COL6A1 cDNA ORF clone, Gallus gallus(chicken)

Gene
Clones
gRNAs

Summary

Gene Symbol	COL6A1
Entrez Gene ID	396000
Full Name	collagen type VI alpha 1 chain
General protein information	Preferred Names collagen type VI alpha 1 chain Names collagen alpha-1(VI) chain alpha-1 type VI collagen collagen, type VI, alpha 1
Gene Type	protein-coding
Organism	Gallus gallus(chicken)

mRNA and Protein(s)

mRNA	Protein	Name
NM_205107.1	NP_990438.1	collagen alpha-1(VI) chain precursor
XM_015289126.1	XP_015144612.1	collagen alpha-1(VI) chain isoform X1

Pathways from BioSystems

Homologies

Rattus norvegicus (Norway rat)	Col6a1	XP_215375.5
Xenopus tropicalis (tropical clawed frog)	col6a1	XP_002932077.2
Canis lupus familiaris (dog)	COL6A1	XP_003434049.2
Mus musculus (house mouse)	Col6a1	NP_034063.1
Gallus gallus (chicken)	COL6A1	NP_990438.1
Danio rerio (zebrafish)	col6a1	XP_698253.3
Homo sapiens (human)	COL6A1	NP_001839.2
Pan troglodytes (chimpanzee)	COL6A1	XP_001158445.1
	LOC721855	XP_001118050.2
Bos taurus (cattle)	COL6A1	NP_001137337.1

Gene Ontology
Bibliography

Related articles in PubMed

Characterization of the chicken alpha 1(VI) collagen promoter.
Koller E, Trueb B
European journal of biochemistry208(3)769-74(1992 Sep)

Structural comparison of the chicken genes for alpha 1(VI) and alpha 2(VI) collagen.
W?lchli C, Koller E, Trueb J, Trueb B
European journal of biochemistry205(2)583-9(1992 Apr)

Alpha 1 chain of chick type VI collagen. The complete cDNA sequence reveals a hybrid molecule made of one short collagen and three von Willebrand factor type A-like domains.
Bonaldo P, Russo V, Bucciotti F, Bressan GM, Colombatti A
The Journal of biological chemistry264(10)5575-80(1989 Apr)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following COL6A1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the COL6A1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OGa38144	XM_015289126.1 Latest version!	Gallus gallus collagen, type VI, alpha 1 (COL6A1), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	19-21	$629.30 $899.00
OGa26945	NM_205107.1 Latest version!	Gallus gallus collagen type VI alpha 1 chain (COL6A1), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	20	$629.30 $899.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

COL6A1 ( XM_015289126.1 ) cDNA ORF clone, Gallus gallus(chicken) -> XP_015144612.1 Gallus gallus collagen, type VI, alpha 1 (COL6A1), transcript variant X1, mRNA.

