Gene Symbol | C4orf54 |
Entrez Gene ID | 285556 |
Full Name | uncharacterized LOC285556 |
Synonyms | FOPV |
Gene Type | protein-coding |
Organism | Homo sapiens(human) |
Genome |
ORF » Species Summary » Homo sapiens » C4orf54 cDNA ORF clone
Gene Symbol | C4orf54 |
Entrez Gene ID | 285556 |
Full Name | uncharacterized LOC285556 |
Synonyms | FOPV |
Gene Type | protein-coding |
Organism | Homo sapiens(human) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_003960343.5 | XP_003960392.3 | uncharacterized protein LOC285556 isoform X1 |
XM_373030.11 | XP_373030.5 | uncharacterized protein C4orf54 isoform X1 |
XM_006726413.3 | XP_006726476.1 | uncharacterized protein LOC285556 isoform X2 |
XM_006714430.3 | XP_006714493.1 | uncharacterized protein C4orf54 isoform X2 |
XM_373030.10 | XP_373030.5 | uncharacterized protein LOC285556 isoform X1 |
NM_001354435.1 | NP_001341364.1 | uncharacterized protein C4orf54 |
Pan troglodytes (chimpanzee) | LOC461397 | XP_001148831.1 |
LOC711218 | XP_001099986.1 | |
Mus musculus (house mouse) | LOC102634333 | XP_006502619.1 |
Xenopus tropicalis (tropical clawed frog) | LOC101731618 | XP_004911157.1 |
Canis lupus familiaris (dog) | LOC102151348 | XP_005639388.1 |
Bos taurus (cattle) | LOC101904203 | XP_005207761.1 |
Rattus norvegicus (Norway rat) | LOC102555814 | XP_006233454.1 |
Homo sapiens (human) | LOC285556 | XP_373030.5 |
Danio rerio (zebrafish) | LOC101884490 | XP_005172278.1 |
Mutations in the novel gene FOPV are associated with familial autosomal dominant and non-familial obliterative portal venopathy.
Besmond C, Valla D, Hubert L, Poirier K, Grosse B, Guettier C, Bernard O, Gonzales E, Jacquemin E
Liver international : official journal of the International Association for the Study of the Liver(2017 Aug)
Genomewide pharmacogenomic study of metabolic side effects to antipsychotic drugs.
Adkins DE, Aberg K, McClay JL, Buksz?r J, Zhao Z, Jia P, Stroup TS, Perkins D, McEvoy JP, Lieberman JA, Sullivan PF, van den Oord EJ
Molecular psychiatry16(3)321-32(2011 Mar)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following C4orf54 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the C4orf54 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OHu39251 | |
Clone ID Related Accession (Same CDS sequence) | XM_006714430.3 , NM_001354435.1 | |
Accession Version | NM_001354435.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 5382bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-05-03 | |
Organism | Homo sapiens(human) | |
Product | uncharacterized protein C4orf54 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC083902.5. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: AL833279.1, AL832378.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1968968, SAMEA2142363 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## RefSeq Select criteria :: based on conservation, expression ##RefSeq-Attributes-END## |
1 | ATGCTTTCCT TTCATTTCTG GAAGTCCCGG GGTCAACCTA CAGATGCTGC TTCTTCCGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001341364.1 |
CDS | 32..5413 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001354435.1 |
1 | ATGCTTTCCT TTCATTTCTG GAAGTCCCGG GGTCAACCTA CAGATGCTGC TTCTTCCGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu39250 | |
Clone ID Related Accession (Same CDS sequence) | XM_373030.11 , XM_373030.10 | |
Accession Version | XM_373030.11 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 5481bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-05 | |
Organism | Homo sapiens(human) | |
Product | uncharacterized protein C4orf54 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000004.12) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 26, 2018 this sequence version replaced XM_373030.10. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Updated annotation Annotation Name :: Homo sapiens Updated Annotation Release 109.20191205 Annotation Version :: 109.20191205 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; propagated RefSeq model Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGGCATG CCAGTGGGTC ACATTTCCTC TCTGAATCTC CCTCCAAGCC GCACTGTACT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_373030.5 |
CDS | 342..5822 |
Translation |
Target ORF information:
Target ORF information:
|
XM_373030.11 |
