TRIM42 cDNA ORF clone, Homo sapiens(human)

Gene
Clones
gRNAs

Summary

Gene Symbol	TRIM42
Entrez Gene ID	287015
Full Name	tripartite motif containing 42
Synonyms	PPP1R40,T4A1
General protein information	Preferred Names tripartite motif containing 42 Names tripartite motif-containing protein 42 protein phosphatase 1, regulatory subunit 40
Gene Type	protein-coding
Organism	Homo sapiens(human)
Genome	Chromosome: 3 Map Location: 3q23
Summary	This gene encodes a member of the tripartite motif (TRIM) family. The TRIM motif includes three zinc-binding domains, namely a RING, a B-box type 1 and a B-box type 2, and a coiled-coil region. [provided by RefSeq, Jul 2008].

mRNA and Protein(s)

mRNA	Protein	Name
XM_011512740.3	XP_011511042.1	tripartite motif-containing protein 42 isoform X1
NM_152616.4	NP_689829.3	tripartite motif-containing protein 42
XM_011512740.2	XP_011511042.1	tripartite motif-containing protein 42 isoform X1
NM_152616.5	NP_689829.3	tripartite motif-containing protein 42

Pathways from BioSystems

Homologies

Mus musculus (house mouse)	Trim42	NP_084495.2
Pan troglodytes (chimpanzee)	TRIM42	XP_526328.2
Bos taurus (cattle)	TRIM42	XP_002685089.1
Rattus norvegicus (Norway rat)	Trim42	NP_001013977.1
Homo sapiens (human)	TRIM42	NP_689829.3
Gallus gallus (chicken)	TRIM42	XP_422632.4
	TRIM42	XP_001113172.1
Canis lupus familiaris (dog)	TRIM42	XP_534288.2

Gene Ontology
Bibliography

Related articles in PubMed

Widespread Expansion of Protein Interaction Capabilities by Alternative Splicing.
Yang X, Coulombe-Huntington J, Kang S, Sheynkman GM, Hao T, Richardson A, Sun S, Yang F, Shen YA, Murray RR, Spirohn K, Begg BE, Duran-Frigola M, MacWilliams A, Pevzner SJ, Zhong Q, Trigg SA, Tam S, Ghamsari L, Sahni N, Yi S, Rodriguez MD, Balcha D, Tan G, Costanzo M, Andrews B, Boone C, Zhou XJ, Salehi-Ashtiani K, Charloteaux B, Chen AA, Calderwood MA, Aloy P, Roth FP, Hill DE, Iakoucheva LM, Xia Y, Vidal M
Cell164(4)805-17(2016 Feb)

Widespread macromolecular interaction perturbations in human genetic disorders.
Sahni N, Yi S, Taipale M, Fuxman Bass JI, Coulombe-Huntington J, Yang F, Peng J, Weile J, Karras GI, Wang Y, Kov?cs IA, Kamburov A, Krykbaeva I, Lam MH, Tucker G, Khurana V, Sharma A, Liu YY, Yachie N, Zhong Q, Shen Y, Palagi A, San-Miguel A, Fan C, Balcha D, Dricot A, Jordan DM, Walsh JM, Shah AA, Yang X, Stoyanova AK, Leighton A, Calderwood MA, Jacob Y, Cusick ME, Salehi-Ashtiani K, Whitesell LJ, Sunyaev S, Berger B, Barab?si AL, Charloteaux B, Hill DE, Hao T, Roth FP, Xia Y, Walhout AJM, Lindquist S, Vidal M
Cell161(3)647-660(2015 Apr)

Genome-wide association study for refractive astigmatism reveals genetic co-determination with spherical equivalent refractive error: the CREAM consortium.
Li Q, Wojciechowski R, Simpson CL, Hysi PG, Verhoeven VJ, Ikram MK, H?hn R, Vitart V, Hewitt AW, Oexle K, M?kel? KM, MacGregor S, Pirastu M, Fan Q, Cheng CY, St Pourcain B, McMahon G, Kemp JP, Northstone K, Rahi JS, Cumberland PM, Martin NG, Sanfilippo PG, Lu Y, Wang YX, Hayward C, Pola?ek O, Campbell H, Bencic G, Wright AF, Wedenoja J, Zeller T, Schillert A, Mirshahi A, Lackner K, Yip SP, Yap MK, Ried JS, Gieger C, Murgia F, Wilson JF, Fleck B, Yazar S, Vingerling JR, Hofman A, Uitterlinden A, Rivadeneira F, Amin N, Karssen L, Oostra BA, Zhou X, Teo YY, Tai ES, Vithana E, Barathi V, Zheng Y, Siantar RG, Neelam K, Shin Y, Lam J, Yonova-Doing E, Venturini C, Hosseini SM, Wong HS, Lehtim?ki T, K?h?nen M, Raitakari O, Timpson NJ, Evans DM, Khor CC, Aung T, Young TL, Mitchell P, Klein B, van Duijn CM, Meitinger T, Jonas JB, Baird PN, Mackey DA, Wong TY, Saw SM, P?rssinen O, Stambolian D, Hammond CJ, Klaver CC, Williams C, Paterson AD, Bailey-Wilson JE, Guggenheim JA,
Human genetics134(2)131-46(2015 Feb)

Genome-wide association study of bipolar disorder accounting for effect of body mass index identifies a new risk allele in TCF7L2.
Winham SJ, Cuellar-Barboza AB, Oliveros A, McElroy SL, Crow S, Colby C, Choi DS, Chauhan M, Frye M, Biernacka JM
Molecular psychiatry19(9)1010-6(2014 Sep)

The tripartite motif family identifies cell compartments.
Reymond A, Meroni G, Fantozzi A, Merla G, Cairo S, Luzi L, Riganelli D, Zanaria E, Messali S, Cainarca S, Guffanti A, Minucci S, Pelicci PG, Ballabio A
The EMBO journal20(9)2140-51(2001 May)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

Clinical trial of gene-disease association and gene-environment interaction. (HuGE Navigator)
Title: Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score.

The following TRIM42 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the TRIM42 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)
OHu15452	NM_152616.5 Latest version!	Homo sapiens tripartite motif containing 42 (TRIM42), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	in pcDNA3.1-C-(k)DYK	$189.50-$265.30 $379.00
OHu79122	XM_011512740.3 Latest version!	Homo sapiens tripartite motif containing 42 (TRIM42), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	12-14	$391.30 $559.00
View Old Accession Versions >>
OHu79122	XM_011512740.2	Homo sapiens tripartite motif containing 42 (TRIM42), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	12-14	$391.30 $559.00
OHu15452	NM_152616.4	Homo sapiens tripartite motif containing 42 (TRIM42), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	in pcDNA3.1-C-(k)DYK	$189.50-$265.30 $379.00
Hide Old Accession Versions >>

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***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

TRIM42 ( NM_152616.4 ) cDNA ORF clone, Homo sapiens(human) -> NP_689829.3 Homo sapiens tripartite motif containing 42 (TRIM42), mRNA.

Price & Availability↑

CloneID	OHu15452
Clone ID Related Accession (Same CDS sequence)	NM_152616.4 , NM_152616.5
Accession Version	NM_152616.4	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2172bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-11-27
Organism	Homo sapiens(human)
Product	tripartite motif-containing protein 42
Comment	Comment: REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from DC397052.1, AF521868.1, AC026324.11 and BX093220.1. On Jul 28, 2010 this sequence version replaced NM_152616.3. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: AK097416.1, BC130474.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1968968, SAMEA2148093 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end.

