Gene Symbol | LOC4335642 |
Entrez Gene ID | 4335642 |
Full Name | vacuolar protein-sorting-associated protein 11 homolog |
Gene Type | protein-coding |
Organism | Oryza sativa Japonica Group(Japanese rice) |
ORF » Species Summary » Oryza sativa Japonica Group » LOC4335642 cDNA ORF clone
Gene Symbol | LOC4335642 |
Entrez Gene ID | 4335642 |
Full Name | vacuolar protein-sorting-associated protein 11 homolog |
Gene Type | protein-coding |
Organism | Oryza sativa Japonica Group(Japanese rice) |
mRNA | Protein | Name |
---|---|---|
XM_015781416.1 | XP_015636902.1 | vacuolar protein-sorting-associated protein 11 homolog |
XM_015781416.2 | XP_015636902.1 | vacuolar protein-sorting-associated protein 11 homolog isoform X1 |
XM_026024881.1 | XP_025880666.1 | vacuolar protein-sorting-associated protein 11 homolog isoform X2 |
VPS11 | XP_001101032.1 | |
Canis lupus familiaris (dog) | VPS11 | XP_546492.2 |
Mus musculus (house mouse) | Vps11 | NP_082165.1 |
Homo sapiens (human) | VPS11 | NP_068375.3 |
Xenopus tropicalis (tropical clawed frog) | vps11 | NP_001120879.1 |
Magnaporthe oryzae (rice blast fungus) | MGG_03283 | XP_003716678.1 |
Arabidopsis thaliana (thale cress) | VPS11 | NP_027676.1 |
Pan troglodytes (chimpanzee) | VPS11 | XP_508805.2 |
Neurospora crassa | NCU05422 | XP_963245.2 |
Oryza sativa (rice) | Os04g0382700 | NP_001052609.1 |
Bos taurus (cattle) | VPS11 | NP_001069684.1 |
Rattus norvegicus (Norway rat) | Vps11 | NP_001101608.1 |
Gallus gallus (chicken) | VPS11 | XP_417847.2 |
Danio rerio (zebrafish) | vps11 | NP_001032797.1 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP002665 | XP_312259.5 |
The following LOC4335642 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC4335642 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OOa09569 | |
Clone ID Related Accession (Same CDS sequence) | XM_015781416.1 , XM_015781416.2 | |
Accession Version | XM_015781416.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2844bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-02-29 | |
Organism | Oryza sativa Japonica Group(Japanese rice) | |
Product | vacuolar protein-sorting-associated protein 11 homolog | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_015379177.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Oryza sativa Japonica Group Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTACCAGT GGCGCAAGTT CGAGTTCTTC GAGGAGAAGG CGGCCGGGCG GGGCGTGCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_015636902.1 |
CDS | 188..3031 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGTACCAGT GGCGCAAGTT CGAGTTCTTC GAGGAGAAGG CGGCCGGGCG GGGCGTGCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OOa09569 | |
Clone ID Related Accession (Same CDS sequence) | XM_015781416.1 , XM_015781416.2 | |
Accession Version | XM_015781416.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2844bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-08-06 | |
Organism | Oryza sativa Japonica Group(Japanese rice) | |
Product | vacuolar protein-sorting-associated protein 11 homolog isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_029259.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 7, 2018 this sequence version replaced XM_015781416.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Oryza sativa Japonica Group Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTACCAGT GGCGCAAGTT CGAGTTCTTC GAGGAGAAGG CGGCCGGGCG GGGCGTGCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_015636902.1 |
CDS | 188..3031 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGTACCAGT GGCGCAAGTT CGAGTTCTTC GAGGAGAAGG CGGCCGGGCG GGGCGTGCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OOa46919 | |
Clone ID Related Accession (Same CDS sequence) | XM_026024881.1 | |
Accession Version | XM_026024881.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2730bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-08-06 | |
Organism | Oryza sativa Japonica Group(Japanese rice) | |
Product | vacuolar protein-sorting-associated protein 11 homolog isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_029259.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Oryza sativa Japonica Group Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAAACAGG TAAGAAAAGA TAAATGTATG GCTCCAAAAA TCAAAATCTT TACCTGGAGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_025880666.1 |
CDS | 278..3007 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGAAACAGG TAAGAAAAGA TAAATGTATG GCTCCAAAAA TCAAAATCTT TACCTGGAGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.