATCATTG GGACCATCTT CATCATCAAG 
GGTGTGCGCA AGAGCAATGC AGCAGAACGC AGGGGGCCTC TGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.