SoxN cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene
Clones
gRNAs

Summary

Gene Symbol	SoxN
Entrez Gene ID	44275
Full Name	SoxNeuro
Synonyms	CG18024,DM64,Dmel\CG18024,SOX29F,SOXB1,Sox B1,Sry-rDM64,soxN
General protein information	Preferred Names SoxNeuro Names CG18024 gene product from transcript CG18024-RA CG18024-PA CG18024-PB Sox-neuro SoxN-PA SoxN-PB Sry-related DM64 soxneuro
Gene Type	protein-coding
Organism	Drosophila melanogaster(fruit fly)
Genome	Chromosome: 2L Map Location: 29F2-29F2

mRNA and Protein(s)

mRNA	Protein	Name
NM_079996.3	NP_524735.1	SoxNeuro, isoform A
NM_001273340.2	NP_001260269.1	SoxNeuro, isoform B

Pathways from BioSystems

Homologies

Drosophila melanogaster (fruit fly)	SoxN	NP_524735.1
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP009957	XP_319093.4

Gene Ontology
Bibliography

Related articles in PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
Matthews BB, Dos Santos G, Crosby MA, Emmert DB, St Pierre SE, Gramates LS, Zhou P, Schroeder AJ, Falls K, Strelets V, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
Crosby MA, Gramates LS, Dos Santos G, Matthews BB, St Pierre SE, Zhou P, Schroeder AJ, Falls K, Emmert DB, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Hoskins RA, Carlson JW, Kennedy C, Acevedo D, Evans-Holm M, Frise E, Wan KH, Park S, Mendez-Lago M, Rossi F, Villasante A, Dimitri P, Karpen GH, Celniker SE
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Smith CD, Shu S, Mungall CJ, Karpen GH
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)

Combined evidence annotation of transposable elements in genome sequences.
Quesneville H, Bergman CM, Andrieu O, Autard D, Nouaud D, Ashburner M, Anxolabehere D
PLoS computational biology1(2)166-75(2005 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

Co-expressing ectopic SoxN with svb rescued diverse denticle morphologies. Conversely, removing SoxN activity eliminated the residual denticles found in svb mutant embryos. Furthermore, several known Svb target genes are also activated by SoxN, and we have discovered two novel target genes of SoxN that are expressed in denticle-producing cells and that are regulated independently of Svb.
Title: SoxNeuro and Shavenbaby act cooperatively to shape denticles in the embryonic epidermis of

Functionsl analysis places SoxN at the heart of the regulatory networks driving neural specification and differentiation.
Title: SoxNeuro orchestrates central nervous system specification and differentiation in Drosophila and is only partially redundant with Dichaete.

SoxN is necessary and sufficient to cell-autonomously direct the expression of svb.
Title: The Drosophila HMG-domain proteins SoxNeuro and Dichaete direct trichome formation via the activation of shavenbaby and the restriction of Wingless pathway activity.

SoxN repression is potentiated by adding ectopic Tcf, suggesting that SoxN interacts with the repressor form of Tcf to influence Wg/Wnt target gene transcription.
Title: The HMG-box transcription factor SoxNeuro acts with Tcf to control Wg/Wnt signaling activity.

SoxN is directly involved in axonal patterning
Title: Chromatin immunoprecipitation reveals a novel role for the Drosophila SoxNeuro transcription factor in axonal patterning.

The following SoxN gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the SoxN cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OFa15200	NM_001273340.2 Latest version!	Drosophila melanogaster SoxNeuro (SoxN), transcript variant B, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	TBD	$426.30 $609.00
OFa16426	NM_079996.3 Latest version!	Drosophila melanogaster SoxNeuro (SoxN), transcript variant A, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	TBD	$342.30 $489.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

SoxN ( NM_001273340.2 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_001260269.1 Drosophila melanogaster SoxNeuro (SoxN), transcript variant B, mRNA.