ATGGAAACTG CTATGTGCGT TTGCTGTCCA TGTTGTACAT GGCAGAGATG TTGTCCTCAG 
TTATGCTCCT GTCTGTGCTG CAAGTTCATC TTCACCTCAG AGCGGAACTG CACCTGCTTC 
CCCTGCCCTT ACAAAGATGA GCGGAACTGC CAGTTCTGCC ACTGCACCTG TTCTGAGAGC 
CCCAACTGCC ATTGGTGTTG CTGCTCTTGG GCCAATGATC CCAACTGTAA GTGCTGCTGC 
ACAGCCAGCA GCAATCTCAA CTGCTACTAC TATGAGAGCC GCTGCTGCCG CAATACCATC 
ATCACTTTCC ACAAGGGCCG CCTCAGGAGC ATCCATACCT CCTCCAAGAC TGCCCTGCGC 
ACTGGGAGCA GCGATACCCA GGTGGATGAA GTAAAGTCAA TACCAGCCAA CAGTCACCTG 
GTGAACCACC TCAATTGCCC CATGTGCAGC CGGCTGCGCC TGCACTCATT CATGCTGCCC 
TGCAACCACA GCCTGTGCGA GAAGTGCCTG CGGCAGCTGC AGAAGCACGC CGAGGTCACC 
GAGAACTTCT TCATCCTCAT CTGCCCAGTG TGCGACCGCT CGCACTGCAT GCCCTACAGC 
AACAAGATGC AGCTGCCCGA GAACTACCTG CACGGGCGTC TCACCAAGCG CTACATGCAG 
GAGCACGGCT ACCTCAAGTG GCGCTTTGAC CGCTCCTCCG GGCCCATCCT CTGCCAGGTC 
TGCCGCAACA AGCGCATCGC TTACAAGCGC TGCATCACCT GCCGCCTCAA CCTGTGCAAC 
GACTGCCTCA AGGCCTTCCA CTCGGATGTG GCCATGCAAG ACCACGTCTT TGTGGACACC 
AGCGCCGAGG AACAGGACGA GAAGATCTGC ATCCACCACC CATCCAGCCG CATCATCGAG 
TACTGCCGCA ATGACAACAA ATTGCTCTGC ACCTTCTGCA AGTTCTCTTT CCACAATGGC 
CACGACACCA TTAGCCTCAT CGACGCCTGC TCCGAGAGGG CCGCCTCACT CTTCAGCGCC 
ATCGCCAAGT TCAAAGCAGT CCGATATGAA ATTGATAATG ACCTAATGGA ATTCAACATC 
TTAAAAAACA GCTTTAAAGC TGACAAGGAG GCAAAGCGAA AAGAGATCAG AAATGGCTTT 
CTCAAGTTGC GCAGCATTCT TCAGGAGAAA GAGAAGATCA TCATGGAGCA GATAGAGAAT 
CTAGAAGTGT CCAGGCAGAA GGAAATTGAA AAATATGTGT ATGTTACAAC CATGAAAGTG 
AACGAGATGG ATGGTCTGAT CGCCTACTCC AAGGAAGCCC TGAAGGAGAC TGGCCAGGTG 
GCATTCCTGC AGTCAGCCAA GATCCTGGTG GACCAGATCG AGGACGGCAT CCAGACCACC 
TACAGGCCTG ACCCACAGCT CCGGCTGCAC TCAATAAACT ACGTGCCCTT GGACTTTGTT 
GAGCTTTCCA GTGCCATCCA TGAGCTCTTC CCCACAGGGC CCAAGAAGGT ACGCTCCTCA 
GGGGACTCCC TGCCCTCCCC CTACCCCGTG CACTCAGAAA CAATGATTGC CAGGAAGGTC 
ACTTTCAGCA CCCACAGCCT CGGCAACCAG CACATATACC AGCGAAGCTC CTCCATGTTG 
TCCTTCAGCA ACACTGACAA GAAGGCCAAG GTGGGTCTGG AGGCCTGTGG GAGAGCCCAG 
TCAGCCACCC CCGCCAAACC CACAGACGGC CTCTACACCT ACTGGAGTGC TGGAGCAGAC 
AGCCAGTCTG TACAGAACAG CAGCAGCTTC CACAACTGGT ACTCATTCAA CGATGGCTCT 
GTGAAGACCC CAGGCCCAAT TGTTATCTAC CAGACTCTGG TGTACCCAAG AGCTGCCAAG 
GTTTACTGGA CATGTCCAGC AGAAGACGTG GACTCTTTTG AGATGGAATT CTATGAAGTC 
ATTACTTCTC CTCCTAACAA CGTACAAATG GAGCTCTGTG GACAAATTCG GGACATAATG 
CAGCAAAATC TGGAGCTGCA CAACCTGACC CCCAACACAG AATACGTGTT TAAAGTTAGA 
GCCATCAATG ATAATGGTCC TGGGCAATGG AGTGATATCT GCAAGGTGGT AACACCAGAT 
GGACATGGGA AGAACCGAGC TAAGTGGGGC CTGCTGAAGA ATATCCAGTC TGCCCTCCAG 
AAGCACTTCT GA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_689829.3
CDS	207..2378
Translation	METAMCVCCPCCTWQRCCPQLCSCLCCKFIFTSERNCTCFPCPYKDERNCQFCHCTCSESPNCHWCCCSWANDPNCKCCCTASSNLNCYYYESRCCRNTIITFHKGRLRSIHTSSKTALRTGSSDTQVDEVKSIPANSHLVNHLNCPMCSRLRLHSFMLPCNHSLCEKCLRQLQKHAEVTENFFILICPVCDRSHCMPYSNKMQLPENYLHGRLTKRYMQEHGYLKWRFDRSSGPILCQVCRNKRIAYKRCITCRLNLCNDCLKAFHSDVAMQDHVFVDTSAEEQDEKICIHHPSSRIIEYCRNDNKLLCTFCKFSFHNGHDTISLIDACSERAASLFSAIAKFKAVRYEIDNDLMEFNILKNSFKADKEAKRKEIRNGFLKLRSILQEKEKIIMEQIENLEVSRQKEIEKYVYVTTMKVNEMDGLIAYSKEALKETGQVAFLQSAKILVDQIEDGIQTTYRPDPQLRLHSINYVPLDFVELSSAIHELFPTGPKKVRSSGDSLPSPYPVHSETMIARKVTFSTHSLGNQHIYQRSSSMLSFSNTDKKAKVGLEACGRAQSATPAKPTDGLYTYWSAGADSQSVQNSSSFHNWYSFNDGSVKTPGPIVIYQTLVYPRAAKVYWTCPAEDVDSFEMEFYEVITSPPNNVQMELCGQIRDIMQQNLELHNLTPNTEYVFKVRAINDNGPGQWSDICKVVTPDGHGKNRAKWGLLKNIQSALQKHF

Target ORF information:

RefSeq Version	NM_152616.4
Organism	Homo sapiens(human)
Definition	Homo sapiens tripartite motif containing 42 (TRIM42), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_152616.4

ORF Insert Sequence:

ATGGAAACTG CTATGTGCGT TTGCTGTCCA TGTTGTACAT GGCAGAGATG TTGTCCTCAG 
TTATGCTCCT GTCTGTGCTG CAAGTTCATC TTCACCTCAG AGCGGAACTG CACCTGCTTC 
CCCTGCCCTT ACAAAGATGA GCGGAACTGC CAGTTCTGCC ACTGCACCTG TTCTGAGAGC 
CCCAACTGCC ATTGGTGTTG CTGCTCTTGG GCCAATGATC CCAACTGTAA GTGCTGCTGC 
ACAGCCAGCA GCAATCTCAA CTGCTACTAC TATGAGAGCC GCTGCTGCCG CAATACCATC 
ATCACTTTCC ACAAGGGCCG CCTCAGGAGC ATCCATACCT CCTCCAAGAC TGCCCTGCGC 
ACTGGGAGCA GCGATACCCA GGTGGATGAA GTAAAGTCAA TACCAGCCAA CAGTCACCTG 
GTGAACCACC TCAATTGCCC CATGTGCAGC CGGCTGCGCC TGCACTCATT CATGCTGCCC 
TGCAACCACA GCCTGTGCGA GAAGTGCCTG CGGCAGCTGC AGAAGCACGC CGAGGTCACC 
GAGAACTTCT TCATCCTCAT CTGCCCAGTG TGCGACCGCT CGCACTGCAT GCCCTACAGC 
AACAAGATGC AGCTGCCCGA GAACTACCTG CACGGGCGTC TCACCAAGCG CTACATGCAG 
GAGCACGGCT ACCTCAAGTG GCGCTTTGAC CGCTCCTCCG GGCCCATCCT CTGCCAGGTC 
TGCCGCAACA AGCGCATCGC TTACAAGCGC TGCATCACCT GCCGCCTCAA CCTGTGCAAC 
GACTGCCTCA AGGCCTTCCA CTCGGATGTG GCCATGCAAG ACCACGTCTT TGTGGACACC 
AGCGCCGAGG AACAGGACGA GAAGATCTGC ATCCACCACC CATCCAGCCG CATCATCGAG 
TACTGCCGCA ATGACAACAA ATTGCTCTGC ACCTTCTGCA AGTTCTCTTT CCACAATGGC 
CACGACACCA TTAGCCTCAT CGACGCCTGC TCCGAGAGGG CCGCCTCACT CTTCAGCGCC 
ATCGCCAAGT TCAAAGCAGT CCGATATGAA ATTGATAATG ACCTAATGGA ATTCAACATC 
TTAAAAAACA GCTTTAAAGC TGACAAGGAG GCAAAGCGAA AAGAGATCAG AAATGGCTTT 
CTCAAGTTGC GCAGCATTCT TCAGGAGAAA GAGAAGATCA TCATGGAGCA GATAGAGAAT 
CTAGAAGTGT CCAGGCAGAA GGAAATTGAA AAATATGTGT ATGTTACAAC CATGAAAGTG 
AACGAGATGG ATGGTCTGAT CGCCTACTCC AAGGAAGCCC TGAAGGAGAC TGGCCAGGTG 
GCATTCCTGC AGTCAGCCAA GATCCTGGTG GACCAGATCG AGGACGGCAT CCAGACCACC 
TACAGGCCTG ACCCACAGCT CCGGCTGCAC TCAATAAACT ACGTGCCCTT GGACTTTGTT 
GAGCTTTCCA GTGCCATCCA TGAGCTCTTC CCCACAGGGC CCAAGAAGGT ACGCTCCTCA 
GGGGACTCCC TGCCCTCCCC CTACCCCGTG CACTCAGAAA CAATGATTGC CAGGAAGGTC 
ACTTTCAGCA CCCACAGCCT CGGCAACCAG CACATATACC AGCGAAGCTC CTCCATGTTG 
TCCTTCAGCA ACACTGACAA GAAGGCCAAG GTGGGTCTGG AGGCCTGTGG GAGAGCCCAG 
TCAGCCACCC CCGCCAAACC CACAGACGGC CTCTACACCT ACTGGAGTGC TGGAGCAGAC 
AGCCAGTCTG TACAGAACAG CAGCAGCTTC CACAACTGGT ACTCATTCAA CGATGGCTCT 
GTGAAGACCC CAGGCCCAAT TGTTATCTAC CAGACTCTGG TGTACCCAAG AGCTGCCAAG 
GTTTACTGGA CATGTCCAGC AGAAGACGTG GACTCTTTTG AGATGGAATT CTATGAAGTC 
ATTACTTCTC CTCCTAACAA CGTACAAATG GAGCTCTGTG GACAAATTCG GGACATAATG 
CAGCAAAATC TGGAGCTGCA CAACCTGACC CCCAACACAG AATACGTGTT TAAAGTTAGA 
GCCATCAATG ATAATGGTCC TGGGCAATGG AGTGATATCT GCAAGGTGGT AACACCAGAT 
GGACATGGGA AGAACCGAGC TAAGTGGGGC CTGCTGAAGA ATATCCAGTC TGCCCTCCAG 
AAGCACTTCT GA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

TRIM42 ( NM_152616.5 ) cDNA ORF clone, Homo sapiens(human) -> NP_689829.3 Homo sapiens tripartite motif containing 42 (TRIM42), mRNA.

Price & Availability↑

CloneID	OHu15452
Clone ID Related Accession (Same CDS sequence)	NM_152616.4 , NM_152616.5
Accession Version	NM_152616.5 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2172bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-05-01
Organism	Homo sapiens(human)
Product	tripartite motif-containing protein 42
Comment	Comment: REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from DC397052.1, AF521868.1, AC026324.11 and BX093220.1. On Nov 22, 2018 this sequence version replaced NM_152616.4. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: AK097416.1, SRR5189667.196682.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1968968, SAMEA2148093 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## MANE Ensembl match :: ENST00000286349.4/ ENSP00000286349.3 RefSeq Select criteria :: based on conservation, expression ##RefSeq-Attributes-END## COMPLETENESS: full length.

