ORF » Species Summary » Oryza sativa Japonica Group » LOC4335219 cDNA ORF clone

LOC4335219 cDNA ORF clone, Oryza sativa Japonica Group(Japanese rice)

The following LOC4335219 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC4335219 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OOa09361 XM_015780967.2
Latest version!		 Oryza sativa Japonica Group aspartyl protease family protein 1 (LOC4335219), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 7-9 $342.30
$489.00
OOa32630 XM_015780969.2
Latest version!		 Oryza sativa Japonica Group aspartyl protease family protein 1 (LOC4335219), transcript variant X2, mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $342.30
$489.00
View Old Accession Versions >>
OOa09361 XM_015780967.1 Oryza sativa Japonica Group aspartic proteinase-like protein 1 (LOC4335219), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 7-9 $342.30
$489.00
OOa32630 XM_015780969.1 Oryza sativa Japonica Group aspartic proteinase-like protein 1 (LOC4335219), transcript variant X2, mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $342.30
$489.00
Hide Old Accession Versions >>

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC4335219 ( XM_015780967.1 ) cDNA ORF clone, Oryza sativa Japonica Group(Japanese rice) -> XP_015636453.1 Oryza sativa Japonica Group aspartic proteinase-like protein 1 (LOC4335219), transcript variant X1, mRNA.
    Price & Availability↑
    CloneID OOa09361
    Clone ID Related Accession (Same CDS sequence) XM_015780967.1 , XM_015780967.2
    Accession Version XM_015780967.1 Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1593bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2016-02-29
    Organism Oryza sativa Japonica Group(Japanese rice)
    Product aspartic proteinase-like protein 1 isoform X1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_015379177.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Oryza sativa Japonica Group Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    ATGTCATCCT TCCAGCTTCT CCTCCACTCC TTGCTCTTGC TTCTCGTCGT TGGCGGCGTC 
    GCGGGCGGCG GCGGCGGAGG TGGTCGCCTG AGGGCGCCTT CGCTGGAATT CCACCACCGG 
    TTCTCTTCTC CGGTGCAGCG GTGGGCGGAG GCGCGCGGGC ACGTGCTCCC CGGAGGCTGG 
    CCGGAGCACG GCAGCGCCGA TTACGTTGCG GCCCTGAACG GGCACGACCG CCGCCGCGCG 
    CTCTCAGCAG CCGGCGGCGA CGGTGGAGGA GGAGGAGACA AGCCCCCGCC GCTCACGTTT 
    TCTGAGGGAA ACGCCACCCT CAAGGTCAGC AACCTCGGAT TCTTGCACTA TGCGCTTGTG 
    ACGGTCGGCA CGCCGGGCCA GACGTTCATG GTGGCGCTGG ACACCGGGAG TGACCTCTTC 
    TGGCTGCCGT GCCAGTGTGA TGGGTGTACG CCGCCGGCTT CGGCCGCTTC TGGATCGGCT 
    TCCTTTTACA TCCCTAGTAT GTCGTCAACA AGCCAAGCAG TTCCTTGCAA CAGCCAATTT 
    TGTGAGCTGA GAAAGGAATG CTCTACAACA TCACAGTGTC CATACAAGAT GGTTTATGTT 
    TCTGCAGACA CATCTTCTTC TGGTTTTCTA GTAGAGGATG TGCTCTACTT GTCAACAGAG 
    GATGCCATTC CTCAAATTCT CAAGGCGCAA ATACTATTTG GATGTGGACA GGTTCAGACA 
    GGATCATTTC TGGATGCTGC TGCTCCAAAC GGTCTATTTG GACTTGGGAT AGATATGATA 
    TCAATTCCTA GCATTCTAGC ACAAAAAGGT CTGACATCTA ATTCCTTCGC AATGTGCTTT 
    AGCCGTGATG GTATTGGGAG AATTAGCTTT GGAGATCAAG GCAGCTCAGA TCAAGAGGAG 
    ACACCACTAG ATGTTAACCC ACAACATCCT ACATATACGA TCAGCATCAG TGAGATTACA 
    GTTGGAAATA GCCTCACGGA CTTGGAATTT AGTACTATTT TCGACACAGG AACGTCGTTC 
    ACATACTTGG CAGACCCAGC TTATACATAT ATAACACAGA GTTTCCACGC ACAAGTTCAT 