Price & Availability↑

CloneID	OFa15200
Clone ID Related Accession (Same CDS sequence)	NM_001273340.2
Accession Version	NM_001273340.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2286bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	SoxNeuro, isoform B
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033779). On Jul 15, 2014 this sequence version replaced NM_001273340.1. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGCTGACCA TGGAATCGGA TATGAAAGGC AGCCTGCTGC ATGCCACCAT GCCGCCGCAT 
CACACAAGTG CCGCGTTGCA CGGACATGCG GCATCGCCGT ACTCCGCCCT AGCTCCCCTT 
ATGAACCTGG GCCAGTCGCA CCTGACCCAC TCGCAGCTGA GCCATCACAA CCACCATCAT 
CACCACATGA GCGCCCATAT CGCGGCCAGC CAGAGTCCCA ATCCGCTGAG CTCGCTGCAG 
TCCTCGATGG CGAACACCCT CAATGGCAGC CAGGTGGGGC AGCAGCAGCA GCAACAGCAG 
CAGCAGCAGA GCTCCCCGCT GCACAGCTCC AGCGAATTGA GTCCCACCCA GAGCAGCATC 
GGAAGCCATC ACATGACATC GCCGGTCAGC CACCAGCAGC ACACGCAACA GCAGCAGCAC 
GGGCAGCAGC AGCATCTGGG CGCGGGATCT GCATTGAGCA GCCTAACTGG AGGATCCAGC 
AACAACAACA ACAACAGCGC CACGGCCAAC AAGAACCAAC AGCACGCGGA TCGTGTGAAG 
CGGCCTATGA ATGCGTTCAT GGTTTGGTCA CGGGGCCAGC GGAGGAAGAT GGCCTCGGAC 
AACCCCAAGA TGCACAACTC GGAGATCTCG AAGCGACTGG GCGCCCAGTG GAAGGACCTC 
TCGGAATCGG AGAAGCGACC GTTCATCGAC GAGGCCAAGC GCCTGAGGGC GGTGCACATG 
AAGGAGCATC CGGACTACAA GTACCGGCCG CGCCGCAAGA CTAAAACGCT GACCAAGACC 
AAGGAGAAGT ACCCAATGGG CGGCCTGATG CCCGGACAGA CGGTGGGCGG CGGAGCACCG 
GGTGAGCCGG TGACGCCCAC GCGGGTGCAA GGTCAGCCTG GCCAGAACCA GTCGCTAAAC 
GGTAGTGGAG GCAGTGCAGC AGCGGCAGCG GCGGCGGCAG CAGCGGCAGC GCAACAGGCG 
CGCCAGGATA TGTACCAGAT GAACGCGCCC AATGGATACA TGCCCAATGG CTACATGATG 
CACGCAGATC CGGCCGGAGC GGCAGCCTAT CAGACCTCCT ACATGGGCCA GCACTACGCG 
GCGCAGCGGT ACGACATGGG ACACATGTAC AACAACGGGT ATGCGATGTA CCAGACGGTG 
TCCGGCGGAC AGACATCGCC GTACGGCAGC AGTCTCCAGC AGCCCGGATC ACCGTCGCCG 
TATGGCGGCA GTAGCTTGCA GCAGCAGCCC GGCAGTCCGA CTCCGTACGG CGGAGGTGGA 
GGCGGTGGCG GTCAGGTTTC CTGCCAGAGC CACAGCCCCA GCGACTCGAG CATCAAGTCC 