ATGGAAACTG CTATGTGCGT TTGCTGTCCA TGTTGTACAT GGCAGAGATG TTGTCCTCAG 
TTATGCTCCT GTCTGTGCTG CAAGTTCATC TTCACCTCAG AGCGGAACTG CACCTGCTTC 
CCCTGCCCTT ACAAAGATGA GCGGAACTGC CAGTTCTGCC ACTGCACCTG TTCTGAGAGC 
CCCAACTGCC ATTGGTGTTG CTGCTCTTGG GCCAATGATC CCAACTGTAA GTGCTGCTGC 
ACAGCCAGCA GCAATCTCAA CTGCTACTAC TATGAGAGCC GCTGCTGCCG CAATACCATC 
ATCACTTTCC ACAAGGGCCG CCTCAGGAGC ATCCATACCT CCTCCAAGAC TGCCCTGCGC 
ACTGGGAGCA GCGATACCCA GGTGGATGAA GTAAAGTCAA TACCAGCCAA CAGTCACCTG 
GTGAACCACC TCAATTGCCC CATGTGCAGC CGGCTGCGCC TGCACTCATT CATGCTGCCC 
TGCAACCACA GCCTGTGCGA GAAGTGCCTG CGGCAGCTGC AGAAGCACGC CGAGGTCACC 
GAGAACTTCT TCATCCTCAT CTGCCCAGTG TGCGACCGCT CGCACTGCAT GCCCTACAGC 
AACAAGATGC AGCTGCCCGA GAACTACCTG CACGGGCGTC TCACCAAGCG CTACATGCAG 
GAGCACGGCT ACCTCAAGTG GCGCTTTGAC CGCTCCTCCG GGCCCATCCT CTGCCAGGTC 
TGCCGCAACA AGCGCATCGC TTACAAGCGC TGCATCACCT GCCGCCTCAA CCTGTGCAAC 
GACTGCCTCA AGGCCTTCCA CTCGGATGTG GCCATGCAAG ACCACGTCTT TGTGGACACC 
AGCGCCGAGG AACAGGACGA GAAGATCTGC ATCCACCACC CATCCAGCCG CATCATCGAG 
TACTGCCGCA ATGACAACAA ATTGCTCTGC ACCTTCTGCA AGTTCTCTTT CCACAATGGC 
CACGACACCA TTAGCCTCAT CGACGCCTGC TCCGAGAGGG CCGCCTCACT CTTCAGCGCC 
ATCGCCAAGT TCAAAGCAGT CCGATATGAA ATTGATAATG ACCTAATGGA ATTCAACATC 
TTAAAAAACA GCTTTAAAGC TGACAAGGAG GCAAAGCGAA AAGAGATCAG AAATGGCTTT 
CTCAAGTTGC GCAGCATTCT TCAGGAGAAA GAGAAGATCA TCATGGAGCA GATAGAGAAT 
CTAGAAGTGT CCAGGCAGAA GGAAATTGAA AAATATGTGT ATGTTACAAC CATGAAAGTG 
AACGAGATGG ATGGTCTGAT CGCCTACTCC AAGGAAGCCC TGAAGGAGAC TGGCCAGGTG 
GCATTCCTGC AGTCAGCCAA GATCCTGGTG GACCAGATCG AGGACGGCAT CCAGACCACC 
TACAGGCCTG ACCCACAGCT CCGGCTGCAC TCAATAAACT ACGTGCCCTT GGACTTTGTT 
GAGCTTTCCA GTGCCATCCA TGAGCTCTTC CCCACAGGGC CCAAGAAGGT ACGCTCCTCA 
GGGGACTCCC TGCCCTCCCC CTACCCCGTG CACTCAGAAA CAATGATTGC CAGGAAGGTC 
ACTTTCAGCA CCCACAGCCT CGGCAACCAG CACATATACC AGCGAAGCTC CTCCATGTTG 
TCCTTCAGCA ACACTGACAA GAAGGCCAAG GTGGGTCTGG AGGCCTGTGG GAGAGCCCAG 
TCAGCCACCC CCGCCAAACC CACAGACGGC CTCTACACCT ACTGGAGTGC TGGAGCAGAC 
AGCCAGTCTG TACAGAACAG CAGCAGCTTC CACAACTGGT ACTCATTCAA CGATGGCTCT 
GTGAAGACCC CAGGCCCAAT TGTTATCTAC CAGACTCTGG TGTACCCAAG AGCTGCCAAG 
GTTTACTGGA CATGTCCAGC AGAAGACGTG GACTCTTTTG AGATGGAATT CTATGAAGTC 
ATTACTTCTC CTCCTAACAA CGTACAAATG GAGCTCTGTG GACAAATTCG GGACATAATG 
CAGCAAAATC TGGAGCTGCA CAACCTGACC CCCAACACAG AATACGTGTT TAAAGTTAGA 
GCCATCAATG ATAATGGTCC TGGGCAATGG AGTGATATCT GCAAGGTGGT AACACCAGAT 
GGACATGGGA AGAACCGAGC TAAGTGGGGC CTGCTGAAGA ATATCCAGTC TGCCCTCCAG 
AAGCACTTCT GA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_689829.3
CDS	167..2338
Translation	METAMCVCCPCCTWQRCCPQLCSCLCCKFIFTSERNCTCFPCPYKDERNCQFCHCTCSESPNCHWCCCSWANDPNCKCCCTASSNLNCYYYESRCCRNTIITFHKGRLRSIHTSSKTALRTGSSDTQVDEVKSIPANSHLVNHLNCPMCSRLRLHSFMLPCNHSLCEKCLRQLQKHAEVTENFFILICPVCDRSHCMPYSNKMQLPENYLHGRLTKRYMQEHGYLKWRFDRSSGPILCQVCRNKRIAYKRCITCRLNLCNDCLKAFHSDVAMQDHVFVDTSAEEQDEKICIHHPSSRIIEYCRNDNKLLCTFCKFSFHNGHDTISLIDACSERAASLFSAIAKFKAVRYEIDNDLMEFNILKNSFKADKEAKRKEIRNGFLKLRSILQEKEKIIMEQIENLEVSRQKEIEKYVYVTTMKVNEMDGLIAYSKEALKETGQVAFLQSAKILVDQIEDGIQTTYRPDPQLRLHSINYVPLDFVELSSAIHELFPTGPKKVRSSGDSLPSPYPVHSETMIARKVTFSTHSLGNQHIYQRSSSMLSFSNTDKKAKVGLEACGRAQSATPAKPTDGLYTYWSAGADSQSVQNSSSFHNWYSFNDGSVKTPGPIVIYQTLVYPRAAKVYWTCPAEDVDSFEMEFYEVITSPPNNVQMELCGQIRDIMQQNLELHNLTPNTEYVFKVRAINDNGPGQWSDICKVVTPDGHGKNRAKWGLLKNIQSALQKHF

Target ORF information:

RefSeq Version	NM_152616.5
Organism	Homo sapiens(human)
Definition	Homo sapiens tripartite motif containing 42 (TRIM42), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_152616.5

ORF Insert Sequence:

ATGGAAACTG CTATGTGCGT TTGCTGTCCA TGTTGTACAT GGCAGAGATG TTGTCCTCAG 
TTATGCTCCT GTCTGTGCTG CAAGTTCATC TTCACCTCAG AGCGGAACTG CACCTGCTTC 
CCCTGCCCTT ACAAAGATGA GCGGAACTGC CAGTTCTGCC ACTGCACCTG TTCTGAGAGC 
CCCAACTGCC ATTGGTGTTG CTGCTCTTGG GCCAATGATC CCAACTGTAA GTGCTGCTGC 
ACAGCCAGCA GCAATCTCAA CTGCTACTAC TATGAGAGCC GCTGCTGCCG CAATACCATC 
ATCACTTTCC ACAAGGGCCG CCTCAGGAGC ATCCATACCT CCTCCAAGAC TGCCCTGCGC 
ACTGGGAGCA GCGATACCCA GGTGGATGAA GTAAAGTCAA TACCAGCCAA CAGTCACCTG 
GTGAACCACC TCAATTGCCC CATGTGCAGC CGGCTGCGCC TGCACTCATT CATGCTGCCC 
TGCAACCACA GCCTGTGCGA GAAGTGCCTG CGGCAGCTGC AGAAGCACGC CGAGGTCACC 
GAGAACTTCT TCATCCTCAT CTGCCCAGTG TGCGACCGCT CGCACTGCAT GCCCTACAGC 
AACAAGATGC AGCTGCCCGA GAACTACCTG CACGGGCGTC TCACCAAGCG CTACATGCAG 
GAGCACGGCT ACCTCAAGTG GCGCTTTGAC CGCTCCTCCG GGCCCATCCT CTGCCAGGTC 
TGCCGCAACA AGCGCATCGC TTACAAGCGC TGCATCACCT GCCGCCTCAA CCTGTGCAAC 
GACTGCCTCA AGGCCTTCCA CTCGGATGTG GCCATGCAAG ACCACGTCTT TGTGGACACC 
AGCGCCGAGG AACAGGACGA GAAGATCTGC ATCCACCACC CATCCAGCCG CATCATCGAG 
TACTGCCGCA ATGACAACAA ATTGCTCTGC ACCTTCTGCA AGTTCTCTTT CCACAATGGC 
CACGACACCA TTAGCCTCAT CGACGCCTGC TCCGAGAGGG CCGCCTCACT CTTCAGCGCC 
ATCGCCAAGT TCAAAGCAGT CCGATATGAA ATTGATAATG ACCTAATGGA ATTCAACATC 
TTAAAAAACA GCTTTAAAGC TGACAAGGAG GCAAAGCGAA AAGAGATCAG AAATGGCTTT 
CTCAAGTTGC GCAGCATTCT TCAGGAGAAA GAGAAGATCA TCATGGAGCA GATAGAGAAT 
CTAGAAGTGT CCAGGCAGAA GGAAATTGAA AAATATGTGT ATGTTACAAC CATGAAAGTG 
AACGAGATGG ATGGTCTGAT CGCCTACTCC AAGGAAGCCC TGAAGGAGAC TGGCCAGGTG 
GCATTCCTGC AGTCAGCCAA GATCCTGGTG GACCAGATCG AGGACGGCAT CCAGACCACC 
TACAGGCCTG ACCCACAGCT CCGGCTGCAC TCAATAAACT ACGTGCCCTT GGACTTTGTT 
GAGCTTTCCA GTGCCATCCA TGAGCTCTTC CCCACAGGGC CCAAGAAGGT ACGCTCCTCA 
GGGGACTCCC TGCCCTCCCC CTACCCCGTG CACTCAGAAA CAATGATTGC CAGGAAGGTC 
ACTTTCAGCA CCCACAGCCT CGGCAACCAG CACATATACC AGCGAAGCTC CTCCATGTTG 
TCCTTCAGCA ACACTGACAA GAAGGCCAAG GTGGGTCTGG AGGCCTGTGG GAGAGCCCAG 
TCAGCCACCC CCGCCAAACC CACAGACGGC CTCTACACCT ACTGGAGTGC TGGAGCAGAC 
AGCCAGTCTG TACAGAACAG CAGCAGCTTC CACAACTGGT ACTCATTCAA CGATGGCTCT 
GTGAAGACCC CAGGCCCAAT TGTTATCTAC CAGACTCTGG TGTACCCAAG AGCTGCCAAG 
GTTTACTGGA CATGTCCAGC AGAAGACGTG GACTCTTTTG AGATGGAATT CTATGAAGTC 
ATTACTTCTC CTCCTAACAA CGTACAAATG GAGCTCTGTG GACAAATTCG GGACATAATG 
CAGCAAAATC TGGAGCTGCA CAACCTGACC CCCAACACAG AATACGTGTT TAAAGTTAGA 
GCCATCAATG ATAATGGTCC TGGGCAATGG AGTGATATCT GCAAGGTGGT AACACCAGAT 
GGACATGGGA AGAACCGAGC TAAGTGGGGC CTGCTGAAGA ATATCCAGTC TGCCCTCCAG 
AAGCACTTCT GA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