Price & Availability↑

CloneID	OGa38144
Clone ID Related Accession (Same CDS sequence)	XM_015289126.1
Accession Version	XM_015289126.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3456bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-01-03
Organism	Gallus gallus(chicken)
Product	collagen alpha-1(VI) chain isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NT_455901.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Gallus gallus Annotation Release 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGCAGCAGG CTGCCTTCCT CCAATCCCCG TTGGGCTCAG CTCAGGGCTC CGAGCCCCCA 
GGGCGCAGCT GGGGGACAGC AGAGTCCTTC GGCAGGAGCG CGCGGGTACA AGGAGCACAG 
AAAGACAGCG AGGAGAAGCG CAGGCTGGCT TCTGAGTCAG CACGGACAGC CCTGGTCCCA 
CCCTCCATCC CGGCTGCGGA GTCTCCTCCT CGCCCTCTCC CCCGCGCCCG CTCTTCCTTC 
CCCGGGTCCC AAGCGCTGAA ACCACCCCCA GACCCGGACA CGGCCTCTCC CTCCTTCCTC 
CCTTCGCTGC AGCTCGATGT GAATCTGAGC CCAGCGACAT GGGGCTGCAC GACTCCTTCT 
TGGCGCTGCT GCTTCTTCTG GGGGGTGCCT GGGCTCAGCA GGCTGAAATC AACGCCCGTG 
TCCTCAGGGC TCAGGCTGTG CCGGGGGCCT AGTGGAAAGC GGTGCTGTGC CACACTGCTC 
TGCTTGCCCT CAGACTGCCC CGTGGACCTG TTCTTTGTGC TGGACACCTC TGAAAGTGTC 
GCCCTGAGGG TGAAGCCCTT CGGGGACCTC GTGGCGCAAG TTAAAGACTT CACCAACCGC 
TTCATCGATA AGTTGACCGA AAGGTACTTC CGCTGTGACC GCTTCCTGGC ATGGAACGCT 
GGGGCTCTGC ACTACAGCGA CTCTGTCGTC ATCATCAAGG ACCTCACTGC CATGCCCAGC 
GGCAGGGCTG AGCTGAAGAA CAGCGTGTCA GCCATCAACT ACATTGGGAA AGGCACCCAC 
ACTGACTGCG CCATCAAGCA GGGCATCGAG CGGCTGCTCT TGGGTGGCTC CCATCTCAAG 
GAGAATAAAT ACCTGATCGT GGTGACTGAT GGACACCCTT TGGAGGGGTA CAAGGAGCCC 
TGCGGAGGCC TGGATGATGC TGCTAATGAA GCCAAACATT TGGGGATCAA AGTGTTCTCT 
GTCGCCATCT CACCCCACCA CCTGGACCAA CGTCTCAACA TCATTGCCAC AGACCATGCC 
TACCGCCGCA ACTTCACTGC CACAAGCCTG AAGCCAACCC GGGATCTTGA TGTGGAGGAG 
ACCATCAACA ACATCATTGA GATGATTAAA GACAACATGG AGCAATCGTG CTGCTCCTTT 
GAGTGCCATC CTCCCCGAGG ACCCCCAGGA CCTCCTGGTG ACCCAGGCCA CGAGGGAGAA 
AGAGGAAAGC CAGGTCTTCC TGGTCAGAAG GGAGATGCTG GAGACCCTGG CAGGCCAGGG 
GACATGGGGC CCGTTGGCTA CCAAGGAATG AAGGGCGACA AAGGAAGTCG AGGAGAAAAG 
GGCTCGAGAG GAGCCAAAGG AGCCAAGGGT GAGAAGGGCA AGCGTGGGAT TGACGGCATT 
GATGGCATGA AGGGAGAAGC TGGATACCCT GGGCTACCTG GCTGCAAAGG CTCACCTGGA 
TTTGATGGAA CTCAGGGCCC ACCTGGACCA AAGGGCGATC CTGGTGCTTA TGGACCCAAG 
GGAGGAAAGG GGGAGCCTGG GGAAGATGGA AAACCTGGCC GGCAGGGCAT TCCTGGTAGC 
CCTGGAGAGA AGGGTGCTCC TGGCAACAGG GGAGAGCCTG GACCCTTAGG GGAGACAGGG 
GATGAGGGCT CCCCAGGCGC AGATGGTCCT CCAGGAGAGC GGGGCAGCAA TGGAGAAAGA 
GGACCCCCAG GCTCGCCAGG TGACCGTGGG CCACGAGGAG ATCTGGGAGA GCCTGGACCA 
CCTGGTGACC AGGGGCGGGA AGGACCTCTT GGACCACCTG GAGACCAGGG TGAGCCTGGG 
CCCCCAGGAC CAAAGGGCTA CAGAGGAGAT GATGGCCCCC GTGGCAATGA GGGCCCCAAG 
GGATCGCCTG GAGCACCTGG GTTGCCTGGA GATCCTGGCC TAATGGGAGA AAGGGGCGAG 
GATGGTCCTC CTGGTAATGG CACAATTGGA TTCCCGGGTG CCCCTGGGCA GCAAGGAGAC 
AGAGGGGACC CTGGCATTAA TGGAACAAAA GGATATGTTG GTCCTAAAGG TGATGAAGGA 
