LOC108245535 cDNA ORF clone, Kryptolebias marmoratus(mangrove rivulus)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC108245535
Entrez Gene ID	108245535
Full Name	paired box protein Pax-3-like
Gene Type	protein-coding
Organism	Kryptolebias marmoratus(mangrove rivulus)

mRNA and Protein(s)

mRNA	Protein	Name
XM_017432542.1	XP_017288031.1	paired box protein Pax-3-like isoform X2
XM_017432541.1	XP_017288030.1	paired box protein Pax-3-like isoform X1

Pathways from BioSystems
Gene Ontology

The following LOC108245535 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC108245535 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OKr25202	XM_017432541.1 Latest version!	Kryptolebias marmoratus paired box protein Pax-3-like (LOC108245535), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$258.30 $369.00
OKr25203	XM_017432542.1 Latest version!	Kryptolebias marmoratus paired box protein Pax-3-like (LOC108245535), transcript variant X2, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$258.30 $369.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC108245535 ( XM_017432541.1 ) cDNA ORF clone, Kryptolebias marmoratus(mangrove rivulus) -> XP_017288030.1 Kryptolebias marmoratus paired box protein Pax-3-like (LOC108245535), transcript variant X1, mRNA.

Price & Availability↑

CloneID	OKr25202
Clone ID Related Accession (Same CDS sequence)	XM_017432541.1
Accession Version	XM_017432541.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1482bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2018-05-03
Organism	Kryptolebias marmoratus(mangrove rivulus)
Product	paired box protein Pax-3-like isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_016094416.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Kryptolebias marmoratus Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGCGGCGC TCGCAGGAGG TTTACCGAGA ATGATGAGAC CCACTCCTCA CCAGAACTAC 
CCGCGGGGAG GATACTCTCT GGAAGTTTCC ACGCCGTTGG GACAGGGTCG GGTCAACCAG 
CTCGGTGGGG TCTTCATCAA CGGCAGACCT CTCCCCAACC ACATCCGCCA CAAAATCGTG 
GAGATGGCCC ATCACGGCAT CCGGCCGTGC GTCATCTCCC GTCAGCTCAG AGTGTCCCAC 
GGCTGCGTGT CCAAAATCCT CTGCAGGTAC CAGGAAACGG GCTCCATCAG GCCCGGAGCC 
ATCGGAGGCA GCAAGCCAAA GCAAACCGCT TCTCCAGAAG TGGATAAGAA AATCGAGGAG 
TACAAGAGAG AAAATCCCGG CATGTTCAGC TGGGAAATCA GGGACAAGCT GCTAAAAGAT 
GGCATCTGTG ACAGAAACAC CGTCCCTTCA GTGAGCGCCA TCAGCCGCGT CATGCGCTCT 
AAATTCGGCG GAATCGGCGA GGAAGAGGAG GAAGACGAAG AAGCCGTGAG GAGAACGATG 
GACGAGAACG AGCCGCGGAC AAAACACAGC ATCGATGGCA TCTTAGGAGA CAGATCCAGT 
CACTCAGATG AGGGCTCCGA CGTGGACTCT GAGCCGGGCC TCCCTTTAAA GAGGAAGCAG 
CGCCGCAGTC GGACCACCTT CACTGCGGAG CAACTGGAGG AGCTGGAAAG GGCCTTTGAA 
CGCACACACT ACCCTGACAT CTATACACGA GAGGAGCTGG CTCAGAGGGC CAAATTGACC 
GAGGCTCGAG TTCAGGTGTG GTTCAGTAAC AGAAGAGCCC GGTGGAGGAA GCAAGCAGGA 
GCCAATCAGC TGATGGCCTT CAACCACCTC ATACCTGGCG GTTTTCCTCC ATCAGCTATG 
CCAGGCCTGC AGCCTTATCA GCTGTCAGAC AGCCCCTACC CTCCATCTTC TATTGCCCAA 
GAACTTTTCT TCCCAGCCAC CTCTGAGCAG TCTGGTACCG TCCATCGACC GCAGCCTTTG 
CCGCCAACCT CCGTGCACCA GACTGGAATC AGCTCATCCG CAACTTCCCA GGACGGAGGC 
TCGGCATACT GCCTTTCCTC TGGGCGACAC AACTTCTCAG GATACTCGGA CAGCTTCGTG 
ACCCCAGCAG GACACACTGG CCCTGTTAAC CCCAGCATCA GCAACAGCCT CTCACCACAG 
GTGATGGGCC TGTTGAACCC AAGTGGAGTC CCACATCAGT CTCAGAGTGA CTTTGCCCTC 
TCTCCCCTCA CCGGAGGCAT TGAGCCTAAT GGAGCAATGG CTGCTAGCTG TCATGGTTCC 
CAGCGACTGG AGGCTCTCCC GAGCCTGACC AACATGCCTG CCCTACCCAG CACTCAGTCT 
TACTGCCCAC CTTCCTACAC CTCCCCAGCC TATGCCGTAG ACCATCACCC CACCTACCAG 
TACGGACAGT ACAGTCAGAG CAAGGTGCCT TTCATTATAT GA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_017288030.1
CDS	299..1780
Translation	MAALAGGLPRMMRPTPHQNYPRGGYSLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQTASPEVDKKIEEYKRENPGMFSWEIRDKLLKDGICDRNTVPSVSAISRVMRSKFGGIGEEEEEDEEAVRRTMDENEPRTKHSIDGILGDRSSHSDEGSDVDSEPGLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPSAMPGLQPYQLSDSPYPPSSIAQELFFPATSEQSGTVHRPQPLPPTSVHQTGISSSATSQDGGSAYCLSSGRHNFSGYSDSFVTPAGHTGPVNPSISNSLSPQVMGLLNPSGVPHQSQSDFALSPLTGGIEPNGAMAASCHGSQRLEALPSLTNMPALPSTQSYCPPSYTSPAYAVDHHPTYQYGQYSQSKVPFII