GAACCGGTGT CGCCCAGTCC CAGTGCCATA GCGCTCAACA ACAACAACAA CATCAACAAC 
AATCACATCA TGAAGCGGGA ATACAGCTCT GCAGCGGCGG CAGCAGCAGC AGCAGCAGCG 
GCAGCAGCCG CCGGCGGCGG CGAGCTGAAT CACCTGATGA ATATGTACCA TCTGCCGGAT 
GAGCAGCGCC ACCTGCTGCA CTATCAGACT GACTCGCCCG ATCTGCAGCA GCAGCACCAG 
TCGATGCAAC AGCAGCAGCA GCACCTCCCG CAGCAACACC TTTCGCAGCA GCACCAACAG 
ATCCCGCAGC AACACCATAC CATGCAGCAG CAGCAGCAGC AACACCACCT GCAGCATCAG 
CAATCGCTGA GGGCGATGGC GCCGCTGGCA CACATGTGAG AAATGGCCAG CGCCTATGGA 
GCAGCAGGCT CCAGTGTGAG CGTTTCGCCT CCACTGCCGC CGTACATGCC GACGGCCCCG 
CAGCAACAGC AGCAGCAGCA ACAACAGCAG CAACAGTTGC TCAACGGACG GCCTAGTCCG 
ACGGCATCGG GGTCGTCGGG CGGCCGCTCC TCGGCGCATT CCAGTGGCCA TACCGCCGCG 
CATTCACCCG CCTTGGCAGC CGCCTACCAG CTGACCCCCT CCGCTGCCAC CTCCTCCGCC 
ACTTCGGCTG CTGCTGCGGC GGCAACTGCT GCTGCCGTTG CTGCTGCTGC GGCTGCAGGC 
AGCTCCTTTG CCGCCTCGGC CAGCATGCTG GACATGCAAC AGCAGCATCT CGAGGAGCAG 
CAGCAGCACC ACCACCTGCA CTACCAGCAG CAGCAACAGC AACACTACCA GCAGCAGCAG 
CAGCAACAGC AGCAGCTGCA GCACCTCCCG CAGCAGCAGC AACACCAGCT GTACCATCAC 
TATCATCCTG GCCACGAGGC AGCGGTGGCT GCCAGTGCTG GCCTCCTGGA TATATCCACA 
TTGTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001260269.1
CDS	850..3135
Translation	MLTMESDMKGSLLHATMPPHHTSAALHGHAASPYSALAPLMNLGQSHLTHSQLSHHNHHHHHMSAHIAASQSPNPLSSLQSSMANTLNGSQVGQQQQQQQQQQSSPLHSSSELSPTQSSIGSHHMTSPVSHQQHTQQQQHGQQQHLGAGSALSSLTGGSSNNNNNSATANKNQQHADRVKRPMNAFMVWSRGQRRKMASDNPKMHNSEISKRLGAQWKDLSESEKRPFIDEAKRLRAVHMKEHPDYKYRPRRKTKTLTKTKEKYPMGGLMPGQTVGGGAPGEPVTPTRVQGQPGQNQSLNGSGGSAAAAAAAAAAAAQQARQDMYQMNAPNGYMPNGYMMHADPAGAAAYQTSYMGQHYAAQRYDMGHMYNNGYAMYQTVSGGQTSPYGSSLQQPGSPSPYGGSSLQQQPGSPTPYGGGGGGGGQVSCQSHSPSDSSIKSEPVSPSPSAIALNNNNNINNNHIMKREYSSAAAAAAAAAAAAAAGGGELNHLMNMYHLPDEQRHLLHYQTDSPDLQQQHQSMQQQQQHLPQQHLSQQHQQIPQQHHTMQQQQQQHHLQHQQSLRAMAPLAHM*EMASAYGAAGSSVSVSPPLPPYMPTAPQQQQQQQQQQQQLLNGRPSPTASGSSGGRSSAHSSGHTAAHSPALAAAYQLTPSAATSSATSAAAAAATAAAVAAAAAAGSSFAASASMLDMQQQHLEEQQQHHHLHYQQQQQQHYQQQQQQQQQLQHLPQQQQHQLYHHYHPGHEAAVAASAGLLDISTL

