CG42296 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene
Clones
gRNAs

Summary

Gene Symbol	CG42296
Entrez Gene ID	53544
Full Name	CG42296 gene product from transcript CG42296-RA
Synonyms	CG15378,Dmel\CG42296,Dmel_CG15378
Gene Type	protein-coding
Organism	Drosophila melanogaster(fruit fly)
Genome	Chromosome: 2L Map Location: 22C1-22C1

mRNA and Protein(s)

mRNA	Protein	Name
NM_144381.3	NP_652638.2	uncharacterized protein

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
Matthews BB, Dos Santos G, Crosby MA, Emmert DB, St Pierre SE, Gramates LS, Zhou P, Schroeder AJ, Falls K, Strelets V, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
Crosby MA, Gramates LS, Dos Santos G, Matthews BB, St Pierre SE, Zhou P, Schroeder AJ, Falls K, Emmert DB, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Hoskins RA, Carlson JW, Kennedy C, Acevedo D, Evans-Holm M, Frise E, Wan KH, Park S, Mendez-Lago M, Rossi F, Villasante A, Dimitri P, Karpen GH, Celniker SE
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Smith CD, Shu S, Mungall CJ, Karpen GH
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)

Combined evidence annotation of transposable elements in genome sequences.
Quesneville H, Bergman CM, Andrieu O, Autard D, Nouaud D, Ashburner M, Anxolabehere D
PLoS computational biology1(2)166-75(2005 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following CG42296 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the CG42296 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OFa15338	NM_144381.3 Latest version!	Drosophila melanogaster uncharacterized protein (CG42296), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	12-14	$510.30 $729.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

CG42296 ( NM_144381.3 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_652638.2 Drosophila melanogaster uncharacterized protein (CG42296), mRNA.