TRIM42 ( XM_011512740.3 ) cDNA ORF clone, Homo sapiens(human) -> XP_011511042.1 Homo sapiens tripartite motif containing 42 (TRIM42), transcript variant X1, mRNA.

Price & Availability↑

CloneID	OHu79122
Clone ID Related Accession (Same CDS sequence)	XM_011512740.3 , XM_011512740.2
Accession Version	XM_011512740.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2184bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-12-05
Organism	Homo sapiens(human)
Product	tripartite motif-containing protein 42 isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000003.12) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 26, 2018 this sequence version replaced XM_011512740.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Updated annotation Annotation Name :: Homo sapiens Updated Annotation Release 109.20191205 Annotation Version :: 109.20191205 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; propagated RefSeq model Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGAAACTG CTATGTGCGT TTGCTGTCCA TGTTGTACAT GGCAGAGATG TTGTCCTCAG 
TTATGCTCCT GTCTGTGCTG CAAGTTCATC TTCACCTCAG AGCGGAACTG CACCTGCTTC 
CCCTGCCCTT ACAAAGATGA GCGGAACTGC CAGTTCTGCC ACTGCACCTG TTCTGAGAGC 
CCCAACTGCC ATTGGTGTTG CTGCTCTTGG GCCAATGATC CCAACTGTAA GTGCTGCTGC 
ACAGCCAGCA GCAATCTCAA CTGCTACTAC TATGAGAGCC GCTGCTGCCG CAATACCATC 
ATCACTTTCC ACAAGGGCCG CCTCAGGAGC ATCCATACCT CCTCCAAGAC TGCCCTGCGC 
ACTGGGAGCA GCGATACCCA GGTGGATGAA GTAAAGTCAA TACCAGCCAA CAGTCACCTG 
GTGAACCACC TCAATTGCCC CATGTGCAGC CGGCTGCGCC TGCACTCATT CATGCTGCCC 
TGCAACCACA GCCTGTGCGA GAAGTGCCTG CGGCAGCTGC AGAAGCACGC CGAGGTCACC 
GAGAACTTCT TCATCCTCAT CTGCCCAGTG TGCGACCGCT CGCACTGCAT GCCCTACAGC 
AACAAGATGC AGCTGCCCGA GAACTACCTG CACGGGCGTC TCACCAAGCG CTACATGCAG 
GAGCACGGCT ACCTCAAGTG GCGCTTTGAC CGCTCCTCCG GGCCCATCCT CTGCCAGGTC 
TGCCGCAACA AGCGCATCGC TTACAAGCGC TGCATCACCT GCCGCCTCAA CCTGTGCAAC 
GACTGCCTCA AGGCCTTCCA CTCGGATGTG GCCATGCAAG ACCACGTCTT TGTGGACACC 
AGCGCCGAGG AACAGGACGA GAAGATCTGC ATCCACCACC CATCCAGCCG CATCATCGAG 
TACTGCCGCA ATGACAACAA ATTGCTCTGC ACCTTCTGCA AGTTCTCTTT CCACAATGGC 
CACGACACCA TTAGCCTCAT CGACGCCTGC TCCGAGAGGG CCGCCTCACT CTTCAGCGCC 
ATCGCCAAGT TCAAAGCAGT CCGATATGAA ATTGATAATG ACCTAATGGA ATTCAACATC 
TTAAAAAACA GCTTTAAAGC TGACAAGGAG GCAAAGCGAA AAGAGATCAG AAATGGCTTT 
CTCAAGTTGC GCAGCATTCT TCAGGAGAAA GAGAAGATCA TCATGGAGCA GATAGAGAAT 
CTAGAAGTGT CCAGGCAGAA GGAAATTGAA AAATATGTGT ATGTTACAAC CATGAAAGTG 
AACGAGATGG ATGGTCTGAT CGCCTACTCC AAGGAAGCCC TGAAGGAGAC TGGCCAGGTG 
GCATTCCTGC AGTCAGCCAA GATCCTGGTG GACCAGATCG AGGACGGCAT CCAGACCACC 
TACAGGCCTG ACCCACAGCT CCGGCTGCAC TCAATAAACT ACGTGCCCTT GGACTTTGTT 
GAGCTTTCCA GTGCCATCCA TGAGCTCTTC CCCACAGGGC CCAAGAAGGT ACGCTCCTCA 
GGGGACTCCC TGCCCTCCCC CTACCCCGTG CACTCAGAAA CAATGATTGC CAGGAAGGTC 
ACTTTCAGCA CCCACAGCCT CGGCAACCAG CACATATACC AGCGAAGCTC CTCCATGTTG 
TCCTTCAGCA ACACTGACAA GAAGGCCAAG GTGGGTCTGG AGGCCTGTGG GAGAGCCCAG 
TCAGCCACCC CCGCCAAACC CACAGACGGC CTCTACACCT ACTGGAGTGC TGGAGCAGAC 
AGCCAGTCTG TACAGAACAG CAGCAGCTTC CACAACTGGT ACTCATTCAA CGATGGCTCT 
GTGAAGACCC CAGGCCCAAT TGTTATCTAC CAGACTCTGG TGTACCCAAG AGCTGCCAAG 
GTTTACTGGA CATGTCCAGC AGAAGACGTG GACTCTTTTG AGATGGAATT CTATGAAGTC 
ATTACTTCTC CTCCTAACAA CGTACAAATG GAGCTCTGTG GACAAATTCG GGACATAATG 
CAGCAAAATC TGGAGCTGCA CAACCTGACC CCCAACACAG AATACGTGTT TAAAGTTAGA 
GCCATCAATG ATAATGGTCC TGGGCAATGG AGTGATATCT GCAAGTGTTG GGACCACAGA 
GATGAAAGAC TATCATTTCC CCCACACCCC AATCAAGGTG CTCATGGTCT GGTAAGAAAG 
TCAAATGCAT TAGCTGAAAC TTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_011511042.1
CDS	178..2361
Translation	METAMCVCCPCCTWQRCCPQLCSCLCCKFIFTSERNCTCFPCPYKDERNCQFCHCTCSESPNCHWCCCSWANDPNCKCCCTASSNLNCYYYESRCCRNTIITFHKGRLRSIHTSSKTALRTGSSDTQVDEVKSIPANSHLVNHLNCPMCSRLRLHSFMLPCNHSLCEKCLRQLQKHAEVTENFFILICPVCDRSHCMPYSNKMQLPENYLHGRLTKRYMQEHGYLKWRFDRSSGPILCQVCRNKRIAYKRCITCRLNLCNDCLKAFHSDVAMQDHVFVDTSAEEQDEKICIHHPSSRIIEYCRNDNKLLCTFCKFSFHNGHDTISLIDACSERAASLFSAIAKFKAVRYEIDNDLMEFNILKNSFKADKEAKRKEIRNGFLKLRSILQEKEKIIMEQIENLEVSRQKEIEKYVYVTTMKVNEMDGLIAYSKEALKETGQVAFLQSAKILVDQIEDGIQTTYRPDPQLRLHSINYVPLDFVELSSAIHELFPTGPKKVRSSGDSLPSPYPVHSETMIARKVTFSTHSLGNQHIYQRSSSMLSFSNTDKKAKVGLEACGRAQSATPAKPTDGLYTYWSAGADSQSVQNSSSFHNWYSFNDGSVKTPGPIVIYQTLVYPRAAKVYWTCPAEDVDSFEMEFYEVITSPPNNVQMELCGQIRDIMQQNLELHNLTPNTEYVFKVRAINDNGPGQWSDICKCWDHRDERLSFPPHPNQGAHGLVRKSNALAET

