CG42402 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene
Clones
gRNAs

Summary

Gene Symbol	CG42402
Entrez Gene ID	7354470
Full Name	CG42402 gene product from transcript CG42402-RD
Synonyms	CG12453,CG41358,Dmel\CG42402,Dmel_CG12453,Dmel_CG41358
Gene Type	protein-coding
Organism	Drosophila melanogaster(fruit fly)

mRNA and Protein(s)

mRNA	Protein	Name
NM_001300713.1	NP_001287642.1	uncharacterized protein, isoform E
NM_001144066.3	NP_001137538.2	uncharacterized protein, isoform C
NM_001276243.1	NP_001263172.1	uncharacterized protein, isoform D

Pathways from BioSystems

Homologies

Drosophila melanogaster (fruit fly)	CG42402	NP_001263172.1
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP003572	XP_001688433.2

Gene Ontology
Bibliography

Related articles in PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
Matthews BB, Dos Santos G, Crosby MA, Emmert DB, St Pierre SE, Gramates LS, Zhou P, Schroeder AJ, Falls K, Strelets V, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
Crosby MA, Gramates LS, Dos Santos G, Matthews BB, St Pierre SE, Zhou P, Schroeder AJ, Falls K, Emmert DB, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Hoskins RA, Carlson JW, Kennedy C, Acevedo D, Evans-Holm M, Frise E, Wan KH, Park S, Mendez-Lago M, Rossi F, Villasante A, Dimitri P, Karpen GH, Celniker SE
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Smith CD, Shu S, Mungall CJ, Karpen GH
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)

Combined evidence annotation of transposable elements in genome sequences.
Quesneville H, Bergman CM, Andrieu O, Autard D, Nouaud D, Ashburner M, Anxolabehere D
PLoS computational biology1(2)166-75(2005 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following CG42402 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the CG42402 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)
OFa00126	NM_001144066.3 Latest version!	Drosophila melanogaster uncharacterized protein, transcript variant C (CG42402), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	12-14	$426.30 $609.00
OFa00126	NM_001276243.1 Latest version!	Drosophila melanogaster uncharacterized protein, transcript variant D (CG42402), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	12-14	$426.30 $609.00
OFa22438	NM_001300713.1 Latest version!	Drosophila melanogaster uncharacterized protein, transcript variant E (CG42402), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	12-14	$426.30 $609.00

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
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2-4 Clone	40% OFF
5 or more Clone	50% OFF
All Other ORF Clones
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*Business Day

** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

CG42402 ( NM_001144066.3 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_001137538.2 Drosophila melanogaster uncharacterized protein, transcript variant C (CG42402), mRNA.