Price & Availability↑

CloneID	OFa15338
Clone ID Related Accession (Same CDS sequence)	NM_144381.3
Accession Version	NM_144381.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2985bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	uncharacterized protein
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033779). On Jan 16, 2013 this sequence version replaced NM_144381.2. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGAGGCAGC TGCTGGTTTA CGCGTTGGTC GCGGGCTTGT TTTACTTTTC CGAAGGCAAG 
CCGTGCCCCG AAAAGACACG CCCCCACAAA ACCCGCTGCG ACGCCTTCTA CAAGTGCCGG 
GAACTGCCCT CCAACTCGCA CGTTTGGATT CCGGTGAAGT GCAACGAGGG ATTGGTGTTC 
GAGTCCAGTT TGGGCAGCTG CGTTCTGCCT GGCGAGGATT GGGAGTGCAT CACCCCGAGT 
GAGATGAGCT CCACGCAGTC GCCACCTGGG AGGCCGGACG CGGACATACT GATAGTCAAC 
GACATGGACG AGGCGGGTCT GCTTTTGAGC GACTCCAGTC ACAAGGACGA TGGCACCGTG 
GAAATAATTC TAGACTCCAC ACTGAGCAGT GAGGAGAATG AGGTTAATGA GGAGGCGGCC 
AAGAGCAAGC CGCAGCCGGA GGAGGACTTC TCTTCCAATC ACAACTTCGA CTCGAGCGGC 
GATGGGGAGC TGGTGGAACT GGATTCCCCC GCTGGTCTGA AGCCCGAGAA CCGCGAGGAG 
GTGACTTCCA GCAGCATGGA GCACAGAACA GAGGTGGAAA AGCTAAGAAC GGAACTTAAA 
CAGGTGGCTG GTATCAGCGA AATAGCCAAG CCGGGATCGC CCATCGATCC CAGCCTGACT 
GCTCACCTGC AGAGATTGTC CCAACTGATT GATGGACTGC AGCAGACCTA CCAGAAGACA 
GATAAACCTC AGACGGAAAT GCGACCAGAC CAGTTGAATG CTTTTCTGGC GCACTTTGAC 
ATCAAGAACC GGTATGAGAT GATGAACCCC ATGGAGCAGA CCTCTTCCAC AATCACCACC 
ACCACCAGTA CCACAGAAGC ACCCAAAATA AAGCCAAGGC TACCGGAACC CACCTCGAAT 
AAGACCCGCC TGCAGGAGCA CCTGAGCCAC CATCGCCTGG AACCGGAGAC GAAACTAATG 
CTCAGCAATG CCGTGCCCTA CTCCTCGCAT GGAACCACCG GGCAGGGATA TGCCAACTCT 
CAGATAGTGG TGAATCGCCC CGAAGGCTCT GTGATGTTTG CCCTGCCGCC CAATTACGGA 
ATGAGCCAGG AACAGGGTTC GTATGTAAGC CACCAGAGTC ACGAGTACAG CGATCATGAG 
CCCAAGATAT CGGAGGACAC CTTGAAGACG GTTCTGGAGC TGTCCAAGCA AATGATCGCC 
GCACAAAACC TGCCCAAAGT GCTGCCCAAT CCGGGCTTCA ATGGTGCCTA TTACCAACCC 
ATTCTGCAGC CTGTTTTCAT GTCGCCCCAG GGCAATCCCT TCCAGCAGTA CTACGGCATG 
CCGCCTCCCT TAAATCCACA CTACATGCAG CACAAGAAGC ACTCCGCTGG AGGCGGTTCC 
TCTAGCAATG GCTATAACAA GCCCAGCACC ACCATTATTC ACAACAATGT GATACCTGTT 
CACCTATCCA GCACGAGTTC GGGGGAAAAA GAGGTGCTGG ACACCTATGG CAATAGTTTG 
GGGGTATATC CCAGCATGGA TAAACATGTG ACCGCCAGCC AGGCCAGTGG CATGGAGTAC 
ATGACCACAG CTCGGCCCGT TACGATCGCA ACTACTGCCA GCACCTACTC CGCACAGTAC 
GGATCCCAGT CCCCGTTCGC CAGTGACTAC ACCCTGACCA CTCCGCGACC CTTTGAGCAG 
CAACCTTCAG CCGCCACAGT GGCCACGTAC TATACTCCAA GTCCGCATTT GGGCGAGCAC 
AACGCGAATA GGGTATACCA ACCCACCGAA TCGTATCCCA CGATGAATAT ACCCAGACCC 