Target ORF information:

RefSeq Version	XM_011512740.3
Organism	Homo sapiens(human)
Definition	Homo sapiens tripartite motif containing 42 (TRIM42), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_011512740.3

ORF Insert Sequence:

ATGGAAACTG CTATGTGCGT TTGCTGTCCA TGTTGTACAT GGCAGAGATG TTGTCCTCAG 
TTATGCTCCT GTCTGTGCTG CAAGTTCATC TTCACCTCAG AGCGGAACTG CACCTGCTTC 
CCCTGCCCTT ACAAAGATGA GCGGAACTGC CAGTTCTGCC ACTGCACCTG TTCTGAGAGC 
CCCAACTGCC ATTGGTGTTG CTGCTCTTGG GCCAATGATC CCAACTGTAA GTGCTGCTGC 
ACAGCCAGCA GCAATCTCAA CTGCTACTAC TATGAGAGCC GCTGCTGCCG CAATACCATC 
ATCACTTTCC ACAAGGGCCG CCTCAGGAGC ATCCATACCT CCTCCAAGAC TGCCCTGCGC 
ACTGGGAGCA GCGATACCCA GGTGGATGAA GTAAAGTCAA TACCAGCCAA CAGTCACCTG 
GTGAACCACC TCAATTGCCC CATGTGCAGC CGGCTGCGCC TGCACTCATT CATGCTGCCC 
TGCAACCACA GCCTGTGCGA GAAGTGCCTG CGGCAGCTGC AGAAGCACGC CGAGGTCACC 
GAGAACTTCT TCATCCTCAT CTGCCCAGTG TGCGACCGCT CGCACTGCAT GCCCTACAGC 
AACAAGATGC AGCTGCCCGA GAACTACCTG CACGGGCGTC TCACCAAGCG CTACATGCAG 
GAGCACGGCT ACCTCAAGTG GCGCTTTGAC CGCTCCTCCG GGCCCATCCT CTGCCAGGTC 
TGCCGCAACA AGCGCATCGC TTACAAGCGC TGCATCACCT GCCGCCTCAA CCTGTGCAAC 
GACTGCCTCA AGGCCTTCCA CTCGGATGTG GCCATGCAAG ACCACGTCTT TGTGGACACC 
AGCGCCGAGG AACAGGACGA GAAGATCTGC ATCCACCACC CATCCAGCCG CATCATCGAG 
TACTGCCGCA ATGACAACAA ATTGCTCTGC ACCTTCTGCA AGTTCTCTTT CCACAATGGC 
CACGACACCA TTAGCCTCAT CGACGCCTGC TCCGAGAGGG CCGCCTCACT CTTCAGCGCC 
ATCGCCAAGT TCAAAGCAGT CCGATATGAA ATTGATAATG ACCTAATGGA ATTCAACATC 
TTAAAAAACA GCTTTAAAGC TGACAAGGAG GCAAAGCGAA AAGAGATCAG AAATGGCTTT 
CTCAAGTTGC GCAGCATTCT TCAGGAGAAA GAGAAGATCA TCATGGAGCA GATAGAGAAT 
CTAGAAGTGT CCAGGCAGAA GGAAATTGAA AAATATGTGT ATGTTACAAC CATGAAAGTG 
AACGAGATGG ATGGTCTGAT CGCCTACTCC AAGGAAGCCC TGAAGGAGAC TGGCCAGGTG 
GCATTCCTGC AGTCAGCCAA GATCCTGGTG GACCAGATCG AGGACGGCAT CCAGACCACC 
TACAGGCCTG ACCCACAGCT CCGGCTGCAC TCAATAAACT ACGTGCCCTT GGACTTTGTT 
GAGCTTTCCA GTGCCATCCA TGAGCTCTTC CCCACAGGGC CCAAGAAGGT ACGCTCCTCA 
GGGGACTCCC TGCCCTCCCC CTACCCCGTG CACTCAGAAA CAATGATTGC CAGGAAGGTC 
ACTTTCAGCA CCCACAGCCT CGGCAACCAG CACATATACC AGCGAAGCTC CTCCATGTTG 
TCCTTCAGCA ACACTGACAA GAAGGCCAAG GTGGGTCTGG AGGCCTGTGG GAGAGCCCAG 
TCAGCCACCC CCGCCAAACC CACAGACGGC CTCTACACCT ACTGGAGTGC TGGAGCAGAC 
AGCCAGTCTG TACAGAACAG CAGCAGCTTC CACAACTGGT ACTCATTCAA CGATGGCTCT 
GTGAAGACCC CAGGCCCAAT TGTTATCTAC CAGACTCTGG TGTACCCAAG AGCTGCCAAG 
GTTTACTGGA CATGTCCAGC AGAAGACGTG GACTCTTTTG AGATGGAATT CTATGAAGTC 
ATTACTTCTC CTCCTAACAA CGTACAAATG GAGCTCTGTG GACAAATTCG GGACATAATG 
CAGCAAAATC TGGAGCTGCA CAACCTGACC CCCAACACAG AATACGTGTT TAAAGTTAGA 
GCCATCAATG ATAATGGTCC TGGGCAATGG AGTGATATCT GCAAGTGTTG GGACCACAGA 
GATGAAAGAC TATCATTTCC CCCACACCCC AATCAAGGTG CTCATGGTCT GGTAAGAAAG 
TCAAATGCAT TAGCTGAAAC TTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

TRIM42 ( XM_011512740.2 ) cDNA ORF clone, Homo sapiens(human) -> XP_011511042.1 Homo sapiens tripartite motif containing 42 (TRIM42), transcript variant X1, mRNA.