Price & Availability↑

CloneID	OFa00126
Clone ID Related Accession (Same CDS sequence)	NM_001144066.3 , NM_001276243.1
Accession Version	NM_001144066.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2214bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	uncharacterized protein, isoform C
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033777). On Jan 16, 2013 this sequence version replaced NM_001144066.2. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGGATTACT GGAAGGCCAG GGTGTTGCTT CTGTCGTTCA TGTGTATCAT TAGCACCGCC 
ACGGCAGATG GGGAAATCAT TTTTCGCATT GATCCTCTCG CTTTACTGTC GGCCACCTTG 
CGGACATATC AAAAAGCGGC ATGTGACTCG GATCAAGTGC TTATAGCCTG TCCCCGTGGT 
ACTAGTATTT CAATCGAGTT TGCCCAGTAC AATAAGTTTG TTGCGAAAGA CGGCTACAGT 
ATTGAAGAAT TATGTCCTGG GTCTGGGGAA ATAAGATCGG AAATCCGGGG TAGAACAAAG 
CACCTTCTTC GCGGATCGAT CTTTGGCTCA CCACCACTAA AAACACCGTC TAGCAAATAC 
ATGACTGCTG GCCACTCCCT TGCAGTCCCA GTACAATCTG TTCCTGAATT CAACAGTAGC 
AGTGCCACTA GCTCCGAATC AATTTCAAGC GTGTCCCCTT CAGTTGATGA TATTCAAAGT 
ACTGATTACA ATACTGACAA CGCTTCCGAG AACTGCATGT GGCCAAATGC ATTACAGTAC 
TCCTTACTGC AAACTGTCGT CGAGGCCTGC CAAAAAAAGA AGCACTGCAA GTTCCACGGA 
TCCCCAGAGT TCTACGGCCA GGGCTCCAGC GGTGTGGGCG ACTCGTCTGG AACCAGCAGC 
TACCACAGCA GCACAGCCAG CTCCAATGCA ATAAGCAACG ATCCTTGTCC AAAACGCAAA 
AAAATTGTCG AAGTCGCTTA CAAATGTCGC CCATATGAGT TCCGAAGTAA GGTGGCTTGT 
CACAATGATG TAGCACAACT AGAGTGCAAT CCTTACTCCC GTATAGCCGT ATATAGTGCC 
AGCTTTGGAA GAACCGAGTA CGAGAGCATT CAGTGTCCCC AACCGCAAGG AGTTCGAGAA 
GAAACTTGTC TCGCTTCATA TGCCACGGAG ACTGTAATGC AAATTTGCCA TGGTAGACGT 
CGATGCAACC TTGCAGCCGA CGCAAATACT TTTGGAAGCC CTTGCCAACC AAATTCCCGA 
ATGTACTTGA AAGTTGTTTA TACGTGCGTG CCAAAGCAAG TCCTAAAAGA AAACAAGGCG 
TTGGAAGTGG AGGCTGACGA ATCTGAAGAT TTTGGAGGTG ATCTGAATGA CCTCTACGAC 
GATGAGCTTA TCTATAAGGA GTCCGAGGCA ATACCCAAAC TGTATAGCAA TACAACAACG 
ACAGTACGCC AAAACGGTAC CAGATCACTA GGGTTAGGAT TCAGCGTTAA TTCTGCGAAC 
AATCAGAGCA TCACAAACAG TTCGCTGGTC GTCGAAGGCG ATAGGAGTGA CGTCAATCCT 
GTCATGACGC ACAGTGCCGA CTTAAGTCTA GAGGAGGACC AAGAACGTCT TTATTTTTAT 
CTTCTTGCTC TGGTTTCACT CGGAGTGCTT ATTTCCATTG TCATATTCGG CACTAGGATA 
GCGCTTCAAA AACACCATCT GGTAACAGAA ACGCTCTCCA GCTCTTTTGC AAAAACGACG 
AGACGGGTTG AGGAAACAAC TATTCCAAGC GGCTTAAATG ACACAATTTC CGAAATAGAC 
GCTGAAATCG ACCTAAAAAC AACACTTCCT TTACCCAACT TGTCCAATAA AGAGAATTAC 
TTGACCTACG CACCAACCAG CAGTCTGTAC GCCGATCTCC CCCGTAATCA ACTGGTCTCA 
GCTTGTAGCC AAGGATCTGC CGCCGGGCAA ATAGGAAAGC CGCACATCGT TGGCACTCGT 
CAATCACCCG ACCTTATTGG CATAACACAG GGACCTTTTG TGACTACAAG TATGGCGAGT 
TTAGGCGGTC AGGGTCCGAT GGCTGCGATG GTGACGTCGG CTATTGTTAT TGGAGATTCT 
ACGCCCAATA GTAGTTCCTT AGGCGCTATG ATACCTATCA CCCAGTACAC AACTGCTCCA 
ACAATCAGAG GCGGGTACGT CATAAGTGCT GATAACATGG GTGTAATTCA GCGGGCGAAT 
AACACGCCCA CCCCGTTAAA CTTGCTGTCC GGGAGCACGC CAGAACAACC CCCGCAAGCC 
GGACCGATAA TCTCGGCGGC GGGCATGACT GTAACTCCAC AGGCCCATGG GGGCGCATCA 
AATCTGCGGC GTGTAAAGCC ACCATTCTTG CAGCCACAGC TTTCATATGA TGGCACTGCA 
CCACGGACTC TCTCCACCGG AGTAGCTGTT GGCTCGCAGT TTTATTATGG ATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001137538.2
CDS	308..2521
Translation	MDYWKARVLLLSFMCIISTATADGEIIFRIDPLALLSATLRTYQKAACDSDQVLIACPRGTSISIEFAQYNKFVAKDGYSIEELCPGSGEIRSEIRGRTKHLLRGSIFGSPPLKTPSSKYMTAGHSLAVPVQSVPEFNSSSATSSESISSVSPSVDDIQSTDYNTDNASENCMWPNALQYSLLQTVVEACQKKKHCKFHGSPEFYGQGSSGVGDSSGTSSYHSSTASSNAISNDPCPKRKKIVEVAYKCRPYEFRSKVACHNDVAQLECNPYSRIAVYSASFGRTEYESIQCPQPQGVREETCLASYATETVMQICHGRRRCNLAADANTFGSPCQPNSRMYLKVVYTCVPKQVLKENKALEVEADESEDFGGDLNDLYDDELIYKESEAIPKLYSNTTTTVRQNGTRSLGLGFSVNSANNQSITNSSLVVEGDRSDVNPVMTHSADLSLEEDQERLYFYLLALVSLGVLISIVIFGTRIALQKHHLVTETLSSSFAKTTRRVEETTIPSGLNDTISEIDAEIDLKTTLPLPNLSNKENYLTYAPTSSLYADLPRNQLVSACSQGSAAGQIGKPHIVGTRQSPDLIGITQGPFVTTSMASLGGQGPMAAMVTSAIVIGDSTPNSSSLGAMIPITQYTTAPTIRGGYVISADNMGVIQRANNTPTPLNLLSGSTPEQPPQAGPIISAAGMTVTPQAHGGASNLRRVKPPFLQPQLSYDGTAPRTLSTGVAVGSQFYYG

Target ORF information:

RefSeq Version	NM_001144066.3
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster uncharacterized protein, transcript variant C (CG42402), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001144066.3

ORF Insert Sequence:

ATGGATTACT GGAAGGCCAG GGTGTTGCTT CTGTCGTTCA TGTGTATCAT TAGCACCGCC 
ACGGCAGATG GGGAAATCAT TTTTCGCATT GATCCTCTCG CTTTACTGTC GGCCACCTTG 
CGGACATATC AAAAAGCGGC ATGTGACTCG GATCAAGTGC TTATAGCCTG TCCCCGTGGT 
ACTAGTATTT CAATCGAGTT TGCCCAGTAC AATAAGTTTG TTGCGAAAGA CGGCTACAGT 
ATTGAAGAAT TATGTCCTGG GTCTGGGGAA ATAAGATCGG AAATCCGGGG TAGAACAAAG 
CACCTTCTTC GCGGATCGAT CTTTGGCTCA CCACCACTAA AAACACCGTC TAGCAAATAC 
ATGACTGCTG GCCACTCCCT TGCAGTCCCA GTACAATCTG TTCCTGAATT CAACAGTAGC 
AGTGCCACTA GCTCCGAATC AATTTCAAGC GTGTCCCCTT CAGTTGATGA TATTCAAAGT 
ACTGATTACA ATACTGACAA CGCTTCCGAG AACTGCATGT GGCCAAATGC ATTACAGTAC 
TCCTTACTGC AAACTGTCGT CGAGGCCTGC CAAAAAAAGA AGCACTGCAA GTTCCACGGA 
TCCCCAGAGT TCTACGGCCA GGGCTCCAGC GGTGTGGGCG ACTCGTCTGG AACCAGCAGC 
TACCACAGCA GCACAGCCAG CTCCAATGCA ATAAGCAACG ATCCTTGTCC AAAACGCAAA 
AAAATTGTCG AAGTCGCTTA CAAATGTCGC CCATATGAGT TCCGAAGTAA GGTGGCTTGT 
CACAATGATG TAGCACAACT AGAGTGCAAT CCTTACTCCC GTATAGCCGT ATATAGTGCC 
AGCTTTGGAA GAACCGAGTA CGAGAGCATT CAGTGTCCCC AACCGCAAGG AGTTCGAGAA 
GAAACTTGTC TCGCTTCATA TGCCACGGAG ACTGTAATGC AAATTTGCCA TGGTAGACGT 
CGATGCAACC TTGCAGCCGA CGCAAATACT TTTGGAAGCC CTTGCCAACC AAATTCCCGA 
ATGTACTTGA AAGTTGTTTA TACGTGCGTG CCAAAGCAAG TCCTAAAAGA AAACAAGGCG 
TTGGAAGTGG AGGCTGACGA ATCTGAAGAT TTTGGAGGTG ATCTGAATGA CCTCTACGAC 
GATGAGCTTA TCTATAAGGA GTCCGAGGCA ATACCCAAAC TGTATAGCAA TACAACAACG 
ACAGTACGCC AAAACGGTAC CAGATCACTA GGGTTAGGAT TCAGCGTTAA TTCTGCGAAC 
AATCAGAGCA TCACAAACAG TTCGCTGGTC GTCGAAGGCG ATAGGAGTGA CGTCAATCCT 
GTCATGACGC ACAGTGCCGA CTTAAGTCTA GAGGAGGACC AAGAACGTCT TTATTTTTAT 
CTTCTTGCTC TGGTTTCACT CGGAGTGCTT ATTTCCATTG TCATATTCGG CACTAGGATA 
GCGCTTCAAA AACACCATCT GGTAACAGAA ACGCTCTCCA GCTCTTTTGC AAAAACGACG 
AGACGGGTTG AGGAAACAAC TATTCCAAGC GGCTTAAATG ACACAATTTC CGAAATAGAC 
GCTGAAATCG ACCTAAAAAC AACACTTCCT TTACCCAACT TGTCCAATAA AGAGAATTAC 
TTGACCTACG CACCAACCAG CAGTCTGTAC GCCGATCTCC CCCGTAATCA ACTGGTCTCA 
GCTTGTAGCC AAGGATCTGC CGCCGGGCAA ATAGGAAAGC CGCACATCGT TGGCACTCGT 
CAATCACCCG ACCTTATTGG CATAACACAG GGACCTTTTG TGACTACAAG TATGGCGAGT 
TTAGGCGGTC AGGGTCCGAT GGCTGCGATG GTGACGTCGG CTATTGTTAT TGGAGATTCT 
ACGCCCAATA GTAGTTCCTT AGGCGCTATG ATACCTATCA CCCAGTACAC AACTGCTCCA 
ACAATCAGAG GCGGGTACGT CATAAGTGCT GATAACATGG GTGTAATTCA GCGGGCGAAT 
AACACGCCCA CCCCGTTAAA CTTGCTGTCC GGGAGCACGC CAGAACAACC CCCGCAAGCC 
GGACCGATAA TCTCGGCGGC GGGCATGACT GTAACTCCAC AGGCCCATGG GGGCGCATCA 
AATCTGCGGC GTGTAAAGCC ACCATTCTTG CAGCCACAGC TTTCATATGA TGGCACTGCA 
CCACGGACTC TCTCCACCGG AGTAGCTGTT GGCTCGCAGT TTTATTATGG ATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

CG42402 ( NM_001276243.1 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_001263172.1 Drosophila melanogaster uncharacterized protein, transcript variant D (CG42402), mRNA.