ATGGACATGT TTCCAGGACA AATCGATGCG GACAGGGTGA GCATTCGACC CAACTCGCAG 
AAAATCGAAA GCATGGAGAT GGACGAAGAT ATGATTAAGG CCAACTATCA AAGTGGCTCT 
GGTATTGGGA ATGGGAATGG GAACACTCTT CCTCACGTAC TGACCTACAG CAGCGACATG 
AGCCAGCAAT TAGCACCTTC GAATGGCTAT CTGGAGCAGA GCTATAGCCT CCAGCAGCCG 
CAGCACCACC ACCATCCATA TATGCCCAGG CCCAGACCCA CGATGAGCAG CAGTATCTAT 
AGTGACTCGG ATGGCAATAT GGAGATGAGC ATGTTCACCA GCAGTCCGAA TCTTAACCCA 
TTCAAGGGCG GCAACGTGAA GTACCCAGGA AGCACTTCGC CCAATGGCCA GCTGGTTAAC 
TTCAATGGCA ACTTCATCAG CCTGGATGTC TTCCAGAAAT CCATACTTCC CCTTATGACC 
AAGTCGCCAT CCGCTTTAAA TGAGCTGGGA AACGTGGAGG TCATCACATG CCAGGCGGGC 
GTAAGACAGC CAAATCAAAC TGACTGCACG CGATATTTCG TTTGCAGCAA GAAGGATGGC 
AAGGTCCTGT CCTACTCCTG TCCGCCTTAC ACGGCCTTCA ATAAGCAGAC CAGGATTTGC 
GATGCCCCCA CCTATGCACA GTGCAGCAAT GTTATACCTG CCTTCAATGG CTACACCATC 
GATAGCAATA GGAGGCTCCA GATGGAGGCC ATCAAGATGC TGAGTGAGGC CAAGAGGAGA 
CAGGAGGCTG CCTTAAAGGC CCAGAGCATA GCCAGTCTGA TCCAGCAATA CGGAAGCGCG 
CAAAAGGCGC AACCTGGCAT ATCGTCCAAC GTAGAGAATG ATCCCCTGGA CTCGTATGTG 
GTCAGCTTGC CAGAAGTCAG TCTGTCCACC ACCACCAGCA GACCCACCAT CATCCAGAGC 
AGCAGTGGTG TGAGTAGTGG TGGATCGTCG ACTCCCGCAA AGAAGAGAAA GTACTACTGC 
AAGGAGGGCG ATAAGATCCC GGATCAGACC TCCATTTCCA GCTACTTTGT GTGCTACAAG 
AACGCCCAGG GTCAAATGAA GGGCCACAAG ATGAGCTGCT CCAAGAGCCT GCTCTTCTGT 
CCCAAGACCC TCATGTGCAC CCTCGCCTCC AAGTGCACCG ACTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_652638.2
CDS	106..3090
Translation	MRQLLVYALVAGLFYFSEGKPCPEKTRPHKTRCDAFYKCRELPSNSHVWIPVKCNEGLVFESSLGSCVLPGEDWECITPSEMSSTQSPPGRPDADILIVNDMDEAGLLLSDSSHKDDGTVEIILDSTLSSEENEVNEEAAKSKPQPEEDFSSNHNFDSSGDGELVELDSPAGLKPENREEVTSSSMEHRTEVEKLRTELKQVAGISEIAKPGSPIDPSLTAHLQRLSQLIDGLQQTYQKTDKPQTEMRPDQLNAFLAHFDIKNRYEMMNPMEQTSSTITTTTSTTEAPKIKPRLPEPTSNKTRLQEHLSHHRLEPETKLMLSNAVPYSSHGTTGQGYANSQIVVNRPEGSVMFALPPNYGMSQEQGSYVSHQSHEYSDHEPKISEDTLKTVLELSKQMIAAQNLPKVLPNPGFNGAYYQPILQPVFMSPQGNPFQQYYGMPPPLNPHYMQHKKHSAGGGSSSNGYNKPSTTIIHNNVIPVHLSSTSSGEKEVLDTYGNSLGVYPSMDKHVTASQASGMEYMTTARPVTIATTASTYSAQYGSQSPFASDYTLTTPRPFEQQPSAATVATYYTPSPHLGEHNANRVYQPTESYPTMNIPRPMDMFPGQIDADRVSIRPNSQKIESMEMDEDMIKANYQSGSGIGNGNGNTLPHVLTYSSDMSQQLAPSNGYLEQSYSLQQPQHHHHPYMPRPRPTMSSSIYSDSDGNMEMSMFTSSPNLNPFKGGNVKYPGSTSPNGQLVNFNGNFISLDVFQKSILPLMTKSPSALNELGNVEVITCQAGVRQPNQTDCTRYFVCSKKDGKVLSYSCPPYTAFNKQTRICDAPTYAQCSNVIPAFNGYTIDSNRRLQMEAIKMLSEAKRRQEAALKAQSIASLIQQYGSAQKAQPGISSNVENDPLDSYVVSLPEVSLSTTTSRPTIIQSSSGVSSGGSSTPAKKRKYYCKEGDKIPDQTSISSYFVCYKNAQGQMKGHKMSCSKSLLFCPKTLMCTLASKCTD