    GCAAATCGCC ATGCCGCTGA CTCAAGAATT CCTTTTGAAT ATTGCTATGA TCTGAGCTCC 
    AGTGAAGATA GGATTCAAAC TCCTAGTATA AGTTTGAGAA CAGTGGGTGG AAGTGTATTT 
    CCCGTTATTG ATGAAGGGCA GGTTATCTCC ATTCAGCAAC ATGAGTATGT TTATTGCTTG 
    GCGATTGTCA AGAGTGCAAA ACTCAATATA ATTGGGCAAA ATTTCATGAC TGGTCTTCGT 
    GTTGTGTTCG ATCGAGAAAG GAAAATTCTT GGTTGGAAGA AATTCAATTG TTATGACACT 
    GATAGTTCAA ATCCTCTTTC TATCAATTCA CGGAATTCTT CAGGTTTCTC CCCTTCAGCA 
    CCTGAGAATT ACTCCCCCGA GGAAACAAAG GGTGGGAACC CAGCAAGCGT TACACAGTTG 
    AGACCCCTTA GTAATTCCAA CCCAGTAATG TGGTATGATA GTTTAGTCTT CAGGTTTCTT 
    TTGGTCAATT TGGCCGCTCT GATCCTCTTC TAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_015636453.1
    CDS195..1787
    Translation

    Target ORF information:

    RefSeq Version XM_015780967.1
    Organism Oryza sativa Japonica Group(Japanese rice)
    Definition Oryza sativa Japonica Group aspartic proteinase-like protein 1 (LOC4335219), transcript variant X1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_015780967.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    ATGTCATCCT TCCAGCTTCT CCTCCACTCC TTGCTCTTGC TTCTCGTCGT TGGCGGCGTC 
    GCGGGCGGCG GCGGCGGAGG TGGTCGCCTG AGGGCGCCTT CGCTGGAATT CCACCACCGG 
    TTCTCTTCTC CGGTGCAGCG GTGGGCGGAG GCGCGCGGGC ACGTGCTCCC CGGAGGCTGG 
    CCGGAGCACG GCAGCGCCGA TTACGTTGCG GCCCTGAACG GGCACGACCG CCGCCGCGCG 
    CTCTCAGCAG CCGGCGGCGA CGGTGGAGGA GGAGGAGACA AGCCCCCGCC GCTCACGTTT 
    TCTGAGGGAA ACGCCACCCT CAAGGTCAGC AACCTCGGAT TCTTGCACTA TGCGCTTGTG 
    ACGGTCGGCA CGCCGGGCCA GACGTTCATG GTGGCGCTGG ACACCGGGAG TGACCTCTTC 
    TGGCTGCCGT GCCAGTGTGA TGGGTGTACG CCGCCGGCTT CGGCCGCTTC TGGATCGGCT 
    TCCTTTTACA TCCCTAGTAT GTCGTCAACA AGCCAAGCAG TTCCTTGCAA CAGCCAATTT 
    TGTGAGCTGA GAAAGGAATG CTCTACAACA TCACAGTGTC CATACAAGAT GGTTTATGTT 
    TCTGCAGACA CATCTTCTTC TGGTTTTCTA GTAGAGGATG TGCTCTACTT GTCAACAGAG 
    GATGCCATTC CTCAAATTCT CAAGGCGCAA ATACTATTTG GATGTGGACA GGTTCAGACA 
    GGATCATTTC TGGATGCTGC TGCTCCAAAC GGTCTATTTG GACTTGGGAT AGATATGATA 
    TCAATTCCTA GCATTCTAGC ACAAAAAGGT CTGACATCTA ATTCCTTCGC AATGTGCTTT 
    AGCCGTGATG GTATTGGGAG AATTAGCTTT GGAGATCAAG GCAGCTCAGA TCAAGAGGAG 
    ACACCACTAG ATGTTAACCC ACAACATCCT ACATATACGA TCAGCATCAG TGAGATTACA 
    GTTGGAAATA GCCTCACGGA CTTGGAATTT AGTACTATTT TCGACACAGG AACGTCGTTC 
    ACATACTTGG CAGACCCAGC TTATACATAT ATAACACAGA GTTTCCACGC ACAAGTTCAT 
    GCAAATCGCC ATGCCGCTGA CTCAAGAATT CCTTTTGAAT ATTGCTATGA TCTGAGCTCC 
    AGTGAAGATA GGATTCAAAC TCCTAGTATA AGTTTGAGAA CAGTGGGTGG AAGTGTATTT 
    CCCGTTATTG ATGAAGGGCA GGTTATCTCC ATTCAGCAAC ATGAGTATGT TTATTGCTTG 
    GCGATTGTCA AGAGTGCAAA ACTCAATATA ATTGGGCAAA ATTTCATGAC TGGTCTTCGT 
    GTTGTGTTCG ATCGAGAAAG GAAAATTCTT GGTTGGAAGA AATTCAATTG TTATGACACT 
    GATAGTTCAA ATCCTCTTTC TATCAATTCA CGGAATTCTT CAGGTTTCTC CCCTTCAGCA 
    CCTGAGAATT ACTCCCCCGA GGAAACAAAG GGTGGGAACC CAGCAAGCGT TACACAGTTG 
    AGACCCCTTA GTAATTCCAA CCCAGTAATG TGGTATGATA GTTTAGTCTT CAGGTTTCTT 
    TTGGTCAATT TGGCCGCTCT GATCCTCTTC TAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC4335219 ( XM_015780967.2 ) cDNA ORF clone, Oryza sativa Japonica Group(Japanese rice) -> XP_015636453.1 Oryza sativa Japonica Group aspartyl protease family protein 1 (LOC4335219), transcript variant X1, mRNA.