GAAGCTGGAG ACCCTGGCAA TGATAACCCA ACCGCTGGTC CCAGTGGGAT CAAAGGAGCA 
AAGGGCCACA GGGGTCCTGA AGGCCGCCCG GGACCACCTG GACCTGTGGG GCCTCCAGGA 
CCAGATGAGT GTGAAATCTT GGACATCATC ATGAAGATGT GCTCATGCTG TGAGTGCACC 
TGTGGTCCTG TCGACCTCCT CTTCGTGTTG GACAGCTCAG AGAGTATTGG CCTGCAGAAC 
TTCCAGATTG CCAAGGATTT CATCATCAAA GTCATTGACC GCCTAAGCAA AGACGAGCGT 
GTGAAGTTTG AGCCTGGGGA GTCCCGAGTG GGCGTTGTGC AGTACAGCCA CAACAACACG 
CAGGAGCTGG TGGCTATGGG AGATGCCAAC ATAGACAACA TTGGGGCACT CAAACAGGCG 
GTCAAGAATC TGAAATGGAT TGCTGGGGGC ACCCACACAG GAGAAGCCCT GCAGTTCAGC 
AAGGAAAACC TGCTGCGGAG GTTCACCTCC AACAATAACG TGGCCATCGT CATCACAGAT 
GGACGCTCTG ACACGCTGCG GGACCGTACC CCACTGACTT CTCTGTGTGA GGTCACCCCG 
GTGGTTTCCC TTGGAATAGG CGACATTTTC CGGAACAACC CAAACCCAGA TCAACTGAAT 
GACATCGCTT GTTTAGGCAT GCCAAGGAGA CAAGGACTGT CCATTCAGAG AGACAACTAT 
GCCGAGCTCC TAGATGACTC CTTCTTGCAG AACATCACCT CGTACGTGTG CCGAGAGAAG 
AAATGTCCGG ACTATACCTG CCCAATCACT TTTGCCAATC CGGCAGACAT CATGCTGTTG 
GTGGACAGCT CCACCAGCGT GGGCAGCAAG AACTTTGACA CCACCAAGAA CTTTGTGAAG 
CGGCTTGCAG AGCGGTTCCT TGAGGCCAGC AAGCCAGCCG AAGATTCTGT GCGCGTCTCG 
GTGGTCCAGT ACAGCGGCAG AAACCAGCAG AAGGTCGAAG TCCCATTTCA GCGCAACTAC 
ACGGTCATCG CCAAAGCTGT TGACAACATG GAGTTCATGA ACGAAGCTAC AGATGTCAAT 
GCCGCTCTGC AGTACATCAT GGGGCTGTAC CAGCGGTCCT CTCGTGCTGG GGCGAAGAAG 
AAGGTGCTGG TGTTTTCTGA TGGCAACTCA CAGGGGATCA CTGCAAGGGC CATCGAGAGG 
ACTGTGCAGG AAGTTCAGCA GGCTGGTATT GAGGTCTACG TGCTGGCAGT GGGCAGCCAA 
GTCAACGAGC CCAATGTCCG CGTCCTGGTA ACAGGGAAGA GCACAAACTA TGACGTTGCC 
TATGGGGAGC GTCACCTGTT CCGTGTGCCT GACTATACCT CCCTGCTGCG TGGCGTCTTC 
TACCAAACTG TCTCCAGGAA GATAGCTGTT GACTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_015144612.1
CDS	16..3471
Translation	MQQAAFLQSPLGSAQGSEPPGRSWGTAESFGRSARVQGAQKDSEEKRRLASESARTALVPPSIPAAESPPRPLPRARSSFPGSQALKPPPDPDTASPSFLPSLQLDVNLSPATWGCTTPSWRCCFFWGVPGLSRLKSTPVSSGLRLCRGPSGKRCCATLLCLPSDCPVDLFFVLDTSESVALRVKPFGDLVAQVKDFTNRFIDKLTERYFRCDRFLAWNAGALHYSDSVVIIKDLTAMPSGRAELKNSVSAINYIGKGTHTDCAIKQGIERLLLGGSHLKENKYLIVVTDGHPLEGYKEPCGGLDDAANEAKHLGIKVFSVAISPHHLDQRLNIIATDHAYRRNFTATSLKPTRDLDVEETINNIIEMIKDNMEQSCCSFECHPPRGPPGPPGDPGHEGERGKPGLPGQKGDAGDPGRPGDMGPVGYQGMKGDKGSRGEKGSRGAKGAKGEKGKRGIDGIDGMKGEAGYPGLPGCKGSPGFDGTQGPPGPKGDPGAYGPKGGKGEPGEDGKPGRQGIPGSPGEKGAPGNRGEPGPLGETGDEGSPGADGPPGERGSNGERGPPGSPGDRGPRGDLGEPGPPGDQGREGPLGPPGDQGEPGPPGPKGYRGDDGPRGNEGPKGSPGAPGLPGDPGLMGERGEDGPPGNGTIGFPGAPGQQGDRGDPGINGTKGYVGPKGDEGEAGDPGNDNPTAGPSGIKGAKGHRGPEGRPGPPGPVGPPGPDECEILDIIMKMCSCCECTCGPVDLLFVLDSSESIGLQNFQIAKDFIIKVIDRLSKDERVKFEPGESRVGVVQYSHNNTQELVAMGDANIDNIGALKQAVKNLKWIAGGTHTGEALQFSKENLLRRFTSNNNVAIVITDGRSDTLRDRTPLTSLCEVTPVVSLGIGDIFRNNPNPDQLNDIACLGMPRRQGLSIQRDNYAELLDDSFLQNITSYVCREKKCPDYTCPITFANPADIMLLVDSSTSVGSKNFDTTKNFVKRLAERFLEASKPAEDSVRVSVVQYSGRNQQKVEVPFQRNYTVIAKAVDNMEFMNEATDVNAALQYIMGLYQRSSRAGAKKKVLVFSDGNSQGITARAIERTVQEVQQAGIEVYVLAVGSQVNEPNVRVLVTGKSTNYDVAYGERHLFRVPDYTSLLRGVFYQTVSRKIAVD