Target ORF information:

RefSeq Version	NM_144381.3
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster uncharacterized protein (CG42296), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_144381.3

ORF Insert Sequence:

ATGAGGCAGC TGCTGGTTTA CGCGTTGGTC GCGGGCTTGT TTTACTTTTC CGAAGGCAAG 
CCGTGCCCCG AAAAGACACG CCCCCACAAA ACCCGCTGCG ACGCCTTCTA CAAGTGCCGG 
GAACTGCCCT CCAACTCGCA CGTTTGGATT CCGGTGAAGT GCAACGAGGG ATTGGTGTTC 
GAGTCCAGTT TGGGCAGCTG CGTTCTGCCT GGCGAGGATT GGGAGTGCAT CACCCCGAGT 
GAGATGAGCT CCACGCAGTC GCCACCTGGG AGGCCGGACG CGGACATACT GATAGTCAAC 
GACATGGACG AGGCGGGTCT GCTTTTGAGC GACTCCAGTC ACAAGGACGA TGGCACCGTG 
GAAATAATTC TAGACTCCAC ACTGAGCAGT GAGGAGAATG AGGTTAATGA GGAGGCGGCC 
AAGAGCAAGC CGCAGCCGGA GGAGGACTTC TCTTCCAATC ACAACTTCGA CTCGAGCGGC 
GATGGGGAGC TGGTGGAACT GGATTCCCCC GCTGGTCTGA AGCCCGAGAA CCGCGAGGAG 
GTGACTTCCA GCAGCATGGA GCACAGAACA GAGGTGGAAA AGCTAAGAAC GGAACTTAAA 
CAGGTGGCTG GTATCAGCGA AATAGCCAAG CCGGGATCGC CCATCGATCC CAGCCTGACT 
GCTCACCTGC AGAGATTGTC CCAACTGATT GATGGACTGC AGCAGACCTA CCAGAAGACA 
GATAAACCTC AGACGGAAAT GCGACCAGAC CAGTTGAATG CTTTTCTGGC GCACTTTGAC 
ATCAAGAACC GGTATGAGAT GATGAACCCC ATGGAGCAGA CCTCTTCCAC AATCACCACC 
ACCACCAGTA CCACAGAAGC ACCCAAAATA AAGCCAAGGC TACCGGAACC CACCTCGAAT 
AAGACCCGCC TGCAGGAGCA CCTGAGCCAC CATCGCCTGG AACCGGAGAC GAAACTAATG 
CTCAGCAATG CCGTGCCCTA CTCCTCGCAT GGAACCACCG GGCAGGGATA TGCCAACTCT 
CAGATAGTGG TGAATCGCCC CGAAGGCTCT GTGATGTTTG CCCTGCCGCC CAATTACGGA 
ATGAGCCAGG AACAGGGTTC GTATGTAAGC CACCAGAGTC ACGAGTACAG CGATCATGAG 
CCCAAGATAT CGGAGGACAC CTTGAAGACG GTTCTGGAGC TGTCCAAGCA AATGATCGCC 
GCACAAAACC TGCCCAAAGT GCTGCCCAAT CCGGGCTTCA ATGGTGCCTA TTACCAACCC 
ATTCTGCAGC CTGTTTTCAT GTCGCCCCAG GGCAATCCCT TCCAGCAGTA CTACGGCATG 
CCGCCTCCCT TAAATCCACA CTACATGCAG CACAAGAAGC ACTCCGCTGG AGGCGGTTCC 
TCTAGCAATG GCTATAACAA GCCCAGCACC ACCATTATTC ACAACAATGT GATACCTGTT 
CACCTATCCA GCACGAGTTC GGGGGAAAAA GAGGTGCTGG ACACCTATGG CAATAGTTTG 
GGGGTATATC CCAGCATGGA TAAACATGTG ACCGCCAGCC AGGCCAGTGG CATGGAGTAC 
ATGACCACAG CTCGGCCCGT TACGATCGCA ACTACTGCCA GCACCTACTC CGCACAGTAC 
GGATCCCAGT CCCCGTTCGC CAGTGACTAC ACCCTGACCA CTCCGCGACC CTTTGAGCAG 
CAACCTTCAG CCGCCACAGT GGCCACGTAC TATACTCCAA GTCCGCATTT GGGCGAGCAC 
AACGCGAATA GGGTATACCA ACCCACCGAA TCGTATCCCA CGATGAATAT ACCCAGACCC 
