Gene Symbol | APOBEC3H |
Entrez Gene ID | 723811 |
Full Name | apolipoprotein B mRNA editing enzyme catalytic subunit 3H |
Gene Type | protein-coding |
Organism | Macaca mulatta(Rhesus monkey) |
ORF » Species Summary » Macaca mulatta » APOBEC3H cDNA ORF clone
Gene Symbol | APOBEC3H |
Entrez Gene ID | 723811 |
Full Name | apolipoprotein B mRNA editing enzyme catalytic subunit 3H |
Gene Type | protein-coding |
Organism | Macaca mulatta(Rhesus monkey) |
mRNA | Protein | Name |
---|---|---|
XM_015150340.1 | XP_015005826.1 | DNA dC->dU-editing enzyme APOBEC-3H isoform X1 |
XM_015150342.1 | XP_015005828.1 | DNA dC->dU-editing enzyme APOBEC-3H isoform X2 |
XM_015150343.1 | XP_015005829.1 | DNA dC->dU-editing enzyme APOBEC-3H isoform X3 |
NM_001042372.1 | NP_001035831.1 | DNA dC->dU-editing enzyme APOBEC-3H isoform 2 |
NM_001345935.1 | NP_001332864.1 | DNA dC->dU-editing enzyme APOBEC-3H |
XM_015150341.1 | XP_015005827.1 | DNA dC->dU-editing enzyme APOBEC-3H isoform X1 |
XM_028827468.1 | XP_028683301.1 | DNA dC->dU-editing enzyme APOBEC-3H isoform X1 |
XM_028827469.1 | XP_028683302.1 | DNA dC->dU-editing enzyme APOBEC-3H isoform X1 |
XM_015150343.2 | XP_015005829.2 | DNA dC->dU-editing enzyme APOBEC-3H isoform X1 |
A new rhesus macaque assembly and annotation for next-generation sequencing analyses.
Zimin AV, Cornish AS, Maudhoo MD, Gibbs RM, Zhang X, Pandey S, Meehan DT, Wipfler K, Bosinger SE, Johnson ZP, Tharp GK, Mar?ais G, Roberts M, Ferguson B, Fox HS, Treangen T, Salzberg SL, Yorke JA, Norgren RB Jr
Biology direct9(1)20(2014 Oct)
Analysis of the N-terminal positively charged residues of the simian immunodeficiency virus Vif reveals a critical amino acid required for the antagonism of rhesus APOBEC3D, G, and H.
Schmitt K, Katuwal M, Wang Y, Li C, Stephens EB
Virology449140-9(2014 Jan)
Adaptive evolution and antiviral activity of the conserved mammalian cytidine deaminase APOBEC3H.
OhAinle M, Kerns JA, Malik HS, Emerman M
Journal of virology80(8)3853-62(2006 Apr)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The arginine at position 14 of the SIV Vif is a critical residue for virus restriction by rhA3D, rhA3G and rhA3H.
Title: Analysis of the N-terminal positively charged residues of the simian immunodeficiency virus Vif reveals a critical amino acid required for the antagonism of rhesus APOBEC3D, G, and H.
The following APOBEC3H gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the APOBEC3H cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OMb04746 | |
Clone ID Related Accession (Same CDS sequence) | NM_001042372.1 | |
Accession Version | NM_001042372.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 633bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-04-14 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | DNA dC->dU-editing enzyme APOBEC-3H isoform 2 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from DQ507277.1. Transcript Variant: This variant (2) uses an alternate splice acceptor site in the 3' coding region, compared to variant 1, and encodes a shorter isoform (2), compared to isoform 1. ##Evidence-Data-START## Transcript exon combination :: DQ507277.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00706768, SAMN00706769 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGCTCTGC TAACAGCCAA AACATTCAGC TTACAGTTTA ACAACAAGCG CCGTGTCAAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001035831.1 |
CDS | 1..633 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001042372.1 |
1 | ATGGCTCTGC TAACAGCCAA AACATTCAGC TTACAGTTTA ACAACAAGCG CCGTGTCAAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMb57584 | |
Clone ID Related Accession (Same CDS sequence) | NM_001345935.1 | |
Accession Version | NM_001345935.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 633bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-07-05 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | DNA dC->dU-editing enzyme APOBEC-3H | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JU481501.1 and JV053406.1. On or before Jan 10, 2018 this sequence version replaced NM_001042372.1, XM_015150345.1. ##Evidence-Data-START## Transcript exon combination :: JU481501.1, JU481502.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN10394797 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGCTCTGC TAACAGCCAA AACATTCAGC TTACAGTTTA ACAACAAGCG CCGTGTCAAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001332864.1 |
CDS | 64..696 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001345935.1 |
1 | ATGGCTCTGC TAACAGCCAA AACATTCAGC TTACAGTTTA ACAACAAGCG CCGTGTCAAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMb41729 | |
Clone ID Related Accession (Same CDS sequence) | XM_015150340.1 , XM_015150341.1 | |
Accession Version | XM_015150340.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 678bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2015-12-20 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | DNA dC->dU-editing enzyme APOBEC-3H isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_014805257.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Macaca mulatta Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTCTGC TAACAGCCAA AACATTCAGC TTACAGTTTA ACAACAAGCG CCGTGTCAAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_015005826.1 |
CDS | 173..850 |
Translation |
Target ORF information:
Target ORF information:
|
XM_015150340.1 |
1 | ATGGCTCTGC TAACAGCCAA AACATTCAGC TTACAGTTTA ACAACAAGCG CCGTGTCAAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMb41729 | |
Clone ID Related Accession (Same CDS sequence) | XM_015150340.1 , XM_015150341.1 | |