Price & Availability↑

CloneID	OFa00126
Clone ID Related Accession (Same CDS sequence)	NM_001144066.3 , NM_001276243.1
Accession Version	NM_001276243.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2214bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	uncharacterized protein, isoform D
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033777). ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGGATTACT GGAAGGCCAG GGTGTTGCTT CTGTCGTTCA TGTGTATCAT TAGCACCGCC 
ACGGCAGATG GGGAAATCAT TTTTCGCATT GATCCTCTCG CTTTACTGTC GGCCACCTTG 
CGGACATATC AAAAAGCGGC ATGTGACTCG GATCAAGTGC TTATAGCCTG TCCCCGTGGT 
ACTAGTATTT CAATCGAGTT TGCCCAGTAC AATAAGTTTG TTGCGAAAGA CGGCTACAGT 
ATTGAAGAAT TATGTCCTGG GTCTGGGGAA ATAAGATCGG AAATCCGGGG TAGAACAAAG 
CACCTTCTTC GCGGATCGAT CTTTGGCTCA CCACCACTAA AAACACCGTC TAGCAAATAC 
ATGACTGCTG GCCACTCCCT TGCAGTCCCA GTACAATCTG TTCCTGAATT CAACAGTAGC 
AGTGCCACTA GCTCCGAATC AATTTCAAGC GTGTCCCCTT CAGTTGATGA TATTCAAAGT 
ACTGATTACA ATACTGACAA CGCTTCCGAG AACTGCATGT GGCCAAATGC ATTACAGTAC 
TCCTTACTGC AAACTGTCGT CGAGGCCTGC CAAAAAAAGA AGCACTGCAA GTTCCACGGA 
TCCCCAGAGT TCTACGGCCA GGGCTCCAGC GGTGTGGGCG ACTCGTCTGG AACCAGCAGC 
TACCACAGCA GCACAGCCAG CTCCAATGCA ATAAGCAACG ATCCTTGTCC AAAACGCAAA 
AAAATTGTCG AAGTCGCTTA CAAATGTCGC CCATATGAGT TCCGAAGTAA GGTGGCTTGT 
CACAATGATG TAGCACAACT AGAGTGCAAT CCTTACTCCC GTATAGCCGT ATATAGTGCC 
AGCTTTGGAA GAACCGAGTA CGAGAGCATT CAGTGTCCCC AACCGCAAGG AGTTCGAGAA 
GAAACTTGTC TCGCTTCATA TGCCACGGAG ACTGTAATGC AAATTTGCCA TGGTAGACGT 
CGATGCAACC TTGCAGCCGA CGCAAATACT TTTGGAAGCC CTTGCCAACC AAATTCCCGA 
ATGTACTTGA AAGTTGTTTA TACGTGCGTG CCAAAGCAAG TCCTAAAAGA AAACAAGGCG 
TTGGAAGTGG AGGCTGACGA ATCTGAAGAT TTTGGAGGTG ATCTGAATGA CCTCTACGAC 
GATGAGCTTA TCTATAAGGA GTCCGAGGCA ATACCCAAAC TGTATAGCAA TACAACAACG 
ACAGTACGCC AAAACGGTAC CAGATCACTA GGGTTAGGAT TCAGCGTTAA TTCTGCGAAC 
AATCAGAGCA TCACAAACAG TTCGCTGGTC GTCGAAGGCG ATAGGAGTGA CGTCAATCCT 
GTCATGACGC ACAGTGCCGA CTTAAGTCTA GAGGAGGACC AAGAACGTCT TTATTTTTAT 
CTTCTTGCTC TGGTTTCACT CGGAGTGCTT ATTTCCATTG TCATATTCGG CACTAGGATA 
GCGCTTCAAA AACACCATCT GGTAACAGAA ACGCTCTCCA GCTCTTTTGC AAAAACGACG 
AGACGGGTTG AGGAAACAAC TATTCCAAGC GGCTTAAATG ACACAATTTC CGAAATAGAC 
GCTGAAATCG ACCTAAAAAC AACACTTCCT TTACCCAACT TGTCCAATAA AGAGAATTAC 
TTGACCTACG CACCAACCAG CAGTCTGTAC GCCGATCTCC CCCGTAATCA ACTGGTCTCA 
GCTTGTAGCC AAGGATCTGC CGCCGGGCAA ATAGGAAAGC CGCACATCGT TGGCACTCGT 
CAATCACCCG ACCTTATTGG CATAACACAG GGACCTTTTG TGACTACAAG TATGGCGAGT 
TTAGGCGGTC AGGGTCCGAT GGCTGCGATG GTGACGTCGG CTATTGTTAT TGGAGATTCT 
ACGCCCAATA GTAGTTCCTT AGGCGCTATG ATACCTATCA CCCAGTACAC AACTGCTCCA 
ACAATCAGAG GCGGGTACGT CATAAGTGCT GATAACATGG GTGTAATTCA GCGGGCGAAT 
AACACGCCCA CCCCGTTAAA CTTGCTGTCC GGGAGCACGC CAGAACAACC CCCGCAAGCC 
GGACCGATAA TCTCGGCGGC GGGCATGACT GTAACTCCAC AGGCCCATGG GGGCGCATCA 
AATCTGCGGC GTGTAAAGCC ACCATTCTTG CAGCCACAGC TTTCATATGA TGGCACTGCA 
CCACGGACTC TCTCCACCGG AGTAGCTGTT GGCTCGCAGT TTTATTATGG ATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001263172.1
CDS	1207..3420
Translation	MDYWKARVLLLSFMCIISTATADGEIIFRIDPLALLSATLRTYQKAACDSDQVLIACPRGTSISIEFAQYNKFVAKDGYSIEELCPGSGEIRSEIRGRTKHLLRGSIFGSPPLKTPSSKYMTAGHSLAVPVQSVPEFNSSSATSSESISSVSPSVDDIQSTDYNTDNASENCMWPNALQYSLLQTVVEACQKKKHCKFHGSPEFYGQGSSGVGDSSGTSSYHSSTASSNAISNDPCPKRKKIVEVAYKCRPYEFRSKVACHNDVAQLECNPYSRIAVYSASFGRTEYESIQCPQPQGVREETCLASYATETVMQICHGRRRCNLAADANTFGSPCQPNSRMYLKVVYTCVPKQVLKENKALEVEADESEDFGGDLNDLYDDELIYKESEAIPKLYSNTTTTVRQNGTRSLGLGFSVNSANNQSITNSSLVVEGDRSDVNPVMTHSADLSLEEDQERLYFYLLALVSLGVLISIVIFGTRIALQKHHLVTETLSSSFAKTTRRVEETTIPSGLNDTISEIDAEIDLKTTLPLPNLSNKENYLTYAPTSSLYADLPRNQLVSACSQGSAAGQIGKPHIVGTRQSPDLIGITQGPFVTTSMASLGGQGPMAAMVTSAIVIGDSTPNSSSLGAMIPITQYTTAPTIRGGYVISADNMGVIQRANNTPTPLNLLSGSTPEQPPQAGPIISAAGMTVTPQAHGGASNLRRVKPPFLQPQLSYDGTAPRTLSTGVAVGSQFYYG

