akirin cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene
Clones
gRNAs

Summary

Gene Symbol	akirin
Entrez Gene ID	38821
Full Name	CG8580 gene product from transcript CG8580-RD
Synonyms	Akirin,CG8580,DmAkirin,Dmel\CG8580,EP(3)0906,anon-WO0118547.397,bhr
Gene Type	protein-coding
Organism	Drosophila melanogaster(fruit fly)
Genome	Chromosome: 3L Map Location: 65F7-65F7

mRNA and Protein(s)

mRNA	Protein	Name
NM_168211.3	NP_729249.1	akirin, isoform B
NM_001202130.2	NP_001189059.1	akirin, isoform D
NM_139856.4	NP_648113.1	akirin, isoform A
NM_001202129.2	NP_001189058.1	akirin, isoform C
NM_001202131.2	NP_001189060.1	akirin, isoform E
NM_001274582.1	NP_001261511.1	akirin, isoform F

Pathways from BioSystems

Homologies

	LOC700914	XP_001089230.1
Gallus gallus (chicken)	AKIRIN2	NP_001180524.1
Danio rerio (zebrafish)	akirin2	NP_998459.2
Canis lupus familiaris (dog)	AKIRIN2	XP_542340.3
Drosophila melanogaster (fruit fly)	akirin	NP_729249.1
Xenopus tropicalis (tropical clawed frog)	akirin2	NP_988914.1
Bos taurus (cattle)	AKIRIN2	NP_001103557.1
Mus musculus (house mouse)	Akirin2	NP_001007590.2
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP006809	XP_308938.4
Homo sapiens (human)	AKIRIN2	NP_060534.1
Pan troglodytes (chimpanzee)	AKIRIN2	NP_001238836.1
Rattus norvegicus (Norway rat)	Akirin2	NP_001035003.1

Gene Ontology
Bibliography

Related articles in PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
Matthews BB, Dos Santos G, Crosby MA, Emmert DB, St Pierre SE, Gramates LS, Zhou P, Schroeder AJ, Falls K, Strelets V, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
Crosby MA, Gramates LS, Dos Santos G, Matthews BB, St Pierre SE, Zhou P, Schroeder AJ, Falls K, Emmert DB, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Hoskins RA, Carlson JW, Kennedy C, Acevedo D, Evans-Holm M, Frise E, Wan KH, Park S, Mendez-Lago M, Rossi F, Villasante A, Dimitri P, Karpen GH, Celniker SE
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Smith CD, Shu S, Mungall CJ, Karpen GH
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)

Combined evidence annotation of transposable elements in genome sequences.
Quesneville H, Bergman CM, Andrieu O, Autard D, Nouaud D, Ashburner M, Anxolabehere D
PLoS computational biology1(2)166-75(2005 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

Akirin orchestrates NF-kappaB transcriptional selectivity through the recruitment of the Osa-containing-SWI/SNF-like Brahma complex (BAP).
Title: Akirin specifies NF-?B selectivity of Drosophila innate immune response via chromatin remodeling.

Our studies identify Akirin as a nuclear factor that genetically interacts with the BRM complex and is required for optimal expression of the Twist-dependent Dmef2 enhancer
Title: Akirin links twist-regulated transcription with the Brahma chromatin remodeling complex during embryogenesis.

The following akirin gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the akirin cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)
OFa17794	NM_001202129.2 Latest version!	Drosophila melanogaster akirin, transcript variant C (akirin), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$174.30 $249.00
OFa17794	NM_139856.4 Latest version!	Drosophila melanogaster akirin, transcript variant A (akirin), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$174.30 $249.00
OFa17794	NM_001202131.2 Latest version!	Drosophila melanogaster akirin, transcript variant E (akirin), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$174.30 $249.00
OFa17794	NM_001202130.2 Latest version!	Drosophila melanogaster akirin, transcript variant D (akirin), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$174.30 $249.00
OFa17794	NM_168211.3 Latest version!	Drosophila melanogaster akirin, transcript variant B (akirin), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$174.30 $249.00
OFa17794	NM_001274582.1 Latest version!	Drosophila melanogaster akirin, transcript variant F (akirin), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$174.30 $249.00

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
1 Clone	30% OFF
2-4 Clone	40% OFF
5 or more Clone	50% OFF
All Other ORF Clones
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*Business Day

** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

akirin ( NM_168211.3 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_729249.1 Drosophila melanogaster akirin, transcript variant B (akirin), mRNA.