Target ORF information:

RefSeq Version	NM_001273340.2
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster SoxNeuro (SoxN), transcript variant B, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001273340.2

ORF Insert Sequence:

ATGCTGACCA TGGAATCGGA TATGAAAGGC AGCCTGCTGC ATGCCACCAT GCCGCCGCAT 
CACACAAGTG CCGCGTTGCA CGGACATGCG GCATCGCCGT ACTCCGCCCT AGCTCCCCTT 
ATGAACCTGG GCCAGTCGCA CCTGACCCAC TCGCAGCTGA GCCATCACAA CCACCATCAT 
CACCACATGA GCGCCCATAT CGCGGCCAGC CAGAGTCCCA ATCCGCTGAG CTCGCTGCAG 
TCCTCGATGG CGAACACCCT CAATGGCAGC CAGGTGGGGC AGCAGCAGCA GCAACAGCAG 
CAGCAGCAGA GCTCCCCGCT GCACAGCTCC AGCGAATTGA GTCCCACCCA GAGCAGCATC 
GGAAGCCATC ACATGACATC GCCGGTCAGC CACCAGCAGC ACACGCAACA GCAGCAGCAC 
GGGCAGCAGC AGCATCTGGG CGCGGGATCT GCATTGAGCA GCCTAACTGG AGGATCCAGC 
AACAACAACA ACAACAGCGC CACGGCCAAC AAGAACCAAC AGCACGCGGA TCGTGTGAAG 
CGGCCTATGA ATGCGTTCAT GGTTTGGTCA CGGGGCCAGC GGAGGAAGAT GGCCTCGGAC 
AACCCCAAGA TGCACAACTC GGAGATCTCG AAGCGACTGG GCGCCCAGTG GAAGGACCTC 
TCGGAATCGG AGAAGCGACC GTTCATCGAC GAGGCCAAGC GCCTGAGGGC GGTGCACATG 
AAGGAGCATC CGGACTACAA GTACCGGCCG CGCCGCAAGA CTAAAACGCT GACCAAGACC 
AAGGAGAAGT ACCCAATGGG CGGCCTGATG CCCGGACAGA CGGTGGGCGG CGGAGCACCG 
GGTGAGCCGG TGACGCCCAC GCGGGTGCAA GGTCAGCCTG GCCAGAACCA GTCGCTAAAC 
GGTAGTGGAG GCAGTGCAGC AGCGGCAGCG GCGGCGGCAG CAGCGGCAGC GCAACAGGCG 
CGCCAGGATA TGTACCAGAT GAACGCGCCC AATGGATACA TGCCCAATGG CTACATGATG 
CACGCAGATC CGGCCGGAGC GGCAGCCTAT CAGACCTCCT ACATGGGCCA GCACTACGCG 
GCGCAGCGGT ACGACATGGG ACACATGTAC AACAACGGGT ATGCGATGTA CCAGACGGTG 
TCCGGCGGAC AGACATCGCC GTACGGCAGC AGTCTCCAGC AGCCCGGATC ACCGTCGCCG 
TATGGCGGCA GTAGCTTGCA GCAGCAGCCC GGCAGTCCGA CTCCGTACGG CGGAGGTGGA 
GGCGGTGGCG GTCAGGTTTC CTGCCAGAGC CACAGCCCCA GCGACTCGAG CATCAAGTCC 
GAACCGGTGT CGCCCAGTCC CAGTGCCATA GCGCTCAACA ACAACAACAA CATCAACAAC 
AATCACATCA TGAAGCGGGA ATACAGCTCT GCAGCGGCGG CAGCAGCAGC AGCAGCAGCG 
GCAGCAGCCG CCGGCGGCGG CGAGCTGAAT CACCTGATGA ATATGTACCA TCTGCCGGAT 
GAGCAGCGCC ACCTGCTGCA CTATCAGACT GACTCGCCCG ATCTGCAGCA GCAGCACCAG 
TCGATGCAAC AGCAGCAGCA GCACCTCCCG CAGCAACACC TTTCGCAGCA GCACCAACAG 
ATCCCGCAGC AACACCATAC CATGCAGCAG CAGCAGCAGC AACACCACCT GCAGCATCAG 
CAATCGCTGA GGGCGATGGC GCCGCTGGCA CACATGTGAG AAATGGCCAG CGCCTATGGA 
GCAGCAGGCT CCAGTGTGAG CGTTTCGCCT CCACTGCCGC CGTACATGCC GACGGCCCCG 
CAGCAACAGC AGCAGCAGCA ACAACAGCAG CAACAGTTGC TCAACGGACG GCCTAGTCCG 
ACGGCATCGG GGTCGTCGGG CGGCCGCTCC TCGGCGCATT CCAGTGGCCA TACCGCCGCG 
CATTCACCCG CCTTGGCAGC CGCCTACCAG CTGACCCCCT CCGCTGCCAC CTCCTCCGCC 
ACTTCGGCTG CTGCTGCGGC GGCAACTGCT GCTGCCGTTG CTGCTGCTGC GGCTGCAGGC 
AGCTCCTTTG CCGCCTCGGC CAGCATGCTG GACATGCAAC AGCAGCATCT CGAGGAGCAG 
CAGCAGCACC ACCACCTGCA CTACCAGCAG CAGCAACAGC AACACTACCA GCAGCAGCAG 
CAGCAACAGC AGCAGCTGCA GCACCTCCCG CAGCAGCAGC AACACCAGCT GTACCATCAC 
TATCATCCTG GCCACGAGGC AGCGGTGGCT GCCAGTGCTG GCCTCCTGGA TATATCCACA 
TTGTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