Accession Version | XM_015150341.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 678bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2015-12-20 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | DNA dC->dU-editing enzyme APOBEC-3H isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_014805257.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Macaca mulatta Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTCTGC TAACAGCCAA AACATTCAGC TTACAGTTTA ACAACAAGCG CCGTGTCAAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_015005827.1 |
CDS | 87..764 |
Translation |
Target ORF information:
Target ORF information:
|
XM_015150341.1 |
1 | ATGGCTCTGC TAACAGCCAA AACATTCAGC TTACAGTTTA ACAACAAGCG CCGTGTCAAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMb41730 | |
Clone ID Related Accession (Same CDS sequence) | XM_015150342.1 | |
Accession Version | XM_015150342.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 675bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2015-12-20 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | DNA dC->dU-editing enzyme APOBEC-3H isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_014805257.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Macaca mulatta Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTCTGC TAACAGCCAA AACATTCAGC TTACAGTTTA ACAACAAGCG CCGTGTCAAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_015005828.1 |
CDS | 179..853 |
Translation |
Target ORF information:
Target ORF information:
|
XM_015150342.1 |
1 | ATGGCTCTGC TAACAGCCAA AACATTCAGC TTACAGTTTA ACAACAAGCG CCGTGTCAAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMb41731 | |
Clone ID Related Accession (Same CDS sequence) | XM_015150343.1 | |
Accession Version | XM_015150343.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 636bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2015-12-20 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | DNA dC->dU-editing enzyme APOBEC-3H isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_014805257.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Macaca mulatta Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTCTGC TAACAGCCAA AACATTCAGC TTACAGTTTA ACAACAAGCG CCGTGTCAAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_015005829.1 |
CDS | 154..789 |
Translation |
Target ORF information:
Target ORF information:
|
XM_015150343.1 |
1 | ATGGCTCTGC TAACAGCCAA AACATTCAGC TTACAGTTTA ACAACAAGCG CCGTGTCAAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMb62047 | |
Clone ID Related Accession (Same CDS sequence) | XM_028827468.1 , XM_028827469.1 , XM_015150343.2 | |
Accession Version | XM_028827468.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 636bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-25 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | DNA dC->dU-editing enzyme APOBEC-3H isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_041763.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Macaca mulatta Annotation Release 103 Annotation Version :: 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTCTGC TAACAGCCAA AACATTCAGC TTACAGTTTA ACAACAAGCG CCGTGTCAAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_028683301.1 |
CDS | 105..740 |
Translation |
Target ORF information:
Target ORF information:
|
XM_028827468.1 |
1 | ATGGCTCTGC TAACAGCCAA AACATTCAGC TTACAGTTTA ACAACAAGCG CCGTGTCAAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMb62047 | |
Clone ID Related Accession (Same CDS sequence) | XM_028827468.1 , XM_028827469.1 , XM_015150343.2 | |
Accession Version | XM_028827469.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 636bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-25 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | DNA dC->dU-editing enzyme APOBEC-3H isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_041763.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Macaca mulatta Annotation Release 103 Annotation Version :: 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTCTGC TAACAGCCAA AACATTCAGC TTACAGTTTA ACAACAAGCG CCGTGTCAAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_028683302.1 |
CDS | 192..827 |
Translation |
Target ORF information:
Target ORF information:
|
XM_028827469.1 |
1 | ATGGCTCTGC TAACAGCCAA AACATTCAGC TTACAGTTTA ACAACAAGCG CCGTGTCAAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMb62047 | |
Clone ID Related Accession (Same CDS sequence) | XM_028827468.1 , XM_028827469.1 , XM_015150343.2 | |
Accession Version | XM_015150343.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 636bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-25 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | DNA dC->dU-editing enzyme APOBEC-3H isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_041763.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Apr 23, 2019 this sequence version replaced XM_015150343.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Macaca mulatta Annotation Release 103 Annotation Version :: 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTCTGC TAACAGCCAA AACATTCAGC TTACAGTTTA ACAACAAGCG CCGTGTCAAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_015005829.2 |
CDS | 120..755 |
Translation |
Target ORF information:
Target ORF information:
|
XM_015150343.2 |
1 | ATGGCTCTGC TAACAGCCAA AACATTCAGC TTACAGTTTA ACAACAAGCG CCGTGTCAAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
A new rhesus macaque assembly and annotation for next-generation sequencing analyses. |
Analysis of the N-terminal positively charged residues of the simian immunodeficiency virus Vif reveals a critical amino acid required for the antagonism of rhesus APOBEC3D, G, and H. |
Adaptive evolution and antiviral activity of the conserved mammalian cytidine deaminase APOBEC3H. |