Gene Symbol | ACER3 |
Entrez Gene ID | 697832 |
Full Name | alkaline ceramidase 3 |
Synonyms | PHCA |
Gene Type | protein-coding |
Organism | Macaca mulatta(Rhesus monkey) |
ORF » Species Summary » Macaca mulatta » ACER3 cDNA ORF clone
Gene Symbol | ACER3 |
Entrez Gene ID | 697832 |
Full Name | alkaline ceramidase 3 |
Synonyms | PHCA |
Gene Type | protein-coding |
Organism | Macaca mulatta(Rhesus monkey) |
mRNA | Protein | Name |
---|---|---|
XM_015115116.2 | XP_014970602.1 | alkaline ceramidase 3 isoform X2 |
XM_015115117.2 | XP_014970603.1 | alkaline ceramidase 3 isoform X3 |
XM_015115116.1 | XP_014970602.1 | alkaline ceramidase 3 isoform X1 |
XM_028832543.1 | XP_028688376.1 | alkaline ceramidase 3 isoform X1 |
XM_015115117.1 | XP_014970603.1 | alkaline ceramidase 3 isoform X2 |
NM_001266751.1 | NP_001253680.1 | alkaline ceramidase 3 |
Rattus norvegicus (Norway rat) | Acer3 | XP_574497.2 |
Gallus gallus (chicken) | ACER3 | XP_417279.1 |
Saccharomyces cerevisiae (baker's yeast) | YPC1 | NP_009742.1 |
Kluyveromyces lactis | KLLA0E23981g | XP_455032.1 |
Homo sapiens (human) | ACER3 | NP_060837.3 |
Pan troglodytes (chimpanzee) | ACER3 | XP_001175032.1 |
Bos taurus (cattle) | ACER3 | NP_001095755.1 |
Oryza sativa (rice) | Os03g0698900 | NP_001050983.1 |
ACER3 | XP_001088478.1 | |
Mus musculus (house mouse) | Acer3 | NP_079684.2 |
Saccharomyces cerevisiae (baker's yeast) | YDC1 | NP_015238.1 |
Magnaporthe oryzae (rice blast fungus) | MGG_16424 | XP_003710504.1 |
Neurospora crassa | NCU02969 | XP_965356.2 |
Canis lupus familiaris (dog) | ACER3 | XP_849760.1 |
Arabidopsis thaliana (thale cress) | ATCES1 | NP_567660.1 |
Danio rerio (zebrafish) | LOC555411 | XP_005169254.1 |
Xenopus tropicalis (tropical clawed frog) | acer3 | NP_001106437.1 |
A new rhesus macaque assembly and annotation for next-generation sequencing analyses.
Zimin AV, Cornish AS, Maudhoo MD, Gibbs RM, Zhang X, Pandey S, Meehan DT, Wipfler K, Bosinger SE, Johnson ZP, Tharp GK, Mar?ais G, Roberts M, Ferguson B, Fox HS, Treangen T, Salzberg SL, Yorke JA, Norgren RB Jr
Biology direct9(1)20(2014 Oct)
Sequential use of transcriptional profiling, expression quantitative trait mapping, and gene association implicates MMP20 in human kidney aging.
Wheeler HE, Metter EJ, Tanaka T, Absher D, Higgins J, Zahn JM, Wilhelmy J, Davis RW, Singleton A, Myers RM, Ferrucci L, Kim SK
PLoS genetics5(10)e1000685(2009 Oct)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
Observational study of gene-disease association. (HuGE Navigator)
Title: Sequential use of transcriptional profiling, expression quantitative trait mapping, and gene association implicates MMP20 in human kidney aging.