Target ORF information:

RefSeq Version	NM_001276243.1
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster uncharacterized protein, transcript variant D (CG42402), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001276243.1

ORF Insert Sequence:

ATGGATTACT GGAAGGCCAG GGTGTTGCTT CTGTCGTTCA TGTGTATCAT TAGCACCGCC 
ACGGCAGATG GGGAAATCAT TTTTCGCATT GATCCTCTCG CTTTACTGTC GGCCACCTTG 
CGGACATATC AAAAAGCGGC ATGTGACTCG GATCAAGTGC TTATAGCCTG TCCCCGTGGT 
ACTAGTATTT CAATCGAGTT TGCCCAGTAC AATAAGTTTG TTGCGAAAGA CGGCTACAGT 
ATTGAAGAAT TATGTCCTGG GTCTGGGGAA ATAAGATCGG AAATCCGGGG TAGAACAAAG 
CACCTTCTTC GCGGATCGAT CTTTGGCTCA CCACCACTAA AAACACCGTC TAGCAAATAC 
ATGACTGCTG GCCACTCCCT TGCAGTCCCA GTACAATCTG TTCCTGAATT CAACAGTAGC 
AGTGCCACTA GCTCCGAATC AATTTCAAGC GTGTCCCCTT CAGTTGATGA TATTCAAAGT 
ACTGATTACA ATACTGACAA CGCTTCCGAG AACTGCATGT GGCCAAATGC ATTACAGTAC 
TCCTTACTGC AAACTGTCGT CGAGGCCTGC CAAAAAAAGA AGCACTGCAA GTTCCACGGA 
TCCCCAGAGT TCTACGGCCA GGGCTCCAGC GGTGTGGGCG ACTCGTCTGG AACCAGCAGC 
TACCACAGCA GCACAGCCAG CTCCAATGCA ATAAGCAACG ATCCTTGTCC AAAACGCAAA 
AAAATTGTCG AAGTCGCTTA CAAATGTCGC CCATATGAGT TCCGAAGTAA GGTGGCTTGT 
CACAATGATG TAGCACAACT AGAGTGCAAT CCTTACTCCC GTATAGCCGT ATATAGTGCC 
AGCTTTGGAA GAACCGAGTA CGAGAGCATT CAGTGTCCCC AACCGCAAGG AGTTCGAGAA 
GAAACTTGTC TCGCTTCATA TGCCACGGAG ACTGTAATGC AAATTTGCCA TGGTAGACGT 
CGATGCAACC TTGCAGCCGA CGCAAATACT TTTGGAAGCC CTTGCCAACC AAATTCCCGA 
ATGTACTTGA AAGTTGTTTA TACGTGCGTG CCAAAGCAAG TCCTAAAAGA AAACAAGGCG 
TTGGAAGTGG AGGCTGACGA ATCTGAAGAT TTTGGAGGTG ATCTGAATGA CCTCTACGAC 
GATGAGCTTA TCTATAAGGA GTCCGAGGCA ATACCCAAAC TGTATAGCAA TACAACAACG 
ACAGTACGCC AAAACGGTAC CAGATCACTA GGGTTAGGAT TCAGCGTTAA TTCTGCGAAC 
AATCAGAGCA TCACAAACAG TTCGCTGGTC GTCGAAGGCG ATAGGAGTGA CGTCAATCCT 
GTCATGACGC ACAGTGCCGA CTTAAGTCTA GAGGAGGACC AAGAACGTCT TTATTTTTAT 
CTTCTTGCTC TGGTTTCACT CGGAGTGCTT ATTTCCATTG TCATATTCGG CACTAGGATA 
GCGCTTCAAA AACACCATCT GGTAACAGAA ACGCTCTCCA GCTCTTTTGC AAAAACGACG 
AGACGGGTTG AGGAAACAAC TATTCCAAGC GGCTTAAATG ACACAATTTC CGAAATAGAC 
GCTGAAATCG ACCTAAAAAC AACACTTCCT TTACCCAACT TGTCCAATAA AGAGAATTAC 
TTGACCTACG CACCAACCAG CAGTCTGTAC GCCGATCTCC CCCGTAATCA ACTGGTCTCA 
GCTTGTAGCC AAGGATCTGC CGCCGGGCAA ATAGGAAAGC CGCACATCGT TGGCACTCGT 
CAATCACCCG ACCTTATTGG CATAACACAG GGACCTTTTG TGACTACAAG TATGGCGAGT 
TTAGGCGGTC AGGGTCCGAT GGCTGCGATG GTGACGTCGG CTATTGTTAT TGGAGATTCT 
ACGCCCAATA GTAGTTCCTT AGGCGCTATG ATACCTATCA CCCAGTACAC AACTGCTCCA 
ACAATCAGAG GCGGGTACGT CATAAGTGCT GATAACATGG GTGTAATTCA GCGGGCGAAT 
AACACGCCCA CCCCGTTAAA CTTGCTGTCC GGGAGCACGC CAGAACAACC CCCGCAAGCC 
GGACCGATAA TCTCGGCGGC GGGCATGACT GTAACTCCAC AGGCCCATGG GGGCGCATCA 
AATCTGCGGC GTGTAAAGCC ACCATTCTTG CAGCCACAGC TTTCATATGA TGGCACTGCA 
CCACGGACTC TCTCCACCGG AGTAGCTGTT GGCTCGCAGT TTTATTATGG ATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