    Price & Availability↑
    CloneID OOa09361
    Clone ID Related Accession (Same CDS sequence) XM_015780967.1 , XM_015780967.2
    Accession Version XM_015780967.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1593bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2018-08-06
    Organism Oryza sativa Japonica Group(Japanese rice)
    Product aspartyl protease family protein 1 isoform X1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_029259.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 7, 2018 this sequence version replaced XM_015780967.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Oryza sativa Japonica Group Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    ATGTCATCCT TCCAGCTTCT CCTCCACTCC TTGCTCTTGC TTCTCGTCGT TGGCGGCGTC 
    GCGGGCGGCG GCGGCGGAGG TGGTCGCCTG AGGGCGCCTT CGCTGGAATT CCACCACCGG 
    TTCTCTTCTC CGGTGCAGCG GTGGGCGGAG GCGCGCGGGC ACGTGCTCCC CGGAGGCTGG 
    CCGGAGCACG GCAGCGCCGA TTACGTTGCG GCCCTGAACG GGCACGACCG CCGCCGCGCG 
    CTCTCAGCAG CCGGCGGCGA CGGTGGAGGA GGAGGAGACA AGCCCCCGCC GCTCACGTTT 
    TCTGAGGGAA ACGCCACCCT CAAGGTCAGC AACCTCGGAT TCTTGCACTA TGCGCTTGTG 
    ACGGTCGGCA CGCCGGGCCA GACGTTCATG GTGGCGCTGG ACACCGGGAG TGACCTCTTC 
    TGGCTGCCGT GCCAGTGTGA TGGGTGTACG CCGCCGGCTT CGGCCGCTTC TGGATCGGCT 
    TCCTTTTACA TCCCTAGTAT GTCGTCAACA AGCCAAGCAG TTCCTTGCAA CAGCCAATTT 
    TGTGAGCTGA GAAAGGAATG CTCTACAACA TCACAGTGTC CATACAAGAT GGTTTATGTT 
    TCTGCAGACA CATCTTCTTC TGGTTTTCTA GTAGAGGATG TGCTCTACTT GTCAACAGAG 
    GATGCCATTC CTCAAATTCT CAAGGCGCAA ATACTATTTG GATGTGGACA GGTTCAGACA 
    GGATCATTTC TGGATGCTGC TGCTCCAAAC GGTCTATTTG GACTTGGGAT AGATATGATA 
    TCAATTCCTA GCATTCTAGC ACAAAAAGGT CTGACATCTA ATTCCTTCGC AATGTGCTTT 
    AGCCGTGATG GTATTGGGAG AATTAGCTTT GGAGATCAAG GCAGCTCAGA TCAAGAGGAG 
    ACACCACTAG ATGTTAACCC ACAACATCCT ACATATACGA TCAGCATCAG TGAGATTACA 
    GTTGGAAATA GCCTCACGGA CTTGGAATTT AGTACTATTT TCGACACAGG AACGTCGTTC 
    ACATACTTGG CAGACCCAGC TTATACATAT ATAACACAGA GTTTCCACGC ACAAGTTCAT 
    GCAAATCGCC ATGCCGCTGA CTCAAGAATT CCTTTTGAAT ATTGCTATGA TCTGAGCTCC 
    AGTGAAGATA GGATTCAAAC TCCTAGTATA AGTTTGAGAA CAGTGGGTGG AAGTGTATTT 
    CCCGTTATTG ATGAAGGGCA GGTTATCTCC ATTCAGCAAC ATGAGTATGT TTATTGCTTG 
    GCGATTGTCA AGAGTGCAAA ACTCAATATA ATTGGGCAAA ATTTCATGAC TGGTCTTCGT 
    GTTGTGTTCG ATCGAGAAAG GAAAATTCTT GGTTGGAAGA AATTCAATTG TTATGACACT 
    GATAGTTCAA ATCCTCTTTC TATCAATTCA CGGAATTCTT CAGGTTTCTC CCCTTCAGCA 
    CCTGAGAATT ACTCCCCCGA GGAAACAAAG GGTGGGAACC CAGCAAGCGT TACACAGTTG 
    AGACCCCTTA GTAATTCCAA CCCAGTAATG TGGTATGATA GTTTAGTCTT CAGGTTTCTT 