Target ORF information:

RefSeq Version	XM_015289126.1
Organism	Gallus gallus(chicken)
Definition	Gallus gallus collagen, type VI, alpha 1 (COL6A1), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_015289126.1

ORF Insert Sequence:

ATGCAGCAGG CTGCCTTCCT CCAATCCCCG TTGGGCTCAG CTCAGGGCTC CGAGCCCCCA 
GGGCGCAGCT GGGGGACAGC AGAGTCCTTC GGCAGGAGCG CGCGGGTACA AGGAGCACAG 
AAAGACAGCG AGGAGAAGCG CAGGCTGGCT TCTGAGTCAG CACGGACAGC CCTGGTCCCA 
CCCTCCATCC CGGCTGCGGA GTCTCCTCCT CGCCCTCTCC CCCGCGCCCG CTCTTCCTTC 
CCCGGGTCCC AAGCGCTGAA ACCACCCCCA GACCCGGACA CGGCCTCTCC CTCCTTCCTC 
CCTTCGCTGC AGCTCGATGT GAATCTGAGC CCAGCGACAT GGGGCTGCAC GACTCCTTCT 
TGGCGCTGCT GCTTCTTCTG GGGGGTGCCT GGGCTCAGCA GGCTGAAATC AACGCCCGTG 
TCCTCAGGGC TCAGGCTGTG CCGGGGGCCT AGTGGAAAGC GGTGCTGTGC CACACTGCTC 
TGCTTGCCCT CAGACTGCCC CGTGGACCTG TTCTTTGTGC TGGACACCTC TGAAAGTGTC 
GCCCTGAGGG TGAAGCCCTT CGGGGACCTC GTGGCGCAAG TTAAAGACTT CACCAACCGC 
TTCATCGATA AGTTGACCGA AAGGTACTTC CGCTGTGACC GCTTCCTGGC ATGGAACGCT 
GGGGCTCTGC ACTACAGCGA CTCTGTCGTC ATCATCAAGG ACCTCACTGC CATGCCCAGC 
GGCAGGGCTG AGCTGAAGAA CAGCGTGTCA GCCATCAACT ACATTGGGAA AGGCACCCAC 
ACTGACTGCG CCATCAAGCA GGGCATCGAG CGGCTGCTCT TGGGTGGCTC CCATCTCAAG 
GAGAATAAAT ACCTGATCGT GGTGACTGAT GGACACCCTT TGGAGGGGTA CAAGGAGCCC 
TGCGGAGGCC TGGATGATGC TGCTAATGAA GCCAAACATT TGGGGATCAA AGTGTTCTCT 
GTCGCCATCT CACCCCACCA CCTGGACCAA CGTCTCAACA TCATTGCCAC AGACCATGCC 
TACCGCCGCA ACTTCACTGC CACAAGCCTG AAGCCAACCC GGGATCTTGA TGTGGAGGAG 
ACCATCAACA ACATCATTGA GATGATTAAA GACAACATGG AGCAATCGTG CTGCTCCTTT 
GAGTGCCATC CTCCCCGAGG ACCCCCAGGA CCTCCTGGTG ACCCAGGCCA CGAGGGAGAA 
AGAGGAAAGC CAGGTCTTCC TGGTCAGAAG GGAGATGCTG GAGACCCTGG CAGGCCAGGG 
GACATGGGGC CCGTTGGCTA CCAAGGAATG AAGGGCGACA AAGGAAGTCG AGGAGAAAAG 
GGCTCGAGAG GAGCCAAAGG AGCCAAGGGT GAGAAGGGCA AGCGTGGGAT TGACGGCATT 
GATGGCATGA AGGGAGAAGC TGGATACCCT GGGCTACCTG GCTGCAAAGG CTCACCTGGA 
TTTGATGGAA CTCAGGGCCC ACCTGGACCA AAGGGCGATC CTGGTGCTTA TGGACCCAAG 
GGAGGAAAGG GGGAGCCTGG GGAAGATGGA AAACCTGGCC GGCAGGGCAT TCCTGGTAGC 
CCTGGAGAGA AGGGTGCTCC TGGCAACAGG GGAGAGCCTG GACCCTTAGG GGAGACAGGG 