ATGGACATGT TTCCAGGACA AATCGATGCG GACAGGGTGA GCATTCGACC CAACTCGCAG 
AAAATCGAAA GCATGGAGAT GGACGAAGAT ATGATTAAGG CCAACTATCA AAGTGGCTCT 
GGTATTGGGA ATGGGAATGG GAACACTCTT CCTCACGTAC TGACCTACAG CAGCGACATG 
AGCCAGCAAT TAGCACCTTC GAATGGCTAT CTGGAGCAGA GCTATAGCCT CCAGCAGCCG 
CAGCACCACC ACCATCCATA TATGCCCAGG CCCAGACCCA CGATGAGCAG CAGTATCTAT 
AGTGACTCGG ATGGCAATAT GGAGATGAGC ATGTTCACCA GCAGTCCGAA TCTTAACCCA 
TTCAAGGGCG GCAACGTGAA GTACCCAGGA AGCACTTCGC CCAATGGCCA GCTGGTTAAC 
TTCAATGGCA ACTTCATCAG CCTGGATGTC TTCCAGAAAT CCATACTTCC CCTTATGACC 
AAGTCGCCAT CCGCTTTAAA TGAGCTGGGA AACGTGGAGG TCATCACATG CCAGGCGGGC 
GTAAGACAGC CAAATCAAAC TGACTGCACG CGATATTTCG TTTGCAGCAA GAAGGATGGC 
AAGGTCCTGT CCTACTCCTG TCCGCCTTAC ACGGCCTTCA ATAAGCAGAC CAGGATTTGC 
GATGCCCCCA CCTATGCACA GTGCAGCAAT GTTATACCTG CCTTCAATGG CTACACCATC 
GATAGCAATA GGAGGCTCCA GATGGAGGCC ATCAAGATGC TGAGTGAGGC CAAGAGGAGA 
CAGGAGGCTG CCTTAAAGGC CCAGAGCATA GCCAGTCTGA TCCAGCAATA CGGAAGCGCG 
CAAAAGGCGC AACCTGGCAT ATCGTCCAAC GTAGAGAATG ATCCCCTGGA CTCGTATGTG 
GTCAGCTTGC CAGAAGTCAG TCTGTCCACC ACCACCAGCA GACCCACCAT CATCCAGAGC 
AGCAGTGGTG TGAGTAGTGG TGGATCGTCG ACTCCCGCAA AGAAGAGAAA GTACTACTGC 
AAGGAGGGCG ATAAGATCCC GGATCAGACC TCCATTTCCA GCTACTTTGT GTGCTACAAG 
AACGCCCAGG GTCAAATGAA GGGCCACAAG ATGAGCTGCT CCAAGAGCCT GCTCTTCTGT 
CCCAAGACCC TCATGTGCAC CCTCGCCTCC AAGTGCACCG ACTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)
Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM,

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)
Crosby MA,Gramates LS,Dos Santos G,Matthews BB,St Pierre SE,Zhou P,Schroeder AJ,Falls K,Emmert DB,Russo SM,Gelbart WM,

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)
Hoskins RA,Carlson JW,Kennedy C,Acevedo D,Evans-Holm M,Frise E,Wan KH,Park S,Mendez-Lago M,Rossi F,Villasante A,Dimitri P,Karpen GH,Celniker SE

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)
Smith CD,Shu S,Mungall CJ,Karpen GH

Combined evidence annotation of transposable elements in genome sequences.
PLoS computational biology1(2)166-75(2005 Jul)
Quesneville H,Bergman CM,Andrieu O,Autard D,Nouaud D,Ashburner M,Anxolabehere D

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CG42296 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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