SoxN ( NM_079996.3 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_524735.1 Drosophila melanogaster SoxNeuro (SoxN), transcript variant A, mRNA.

Price & Availability↑

CloneID	OFa16426
Clone ID Related Accession (Same CDS sequence)	NM_079996.3
Accession Version	NM_079996.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1719bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	SoxNeuro, isoform A
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033779). On Jul 15, 2014 this sequence version replaced NM_079996.2. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGCTGACCA TGGAATCGGA TATGAAAGGC AGCCTGCTGC ATGCCACCAT GCCGCCGCAT 
CACACAAGTG CCGCGTTGCA CGGACATGCG GCATCGCCGT ACTCCGCCCT AGCTCCCCTT 
ATGAACCTGG GCCAGTCGCA CCTGACCCAC TCGCAGCTGA GCCATCACAA CCACCATCAT 
CACCACATGA GCGCCCATAT CGCGGCCAGC CAGAGTCCCA ATCCGCTGAG CTCGCTGCAG 
TCCTCGATGG CGAACACCCT CAATGGCAGC CAGGTGGGGC AGCAGCAGCA GCAACAGCAG 
CAGCAGCAGA GCTCCCCGCT GCACAGCTCC AGCGAATTGA GTCCCACCCA GAGCAGCATC 
GGAAGCCATC ACATGACATC GCCGGTCAGC CACCAGCAGC ACACGCAACA GCAGCAGCAC 
GGGCAGCAGC AGCATCTGGG CGCGGGATCT GCATTGAGCA GCCTAACTGG AGGATCCAGC 
AACAACAACA ACAACAGCGC CACGGCCAAC AAGAACCAAC AGCACGCGGA TCGTGTGAAG 
CGGCCTATGA ATGCGTTCAT GGTTTGGTCA CGGGGCCAGC GGAGGAAGAT GGCCTCGGAC 
AACCCCAAGA TGCACAACTC GGAGATCTCG AAGCGACTGG GCGCCCAGTG GAAGGACCTC 
TCGGAATCGG AGAAGCGACC GTTCATCGAC GAGGCCAAGC GCCTGAGGGC GGTGCACATG 
AAGGAGCATC CGGACTACAA GTACCGGCCG CGCCGCAAGA CTAAAACGCT GACCAAGACC 
AAGGAGAAGT ACCCAATGGG CGGCCTGATG CCCGGACAGA CGGTGGGCGG CGGAGCACCG 
GGTGAGCCGG TGACGCCCAC GCGGGTGCAA GGTCAGCCTG GCCAGAACCA GTCGCTAAAC 
GGTAGTGGAG GCAGTGCAGC AGCGGCAGCG GCGGCGGCAG CAGCGGCAGC GCAACAGGCG 
CGCCAGGATA TGTACCAGAT GAACGCGCCC AATGGATACA TGCCCAATGG CTACATGATG 