GATGAGGGCT CCCCAGGCGC AGATGGTCCT CCAGGAGAGC GGGGCAGCAA TGGAGAAAGA 
GGACCCCCAG GCTCGCCAGG TGACCGTGGG CCACGAGGAG ATCTGGGAGA GCCTGGACCA 
CCTGGTGACC AGGGGCGGGA AGGACCTCTT GGACCACCTG GAGACCAGGG TGAGCCTGGG 
CCCCCAGGAC CAAAGGGCTA CAGAGGAGAT GATGGCCCCC GTGGCAATGA GGGCCCCAAG 
GGATCGCCTG GAGCACCTGG GTTGCCTGGA GATCCTGGCC TAATGGGAGA AAGGGGCGAG 
GATGGTCCTC CTGGTAATGG CACAATTGGA TTCCCGGGTG CCCCTGGGCA GCAAGGAGAC 
AGAGGGGACC CTGGCATTAA TGGAACAAAA GGATATGTTG GTCCTAAAGG TGATGAAGGA 
GAAGCTGGAG ACCCTGGCAA TGATAACCCA ACCGCTGGTC CCAGTGGGAT CAAAGGAGCA 
AAGGGCCACA GGGGTCCTGA AGGCCGCCCG GGACCACCTG GACCTGTGGG GCCTCCAGGA 
CCAGATGAGT GTGAAATCTT GGACATCATC ATGAAGATGT GCTCATGCTG TGAGTGCACC 
TGTGGTCCTG TCGACCTCCT CTTCGTGTTG GACAGCTCAG AGAGTATTGG CCTGCAGAAC 
TTCCAGATTG CCAAGGATTT CATCATCAAA GTCATTGACC GCCTAAGCAA AGACGAGCGT 
GTGAAGTTTG AGCCTGGGGA GTCCCGAGTG GGCGTTGTGC AGTACAGCCA CAACAACACG 
CAGGAGCTGG TGGCTATGGG AGATGCCAAC ATAGACAACA TTGGGGCACT CAAACAGGCG 
GTCAAGAATC TGAAATGGAT TGCTGGGGGC ACCCACACAG GAGAAGCCCT GCAGTTCAGC 
AAGGAAAACC TGCTGCGGAG GTTCACCTCC AACAATAACG TGGCCATCGT CATCACAGAT 
GGACGCTCTG ACACGCTGCG GGACCGTACC CCACTGACTT CTCTGTGTGA GGTCACCCCG 
GTGGTTTCCC TTGGAATAGG CGACATTTTC CGGAACAACC CAAACCCAGA TCAACTGAAT 
GACATCGCTT GTTTAGGCAT GCCAAGGAGA CAAGGACTGT CCATTCAGAG AGACAACTAT 
GCCGAGCTCC TAGATGACTC CTTCTTGCAG AACATCACCT CGTACGTGTG CCGAGAGAAG 
AAATGTCCGG ACTATACCTG CCCAATCACT TTTGCCAATC CGGCAGACAT CATGCTGTTG 
GTGGACAGCT CCACCAGCGT GGGCAGCAAG AACTTTGACA CCACCAAGAA CTTTGTGAAG 
CGGCTTGCAG AGCGGTTCCT TGAGGCCAGC AAGCCAGCCG AAGATTCTGT GCGCGTCTCG 
GTGGTCCAGT ACAGCGGCAG AAACCAGCAG AAGGTCGAAG TCCCATTTCA GCGCAACTAC 
ACGGTCATCG CCAAAGCTGT TGACAACATG GAGTTCATGA ACGAAGCTAC AGATGTCAAT 
GCCGCTCTGC AGTACATCAT GGGGCTGTAC CAGCGGTCCT CTCGTGCTGG GGCGAAGAAG 
AAGGTGCTGG TGTTTTCTGA TGGCAACTCA CAGGGGATCA CTGCAAGGGC CATCGAGAGG 
ACTGTGCAGG AAGTTCAGCA GGCTGGTATT GAGGTCTACG TGCTGGCAGT GGGCAGCCAA 
GTCAACGAGC CCAATGTCCG CGTCCTGGTA ACAGGGAAGA GCACAAACTA TGACGTTGCC 
TATGGGGAGC GTCACCTGTT CCGTGTGCCT GACTATACCT CCCTGCTGCG TGGCGTCTTC 
TACCAAACTG TCTCCAGGAA GATAGCTGTT GACTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