    TTGGTCAATT TGGCCGCTCT GATCCTCTTC TAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_015636453.1
    CDS198..1790
    Translation

    Target ORF information:

    RefSeq Version XM_015780967.2
    Organism Oryza sativa Japonica Group(Japanese rice)
    Definition Oryza sativa Japonica Group aspartyl protease family protein 1 (LOC4335219), transcript variant X1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_015780967.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    ATGTCATCCT TCCAGCTTCT CCTCCACTCC TTGCTCTTGC TTCTCGTCGT TGGCGGCGTC 
    GCGGGCGGCG GCGGCGGAGG TGGTCGCCTG AGGGCGCCTT CGCTGGAATT CCACCACCGG 
    TTCTCTTCTC CGGTGCAGCG GTGGGCGGAG GCGCGCGGGC ACGTGCTCCC CGGAGGCTGG 
    CCGGAGCACG GCAGCGCCGA TTACGTTGCG GCCCTGAACG GGCACGACCG CCGCCGCGCG 
    CTCTCAGCAG CCGGCGGCGA CGGTGGAGGA GGAGGAGACA AGCCCCCGCC GCTCACGTTT 
    TCTGAGGGAA ACGCCACCCT CAAGGTCAGC AACCTCGGAT TCTTGCACTA TGCGCTTGTG 
    ACGGTCGGCA CGCCGGGCCA GACGTTCATG GTGGCGCTGG ACACCGGGAG TGACCTCTTC 
    TGGCTGCCGT GCCAGTGTGA TGGGTGTACG CCGCCGGCTT CGGCCGCTTC TGGATCGGCT 
    TCCTTTTACA TCCCTAGTAT GTCGTCAACA AGCCAAGCAG TTCCTTGCAA CAGCCAATTT 
    TGTGAGCTGA GAAAGGAATG CTCTACAACA TCACAGTGTC CATACAAGAT GGTTTATGTT 
    TCTGCAGACA CATCTTCTTC TGGTTTTCTA GTAGAGGATG TGCTCTACTT GTCAACAGAG 
    GATGCCATTC CTCAAATTCT CAAGGCGCAA ATACTATTTG GATGTGGACA GGTTCAGACA 
    GGATCATTTC TGGATGCTGC TGCTCCAAAC GGTCTATTTG GACTTGGGAT AGATATGATA 
    TCAATTCCTA GCATTCTAGC ACAAAAAGGT CTGACATCTA ATTCCTTCGC AATGTGCTTT 
    AGCCGTGATG GTATTGGGAG AATTAGCTTT GGAGATCAAG GCAGCTCAGA TCAAGAGGAG 
    ACACCACTAG ATGTTAACCC ACAACATCCT ACATATACGA TCAGCATCAG TGAGATTACA 
    GTTGGAAATA GCCTCACGGA CTTGGAATTT AGTACTATTT TCGACACAGG AACGTCGTTC 
    ACATACTTGG CAGACCCAGC TTATACATAT ATAACACAGA GTTTCCACGC ACAAGTTCAT 
    GCAAATCGCC ATGCCGCTGA CTCAAGAATT CCTTTTGAAT ATTGCTATGA TCTGAGCTCC 
    AGTGAAGATA GGATTCAAAC TCCTAGTATA AGTTTGAGAA CAGTGGGTGG AAGTGTATTT 
    CCCGTTATTG ATGAAGGGCA GGTTATCTCC ATTCAGCAAC ATGAGTATGT TTATTGCTTG 
    GCGATTGTCA AGAGTGCAAA ACTCAATATA ATTGGGCAAA ATTTCATGAC TGGTCTTCGT 
    GTTGTGTTCG ATCGAGAAAG GAAAATTCTT GGTTGGAAGA AATTCAATTG TTATGACACT 
    GATAGTTCAA ATCCTCTTTC TATCAATTCA CGGAATTCTT CAGGTTTCTC CCCTTCAGCA 
    CCTGAGAATT ACTCCCCCGA GGAAACAAAG GGTGGGAACC CAGCAAGCGT TACACAGTTG 
    AGACCCCTTA GTAATTCCAA CCCAGTAATG TGGTATGATA GTTTAGTCTT CAGGTTTCTT 
    TTGGTCAATT TGGCCGCTCT GATCCTCTTC TAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC4335219 ( XM_015780969.2 ) cDNA ORF clone, Oryza sativa Japonica Group(Japanese rice) -> XP_015636455.1 Oryza sativa Japonica Group aspartyl protease family protein 1 (LOC4335219), transcript variant X2, mRNA.