CG42402 ( NM_001300713.1 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_001287642.1 Drosophila melanogaster uncharacterized protein, transcript variant E (CG42402), mRNA.

Price & Availability↑

CloneID	OFa22438
Clone ID Related Accession (Same CDS sequence)	NM_001300713.1
Accession Version	NM_001300713.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2244bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	uncharacterized protein, isoform E
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033777). ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGGAGTCGC GCCTGGCTTG GAAGAGATAC ACCTCATATC CACAACCCCT TCGTCATCGT 
GTGGTGCTTA TTGGATGGGC TTTAATATGG ACTATGTCCC TAAACTCTGT ATTCTGTGGA 
GAAAAATTGG CTTTACTGTC GGCCACCTTG CGGACATATC AAAAAGCGGC ATGTGACTCG 
GATCAAGTGC TTATAGCCTG TCCCCGTGGT ACTAGTATTT CAATCGAGTT TGCCCAGTAC 
AATAAGTTTG TTGCGAAAGA CGGCTACAGT ATTGAAGAAT TATGTCCTGG GTCTGGGGAA 
ATAAGATCGG AAATCCGGGG TAGAACAAAG CACCTTCTTC GCGGATCGAT CTTTGGCTCA 
CCACCACTAA AAACACCGTC TAGCAAATAC ATGACTGCTG GCCACTCCCT TGCAGTCCCA 
GTACAATCTG TTCCTGAATT CAACAGTAGC AGTGCCACTA GCTCCGAATC AATTTCAAGC 
GTGTCCCCTT CAGTTGATGA TATTCAAAGT ACTGATTACA ATACTGACAA CGCTTCCGAG 
AACTGCATGT GGCCAAATGC ATTACAGTAC TCCTTACTGC AAACTGTCGT CGAGGCCTGC 
CAAAAAAAGA AGCACTGCAA GTTCCACGGA TCCCCAGAGT TCTACGGCCA GGGCTCCAGC 
GGTGTGGGCG ACTCGTCTGG AACCAGCAGC TACCACAGCA GCACAGCCAG CTCCAATGCA 
ATAAGCAACG ATCCTTGTCC AAAACGCAAA AAAATTGTCG AAGTCGCTTA CAAATGTCGC 
CCATATGAGT TCCGAAGTAA GGTGGCTTGT CACAATGATG TAGCACAACT AGAGTGCAAT 
CCTTACTCCC GTATAGCCGT ATATAGTGCC AGCTTTGGAA GAACCGAGTA CGAGAGCATT 
CAGTGTCCCC AACCGCAAGG AGTTCGAGAA GAAACTTGTC TCGCTTCATA TGCCACGGAG 
ACTGTAATGC AAATTTGCCA TGGTAGACGT CGATGCAACC TTGCAGCCGA CGCAAATACT 
TTTGGAAGCC CTTGCCAACC AAATTCCCGA ATGTACTTGA AAGTTGTTTA TACGTGCGTG 
CCAAAGCAAG TCCTAAAAGA AAACAAGGCG TTGGAAGTGG AGGCTGACGA ATCTGAAGAT 
TTTGGAGGTG ATCTGAATGA CCTCTACGAC GATGAGCTTA TCTATAAGGA GTCCGAGGCA 
ATACCCAAAC TGTATAGCAA TACAACAACG ACAGTACGCC AAAACGGTAC CAGATCACTA 
GGGTTAGGAT TCAGCGTTAA TTCTGCGAAC AATCAGAGCA TCACAAACAG TTCGCTGGTC 
GTCGAAGGCG ATAGGAGTGA CGTCAATCCT GTCATGACGC ACAGTGCCGA CTTAAGTCTA 