COL6A1 ( NM_205107.1 ) cDNA ORF clone, Gallus gallus(chicken) -> NP_990438.1 Gallus gallus collagen type VI alpha 1 chain (COL6A1), mRNA.

Price & Availability↑

CloneID	OGa26945
Clone ID Related Accession (Same CDS sequence)	NM_205107.1
Accession Version	NM_205107.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3060bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-12-25
Organism	Gallus gallus(chicken)
Product	collagen alpha-1(VI) chain precursor
Comment	Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from J04598.1. On Aug 30, 2004 this sequence version replaced XM_421890.1. ##Evidence-Data-START## Transcript exon combination :: J04598.1 [ECO:0000332] ##Evidence-Data-END##

ATGGGGCTGC ACGACTCCTT CTTGGCGCTG CTGCTTCTTC TGGGGGGTGC CTGGGCTCAG 
CAGGCTGAAA TCAACGCCCG TGTCCTCAGG GCTCAGGACT GCCCCGTGGA CCTGTTCTTT 
GTGCTGGACA CCTCTGAAAG TGTCGCCCTG AGGGTGAAGC CCTTCGGGGA CCTCGTGGCG 
CAAGTTAAAG ACTTCACCAA CCGCTTCATC GATAAGTTGA CCGAAAGGTA CTTCCGCTGT 
GACCGCTTCC TGGCATGGAA CGCTGGGGCT CTGCACTACA GCGACTCTGT CGTCATCATC 
AAGGACCTCA CTGCCATGCC CAGCGGCAGG GCTGAGCTGA AGAACAGCGT GTCAGCCATC 
AACTACATTG GGAAAGGCAC CCACACTGAC TGCGCCATCA AGCAGGGCAT CGAGCGGCTG 
CTCTTGGGTG GCTCCCATCT CAAGGAGAAT AAATACCTGA TCGTGGTGAC TGATGGACAC 
CCTTTGGAGG GGTACAAGGA GCCCTGCGGA GGCCTGGATG ATGCTGCTAA TGAAGCCAAA 
CATTTGGGGA TCAAAGTGTT CTCTGTCGCC ATCTCACCCC ACCACCTGGA CCAACGTCTC 
AACATCATTG CCACAGACCA TGCCTACCGC CGCAACTTCA CTGCCACAAG CCTGAAGCCA 
ACCCGGGATC TTGATGTGGA GGAGACCATC AACAACATCA TTGAGATGAT TAAAGACAAC 
ATGGAGCAAT CGTGCTGCTC CTTTGAGTGC CATCCTCCCC GAGGACCCCC AGGACCTCCT 
GGTGACCCAG GCCACGAGGG AGAAAGAGGA AAGCCAGGTC TTCCTGGTCA GAAGGGAGAT 
GCTGGAGACC CTGGCAGGCC AGGGGACATG GGGCCCGTTG GCTACCAAGG AATGAAGGGC 
GACAAAGGAA GTCGAGGAGA AAAGGGCTCG AGAGGAGCCA AAGGAGCCAA GGGTGAGAAG 
GGCAAGCGTG GGATTGACGG CATTGATGGC ATGAAGGGAG AAGCTGGATA CCCTGGGCTA 
CCTGGCTGCA AAGGCTCACC TGGATTTGAT GGAACTCAGG GCCCACCTGG ACCAAAGGGC 
GATCCTGGTG CTTATGGACC CAAGGGAGGA AAGGGGGAGC CTGGGGAAGA TGGAAAACCT 
GGCCGGCAGG GCATTCCTGG TAGCCCTGGA GAGAAGGGTG CTCCTGGCAA CAGGGGAGAG 
CCTGGACCCT TAGGGGAGAC AGGGGATGAG GGCTCCCCAG GCGCAGATGG TCCTCCAGGA 
GAGCGGGGCA GCAATGGAGA AAGAGGACCC CCAGGCTCGC CAGGTGACCG TGGGCCACGA 
GGAGATCTGG GAGAGCCTGG ACCACCTGGT GACCAGGGGC GGGAAGGACC TCTTGGACCA 
CCTGGAGACC AGGGTGAGCC TGGGCCCCCA GGACCAAAGG GCTACAGAGG AGATGATGGC 
CCCCGTGGCA ATGAGGGCCC CAAGGGATCG CCTGGAGCAC CTGGGTTGCC TGGAGATCCT 
GGCCTAATGG GAGAAAGGGG CGAGGATGGT CCTCCTGGTA ATGGCACAAT TGGATTCCCG 
GGTGCCCCTG GGCAGCAAGG AGACAGAGGG GACCCTGGCA TTAATGGAAC AAAAGGATAT 
GTTGGTCCTA AAGGTGATGA AGGAGAAGCT GGAGACCCTG GCAATGATAA CCCAACCGCT 
GGTCCCAGTG GGATCAAAGG AGCAAAGGGC CACAGGGGTC CTGAAGGCCG CCCGGGACCA 