Target ORF information:

RefSeq Version	XM_017432541.1
Organism	Kryptolebias marmoratus(mangrove rivulus)
Definition	Kryptolebias marmoratus paired box protein Pax-3-like (LOC108245535), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_017432541.1

ORF Insert Sequence:

ATGGCGGCGC TCGCAGGAGG TTTACCGAGA ATGATGAGAC CCACTCCTCA CCAGAACTAC 
CCGCGGGGAG GATACTCTCT GGAAGTTTCC ACGCCGTTGG GACAGGGTCG GGTCAACCAG 
CTCGGTGGGG TCTTCATCAA CGGCAGACCT CTCCCCAACC ACATCCGCCA CAAAATCGTG 
GAGATGGCCC ATCACGGCAT CCGGCCGTGC GTCATCTCCC GTCAGCTCAG AGTGTCCCAC 
GGCTGCGTGT CCAAAATCCT CTGCAGGTAC CAGGAAACGG GCTCCATCAG GCCCGGAGCC 
ATCGGAGGCA GCAAGCCAAA GCAAACCGCT TCTCCAGAAG TGGATAAGAA AATCGAGGAG 
TACAAGAGAG AAAATCCCGG CATGTTCAGC TGGGAAATCA GGGACAAGCT GCTAAAAGAT 
GGCATCTGTG ACAGAAACAC CGTCCCTTCA GTGAGCGCCA TCAGCCGCGT CATGCGCTCT 
AAATTCGGCG GAATCGGCGA GGAAGAGGAG GAAGACGAAG AAGCCGTGAG GAGAACGATG 
GACGAGAACG AGCCGCGGAC AAAACACAGC ATCGATGGCA TCTTAGGAGA CAGATCCAGT 
CACTCAGATG AGGGCTCCGA CGTGGACTCT GAGCCGGGCC TCCCTTTAAA GAGGAAGCAG 
CGCCGCAGTC GGACCACCTT CACTGCGGAG CAACTGGAGG AGCTGGAAAG GGCCTTTGAA 
CGCACACACT ACCCTGACAT CTATACACGA GAGGAGCTGG CTCAGAGGGC CAAATTGACC 
GAGGCTCGAG TTCAGGTGTG GTTCAGTAAC AGAAGAGCCC GGTGGAGGAA GCAAGCAGGA 
GCCAATCAGC TGATGGCCTT CAACCACCTC ATACCTGGCG GTTTTCCTCC ATCAGCTATG 
CCAGGCCTGC AGCCTTATCA GCTGTCAGAC AGCCCCTACC CTCCATCTTC TATTGCCCAA 
GAACTTTTCT TCCCAGCCAC CTCTGAGCAG TCTGGTACCG TCCATCGACC GCAGCCTTTG 
CCGCCAACCT CCGTGCACCA GACTGGAATC AGCTCATCCG CAACTTCCCA GGACGGAGGC 
TCGGCATACT GCCTTTCCTC TGGGCGACAC AACTTCTCAG GATACTCGGA CAGCTTCGTG 
ACCCCAGCAG GACACACTGG CCCTGTTAAC CCCAGCATCA GCAACAGCCT CTCACCACAG 
GTGATGGGCC TGTTGAACCC AAGTGGAGTC CCACATCAGT CTCAGAGTGA CTTTGCCCTC 
TCTCCCCTCA CCGGAGGCAT TGAGCCTAAT GGAGCAATGG CTGCTAGCTG TCATGGTTCC 
CAGCGACTGG AGGCTCTCCC GAGCCTGACC AACATGCCTG CCCTACCCAG CACTCAGTCT 
TACTGCCCAC CTTCCTACAC CTCCCCAGCC TATGCCGTAG ACCATCACCC CACCTACCAG 
TACGGACAGT ACAGTCAGAG CAAGGTGCCT TTCATTATAT GA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