Price & Availability↑

CloneID	OFa17794
Clone ID Related Accession (Same CDS sequence)	NM_168211.3 , NM_001202130.2 , NM_139856.4 , NM_001202129.2 , NM_001202131.2 , NM_001274582.1
Accession Version	NM_168211.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 606bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	akirin, isoform B
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_037436). On Jan 16, 2013 this sequence version replaced NM_168211.2. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGGCCTGTG CAACCCTGAA ACGAGCCCTA GACTGGGAGT CGATGAACCA GCGGCCTCCG 
AAGCGCCGGC GTTGCAATCC CTTTGGCCAG GCTGGGAGCA ATGCAGGTCC AGCGTCGCCA 
TCCCGCGACG GTCCCAGCAC CTCGGCTGGT CTGCCCCACA CGCCCAGCAA CCGATTCGCC 
AAGGATAGCA CCGAACCTAG TCCGTTCAGT GAGTCGTCGC TGGCCAAAAT GTCACCAGAC 
AAAATGGCCG AGAGCTTGTG CAATGAGATC AAGAGACTGC ACAAGCGCAA ACAGCTGCCG 
ATCACTTCGT CGGCCTTGGA ACGCATGCAG GATTCGGAGT CCAGCGGATC GGAGATGGGT 
CCAGAGAGTC CGCGCCGCCC GGACAGTCCA CAGAACCTGA TGCGCCACGG CGAAAAGGCC 
CTGTTCACGT TCAAGCAGGT GCAGCTCATT TGCGAGAGCA TGATCAAGGA GCGCGAGAAT 
CAGCTAAGGG AGCGCTACGA GTCCGTGCTG ACCACCAAGC TGGCCGAGCA GTACGATGCC 
TTTGTCAAGT TCACATATGA TCAGATACAG CGTCGCTACG AGGCAGCGCC TAGCTACCTG 
TCGTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_729249.1
CDS	355..960
Translation	MACATLKRALDWESMNQRPPKRRRCNPFGQAGSNAGPASPSRDGPSTSAGLPHTPSNRFAKDSTEPSPFSESSLAKMSPDKMAESLCNEIKRLHKRKQLPITSSALERMQDSESSGSEMGPESPRRPDSPQNLMRHGEKALFTFKQVQLICESMIKERENQLRERYESVLTTKLAEQYDAFVKFTYDQIQRRYEAAPSYLS

Target ORF information:

RefSeq Version	NM_168211.3
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster akirin, transcript variant B (akirin), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_168211.3

ORF Insert Sequence:

ATGGCCTGTG CAACCCTGAA ACGAGCCCTA GACTGGGAGT CGATGAACCA GCGGCCTCCG 
AAGCGCCGGC GTTGCAATCC CTTTGGCCAG GCTGGGAGCA ATGCAGGTCC AGCGTCGCCA 
TCCCGCGACG GTCCCAGCAC CTCGGCTGGT CTGCCCCACA CGCCCAGCAA CCGATTCGCC 
AAGGATAGCA CCGAACCTAG TCCGTTCAGT GAGTCGTCGC TGGCCAAAAT GTCACCAGAC 
AAAATGGCCG AGAGCTTGTG CAATGAGATC AAGAGACTGC ACAAGCGCAA ACAGCTGCCG 
ATCACTTCGT CGGCCTTGGA ACGCATGCAG GATTCGGAGT CCAGCGGATC GGAGATGGGT 
CCAGAGAGTC CGCGCCGCCC GGACAGTCCA CAGAACCTGA TGCGCCACGG CGAAAAGGCC 
CTGTTCACGT TCAAGCAGGT GCAGCTCATT TGCGAGAGCA TGATCAAGGA GCGCGAGAAT 
CAGCTAAGGG AGCGCTACGA GTCCGTGCTG ACCACCAAGC TGGCCGAGCA GTACGATGCC 
TTTGTCAAGT TCACATATGA TCAGATACAG CGTCGCTACG AGGCAGCGCC TAGCTACCTG 
TCGTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