Price & Availability↑

CloneID	OHu79122
Clone ID Related Accession (Same CDS sequence)	XM_011512740.3 , XM_011512740.2
Accession Version	XM_011512740.2	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2184bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-06-05
Organism	Homo sapiens(human)
Product	tripartite motif-containing protein 42 isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000003.12) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 6, 2016 this sequence version replaced XM_011512740.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Homo sapiens Annotation Release 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGAAACTG CTATGTGCGT TTGCTGTCCA TGTTGTACAT GGCAGAGATG TTGTCCTCAG 
TTATGCTCCT GTCTGTGCTG CAAGTTCATC TTCACCTCAG AGCGGAACTG CACCTGCTTC 
CCCTGCCCTT ACAAAGATGA GCGGAACTGC CAGTTCTGCC ACTGCACCTG TTCTGAGAGC 
CCCAACTGCC ATTGGTGTTG CTGCTCTTGG GCCAATGATC CCAACTGTAA GTGCTGCTGC 
ACAGCCAGCA GCAATCTCAA CTGCTACTAC TATGAGAGCC GCTGCTGCCG CAATACCATC 
ATCACTTTCC ACAAGGGCCG CCTCAGGAGC ATCCATACCT CCTCCAAGAC TGCCCTGCGC 
ACTGGGAGCA GCGATACCCA GGTGGATGAA GTAAAGTCAA TACCAGCCAA CAGTCACCTG 
GTGAACCACC TCAATTGCCC CATGTGCAGC CGGCTGCGCC TGCACTCATT CATGCTGCCC 
TGCAACCACA GCCTGTGCGA GAAGTGCCTG CGGCAGCTGC AGAAGCACGC CGAGGTCACC 
GAGAACTTCT TCATCCTCAT CTGCCCAGTG TGCGACCGCT CGCACTGCAT GCCCTACAGC 
AACAAGATGC AGCTGCCCGA GAACTACCTG CACGGGCGTC TCACCAAGCG CTACATGCAG 
GAGCACGGCT ACCTCAAGTG GCGCTTTGAC CGCTCCTCCG GGCCCATCCT CTGCCAGGTC 
TGCCGCAACA AGCGCATCGC TTACAAGCGC TGCATCACCT GCCGCCTCAA CCTGTGCAAC 
GACTGCCTCA AGGCCTTCCA CTCGGATGTG GCCATGCAAG ACCACGTCTT TGTGGACACC 
AGCGCCGAGG AACAGGACGA GAAGATCTGC ATCCACCACC CATCCAGCCG CATCATCGAG 
TACTGCCGCA ATGACAACAA ATTGCTCTGC ACCTTCTGCA AGTTCTCTTT CCACAATGGC 
CACGACACCA TTAGCCTCAT CGACGCCTGC TCCGAGAGGG CCGCCTCACT CTTCAGCGCC 
ATCGCCAAGT TCAAAGCAGT CCGATATGAA ATTGATAATG ACCTAATGGA ATTCAACATC 
TTAAAAAACA GCTTTAAAGC TGACAAGGAG GCAAAGCGAA AAGAGATCAG AAATGGCTTT 
CTCAAGTTGC GCAGCATTCT TCAGGAGAAA GAGAAGATCA TCATGGAGCA GATAGAGAAT 
CTAGAAGTGT CCAGGCAGAA GGAAATTGAA AAATATGTGT ATGTTACAAC CATGAAAGTG 
AACGAGATGG ATGGTCTGAT CGCCTACTCC AAGGAAGCCC TGAAGGAGAC TGGCCAGGTG 
GCATTCCTGC AGTCAGCCAA GATCCTGGTG GACCAGATCG AGGACGGCAT CCAGACCACC 
TACAGGCCTG ACCCACAGCT CCGGCTGCAC TCAATAAACT ACGTGCCCTT GGACTTTGTT 
GAGCTTTCCA GTGCCATCCA TGAGCTCTTC CCCACAGGGC CCAAGAAGGT ACGCTCCTCA 
GGGGACTCCC TGCCCTCCCC CTACCCCGTG CACTCAGAAA CAATGATTGC CAGGAAGGTC 
ACTTTCAGCA CCCACAGCCT CGGCAACCAG CACATATACC AGCGAAGCTC CTCCATGTTG 
TCCTTCAGCA ACACTGACAA GAAGGCCAAG GTGGGTCTGG AGGCCTGTGG GAGAGCCCAG 
TCAGCCACCC CCGCCAAACC CACAGACGGC CTCTACACCT ACTGGAGTGC TGGAGCAGAC 
AGCCAGTCTG TACAGAACAG CAGCAGCTTC CACAACTGGT ACTCATTCAA CGATGGCTCT 
GTGAAGACCC CAGGCCCAAT TGTTATCTAC CAGACTCTGG TGTACCCAAG AGCTGCCAAG 
GTTTACTGGA CATGTCCAGC AGAAGACGTG GACTCTTTTG AGATGGAATT CTATGAAGTC 
ATTACTTCTC CTCCTAACAA CGTACAAATG GAGCTCTGTG GACAAATTCG GGACATAATG 
CAGCAAAATC TGGAGCTGCA CAACCTGACC CCCAACACAG AATACGTGTT TAAAGTTAGA 
GCCATCAATG ATAATGGTCC TGGGCAATGG AGTGATATCT GCAAGTGTTG GGACCACAGA 
GATGAAAGAC TATCATTTCC CCCACACCCC AATCAAGGTG CTCATGGTCT GGTAAGAAAG 
TCAAATGCAT TAGCTGAAAC TTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_011511042.1
CDS	202..2385
Translation	METAMCVCCPCCTWQRCCPQLCSCLCCKFIFTSERNCTCFPCPYKDERNCQFCHCTCSESPNCHWCCCSWANDPNCKCCCTASSNLNCYYYESRCCRNTIITFHKGRLRSIHTSSKTALRTGSSDTQVDEVKSIPANSHLVNHLNCPMCSRLRLHSFMLPCNHSLCEKCLRQLQKHAEVTENFFILICPVCDRSHCMPYSNKMQLPENYLHGRLTKRYMQEHGYLKWRFDRSSGPILCQVCRNKRIAYKRCITCRLNLCNDCLKAFHSDVAMQDHVFVDTSAEEQDEKICIHHPSSRIIEYCRNDNKLLCTFCKFSFHNGHDTISLIDACSERAASLFSAIAKFKAVRYEIDNDLMEFNILKNSFKADKEAKRKEIRNGFLKLRSILQEKEKIIMEQIENLEVSRQKEIEKYVYVTTMKVNEMDGLIAYSKEALKETGQVAFLQSAKILVDQIEDGIQTTYRPDPQLRLHSINYVPLDFVELSSAIHELFPTGPKKVRSSGDSLPSPYPVHSETMIARKVTFSTHSLGNQHIYQRSSSMLSFSNTDKKAKVGLEACGRAQSATPAKPTDGLYTYWSAGADSQSVQNSSSFHNWYSFNDGSVKTPGPIVIYQTLVYPRAAKVYWTCPAEDVDSFEMEFYEVITSPPNNVQMELCGQIRDIMQQNLELHNLTPNTEYVFKVRAINDNGPGQWSDICKCWDHRDERLSFPPHPNQGAHGLVRKSNALAET