LOC108245535 ( XM_017432542.1 ) cDNA ORF clone, Kryptolebias marmoratus(mangrove rivulus) -> XP_017288031.1 Kryptolebias marmoratus paired box protein Pax-3-like (LOC108245535), transcript variant X2, mRNA.

Price & Availability↑

CloneID	OKr25203
Clone ID Related Accession (Same CDS sequence)	XM_017432542.1
Accession Version	XM_017432542.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1467bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2018-05-03
Organism	Kryptolebias marmoratus(mangrove rivulus)
Product	paired box protein Pax-3-like isoform X2
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_016094416.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Kryptolebias marmoratus Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGCGGCGC TCGCAGGAGG TTTACCGAGA ATGATGAGAC CCACTCCTCA CCAGAACTAC 
CCGCGGGGAG GATACTCTCT GGAAGTTTCC ACGCCGTTGG GACAGGGTCG GGTCAACCAG 
CTCGGTGGGG TCTTCATCAA CGGCAGACCT CTCCCCAACC ACATCCGCCA CAAAATCGTG 
GAGATGGCCC ATCACGGCAT CCGGCCGTGC GTCATCTCCC GTCAGCTCAG AGTGTCCCAC 
GGCTGCGTGT CCAAAATCCT CTGCAGGTAC CAGGAAACGG GCTCCATCAG GCCCGGAGCC 
ATCGGAGGCA GCAAGCCAAA GCAAACCGCT TCTCCAGAAG TGGATAAGAA AATCGAGGAG 
TACAAGAGAG AAAATCCCGG CATGTTCAGC TGGGAAATCA GGGACAAGCT GCTAAAAGAT 
GGCATCTGTG ACAGAAACAC CGTCCCTTCA GTGAGCGCCA TCAGCCGCGT CATGCGCTCT 
AAATTCGGCG GAATCGGCGA GGAAGAGGAG GAAGACGAAG AAGCCGTGAG GAGAACGATG 
GACGAGAACG AGCCGCGGAC AAAACACAGC ATCGATGGCA TCTTAGGAGA CAGATCCAGT 
CACTCAGATG AGGGCTCCGA CGTGGACTCT GAGCCGGGCC TCCCTTTAAA GAGGAAGCAG 
CGCCGCAGTC GGACCACCTT CACTGCGGAG CAACTGGAGG AGCTGGAAAG GGCCTTTGAA 
CGCACACACT ACCCTGACAT CTATACACGA GAGGAGCTGG CTCAGAGGGC CAAATTGACC 
GAGGCTCGAG TTCAGGTGTG GTTCAGTAAC AGAAGAGCCC GGTGGAGGAA GCAAGCAGGA 
GCCAATCAGC TGATGGCCTT CAACCACCTC ATACCTGGCG GTTTTCCTCC ATCAGCTATG 
CCAGGCCTGC AGCCTTATCA GCTGTCAGAC AGCCCCTACC CTCCATCTTC TATTGCCCAA 
GCCACCTCTG AGCAGTCTGG TACCGTCCAT CGACCGCAGC CTTTGCCGCC AACCTCCGTG 
CACCAGACTG GAATCAGCTC ATCCGCAACT TCCCAGGACG GAGGCTCGGC ATACTGCCTT 
TCCTCTGGGC GACACAACTT CTCAGGATAC TCGGACAGCT TCGTGACCCC AGCAGGACAC 
ACTGGCCCTG TTAACCCCAG CATCAGCAAC AGCCTCTCAC CACAGGTGAT GGGCCTGTTG 
AACCCAAGTG GAGTCCCACA TCAGTCTCAG AGTGACTTTG CCCTCTCTCC CCTCACCGGA 
GGCATTGAGC CTAATGGAGC AATGGCTGCT AGCTGTCATG GTTCCCAGCG ACTGGAGGCT 
CTCCCGAGCC TGACCAACAT GCCTGCCCTA CCCAGCACTC AGTCTTACTG CCCACCTTCC 
TACACCTCCC CAGCCTATGC CGTAGACCAT CACCCCACCT ACCAGTACGG ACAGTACAGT 
CAGAGCAAGG TGCCTTTCAT TATATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_017288031.1
CDS	299..1765
Translation	MAALAGGLPRMMRPTPHQNYPRGGYSLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQTASPEVDKKIEEYKRENPGMFSWEIRDKLLKDGICDRNTVPSVSAISRVMRSKFGGIGEEEEEDEEAVRRTMDENEPRTKHSIDGILGDRSSHSDEGSDVDSEPGLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPSAMPGLQPYQLSDSPYPPSSIAQATSEQSGTVHRPQPLPPTSVHQTGISSSATSQDGGSAYCLSSGRHNFSGYSDSFVTPAGHTGPVNPSISNSLSPQVMGLLNPSGVPHQSQSDFALSPLTGGIEPNGAMAASCHGSQRLEALPSLTNMPALPSTQSYCPPSYTSPAYAVDHHPTYQYGQYSQSKVPFII