GAGGAGGACC AAGAACGTCT TTATTTTTAT CTTCTTGCTC TGGTTTCACT CGGAGTGCTT 
ATTTCCATTG TCATATTCGG CACTAGGATA GCGCTTCAAA AACACCATCT GGTAACAGAA 
ACGCTCTCCA GCTCTTTTGC AAAAACGACG AGACGGGTTG AGGAAACAAC TATTCCAAGC 
GGCTTAAATG ACACAATTTC CGAAATAGAC GCTGAAATCG ACCTAAAAAC AACACTTCCT 
TTACCCAACT TGTCCAATAA AGAGAATTAC TTGACCTACG CACCAACCAG CAGTCTGTAC 
GCCGATCTCC CCCGTAATCA ACTGGTCTCA GCTTGTAGCC AAGGATCTGC CGCCGGGCAA 
ATAGGAAAGC CGCACATCGT TGGCACTCGT CAATCACCCG ACCTTATTGG CATAACACAG 
GGACCTTTTG TGACTACAAG TATGGCGAGT TTAGGCGGTC AGGGTCCGAT GGCTGCGATG 
GTGACGTCGG CTATTGTTAT TGGAGATTCT ACGCCCAATA GTAGTTCCTT AGGCGCTATG 
ATACCTATCA CCCAGTACAC AACTGCTCCA ACAATCAGAG GCGGGTACGT CATAAGTGCT 
GATAACATGG GTGTAATTCA GCGGGCGAAT AACACGCCCA CCCCGTTAAA CTTGCTGTCC 
GGGAGCACGC CAGAACAACC CCCGCAAGCC GGACCGATAA TCTCGGCGGC GGGCATGACT 
GTAACTCCAC AGGCCCATGG GGGCGCATCA AATCTGCGGC GTGTAAAGCC ACCATTCTTG 
CAGCCACAGC TTTCATATGA TGGCACTGCA CCACGGACTC TCTCCACCGG AGTAGCTGTT 
GGCTCGCAGT TTTATTATGG ATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001287642.1
CDS	916..3159
Translation	MESRLAWKRYTSYPQPLRHRVVLIGWALIWTMSLNSVFCGEKLALLSATLRTYQKAACDSDQVLIACPRGTSISIEFAQYNKFVAKDGYSIEELCPGSGEIRSEIRGRTKHLLRGSIFGSPPLKTPSSKYMTAGHSLAVPVQSVPEFNSSSATSSESISSVSPSVDDIQSTDYNTDNASENCMWPNALQYSLLQTVVEACQKKKHCKFHGSPEFYGQGSSGVGDSSGTSSYHSSTASSNAISNDPCPKRKKIVEVAYKCRPYEFRSKVACHNDVAQLECNPYSRIAVYSASFGRTEYESIQCPQPQGVREETCLASYATETVMQICHGRRRCNLAADANTFGSPCQPNSRMYLKVVYTCVPKQVLKENKALEVEADESEDFGGDLNDLYDDELIYKESEAIPKLYSNTTTTVRQNGTRSLGLGFSVNSANNQSITNSSLVVEGDRSDVNPVMTHSADLSLEEDQERLYFYLLALVSLGVLISIVIFGTRIALQKHHLVTETLSSSFAKTTRRVEETTIPSGLNDTISEIDAEIDLKTTLPLPNLSNKENYLTYAPTSSLYADLPRNQLVSACSQGSAAGQIGKPHIVGTRQSPDLIGITQGPFVTTSMASLGGQGPMAAMVTSAIVIGDSTPNSSSLGAMIPITQYTTAPTIRGGYVISADNMGVIQRANNTPTPLNLLSGSTPEQPPQAGPIISAAGMTVTPQAHGGASNLRRVKPPFLQPQLSYDGTAPRTLSTGVAVGSQFYYG

Target ORF information:

RefSeq Version	NM_001300713.1
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster uncharacterized protein, transcript variant E (CG42402), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001300713.1

ORF Insert Sequence:

ATGGAGTCGC GCCTGGCTTG GAAGAGATAC ACCTCATATC CACAACCCCT TCGTCATCGT 
GTGGTGCTTA TTGGATGGGC TTTAATATGG ACTATGTCCC TAAACTCTGT ATTCTGTGGA 
GAAAAATTGG CTTTACTGTC GGCCACCTTG CGGACATATC AAAAAGCGGC ATGTGACTCG 
GATCAAGTGC TTATAGCCTG TCCCCGTGGT ACTAGTATTT CAATCGAGTT TGCCCAGTAC 
AATAAGTTTG TTGCGAAAGA CGGCTACAGT ATTGAAGAAT TATGTCCTGG GTCTGGGGAA 
ATAAGATCGG AAATCCGGGG TAGAACAAAG CACCTTCTTC GCGGATCGAT CTTTGGCTCA 
CCACCACTAA AAACACCGTC TAGCAAATAC ATGACTGCTG GCCACTCCCT TGCAGTCCCA 
GTACAATCTG TTCCTGAATT CAACAGTAGC AGTGCCACTA GCTCCGAATC AATTTCAAGC 
GTGTCCCCTT CAGTTGATGA TATTCAAAGT ACTGATTACA ATACTGACAA CGCTTCCGAG 
AACTGCATGT GGCCAAATGC ATTACAGTAC TCCTTACTGC AAACTGTCGT CGAGGCCTGC 
CAAAAAAAGA AGCACTGCAA GTTCCACGGA TCCCCAGAGT TCTACGGCCA GGGCTCCAGC 
GGTGTGGGCG ACTCGTCTGG AACCAGCAGC TACCACAGCA GCACAGCCAG CTCCAATGCA 
ATAAGCAACG ATCCTTGTCC AAAACGCAAA AAAATTGTCG AAGTCGCTTA CAAATGTCGC 
CCATATGAGT TCCGAAGTAA GGTGGCTTGT CACAATGATG TAGCACAACT AGAGTGCAAT 
CCTTACTCCC GTATAGCCGT ATATAGTGCC AGCTTTGGAA GAACCGAGTA CGAGAGCATT 
CAGTGTCCCC AACCGCAAGG AGTTCGAGAA GAAACTTGTC TCGCTTCATA TGCCACGGAG 
ACTGTAATGC AAATTTGCCA TGGTAGACGT CGATGCAACC TTGCAGCCGA CGCAAATACT 
TTTGGAAGCC CTTGCCAACC AAATTCCCGA ATGTACTTGA AAGTTGTTTA TACGTGCGTG 
CCAAAGCAAG TCCTAAAAGA AAACAAGGCG TTGGAAGTGG AGGCTGACGA ATCTGAAGAT 
TTTGGAGGTG ATCTGAATGA CCTCTACGAC GATGAGCTTA TCTATAAGGA GTCCGAGGCA 
ATACCCAAAC TGTATAGCAA TACAACAACG ACAGTACGCC AAAACGGTAC CAGATCACTA 
GGGTTAGGAT TCAGCGTTAA TTCTGCGAAC AATCAGAGCA TCACAAACAG TTCGCTGGTC 
GTCGAAGGCG ATAGGAGTGA CGTCAATCCT GTCATGACGC ACAGTGCCGA CTTAAGTCTA 
GAGGAGGACC AAGAACGTCT TTATTTTTAT CTTCTTGCTC TGGTTTCACT CGGAGTGCTT 
ATTTCCATTG TCATATTCGG CACTAGGATA GCGCTTCAAA AACACCATCT GGTAACAGAA 
ACGCTCTCCA GCTCTTTTGC AAAAACGACG AGACGGGTTG AGGAAACAAC TATTCCAAGC 
GGCTTAAATG ACACAATTTC CGAAATAGAC GCTGAAATCG ACCTAAAAAC AACACTTCCT 
TTACCCAACT TGTCCAATAA AGAGAATTAC TTGACCTACG CACCAACCAG CAGTCTGTAC 
GCCGATCTCC CCCGTAATCA ACTGGTCTCA GCTTGTAGCC AAGGATCTGC CGCCGGGCAA 
ATAGGAAAGC CGCACATCGT TGGCACTCGT CAATCACCCG ACCTTATTGG CATAACACAG 
GGACCTTTTG TGACTACAAG TATGGCGAGT TTAGGCGGTC AGGGTCCGAT GGCTGCGATG 
GTGACGTCGG CTATTGTTAT TGGAGATTCT ACGCCCAATA GTAGTTCCTT AGGCGCTATG 
ATACCTATCA CCCAGTACAC AACTGCTCCA ACAATCAGAG GCGGGTACGT CATAAGTGCT 
GATAACATGG GTGTAATTCA GCGGGCGAAT AACACGCCCA CCCCGTTAAA CTTGCTGTCC 
GGGAGCACGC CAGAACAACC CCCGCAAGCC GGACCGATAA TCTCGGCGGC GGGCATGACT 
GTAACTCCAC AGGCCCATGG GGGCGCATCA AATCTGCGGC GTGTAAAGCC ACCATTCTTG 
CAGCCACAGC TTTCATATGA TGGCACTGCA CCACGGACTC TCTCCACCGG AGTAGCTGTT 
GGCTCGCAGT TTTATTATGG ATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)
Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM,

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)
Crosby MA,Gramates LS,Dos Santos G,Matthews BB,St Pierre SE,Zhou P,Schroeder AJ,Falls K,Emmert DB,Russo SM,Gelbart WM,

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)
Hoskins RA,Carlson JW,Kennedy C,Acevedo D,Evans-Holm M,Frise E,Wan KH,Park S,Mendez-Lago M,Rossi F,Villasante A,Dimitri P,Karpen GH,Celniker SE

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)
Smith CD,Shu S,Mungall CJ,Karpen GH

Combined evidence annotation of transposable elements in genome sequences.
PLoS computational biology1(2)166-75(2005 Jul)
Quesneville H,Bergman CM,Andrieu O,Autard D,Nouaud D,Ashburner M,Anxolabehere D

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CG42402 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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