CCTGGACCTG TGGGGCCTCC AGGACCAGAT GAGTGTGAAA TCTTGGACAT CATCATGAAG 
ATGTGCTCAT GCTGTGAGTG CACCTGTGGT CCTGTCGACC TCCTCTTCGT GTTGGACAGC 
TCAGAGAGTA TTGGCCTGCA GAACTTCCAG ATTGCCAAGG ATTTCATCAT CAAAGTCATT 
GACCGCCTAA GCAAAGACGA GCGTGTGAAG TTTGAGCCTG GGGAGTCCCG AGTGGGCGTT 
GTGCAGTACA GCCACAACAA CACGCAGGAG CTGGTGGCTA TGGGAGATGC CAACATAGAC 
AACATTGGGG CACTCAAACA GGCGGTCAAG AATCTGAAAT GGATTGCTGG GGGCACCCAC 
ACAGGAGAAG CCCTGCAGTT CAGCAAGGAA AACCTGCTGC GGAGGTTCAC CTCCAACAAT 
AACGTGGCCA TCGTCATCAC AGATGGACGC TCTGACACGC TGCGGGACCG TACCCCACTG 
ACTTCTCTGT GTGAGGTCAC CCCGGTGGTT TCCCTTGGAA TAGGCGACAT TTTCCGGAAC 
AACCCAAACC CAGATCAACT GAATGACATC GCTTGTTTAG GCATGCCAAG GAGACAAGGA 
CTGTCCATTC AGAGAGACAA CTATGCCGAG CTCCTAGATG ACTCCTTCTT GCAGAACATC 
ACCTCGTACG TGTGCCGAGA GAAGAAATGT CCGGACTATA CCTGCCCAAT CACTTTTGCC 
AATCCGGCAG ACATCATGCT GTTGGTGGAC AGCTCCACCA GCGTGGGCAG CAAGAACTTT 
GACACCACCA AGAACTTTGT GAAGCGGCTT GCAGAGCGGT TCCTTGAGGC CAGCAAGCCA 
GCCGAAGATT CTGTGCGCGT CTCGGTGGTC CAGTACAGCG GCAGAAACCA GCAGAAGGTC 
GAAGTCCCAT TTCAGCGCAA CTACACGGTC ATCGCCAAAG CTGTTGACAA CATGGAGTTC 
ATGAACGAAG CTACAGATGT CAATGCCGCT CTGCAGTACA TCATGGGGCT GTACCAGCGG 
TCCTCTCGTT CTGGGGCGAA GAAGAAGGTG CTGGTGTTTT CTGATGGCAA CTCACAGGGG 
ATCACTGCAA GGGCCATCGA GAGGACTGTG CAGGAAGTTC AGCAGGCTGG TATTGAGGTC 
TACGTGCTGG CAGTGGGCAG CCAAGTCAAC GAGCCCAATG TCCGCGTCCT GGTAACAGGG 
AAGAGCACAA ACTATGACGT TGCCTATGGG GAGCGTCACC TGTTCCGTGT GCCTGACTAT 
ACCTCCCTGC TGCGTGGCGT CTTCTACCAA ACTGTCTCCA GGAAGATAGC TGTTGACTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_990438.1
CDS	106..3165
Translation	MGLHDSFLALLLLLGGAWAQQAEINARVLRAQDCPVDLFFVLDTSESVALRVKPFGDLVAQVKDFTNRFIDKLTERYFRCDRFLAWNAGALHYSDSVVIIKDLTAMPSGRAELKNSVSAINYIGKGTHTDCAIKQGIERLLLGGSHLKENKYLIVVTDGHPLEGYKEPCGGLDDAANEAKHLGIKVFSVAISPHHLDQRLNIIATDHAYRRNFTATSLKPTRDLDVEETINNIIEMIKDNMEQSCCSFECHPPRGPPGPPGDPGHEGERGKPGLPGQKGDAGDPGRPGDMGPVGYQGMKGDKGSRGEKGSRGAKGAKGEKGKRGIDGIDGMKGEAGYPGLPGCKGSPGFDGTQGPPGPKGDPGAYGPKGGKGEPGEDGKPGRQGIPGSPGEKGAPGNRGEPGPLGETGDEGSPGADGPPGERGSNGERGPPGSPGDRGPRGDLGEPGPPGDQGREGPLGPPGDQGEPGPPGPKGYRGDDGPRGNEGPKGSPGAPGLPGDPGLMGERGEDGPPGNGTIGFPGAPGQQGDRGDPGINGTKGYVGPKGDEGEAGDPGNDNPTAGPSGIKGAKGHRGPEGRPGPPGPVGPPGPDECEILDIIMKMCSCCECTCGPVDLLFVLDSSESIGLQNFQIAKDFIIKVIDRLSKDERVKFEPGESRVGVVQYSHNNTQELVAMGDANIDNIGALKQAVKNLKWIAGGTHTGEALQFSKENLLRRFTSNNNVAIVITDGRSDTLRDRTPLTSLCEVTPVVSLGIGDIFRNNPNPDQLNDIACLGMPRRQGLSIQRDNYAELLDDSFLQNITSYVCREKKCPDYTCPITFANPADIMLLVDSSTSVGSKNFDTTKNFVKRLAERFLEASKPAEDSVRVSVVQYSGRNQQKVEVPFQRNYTVIAKAVDNMEFMNEATDVNAALQYIMGLYQRSSRSGAKKKVLVFSDGNSQGITARAIERTVQEVQQAGIEVYVLAVGSQVNEPNVRVLVTGKSTNYDVAYGERHLFRVPDYTSLLRGVFYQTVSRKIAVD