    Price & Availability↑
    CloneID OOa32630
    Clone ID Related Accession (Same CDS sequence) XM_015780969.2 , XM_015780969.1
    Accession Version XM_015780969.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1539bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2018-08-06
    Organism Oryza sativa Japonica Group(Japanese rice)
    Product aspartyl protease family protein 1 isoform X2
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_029259.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 7, 2018 this sequence version replaced XM_015780969.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Oryza sativa Japonica Group Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    ATGTCATCCT TCCAGCTTCT CCTCCACTCC TTGCTCTTGC TTCTCGTCGT TGGCGGCGTC 
    GCGGGCGGCG GCGGCGGAGG TGGTCGCCTG AGGGCGCCTT CGCTGGAATT CCACCACCGG 
    TTCTCTTCTC CGGTGCAGCG GTGGGCGGAG GCGCGCGGGC ACGTGCTCCC CGGAGGCTGG 
    CCGGAGCACG GCAGCGCCGA TTACGTTGCG GCCCTGAACG GGCACGACCG CCGCCGCGCG 
    CTCTCAGCAG CCGGCGGCGA CGGTGGAGGA GGAGGAGACA AGCCCCCGCC GCTCACGTTT 
    TCTGAGGGAA ACGCCACCCT CAAGGTCAGC AACCTCGGAT TCTTGCACTA TGCGCTTGTG 
    ACGGTCGGCA CGCCGGGCCA GACGTTCATG GTGGCGCTGG ACACCGGGAG TGACCTCTTC 
    TGGCTGCCGT GCCAGTGTGA TGGGTGTACG CCGCCGGCTT CGGCCGCTTC TGGATCGGCT 
    TCCTTTTACA TCCCTAGTAT GTCGTCAACA AGCCAAGCAG TTCCTTGCAA CAGCCAATTT 
    TGTGAGCTGA GAAAGGAATG CTCTACAACA TCACAGTGTC CATACAAGAT GGTTTATGTT 
    TCTGCAGACA CATCTTCTTC TGGTTTTCTA GTAGAGGATG TGCTCTACTT GTCAACAGAG 
    GATGCCATTC CTCAAATTCT CAAGGCGCAA ATACTATTTG GATGTGGACA GGTTCAGACA 
    GGATCATTTC TGGATGCTGC TGCTCCAAAC GGTCTATTTG GACTTGGGAT AGATATGATA 
    TCAATTCCTA GCATTCTAGC ACAAAAAGGT CTGACATCTA ATTCCTTCGC AATGTGCTTT 
    AGCCGTGATG GTATTGGGAG AATTAGCTTT GGAGATCAAG GCAGCTCAGA TCAAGAGGAG 
    ACACCACTAG ATGTTAACCC ACAACATCCT ACATATACGA TCAGCATCAG TGAGATTACA 
    GTTGGAAATA GCCTCACGGA CTTGGAATTT AGTACTATTT TCGACACAGG AACGTCGTTC 
    ACATACTTGG CAGACCCAGC TTATACATAT ATAACACAGA GTTTCCACGC ACAAGTTCAT 
    GCAAATCGCC ATGCCGCTGA CTCAAGAATT CCTTTTGAAT ATTGCTATGA TCTGAGCTCC 
    AGTGAAGATA GGATTCAAAC TCCTAGTATA AGTTTGAGAA CAGTGGGTGG AAGTGTATTT 
    CCCGTTATTG ATGAAGGGCA GGTTATCTCC ATTCAGCAAC ATGAGTATGT TTATTGCTTG 
    GCGATTGTCA AGAGTGCAAA ACTCAATATA ATTGGGCAAA ATTTCATGAC TGGTCTTCGT 
    GTTGTGTTCG ATCGAGAAAG GAAAATTCTT GGTTGGAAGA AATTCAATTG TTTCTCCCCT 
    TCAGCACCTG AGAATTACTC CCCCGAGGAA ACAAAGGGTG GGAACCCAGC AAGCGTTACA 
    CAGTTGAGAC CCCTTAGTAA TTCCAACCCA GTAATGTGGT ATGATAGTTT AGTCTTCAGG 