1 | ATGGGGCATG CCAGTGGGTC ACATTTCCTC TCTGAATCTC CCTCCAAGCC GCACTGTACT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu39250 | |
Clone ID Related Accession (Same CDS sequence) | XM_373030.11 , XM_373030.10 | |
Accession Version | XM_373030.10 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 5481bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-05 | |
Organism | Homo sapiens(human) | |
Product | uncharacterized protein LOC285556 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000004.12) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 6, 2016 this sequence version replaced XM_373030.9. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Homo sapiens Annotation Release 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGGCATG CCAGTGGGTC ACATTTCCTC TCTGAATCTC CCTCCAAGCC GCACTGTACT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_373030.5 |
CDS | 343..5823 |
Translation |
Target ORF information:
Target ORF information:
|
XM_373030.10 |
1 | ATGGGGCATG CCAGTGGGTC ACATTTCCTC TCTGAATCTC CCTCCAAGCC GCACTGTACT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu39251 | |
Clone ID Related Accession (Same CDS sequence) | XM_006714430.3 , NM_001354435.1 | |
Accession Version | XM_006714430.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 5382bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-05 | |
Organism | Homo sapiens(human) | |
Product | uncharacterized protein C4orf54 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000004.12) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 6, 2016 this sequence version replaced XM_006714430.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Updated annotation Annotation Name :: Homo sapiens Updated Annotation Release 109.20191205 Annotation Version :: 109.20191205 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; propagated RefSeq model Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCTTTCCT TTCATTTCTG GAAGTCCCGG GGTCAACCTA CAGATGCTGC TTCTTCCGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006714493.1 |
CDS | 344..5725 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006714430.3 |
1 | ATGCTTTCCT TTCATTTCTG GAAGTCCCGG GGTCAACCTA CAGATGCTGC TTCTTCCGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu55182 | |
Clone ID Related Accession (Same CDS sequence) | XM_003960343.5 | |
Accession Version | XM_003960343.5 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 5481bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-05 | |
Organism | Homo sapiens(human) | |
Product | uncharacterized protein LOC285556 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_018915.2) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 6, 2016 this sequence version replaced XM_003960343.4. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Homo sapiens Annotation Release 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGGCATG CCAGTGGGTC ACATTTCCTC TCTGAATCTC CCTCCAAGCC GCACTGTACT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_003960392.3 |
CDS | 343..5823 |
Translation |
Target ORF information:
Target ORF information:
|
XM_003960343.5 |
1 | ATGGGGCATG CCAGTGGGTC ACATTTCCTC TCTGAATCTC CCTCCAAGCC GCACTGTACT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu55183 | |
Clone ID Related Accession (Same CDS sequence) | XM_006726413.3 | |
Accession Version | XM_006726413.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 5382bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-05 | |
Organism | Homo sapiens(human) | |
Product | uncharacterized protein LOC285556 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_018915.2) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 6, 2016 this sequence version replaced XM_006726413.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Homo sapiens Annotation Release 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCTTTCCT TTCATTTCTG GAAGTCCCGG GGTCAACCTA CAGATGCTGC TTCTTCCGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006726476.1 |
CDS | 344..5725 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006726413.3 |
1 | ATGCTTTCCT TTCATTTCTG GAAGTCCCGG GGTCAACCTA CAGATGCTGC TTCTTCCGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Mutations in the novel gene FOPV are associated with familial autosomal dominant and non-familial obliterative portal venopathy. |
Genomewide pharmacogenomic study of metabolic side effects to antipsychotic drugs. |