Target ORF information:

RefSeq Version	XM_017432542.1
Organism	Kryptolebias marmoratus(mangrove rivulus)
Definition	Kryptolebias marmoratus paired box protein Pax-3-like (LOC108245535), transcript variant X2, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_017432542.1

ORF Insert Sequence:

ATGGCGGCGC TCGCAGGAGG TTTACCGAGA ATGATGAGAC CCACTCCTCA CCAGAACTAC 
CCGCGGGGAG GATACTCTCT GGAAGTTTCC ACGCCGTTGG GACAGGGTCG GGTCAACCAG 
CTCGGTGGGG TCTTCATCAA CGGCAGACCT CTCCCCAACC ACATCCGCCA CAAAATCGTG 
GAGATGGCCC ATCACGGCAT CCGGCCGTGC GTCATCTCCC GTCAGCTCAG AGTGTCCCAC 
GGCTGCGTGT CCAAAATCCT CTGCAGGTAC CAGGAAACGG GCTCCATCAG GCCCGGAGCC 
ATCGGAGGCA GCAAGCCAAA GCAAACCGCT TCTCCAGAAG TGGATAAGAA AATCGAGGAG 
TACAAGAGAG AAAATCCCGG CATGTTCAGC TGGGAAATCA GGGACAAGCT GCTAAAAGAT 
GGCATCTGTG ACAGAAACAC CGTCCCTTCA GTGAGCGCCA TCAGCCGCGT CATGCGCTCT 
AAATTCGGCG GAATCGGCGA GGAAGAGGAG GAAGACGAAG AAGCCGTGAG GAGAACGATG 
GACGAGAACG AGCCGCGGAC AAAACACAGC ATCGATGGCA TCTTAGGAGA CAGATCCAGT 
CACTCAGATG AGGGCTCCGA CGTGGACTCT GAGCCGGGCC TCCCTTTAAA GAGGAAGCAG 
CGCCGCAGTC GGACCACCTT CACTGCGGAG CAACTGGAGG AGCTGGAAAG GGCCTTTGAA 
CGCACACACT ACCCTGACAT CTATACACGA GAGGAGCTGG CTCAGAGGGC CAAATTGACC 
GAGGCTCGAG TTCAGGTGTG GTTCAGTAAC AGAAGAGCCC GGTGGAGGAA GCAAGCAGGA 
GCCAATCAGC TGATGGCCTT CAACCACCTC ATACCTGGCG GTTTTCCTCC ATCAGCTATG 
CCAGGCCTGC AGCCTTATCA GCTGTCAGAC AGCCCCTACC CTCCATCTTC TATTGCCCAA 
GCCACCTCTG AGCAGTCTGG TACCGTCCAT CGACCGCAGC CTTTGCCGCC AACCTCCGTG 
CACCAGACTG GAATCAGCTC ATCCGCAACT TCCCAGGACG GAGGCTCGGC ATACTGCCTT 
TCCTCTGGGC GACACAACTT CTCAGGATAC TCGGACAGCT TCGTGACCCC AGCAGGACAC 
ACTGGCCCTG TTAACCCCAG CATCAGCAAC AGCCTCTCAC CACAGGTGAT GGGCCTGTTG 
AACCCAAGTG GAGTCCCACA TCAGTCTCAG AGTGACTTTG CCCTCTCTCC CCTCACCGGA 
GGCATTGAGC CTAATGGAGC AATGGCTGCT AGCTGTCATG GTTCCCAGCG ACTGGAGGCT 
CTCCCGAGCC TGACCAACAT GCCTGCCCTA CCCAGCACTC AGTCTTACTG CCCACCTTCC 
TACACCTCCC CAGCCTATGC CGTAGACCAT CACCCCACCT ACCAGTACGG ACAGTACAGT 
CAGAGCAAGG TGCCTTTCAT TATATGA