The following ACER3 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the ACER3 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OMb03180 | |
Clone ID Related Accession (Same CDS sequence) | NM_001266751.1 | |
Accession Version | NM_001266751.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 804bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-28 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | alkaline ceramidase 3 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JU322439.1. On May 26, 2012 this sequence version replaced XM_001088478.2. ##Evidence-Data-START## Transcript exon combination :: JU322439.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4688315, SAMEA4688316 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGCTCCGG CCGCGGACCG GGAGGGCTAC TGGGGCCCCA CAACCTCCAC CCTGGACTGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001253680.1 |
CDS | 74..877 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001266751.1 |
1 | ATGGCTCCGG CCGCGGACCG GGAGGGCTAC TGGGGCCCCA CAACCTCCAC CCTGGACTGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMb47443 | |
Clone ID Related Accession (Same CDS sequence) | XM_015115116.2 , XM_015115116.1 | |
Accession Version | XM_015115116.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 582bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-25 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | alkaline ceramidase 3 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_041767.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Apr 23, 2019 this sequence version replaced XM_015115116.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Macaca mulatta Annotation Release 103 Annotation Version :: 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGATCCT GGTGCTTCCA CATGACTCTG AAATATGAAA TGCAGCTACT GGATGAACTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_014970602.1 |
CDS | 145..726 |
Translation |
Target ORF information:
Target ORF information:
|
XM_015115116.2 |
1 | ATGGGATCCT GGTGCTTCCA CATGACTCTG AAATATGAAA TGCAGCTACT GGATGAACTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMb47443 | |
Clone ID Related Accession (Same CDS sequence) | XM_015115116.2 , XM_015115116.1 | |
Accession Version | XM_015115116.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 582bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2015-12-20 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | alkaline ceramidase 3 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_014805465.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Macaca mulatta Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGATCCT GGTGCTTCCA CATGACTCTG AAATATGAAA TGCAGCTACT GGATGAACTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_014970602.1 |
CDS | 202..783 |
Translation |
Target ORF information:
Target ORF information:
|
XM_015115116.1 |
1 | ATGGGATCCT GGTGCTTCCA CATGACTCTG AAATATGAAA TGCAGCTACT GGATGAACTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMb47444 | |
Clone ID Related Accession (Same CDS sequence) | XM_015115117.2 , XM_015115117.1 | |
Accession Version | XM_015115117.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 519bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-25 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | alkaline ceramidase 3 isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_041767.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Apr 23, 2019 this sequence version replaced XM_015115117.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Macaca mulatta Annotation Release 103 Annotation Version :: 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGATATACA GCTGTTGCAT ATTTGTGTAC TGCATGTTTG AATGTTTCAA GATCAAGAAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_014970603.1 |
CDS | 276..794 |
Translation |
Target ORF information:
Target ORF information:
|
XM_015115117.2 |
1 | ATGATATACA GCTGTTGCAT ATTTGTGTAC TGCATGTTTG AATGTTTCAA GATCAAGAAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMb47444 | |
Clone ID Related Accession (Same CDS sequence) | XM_015115117.2 , XM_015115117.1 | |
Accession Version | XM_015115117.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 519bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2015-12-20 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | alkaline ceramidase 3 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_014805465.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Macaca mulatta Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGATATACA GCTGTTGCAT ATTTGTGTAC TGCATGTTTG AATGTTTCAA GATCAAGAAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_014970603.1 |
CDS | 317..835 |
Translation |
Target ORF information:
Target ORF information:
|
XM_015115117.1 |
1 | ATGATATACA GCTGTTGCAT ATTTGTGTAC TGCATGTTTG AATGTTTCAA GATCAAGAAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMb68284 | |
Clone ID Related Accession (Same CDS sequence) | XM_028832543.1 | |
Accession Version | XM_028832543.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 738bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-25 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | alkaline ceramidase 3 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_041767.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Macaca mulatta Annotation Release 103 Annotation Version :: 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAGAGACT TCAGCAAGAT GGGTGCTACA GTCTTAGGGA ATACAGTGAG TAACCTGATC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_028688376.1 |
CDS | 206..943 |
Translation |
Target ORF information:
Target ORF information:
|
XM_028832543.1 |
1 | ATGAGAGACT TCAGCAAGAT GGGTGCTACA GTCTTAGGGA ATACAGTGAG TAACCTGATC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
A new rhesus macaque assembly and annotation for next-generation sequencing analyses. |
Sequential use of transcriptional profiling, expression quantitative trait mapping, and gene association implicates MMP20 in human kidney aging. |