Gene Symbol | HDDC2 |
Entrez Gene ID | 716491 |
Full Name | HD domain containing 2 |
Gene Type | protein-coding |
Organism | Macaca mulatta(Rhesus monkey) |
ORF » Species Summary » Macaca mulatta » HDDC2 cDNA ORF clone
Gene Symbol | HDDC2 |
Entrez Gene ID | 716491 |
Full Name | HD domain containing 2 |
Gene Type | protein-coding |
Organism | Macaca mulatta(Rhesus monkey) |
mRNA | Protein | Name |
---|---|---|
XM_002803907.2 | XP_002803953.1 | HD domain-containing protein 2 isoform X1 |
NM_001194872.2 | NP_001181801.1 | HD domain-containing protein 2 |
XM_028846840.1 | XP_028702673.1 | HD domain-containing protein 2 isoform X2 |
NM_001194872.3 | NP_001181801.1 | HD domain-containing protein 2 |
Homo sapiens (human) | HDDC2 | NP_057147.2 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP010140 | XP_319297.4 |
Caenorhabditis elegans (roundworm) | F45F2.9 | NP_001256098.1 |
Saccharomyces cerevisiae (baker's yeast) | YBR242W | NP_009801.1 |
Eremothecium gossypii | AGOS_AFL036C | NP_985512.2 |
Schizosaccharomyces pombe (fission yeast) | SPCC4G3.17 | NP_587821.1 |
Neurospora crassa | NCU04470 | XP_957039.1 |
Oryza sativa (rice) | Os02g0179100 | NP_001046081.1 |
HDDC2 | XP_002803953.1 | |
Gallus gallus (chicken) | HDDC2 | NP_001264847.1 |
Drosophila melanogaster (fruit fly) | CG11050 | NP_609052.1 |
Arabidopsis thaliana (thale cress) | AT2G23820 | NP_973522.1 |
Xenopus tropicalis (tropical clawed frog) | hddc2 | XP_002936040.1 |
Canis lupus familiaris (dog) | HDDC2 | XP_005615768.1 |
Mus musculus (house mouse) | Hddc2 | NP_081444.1 |
Danio rerio (zebrafish) | hddc2 | NP_001038696.1 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP012582 | XP_306780.4 |
Kluyveromyces lactis | KLLA0F06798g | XP_455388.1 |
Rattus norvegicus (Norway rat) | Hddc2 | NP_001101930.1 |
Pan troglodytes (chimpanzee) | HDDC2 | XP_001152848.2 |
Bos taurus (cattle) | HDDC2 | NP_001068869.1 |
Magnaporthe oryzae (rice blast fungus) | MGG_08021 | XP_003714974.1 |
A new rhesus macaque assembly and annotation for next-generation sequencing analyses.
Zimin AV, Cornish AS, Maudhoo MD, Gibbs RM, Zhang X, Pandey S, Meehan DT, Wipfler K, Bosinger SE, Johnson ZP, Tharp GK, Mar?ais G, Roberts M, Ferguson B, Fox HS, Treangen T, Salzberg SL, Yorke JA, Norgren RB Jr
Biology direct9(1)20(2014 Oct)
Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques.
Yan G, Zhang G, Fang X, Zhang Y, Li C, Ling F, Cooper DN, Li Q, Li Y, van Gool AJ, Du H, Chen J, Chen R, Zhang P, Huang Z, Thompson JR, Meng Y, Bai Y, Wang J, Zhuo M, Wang T, Huang Y, Wei L, Li J, Wang Z, Hu H, Yang P, Le L, Stenson PD, Li B, Liu X, Ball EV, An N, Huang Q, Zhang Y, Fan W, Zhang X, Li Y, Wang W, Katze MG, Su B, Nielsen R, Yang H, Wang J, Wang X, Wang J
Nature biotechnology29(11)1019-23(2011 Oct)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following HDDC2 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the HDDC2 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OMb01803 | |
Clone ID Related Accession (Same CDS sequence) | NM_001194872.2 , NM_001194872.3 | |
Accession Version | NM_001194872.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 513bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-27 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | HD domain-containing protein 2 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JSUE03032280.1 and JSUE03032281.1. On Apr 1, 2016 this sequence version replaced NM_001194872.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## RNAseq introns :: mixed/partial sample support SAMEA4688315, SAMEA4688316 [ECO:0000350] ##Evidence-Data-END## |
1 | ATGGCTTCGG TCTCCTCTGC GACCTTCTTG GGCCACGGGG CTCGGTCCCT ACTGCAGTTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001181801.1 |
CDS | 23..535 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001194872.2 |
1 | ATGGCTTCGG TCTCCTCTGC GACCTTCTTG GGCCACGGGG CTCGGTCCCT ACTGCAGTTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMb18130 | |
Clone ID Related Accession (Same CDS sequence) | XM_002803907.2 | |
Accession Version | XM_002803907.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 615bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-25 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | HD domain-containing protein 2 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_041757.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Dec 21, 2015 this sequence version replaced XM_002803907.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Macaca mulatta Annotation Release 103 Annotation Version :: 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTTCGG TCTCCTCTGC GACCTTCTTG GGCCACGGGG CTCGGTCCCT ACTGCAGTTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_002803953.1 |
CDS | 202..816 |
Translation |
Target ORF information:
Target ORF information:
|
XM_002803907.2 |
1 | ATGGCTTCGG TCTCCTCTGC GACCTTCTTG GGCCACGGGG CTCGGTCCCT ACTGCAGTTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMb01803 | |
Clone ID Related Accession (Same CDS sequence) | NM_001194872.2 , NM_001194872.3 | |
Accession Version | NM_001194872.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 513bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-11 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | HD domain-containing protein 2 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from QNVO02000336.1. On Dec 12, 2019 this sequence version replaced NM_001194872.2. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## RNAseq introns :: mixed/partial sample support SAMEA4688315, SAMEA4688316 [ECO:0000350] ##Evidence-Data-END## |
1 | ATGGCTTCGG TCTCCTCTGC GACCTTCTTG GGCCACGGGG CTCGGTCCCT ACTGCAGTTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001181801.1 |
CDS | 23..535 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001194872.3 |
1 | ATGGCTTCGG TCTCCTCTGC GACCTTCTTG GGCCACGGGG CTCGGTCCCT ACTGCAGTTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMb83754 | |
Clone ID Related Accession (Same CDS sequence) | XM_028846840.1 | |
Accession Version | XM_028846840.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 543bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-25 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | HD domain-containing protein 2 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_041757.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Macaca mulatta Annotation Release 103 Annotation Version :: 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGATGAAGC AGAGAGTCCC ACGGACTGGC TGGGTATACA GAAATGTCCA AAGGCCGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_028702673.1 |
CDS | 15..557 |
Translation |
Target ORF information:
Target ORF information:
|
XM_028846840.1 |
1 | ATGATGAAGC AGAGAGTCCC ACGGACTGGC TGGGTATACA GAAATGTCCA AAGGCCGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
A new rhesus macaque assembly and annotation for next-generation sequencing analyses. |
Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. |