    TTTCTTTTGG TCAATTTGGC CGCTCTGATC CTCTTCTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_015636455.1
    CDS201..1739
    Translation

    Target ORF information:

    RefSeq Version XM_015780969.2
    Organism Oryza sativa Japonica Group(Japanese rice)
    Definition Oryza sativa Japonica Group aspartyl protease family protein 1 (LOC4335219), transcript variant X2, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_015780969.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    ATGTCATCCT TCCAGCTTCT CCTCCACTCC TTGCTCTTGC TTCTCGTCGT TGGCGGCGTC 
    GCGGGCGGCG GCGGCGGAGG TGGTCGCCTG AGGGCGCCTT CGCTGGAATT CCACCACCGG 
    TTCTCTTCTC CGGTGCAGCG GTGGGCGGAG GCGCGCGGGC ACGTGCTCCC CGGAGGCTGG 
    CCGGAGCACG GCAGCGCCGA TTACGTTGCG GCCCTGAACG GGCACGACCG CCGCCGCGCG 
    CTCTCAGCAG CCGGCGGCGA CGGTGGAGGA GGAGGAGACA AGCCCCCGCC GCTCACGTTT 
    TCTGAGGGAA ACGCCACCCT CAAGGTCAGC AACCTCGGAT TCTTGCACTA TGCGCTTGTG 
    ACGGTCGGCA CGCCGGGCCA GACGTTCATG GTGGCGCTGG ACACCGGGAG TGACCTCTTC 
    TGGCTGCCGT GCCAGTGTGA TGGGTGTACG CCGCCGGCTT CGGCCGCTTC TGGATCGGCT 
    TCCTTTTACA TCCCTAGTAT GTCGTCAACA AGCCAAGCAG TTCCTTGCAA CAGCCAATTT 
    TGTGAGCTGA GAAAGGAATG CTCTACAACA TCACAGTGTC CATACAAGAT GGTTTATGTT 
    TCTGCAGACA CATCTTCTTC TGGTTTTCTA GTAGAGGATG TGCTCTACTT GTCAACAGAG 
    GATGCCATTC CTCAAATTCT CAAGGCGCAA ATACTATTTG GATGTGGACA GGTTCAGACA 
    GGATCATTTC TGGATGCTGC TGCTCCAAAC GGTCTATTTG GACTTGGGAT AGATATGATA 
    TCAATTCCTA GCATTCTAGC ACAAAAAGGT CTGACATCTA ATTCCTTCGC AATGTGCTTT 
    AGCCGTGATG GTATTGGGAG AATTAGCTTT GGAGATCAAG GCAGCTCAGA TCAAGAGGAG 
    ACACCACTAG ATGTTAACCC ACAACATCCT ACATATACGA TCAGCATCAG TGAGATTACA 
    GTTGGAAATA GCCTCACGGA CTTGGAATTT AGTACTATTT TCGACACAGG AACGTCGTTC 
    ACATACTTGG CAGACCCAGC TTATACATAT ATAACACAGA GTTTCCACGC ACAAGTTCAT 
    GCAAATCGCC ATGCCGCTGA CTCAAGAATT CCTTTTGAAT ATTGCTATGA TCTGAGCTCC 
    AGTGAAGATA GGATTCAAAC TCCTAGTATA AGTTTGAGAA CAGTGGGTGG AAGTGTATTT 
    CCCGTTATTG ATGAAGGGCA GGTTATCTCC ATTCAGCAAC ATGAGTATGT TTATTGCTTG 
    GCGATTGTCA AGAGTGCAAA ACTCAATATA ATTGGGCAAA ATTTCATGAC TGGTCTTCGT 
    GTTGTGTTCG ATCGAGAAAG GAAAATTCTT GGTTGGAAGA AATTCAATTG TTTCTCCCCT 
    TCAGCACCTG AGAATTACTC CCCCGAGGAA ACAAAGGGTG GGAACCCAGC AAGCGTTACA 
    CAGTTGAGAC CCCTTAGTAA TTCCAACCCA GTAATGTGGT ATGATAGTTT AGTCTTCAGG 
    TTTCTTTTGG TCAATTTGGC CGCTCTGATC CTCTTCTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC4335219 ( XM_015780969.1 ) cDNA ORF clone, Oryza sativa Japonica Group(Japanese rice) -> XP_015636455.1 Oryza sativa Japonica Group aspartic proteinase-like protein 1 (LOC4335219), transcript variant X2, mRNA.