Target ORF information:

RefSeq Version	NM_205107.1
Organism	Gallus gallus(chicken)
Definition	Gallus gallus collagen type VI alpha 1 chain (COL6A1), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_205107.1

ORF Insert Sequence:

ATGGGGCTGC ACGACTCCTT CTTGGCGCTG CTGCTTCTTC TGGGGGGTGC CTGGGCTCAG 
CAGGCTGAAA TCAACGCCCG TGTCCTCAGG GCTCAGGACT GCCCCGTGGA CCTGTTCTTT 
GTGCTGGACA CCTCTGAAAG TGTCGCCCTG AGGGTGAAGC CCTTCGGGGA CCTCGTGGCG 
CAAGTTAAAG ACTTCACCAA CCGCTTCATC GATAAGTTGA CCGAAAGGTA CTTCCGCTGT 
GACCGCTTCC TGGCATGGAA CGCTGGGGCT CTGCACTACA GCGACTCTGT CGTCATCATC 
AAGGACCTCA CTGCCATGCC CAGCGGCAGG GCTGAGCTGA AGAACAGCGT GTCAGCCATC 
AACTACATTG GGAAAGGCAC CCACACTGAC TGCGCCATCA AGCAGGGCAT CGAGCGGCTG 
CTCTTGGGTG GCTCCCATCT CAAGGAGAAT AAATACCTGA TCGTGGTGAC TGATGGACAC 
CCTTTGGAGG GGTACAAGGA GCCCTGCGGA GGCCTGGATG ATGCTGCTAA TGAAGCCAAA 
CATTTGGGGA TCAAAGTGTT CTCTGTCGCC ATCTCACCCC ACCACCTGGA CCAACGTCTC 
AACATCATTG CCACAGACCA TGCCTACCGC CGCAACTTCA CTGCCACAAG CCTGAAGCCA 
ACCCGGGATC TTGATGTGGA GGAGACCATC AACAACATCA TTGAGATGAT TAAAGACAAC 
ATGGAGCAAT CGTGCTGCTC CTTTGAGTGC CATCCTCCCC GAGGACCCCC AGGACCTCCT 
GGTGACCCAG GCCACGAGGG AGAAAGAGGA AAGCCAGGTC TTCCTGGTCA GAAGGGAGAT 
GCTGGAGACC CTGGCAGGCC AGGGGACATG GGGCCCGTTG GCTACCAAGG AATGAAGGGC 
GACAAAGGAA GTCGAGGAGA AAAGGGCTCG AGAGGAGCCA AAGGAGCCAA GGGTGAGAAG 
GGCAAGCGTG GGATTGACGG CATTGATGGC ATGAAGGGAG AAGCTGGATA CCCTGGGCTA 
CCTGGCTGCA AAGGCTCACC TGGATTTGAT GGAACTCAGG GCCCACCTGG ACCAAAGGGC 
GATCCTGGTG CTTATGGACC CAAGGGAGGA AAGGGGGAGC CTGGGGAAGA TGGAAAACCT 
GGCCGGCAGG GCATTCCTGG TAGCCCTGGA GAGAAGGGTG CTCCTGGCAA CAGGGGAGAG 
CCTGGACCCT TAGGGGAGAC AGGGGATGAG GGCTCCCCAG GCGCAGATGG TCCTCCAGGA 
GAGCGGGGCA GCAATGGAGA AAGAGGACCC CCAGGCTCGC CAGGTGACCG TGGGCCACGA 
GGAGATCTGG GAGAGCCTGG ACCACCTGGT GACCAGGGGC GGGAAGGACC TCTTGGACCA 
CCTGGAGACC AGGGTGAGCC TGGGCCCCCA GGACCAAAGG GCTACAGAGG AGATGATGGC 
CCCCGTGGCA ATGAGGGCCC CAAGGGATCG CCTGGAGCAC CTGGGTTGCC TGGAGATCCT 
GGCCTAATGG GAGAAAGGGG CGAGGATGGT CCTCCTGGTA ATGGCACAAT TGGATTCCCG 
GGTGCCCCTG GGCAGCAAGG AGACAGAGGG GACCCTGGCA TTAATGGAAC AAAAGGATAT 
GTTGGTCCTA AAGGTGATGA AGGAGAAGCT GGAGACCCTG GCAATGATAA CCCAACCGCT 
GGTCCCAGTG GGATCAAAGG AGCAAAGGGC CACAGGGGTC CTGAAGGCCG CCCGGGACCA 
CCTGGACCTG TGGGGCCTCC AGGACCAGAT GAGTGTGAAA TCTTGGACAT CATCATGAAG 
ATGTGCTCAT GCTGTGAGTG CACCTGTGGT CCTGTCGACC TCCTCTTCGT GTTGGACAGC 
TCAGAGAGTA TTGGCCTGCA GAACTTCCAG ATTGCCAAGG ATTTCATCAT CAAAGTCATT 
GACCGCCTAA GCAAAGACGA GCGTGTGAAG TTTGAGCCTG GGGAGTCCCG AGTGGGCGTT 
GTGCAGTACA GCCACAACAA CACGCAGGAG CTGGTGGCTA TGGGAGATGC CAACATAGAC 
AACATTGGGG CACTCAAACA GGCGGTCAAG AATCTGAAAT GGATTGCTGG GGGCACCCAC 
ACAGGAGAAG CCCTGCAGTT CAGCAAGGAA AACCTGCTGC GGAGGTTCAC CTCCAACAAT 
AACGTGGCCA TCGTCATCAC AGATGGACGC TCTGACACGC TGCGGGACCG TACCCCACTG 
ACTTCTCTGT GTGAGGTCAC CCCGGTGGTT TCCCTTGGAA TAGGCGACAT TTTCCGGAAC 
AACCCAAACC CAGATCAACT GAATGACATC GCTTGTTTAG GCATGCCAAG GAGACAAGGA 
CTGTCCATTC AGAGAGACAA CTATGCCGAG CTCCTAGATG ACTCCTTCTT GCAGAACATC 
ACCTCGTACG TGTGCCGAGA GAAGAAATGT CCGGACTATA CCTGCCCAAT CACTTTTGCC 
AATCCGGCAG ACATCATGCT GTTGGTGGAC AGCTCCACCA GCGTGGGCAG CAAGAACTTT 
GACACCACCA AGAACTTTGT GAAGCGGCTT GCAGAGCGGT TCCTTGAGGC CAGCAAGCCA 
GCCGAAGATT CTGTGCGCGT CTCGGTGGTC CAGTACAGCG GCAGAAACCA GCAGAAGGTC 
GAAGTCCCAT TTCAGCGCAA CTACACGGTC ATCGCCAAAG CTGTTGACAA CATGGAGTTC 
ATGAACGAAG CTACAGATGT CAATGCCGCT CTGCAGTACA TCATGGGGCT GTACCAGCGG 
TCCTCTCGTT CTGGGGCGAA GAAGAAGGTG CTGGTGTTTT CTGATGGCAA CTCACAGGGG 
ATCACTGCAA GGGCCATCGA GAGGACTGTG CAGGAAGTTC AGCAGGCTGG TATTGAGGTC 
TACGTGCTGG CAGTGGGCAG CCAAGTCAAC GAGCCCAATG TCCGCGTCCT GGTAACAGGG 
AAGAGCACAA ACTATGACGT TGCCTATGGG GAGCGTCACC TGTTCCGTGT GCCTGACTAT 
ACCTCCCTGC TGCGTGGCGT CTTCTACCAA ACTGTCTCCA GGAAGATAGC TGTTGACTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Characterization of the chicken alpha 1(VI) collagen promoter.
European journal of biochemistry208(3)769-74(1992 Sep)
Koller E,Trueb B

Structural comparison of the chicken genes for alpha 1(VI) and alpha 2(VI) collagen.
European journal of biochemistry205(2)583-9(1992 Apr)
W?lchli C,Koller E,Trueb J,Trueb B

Alpha 1 chain of chick type VI collagen. The complete cDNA sequence reveals a hybrid molecule made of one short collagen and three von Willebrand factor type A-like domains.
The Journal of biological chemistry264(10)5575-80(1989 Apr)
Bonaldo P,Russo V,Bucciotti F,Bressan GM,Colombatti A

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COL6A1 cDNA ORF clone, Gallus gallus(chicken)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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