Target ORF information:

RefSeq Version	XM_011512740.2
Organism	Homo sapiens(human)
Definition	Homo sapiens tripartite motif containing 42 (TRIM42), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_011512740.2

ORF Insert Sequence:

ATGGAAACTG CTATGTGCGT TTGCTGTCCA TGTTGTACAT GGCAGAGATG TTGTCCTCAG 
TTATGCTCCT GTCTGTGCTG CAAGTTCATC TTCACCTCAG AGCGGAACTG CACCTGCTTC 
CCCTGCCCTT ACAAAGATGA GCGGAACTGC CAGTTCTGCC ACTGCACCTG TTCTGAGAGC 
CCCAACTGCC ATTGGTGTTG CTGCTCTTGG GCCAATGATC CCAACTGTAA GTGCTGCTGC 
ACAGCCAGCA GCAATCTCAA CTGCTACTAC TATGAGAGCC GCTGCTGCCG CAATACCATC 
ATCACTTTCC ACAAGGGCCG CCTCAGGAGC ATCCATACCT CCTCCAAGAC TGCCCTGCGC 
ACTGGGAGCA GCGATACCCA GGTGGATGAA GTAAAGTCAA TACCAGCCAA CAGTCACCTG 
GTGAACCACC TCAATTGCCC CATGTGCAGC CGGCTGCGCC TGCACTCATT CATGCTGCCC 
TGCAACCACA GCCTGTGCGA GAAGTGCCTG CGGCAGCTGC AGAAGCACGC CGAGGTCACC 
GAGAACTTCT TCATCCTCAT CTGCCCAGTG TGCGACCGCT CGCACTGCAT GCCCTACAGC 
AACAAGATGC AGCTGCCCGA GAACTACCTG CACGGGCGTC TCACCAAGCG CTACATGCAG 
GAGCACGGCT ACCTCAAGTG GCGCTTTGAC CGCTCCTCCG GGCCCATCCT CTGCCAGGTC 
TGCCGCAACA AGCGCATCGC TTACAAGCGC TGCATCACCT GCCGCCTCAA CCTGTGCAAC 
GACTGCCTCA AGGCCTTCCA CTCGGATGTG GCCATGCAAG ACCACGTCTT TGTGGACACC 
AGCGCCGAGG AACAGGACGA GAAGATCTGC ATCCACCACC CATCCAGCCG CATCATCGAG 
TACTGCCGCA ATGACAACAA ATTGCTCTGC ACCTTCTGCA AGTTCTCTTT CCACAATGGC 
CACGACACCA TTAGCCTCAT CGACGCCTGC TCCGAGAGGG CCGCCTCACT CTTCAGCGCC 
ATCGCCAAGT TCAAAGCAGT CCGATATGAA ATTGATAATG ACCTAATGGA ATTCAACATC 
TTAAAAAACA GCTTTAAAGC TGACAAGGAG GCAAAGCGAA AAGAGATCAG AAATGGCTTT 
CTCAAGTTGC GCAGCATTCT TCAGGAGAAA GAGAAGATCA TCATGGAGCA GATAGAGAAT 
CTAGAAGTGT CCAGGCAGAA GGAAATTGAA AAATATGTGT ATGTTACAAC CATGAAAGTG 
AACGAGATGG ATGGTCTGAT CGCCTACTCC AAGGAAGCCC TGAAGGAGAC TGGCCAGGTG 
GCATTCCTGC AGTCAGCCAA GATCCTGGTG GACCAGATCG AGGACGGCAT CCAGACCACC 
TACAGGCCTG ACCCACAGCT CCGGCTGCAC TCAATAAACT ACGTGCCCTT GGACTTTGTT 
GAGCTTTCCA GTGCCATCCA TGAGCTCTTC CCCACAGGGC CCAAGAAGGT ACGCTCCTCA 
GGGGACTCCC TGCCCTCCCC CTACCCCGTG CACTCAGAAA CAATGATTGC CAGGAAGGTC 
ACTTTCAGCA CCCACAGCCT CGGCAACCAG CACATATACC AGCGAAGCTC CTCCATGTTG 
TCCTTCAGCA ACACTGACAA GAAGGCCAAG GTGGGTCTGG AGGCCTGTGG GAGAGCCCAG 
TCAGCCACCC CCGCCAAACC CACAGACGGC CTCTACACCT ACTGGAGTGC TGGAGCAGAC 
AGCCAGTCTG TACAGAACAG CAGCAGCTTC CACAACTGGT ACTCATTCAA CGATGGCTCT 
GTGAAGACCC CAGGCCCAAT TGTTATCTAC CAGACTCTGG TGTACCCAAG AGCTGCCAAG 
GTTTACTGGA CATGTCCAGC AGAAGACGTG GACTCTTTTG AGATGGAATT CTATGAAGTC 
ATTACTTCTC CTCCTAACAA CGTACAAATG GAGCTCTGTG GACAAATTCG GGACATAATG 
CAGCAAAATC TGGAGCTGCA CAACCTGACC CCCAACACAG AATACGTGTT TAAAGTTAGA 
GCCATCAATG ATAATGGTCC TGGGCAATGG AGTGATATCT GCAAGTGTTG GGACCACAGA 
GATGAAAGAC TATCATTTCC CCCACACCCC AATCAAGGTG CTCATGGTCT GGTAAGAAAG 
TCAAATGCAT TAGCTGAAAC TTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Widespread Expansion of Protein Interaction Capabilities by Alternative Splicing.
Cell164(4)805-17(2016 Feb)
Yang X,Coulombe-Huntington J,Kang S,Sheynkman GM,Hao T,Richardson A,Sun S,Yang F,Shen YA,Murray RR,Spirohn K,Begg BE,Duran-Frigola M,MacWilliams A,Pevzner SJ,Zhong Q,Trigg SA,Tam S,Ghamsari L,Sahni N,Yi S,Rodriguez MD,Balcha D,Tan G,Costanzo M,Andrews B,Boone C,Zhou XJ,Salehi-Ashtiani K,Charloteaux B,Chen AA,Calderwood MA,Aloy P,Roth FP,Hill DE,Iakoucheva LM,Xia Y,Vidal M

Widespread macromolecular interaction perturbations in human genetic disorders.
Cell161(3)647-660(2015 Apr)
Sahni N,Yi S,Taipale M,Fuxman Bass JI,Coulombe-Huntington J,Yang F,Peng J,Weile J,Karras GI,Wang Y,Kov?cs IA,Kamburov A,Krykbaeva I,Lam MH,Tucker G,Khurana V,Sharma A,Liu YY,Yachie N,Zhong Q,Shen Y,Palagi A,San-Miguel A,Fan C,Balcha D,Dricot A,Jordan DM,Walsh JM,Shah AA,Yang X,Stoyanova AK,Leighton A,Calderwood MA,Jacob Y,Cusick ME,Salehi-Ashtiani K,Whitesell LJ,Sunyaev S,Berger B,Barab?si AL,Charloteaux B,Hill DE,Hao T,Roth FP,Xia Y,Walhout AJM,Lindquist S,Vidal M

Genome-wide association study for refractive astigmatism reveals genetic co-determination with spherical equivalent refractive error: the CREAM consortium.
Human genetics134(2)131-46(2015 Feb)
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The tripartite motif family identifies cell compartments.
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TRIM42 cDNA ORF clone, Homo sapiens(human)

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Clones

gRNAs

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Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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