    Price & Availability↑
    CloneID OOa32630
    Clone ID Related Accession (Same CDS sequence) XM_015780969.2 , XM_015780969.1
    Accession Version XM_015780969.1 Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1539bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2016-02-29
    Organism Oryza sativa Japonica Group(Japanese rice)
    Product aspartic proteinase-like protein 1 isoform X2
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_015379177.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Oryza sativa Japonica Group Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    ATGTCATCCT TCCAGCTTCT CCTCCACTCC TTGCTCTTGC TTCTCGTCGT TGGCGGCGTC 
    GCGGGCGGCG GCGGCGGAGG TGGTCGCCTG AGGGCGCCTT CGCTGGAATT CCACCACCGG 
    TTCTCTTCTC CGGTGCAGCG GTGGGCGGAG GCGCGCGGGC ACGTGCTCCC CGGAGGCTGG 
    CCGGAGCACG GCAGCGCCGA TTACGTTGCG GCCCTGAACG GGCACGACCG CCGCCGCGCG 
    CTCTCAGCAG CCGGCGGCGA CGGTGGAGGA GGAGGAGACA AGCCCCCGCC GCTCACGTTT 
    TCTGAGGGAA ACGCCACCCT CAAGGTCAGC AACCTCGGAT TCTTGCACTA TGCGCTTGTG 
    ACGGTCGGCA CGCCGGGCCA GACGTTCATG GTGGCGCTGG ACACCGGGAG TGACCTCTTC 
    TGGCTGCCGT GCCAGTGTGA TGGGTGTACG CCGCCGGCTT CGGCCGCTTC TGGATCGGCT 
    TCCTTTTACA TCCCTAGTAT GTCGTCAACA AGCCAAGCAG TTCCTTGCAA CAGCCAATTT 
    TGTGAGCTGA GAAAGGAATG CTCTACAACA TCACAGTGTC CATACAAGAT GGTTTATGTT 
    TCTGCAGACA CATCTTCTTC TGGTTTTCTA GTAGAGGATG TGCTCTACTT GTCAACAGAG 
    GATGCCATTC CTCAAATTCT CAAGGCGCAA ATACTATTTG GATGTGGACA GGTTCAGACA 
    GGATCATTTC TGGATGCTGC TGCTCCAAAC GGTCTATTTG GACTTGGGAT AGATATGATA 
    TCAATTCCTA GCATTCTAGC ACAAAAAGGT CTGACATCTA ATTCCTTCGC AATGTGCTTT 
    AGCCGTGATG GTATTGGGAG AATTAGCTTT GGAGATCAAG GCAGCTCAGA TCAAGAGGAG 
    ACACCACTAG ATGTTAACCC ACAACATCCT ACATATACGA TCAGCATCAG TGAGATTACA 
    GTTGGAAATA GCCTCACGGA CTTGGAATTT AGTACTATTT TCGACACAGG AACGTCGTTC 
    ACATACTTGG CAGACCCAGC TTATACATAT ATAACACAGA GTTTCCACGC ACAAGTTCAT 
    GCAAATCGCC ATGCCGCTGA CTCAAGAATT CCTTTTGAAT ATTGCTATGA TCTGAGCTCC 
    AGTGAAGATA GGATTCAAAC TCCTAGTATA AGTTTGAGAA CAGTGGGTGG AAGTGTATTT 
    CCCGTTATTG ATGAAGGGCA GGTTATCTCC ATTCAGCAAC ATGAGTATGT TTATTGCTTG 
    GCGATTGTCA AGAGTGCAAA ACTCAATATA ATTGGGCAAA ATTTCATGAC TGGTCTTCGT 
    GTTGTGTTCG ATCGAGAAAG GAAAATTCTT GGTTGGAAGA AATTCAATTG TTTCTCCCCT 
    TCAGCACCTG AGAATTACTC CCCCGAGGAA ACAAAGGGTG GGAACCCAGC AAGCGTTACA 
    CAGTTGAGAC CCCTTAGTAA TTCCAACCCA GTAATGTGGT ATGATAGTTT AGTCTTCAGG 