CACGCAGATC CGGCCGGAGC GGCAGCCTAT CAGACCTCCT ACATGGGCCA GCACTACGCG 
GCGCAGCGGT ACGACATGGG ACACATGTAC AACAACGGGT ATGCGATGTA CCAGACGGTG 
TCCGGCGGAC AGACATCGCC GTACGGCAGC AGTCTCCAGC AGCCCGGATC ACCGTCGCCG 
TATGGCGGCA GTAGCTTGCA GCAGCAGCCC GGCAGTCCGA CTCCGTACGG CGGAGGTGGA 
GGCGGTGGCG GTCAGGTTTC CTGCCAGAGC CACAGCCCCA GCGACTCGAG CATCAAGTCC 
GAACCGGTGT CGCCCAGTCC CAGTGCCATA GCGCTCAACA ACAACAACAA CATCAACAAC 
AATCACATCA TGAAGCGGGA ATACAGCTCT GCAGCGGCGG CAGCAGCAGC AGCAGCAGCG 
GCAGCAGCCG CCGGCGGCGG CGAGCTGAAT CACCTGATGA ATATGTACCA TCTGCCGGAT 
GAGCAGCGCC ACCTGCTGCA CTATCAGACT GACTCGCCCG ATCTGCAGCA GCAGCACCAG 
TCGATGCAAC AGCAGCAGCA GCACCTCCCG CAGCAACACC TTTCGCAGCA GCACCAACAG 
ATCCCGCAGC AACACCATAC CATGCAGCAG CAGCAGCAGC AACACCACCT GCAGCATCAG 
CAATCGCTGA GGGCGATGGC GCCGCTGGCA CACATGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_524735.1
CDS	850..2568
Translation	MLTMESDMKGSLLHATMPPHHTSAALHGHAASPYSALAPLMNLGQSHLTHSQLSHHNHHHHHMSAHIAASQSPNPLSSLQSSMANTLNGSQVGQQQQQQQQQQSSPLHSSSELSPTQSSIGSHHMTSPVSHQQHTQQQQHGQQQHLGAGSALSSLTGGSSNNNNNSATANKNQQHADRVKRPMNAFMVWSRGQRRKMASDNPKMHNSEISKRLGAQWKDLSESEKRPFIDEAKRLRAVHMKEHPDYKYRPRRKTKTLTKTKEKYPMGGLMPGQTVGGGAPGEPVTPTRVQGQPGQNQSLNGSGGSAAAAAAAAAAAAQQARQDMYQMNAPNGYMPNGYMMHADPAGAAAYQTSYMGQHYAAQRYDMGHMYNNGYAMYQTVSGGQTSPYGSSLQQPGSPSPYGGSSLQQQPGSPTPYGGGGGGGGQVSCQSHSPSDSSIKSEPVSPSPSAIALNNNNNINNNHIMKREYSSAAAAAAAAAAAAAAGGGELNHLMNMYHLPDEQRHLLHYQTDSPDLQQQHQSMQQQQQHLPQQHLSQQHQQIPQQHHTMQQQQQQHHLQHQQSLRAMAPLAHM

Target ORF information:

RefSeq Version	NM_079996.3
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster SoxNeuro (SoxN), transcript variant A, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_079996.3

ORF Insert Sequence:

ATGCTGACCA TGGAATCGGA TATGAAAGGC AGCCTGCTGC ATGCCACCAT GCCGCCGCAT 
CACACAAGTG CCGCGTTGCA CGGACATGCG GCATCGCCGT ACTCCGCCCT AGCTCCCCTT 
ATGAACCTGG GCCAGTCGCA CCTGACCCAC TCGCAGCTGA GCCATCACAA CCACCATCAT 
CACCACATGA GCGCCCATAT CGCGGCCAGC CAGAGTCCCA ATCCGCTGAG CTCGCTGCAG 
TCCTCGATGG CGAACACCCT CAATGGCAGC CAGGTGGGGC AGCAGCAGCA GCAACAGCAG 
CAGCAGCAGA GCTCCCCGCT GCACAGCTCC AGCGAATTGA GTCCCACCCA GAGCAGCATC 
GGAAGCCATC ACATGACATC GCCGGTCAGC CACCAGCAGC ACACGCAACA GCAGCAGCAC 
GGGCAGCAGC AGCATCTGGG CGCGGGATCT GCATTGAGCA GCCTAACTGG AGGATCCAGC 
AACAACAACA ACAACAGCGC CACGGCCAAC AAGAACCAAC AGCACGCGGA TCGTGTGAAG 
CGGCCTATGA ATGCGTTCAT GGTTTGGTCA CGGGGCCAGC GGAGGAAGAT GGCCTCGGAC 
AACCCCAAGA TGCACAACTC GGAGATCTCG AAGCGACTGG GCGCCCAGTG GAAGGACCTC 
TCGGAATCGG AGAAGCGACC GTTCATCGAC GAGGCCAAGC GCCTGAGGGC GGTGCACATG 
AAGGAGCATC CGGACTACAA GTACCGGCCG CGCCGCAAGA CTAAAACGCT GACCAAGACC 
AAGGAGAAGT ACCCAATGGG CGGCCTGATG CCCGGACAGA CGGTGGGCGG CGGAGCACCG 
GGTGAGCCGG TGACGCCCAC GCGGGTGCAA GGTCAGCCTG GCCAGAACCA GTCGCTAAAC 
GGTAGTGGAG GCAGTGCAGC AGCGGCAGCG GCGGCGGCAG CAGCGGCAGC GCAACAGGCG 
CGCCAGGATA TGTACCAGAT GAACGCGCCC AATGGATACA TGCCCAATGG CTACATGATG 
CACGCAGATC CGGCCGGAGC GGCAGCCTAT CAGACCTCCT ACATGGGCCA GCACTACGCG 
GCGCAGCGGT ACGACATGGG ACACATGTAC AACAACGGGT ATGCGATGTA CCAGACGGTG 
TCCGGCGGAC AGACATCGCC GTACGGCAGC AGTCTCCAGC AGCCCGGATC ACCGTCGCCG 
TATGGCGGCA GTAGCTTGCA GCAGCAGCCC GGCAGTCCGA CTCCGTACGG CGGAGGTGGA 
GGCGGTGGCG GTCAGGTTTC CTGCCAGAGC CACAGCCCCA GCGACTCGAG CATCAAGTCC 
GAACCGGTGT CGCCCAGTCC CAGTGCCATA GCGCTCAACA ACAACAACAA CATCAACAAC 
AATCACATCA TGAAGCGGGA ATACAGCTCT GCAGCGGCGG CAGCAGCAGC AGCAGCAGCG 
GCAGCAGCCG CCGGCGGCGG CGAGCTGAAT CACCTGATGA ATATGTACCA TCTGCCGGAT 
GAGCAGCGCC ACCTGCTGCA CTATCAGACT GACTCGCCCG ATCTGCAGCA GCAGCACCAG 
TCGATGCAAC AGCAGCAGCA GCACCTCCCG CAGCAACACC TTTCGCAGCA GCACCAACAG 
ATCCCGCAGC AACACCATAC CATGCAGCAG CAGCAGCAGC AACACCACCT GCAGCATCAG 
CAATCGCTGA GGGCGATGGC GCCGCTGGCA CACATGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)
Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM,

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)
Crosby MA,Gramates LS,Dos Santos G,Matthews BB,St Pierre SE,Zhou P,Schroeder AJ,Falls K,Emmert DB,Russo SM,Gelbart WM,

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)
Hoskins RA,Carlson JW,Kennedy C,Acevedo D,Evans-Holm M,Frise E,Wan KH,Park S,Mendez-Lago M,Rossi F,Villasante A,Dimitri P,Karpen GH,Celniker SE

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)
Smith CD,Shu S,Mungall CJ,Karpen GH

Combined evidence annotation of transposable elements in genome sequences.
PLoS computational biology1(2)166-75(2005 Jul)
Quesneville H,Bergman CM,Andrieu O,Autard D,Nouaud D,Ashburner M,Anxolabehere D

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SoxN cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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