    TTTCTTTTGG TCAATTTGGC CGCTCTGATC CTCTTCTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_015636455.1
    CDS195..1733
    Translation

    Target ORF information:

    RefSeq Version XM_015780969.1
    Organism Oryza sativa Japonica Group(Japanese rice)
    Definition Oryza sativa Japonica Group aspartic proteinase-like protein 1 (LOC4335219), transcript variant X2, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_015780969.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    ATGTCATCCT TCCAGCTTCT CCTCCACTCC TTGCTCTTGC TTCTCGTCGT TGGCGGCGTC 
    GCGGGCGGCG GCGGCGGAGG TGGTCGCCTG AGGGCGCCTT CGCTGGAATT CCACCACCGG 
    TTCTCTTCTC CGGTGCAGCG GTGGGCGGAG GCGCGCGGGC ACGTGCTCCC CGGAGGCTGG 
    CCGGAGCACG GCAGCGCCGA TTACGTTGCG GCCCTGAACG GGCACGACCG CCGCCGCGCG 
    CTCTCAGCAG CCGGCGGCGA CGGTGGAGGA GGAGGAGACA AGCCCCCGCC GCTCACGTTT 
    TCTGAGGGAA ACGCCACCCT CAAGGTCAGC AACCTCGGAT TCTTGCACTA TGCGCTTGTG 
    ACGGTCGGCA CGCCGGGCCA GACGTTCATG GTGGCGCTGG ACACCGGGAG TGACCTCTTC 
    TGGCTGCCGT GCCAGTGTGA TGGGTGTACG CCGCCGGCTT CGGCCGCTTC TGGATCGGCT 
    TCCTTTTACA TCCCTAGTAT GTCGTCAACA AGCCAAGCAG TTCCTTGCAA CAGCCAATTT 
    TGTGAGCTGA GAAAGGAATG CTCTACAACA TCACAGTGTC CATACAAGAT GGTTTATGTT 
    TCTGCAGACA CATCTTCTTC TGGTTTTCTA GTAGAGGATG TGCTCTACTT GTCAACAGAG 
    GATGCCATTC CTCAAATTCT CAAGGCGCAA ATACTATTTG GATGTGGACA GGTTCAGACA 
    GGATCATTTC TGGATGCTGC TGCTCCAAAC GGTCTATTTG GACTTGGGAT AGATATGATA 
    TCAATTCCTA GCATTCTAGC ACAAAAAGGT CTGACATCTA ATTCCTTCGC AATGTGCTTT 
    AGCCGTGATG GTATTGGGAG AATTAGCTTT GGAGATCAAG GCAGCTCAGA TCAAGAGGAG 
    ACACCACTAG ATGTTAACCC ACAACATCCT ACATATACGA TCAGCATCAG TGAGATTACA 
    GTTGGAAATA GCCTCACGGA CTTGGAATTT AGTACTATTT TCGACACAGG AACGTCGTTC 
    ACATACTTGG CAGACCCAGC TTATACATAT ATAACACAGA GTTTCCACGC ACAAGTTCAT 
    GCAAATCGCC ATGCCGCTGA CTCAAGAATT CCTTTTGAAT ATTGCTATGA TCTGAGCTCC 
    AGTGAAGATA GGATTCAAAC TCCTAGTATA AGTTTGAGAA CAGTGGGTGG AAGTGTATTT 
    CCCGTTATTG ATGAAGGGCA GGTTATCTCC ATTCAGCAAC ATGAGTATGT TTATTGCTTG 
    GCGATTGTCA AGAGTGCAAA ACTCAATATA ATTGGGCAAA ATTTCATGAC TGGTCTTCGT 
    GTTGTGTTCG ATCGAGAAAG GAAAATTCTT GGTTGGAAGA AATTCAATTG TTTCTCCCCT 
    TCAGCACCTG AGAATTACTC CCCCGAGGAA ACAAAGGGTG GGAACCCAGC AAGCGTTACA 
    CAGTTGAGAC CCCTTAGTAA TTCCAACCCA GTAATGTGGT ATGATAGTTT AGTCTTCAGG 
    TTTCTTTTGG TCAATTTGGC CGCTCTGATC CTCTTCTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

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