akirin ( NM_001202130.2 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_001189059.1 Drosophila melanogaster akirin, transcript variant D (akirin), mRNA.

Price & Availability↑

CloneID	OFa17794
Clone ID Related Accession (Same CDS sequence)	NM_168211.3 , NM_001202130.2 , NM_139856.4 , NM_001202129.2 , NM_001202131.2 , NM_001274582.1
Accession Version	NM_001202130.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 606bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	akirin, isoform D
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_037436). On Jan 16, 2013 this sequence version replaced NM_001202130.1. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGGCCTGTG CAACCCTGAA ACGAGCCCTA GACTGGGAGT CGATGAACCA GCGGCCTCCG 
AAGCGCCGGC GTTGCAATCC CTTTGGCCAG GCTGGGAGCA ATGCAGGTCC AGCGTCGCCA 
TCCCGCGACG GTCCCAGCAC CTCGGCTGGT CTGCCCCACA CGCCCAGCAA CCGATTCGCC 
AAGGATAGCA CCGAACCTAG TCCGTTCAGT GAGTCGTCGC TGGCCAAAAT GTCACCAGAC 
AAAATGGCCG AGAGCTTGTG CAATGAGATC AAGAGACTGC ACAAGCGCAA ACAGCTGCCG 
ATCACTTCGT CGGCCTTGGA ACGCATGCAG GATTCGGAGT CCAGCGGATC GGAGATGGGT 
CCAGAGAGTC CGCGCCGCCC GGACAGTCCA CAGAACCTGA TGCGCCACGG CGAAAAGGCC 
CTGTTCACGT TCAAGCAGGT GCAGCTCATT TGCGAGAGCA TGATCAAGGA GCGCGAGAAT 
CAGCTAAGGG AGCGCTACGA GTCCGTGCTG ACCACCAAGC TGGCCGAGCA GTACGATGCC 
TTTGTCAAGT TCACATATGA TCAGATACAG CGTCGCTACG AGGCAGCGCC TAGCTACCTG 
TCGTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001189059.1
CDS	471..1076
Translation	MACATLKRALDWESMNQRPPKRRRCNPFGQAGSNAGPASPSRDGPSTSAGLPHTPSNRFAKDSTEPSPFSESSLAKMSPDKMAESLCNEIKRLHKRKQLPITSSALERMQDSESSGSEMGPESPRRPDSPQNLMRHGEKALFTFKQVQLICESMIKERENQLRERYESVLTTKLAEQYDAFVKFTYDQIQRRYEAAPSYLS

Target ORF information:

RefSeq Version	NM_001202130.2
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster akirin, transcript variant D (akirin), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001202130.2

ORF Insert Sequence:

ATGGCCTGTG CAACCCTGAA ACGAGCCCTA GACTGGGAGT CGATGAACCA GCGGCCTCCG 
AAGCGCCGGC GTTGCAATCC CTTTGGCCAG GCTGGGAGCA ATGCAGGTCC AGCGTCGCCA 
TCCCGCGACG GTCCCAGCAC CTCGGCTGGT CTGCCCCACA CGCCCAGCAA CCGATTCGCC 
AAGGATAGCA CCGAACCTAG TCCGTTCAGT GAGTCGTCGC TGGCCAAAAT GTCACCAGAC 
AAAATGGCCG AGAGCTTGTG CAATGAGATC AAGAGACTGC ACAAGCGCAA ACAGCTGCCG 
ATCACTTCGT CGGCCTTGGA ACGCATGCAG GATTCGGAGT CCAGCGGATC GGAGATGGGT 
CCAGAGAGTC CGCGCCGCCC GGACAGTCCA CAGAACCTGA TGCGCCACGG CGAAAAGGCC 
CTGTTCACGT TCAAGCAGGT GCAGCTCATT TGCGAGAGCA TGATCAAGGA GCGCGAGAAT 
CAGCTAAGGG AGCGCTACGA GTCCGTGCTG ACCACCAAGC TGGCCGAGCA GTACGATGCC 
TTTGTCAAGT TCACATATGA TCAGATACAG CGTCGCTACG AGGCAGCGCC TAGCTACCTG 
TCGTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

akirin ( NM_139856.4 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_648113.1 Drosophila melanogaster akirin, transcript variant A (akirin), mRNA.

Price & Availability↑

CloneID	OFa17794
Clone ID Related Accession (Same CDS sequence)	NM_168211.3 , NM_001202130.2 , NM_139856.4 , NM_001202129.2 , NM_001202131.2 , NM_001274582.1
Accession Version	NM_139856.4 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 606bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	akirin, isoform A
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_037436). On Jan 16, 2013 this sequence version replaced NM_139856.3. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGGCCTGTG CAACCCTGAA ACGAGCCCTA GACTGGGAGT CGATGAACCA GCGGCCTCCG 
AAGCGCCGGC GTTGCAATCC CTTTGGCCAG GCTGGGAGCA ATGCAGGTCC AGCGTCGCCA 
TCCCGCGACG GTCCCAGCAC CTCGGCTGGT CTGCCCCACA CGCCCAGCAA CCGATTCGCC 
AAGGATAGCA CCGAACCTAG TCCGTTCAGT GAGTCGTCGC TGGCCAAAAT GTCACCAGAC 
AAAATGGCCG AGAGCTTGTG CAATGAGATC AAGAGACTGC ACAAGCGCAA ACAGCTGCCG 
ATCACTTCGT CGGCCTTGGA ACGCATGCAG GATTCGGAGT CCAGCGGATC GGAGATGGGT 
CCAGAGAGTC CGCGCCGCCC GGACAGTCCA CAGAACCTGA TGCGCCACGG CGAAAAGGCC 
CTGTTCACGT TCAAGCAGGT GCAGCTCATT TGCGAGAGCA TGATCAAGGA GCGCGAGAAT 
CAGCTAAGGG AGCGCTACGA GTCCGTGCTG ACCACCAAGC TGGCCGAGCA GTACGATGCC 
TTTGTCAAGT TCACATATGA TCAGATACAG CGTCGCTACG AGGCAGCGCC TAGCTACCTG 
TCGTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_648113.1
CDS	471..1076
Translation	MACATLKRALDWESMNQRPPKRRRCNPFGQAGSNAGPASPSRDGPSTSAGLPHTPSNRFAKDSTEPSPFSESSLAKMSPDKMAESLCNEIKRLHKRKQLPITSSALERMQDSESSGSEMGPESPRRPDSPQNLMRHGEKALFTFKQVQLICESMIKERENQLRERYESVLTTKLAEQYDAFVKFTYDQIQRRYEAAPSYLS

Target ORF information:

RefSeq Version	NM_139856.4
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster akirin, transcript variant A (akirin), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_139856.4

ORF Insert Sequence:

ATGGCCTGTG CAACCCTGAA ACGAGCCCTA GACTGGGAGT CGATGAACCA GCGGCCTCCG 
AAGCGCCGGC GTTGCAATCC CTTTGGCCAG GCTGGGAGCA ATGCAGGTCC AGCGTCGCCA 
TCCCGCGACG GTCCCAGCAC CTCGGCTGGT CTGCCCCACA CGCCCAGCAA CCGATTCGCC 
AAGGATAGCA CCGAACCTAG TCCGTTCAGT GAGTCGTCGC TGGCCAAAAT GTCACCAGAC 
AAAATGGCCG AGAGCTTGTG CAATGAGATC AAGAGACTGC ACAAGCGCAA ACAGCTGCCG 
ATCACTTCGT CGGCCTTGGA ACGCATGCAG GATTCGGAGT CCAGCGGATC GGAGATGGGT 
CCAGAGAGTC CGCGCCGCCC GGACAGTCCA CAGAACCTGA TGCGCCACGG CGAAAAGGCC 
CTGTTCACGT TCAAGCAGGT GCAGCTCATT TGCGAGAGCA TGATCAAGGA GCGCGAGAAT 
CAGCTAAGGG AGCGCTACGA GTCCGTGCTG ACCACCAAGC TGGCCGAGCA GTACGATGCC 
TTTGTCAAGT TCACATATGA TCAGATACAG CGTCGCTACG AGGCAGCGCC TAGCTACCTG 
TCGTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

akirin ( NM_001202129.2 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_001189058.1 Drosophila melanogaster akirin, transcript variant C (akirin), mRNA.

Price & Availability↑

CloneID	OFa17794
Clone ID Related Accession (Same CDS sequence)	NM_168211.3 , NM_001202130.2 , NM_139856.4 , NM_001202129.2 , NM_001202131.2 , NM_001274582.1
Accession Version	NM_001202129.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 606bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	akirin, isoform C
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_037436). On Jan 16, 2013 this sequence version replaced NM_001202129.1. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGGCCTGTG CAACCCTGAA ACGAGCCCTA GACTGGGAGT CGATGAACCA GCGGCCTCCG 
AAGCGCCGGC GTTGCAATCC CTTTGGCCAG GCTGGGAGCA ATGCAGGTCC AGCGTCGCCA 
TCCCGCGACG GTCCCAGCAC CTCGGCTGGT CTGCCCCACA CGCCCAGCAA CCGATTCGCC 
AAGGATAGCA CCGAACCTAG TCCGTTCAGT GAGTCGTCGC TGGCCAAAAT GTCACCAGAC 
AAAATGGCCG AGAGCTTGTG CAATGAGATC AAGAGACTGC ACAAGCGCAA ACAGCTGCCG 
ATCACTTCGT CGGCCTTGGA ACGCATGCAG GATTCGGAGT CCAGCGGATC GGAGATGGGT 
CCAGAGAGTC CGCGCCGCCC GGACAGTCCA CAGAACCTGA TGCGCCACGG CGAAAAGGCC 
CTGTTCACGT TCAAGCAGGT GCAGCTCATT TGCGAGAGCA TGATCAAGGA GCGCGAGAAT 
CAGCTAAGGG AGCGCTACGA GTCCGTGCTG ACCACCAAGC TGGCCGAGCA GTACGATGCC 
TTTGTCAAGT TCACATATGA TCAGATACAG CGTCGCTACG AGGCAGCGCC TAGCTACCTG 
TCGTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001189058.1
CDS	340..945
Translation	MACATLKRALDWESMNQRPPKRRRCNPFGQAGSNAGPASPSRDGPSTSAGLPHTPSNRFAKDSTEPSPFSESSLAKMSPDKMAESLCNEIKRLHKRKQLPITSSALERMQDSESSGSEMGPESPRRPDSPQNLMRHGEKALFTFKQVQLICESMIKERENQLRERYESVLTTKLAEQYDAFVKFTYDQIQRRYEAAPSYLS

Target ORF information:

RefSeq Version	NM_001202129.2
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster akirin, transcript variant C (akirin), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001202129.2

ORF Insert Sequence:

ATGGCCTGTG CAACCCTGAA ACGAGCCCTA GACTGGGAGT CGATGAACCA GCGGCCTCCG 
AAGCGCCGGC GTTGCAATCC CTTTGGCCAG GCTGGGAGCA ATGCAGGTCC AGCGTCGCCA 
TCCCGCGACG GTCCCAGCAC CTCGGCTGGT CTGCCCCACA CGCCCAGCAA CCGATTCGCC 
AAGGATAGCA CCGAACCTAG TCCGTTCAGT GAGTCGTCGC TGGCCAAAAT GTCACCAGAC 
AAAATGGCCG AGAGCTTGTG CAATGAGATC AAGAGACTGC ACAAGCGCAA ACAGCTGCCG 
ATCACTTCGT CGGCCTTGGA ACGCATGCAG GATTCGGAGT CCAGCGGATC GGAGATGGGT 
CCAGAGAGTC CGCGCCGCCC GGACAGTCCA CAGAACCTGA TGCGCCACGG CGAAAAGGCC 
CTGTTCACGT TCAAGCAGGT GCAGCTCATT TGCGAGAGCA TGATCAAGGA GCGCGAGAAT 
CAGCTAAGGG AGCGCTACGA GTCCGTGCTG ACCACCAAGC TGGCCGAGCA GTACGATGCC 
TTTGTCAAGT TCACATATGA TCAGATACAG CGTCGCTACG AGGCAGCGCC TAGCTACCTG 
TCGTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

akirin ( NM_001202131.2 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_001189060.1 Drosophila melanogaster akirin, transcript variant E (akirin), mRNA.

Price & Availability↑

CloneID	OFa17794
Clone ID Related Accession (Same CDS sequence)	NM_168211.3 , NM_001202130.2 , NM_139856.4 , NM_001202129.2 , NM_001202131.2 , NM_001274582.1
Accession Version	NM_001202131.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 606bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	akirin, isoform E
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_037436). On Jan 16, 2013 this sequence version replaced NM_001202131.1. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGGCCTGTG CAACCCTGAA ACGAGCCCTA GACTGGGAGT CGATGAACCA GCGGCCTCCG 
AAGCGCCGGC GTTGCAATCC CTTTGGCCAG GCTGGGAGCA ATGCAGGTCC AGCGTCGCCA 
TCCCGCGACG GTCCCAGCAC CTCGGCTGGT CTGCCCCACA CGCCCAGCAA CCGATTCGCC 
AAGGATAGCA CCGAACCTAG TCCGTTCAGT GAGTCGTCGC TGGCCAAAAT GTCACCAGAC 
AAAATGGCCG AGAGCTTGTG CAATGAGATC AAGAGACTGC ACAAGCGCAA ACAGCTGCCG 
ATCACTTCGT CGGCCTTGGA ACGCATGCAG GATTCGGAGT CCAGCGGATC GGAGATGGGT 
CCAGAGAGTC CGCGCCGCCC GGACAGTCCA CAGAACCTGA TGCGCCACGG CGAAAAGGCC 
CTGTTCACGT TCAAGCAGGT GCAGCTCATT TGCGAGAGCA TGATCAAGGA GCGCGAGAAT 
CAGCTAAGGG AGCGCTACGA GTCCGTGCTG ACCACCAAGC TGGCCGAGCA GTACGATGCC 
TTTGTCAAGT TCACATATGA TCAGATACAG CGTCGCTACG AGGCAGCGCC TAGCTACCTG 
TCGTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001189060.1
CDS	330..935
Translation	MACATLKRALDWESMNQRPPKRRRCNPFGQAGSNAGPASPSRDGPSTSAGLPHTPSNRFAKDSTEPSPFSESSLAKMSPDKMAESLCNEIKRLHKRKQLPITSSALERMQDSESSGSEMGPESPRRPDSPQNLMRHGEKALFTFKQVQLICESMIKERENQLRERYESVLTTKLAEQYDAFVKFTYDQIQRRYEAAPSYLS

Target ORF information:

RefSeq Version	NM_001202131.2
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster akirin, transcript variant E (akirin), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001202131.2

ORF Insert Sequence:

ATGGCCTGTG CAACCCTGAA ACGAGCCCTA GACTGGGAGT CGATGAACCA GCGGCCTCCG 
AAGCGCCGGC GTTGCAATCC CTTTGGCCAG GCTGGGAGCA ATGCAGGTCC AGCGTCGCCA 
TCCCGCGACG GTCCCAGCAC CTCGGCTGGT CTGCCCCACA CGCCCAGCAA CCGATTCGCC 
AAGGATAGCA CCGAACCTAG TCCGTTCAGT GAGTCGTCGC TGGCCAAAAT GTCACCAGAC 
AAAATGGCCG AGAGCTTGTG CAATGAGATC AAGAGACTGC ACAAGCGCAA ACAGCTGCCG 
ATCACTTCGT CGGCCTTGGA ACGCATGCAG GATTCGGAGT CCAGCGGATC GGAGATGGGT 
CCAGAGAGTC CGCGCCGCCC GGACAGTCCA CAGAACCTGA TGCGCCACGG CGAAAAGGCC 
CTGTTCACGT TCAAGCAGGT GCAGCTCATT TGCGAGAGCA TGATCAAGGA GCGCGAGAAT 
CAGCTAAGGG AGCGCTACGA GTCCGTGCTG ACCACCAAGC TGGCCGAGCA GTACGATGCC 
TTTGTCAAGT TCACATATGA TCAGATACAG CGTCGCTACG AGGCAGCGCC TAGCTACCTG 
TCGTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

akirin ( NM_001274582.1 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_001261511.1 Drosophila melanogaster akirin, transcript variant F (akirin), mRNA.

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CloneID	OFa17794
Clone ID Related Accession (Same CDS sequence)	NM_168211.3 , NM_001202130.2 , NM_139856.4 , NM_001202129.2 , NM_001202131.2 , NM_001274582.1
Accession Version	NM_001274582.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 606bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	akirin, isoform F
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_037436). ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGGCCTGTG CAACCCTGAA ACGAGCCCTA GACTGGGAGT CGATGAACCA GCGGCCTCCG 
AAGCGCCGGC GTTGCAATCC CTTTGGCCAG GCTGGGAGCA ATGCAGGTCC AGCGTCGCCA 
TCCCGCGACG GTCCCAGCAC CTCGGCTGGT CTGCCCCACA CGCCCAGCAA CCGATTCGCC 
AAGGATAGCA CCGAACCTAG TCCGTTCAGT GAGTCGTCGC TGGCCAAAAT GTCACCAGAC 
AAAATGGCCG AGAGCTTGTG CAATGAGATC AAGAGACTGC ACAAGCGCAA ACAGCTGCCG 
ATCACTTCGT CGGCCTTGGA ACGCATGCAG GATTCGGAGT CCAGCGGATC GGAGATGGGT 
CCAGAGAGTC CGCGCCGCCC GGACAGTCCA CAGAACCTGA TGCGCCACGG CGAAAAGGCC 
CTGTTCACGT TCAAGCAGGT GCAGCTCATT TGCGAGAGCA TGATCAAGGA GCGCGAGAAT 
CAGCTAAGGG AGCGCTACGA GTCCGTGCTG ACCACCAAGC TGGCCGAGCA GTACGATGCC 
TTTGTCAAGT TCACATATGA TCAGATACAG CGTCGCTACG AGGCAGCGCC TAGCTACCTG 
TCGTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001261511.1
CDS	355..960
Translation	MACATLKRALDWESMNQRPPKRRRCNPFGQAGSNAGPASPSRDGPSTSAGLPHTPSNRFAKDSTEPSPFSESSLAKMSPDKMAESLCNEIKRLHKRKQLPITSSALERMQDSESSGSEMGPESPRRPDSPQNLMRHGEKALFTFKQVQLICESMIKERENQLRERYESVLTTKLAEQYDAFVKFTYDQIQRRYEAAPSYLS

Target ORF information:

RefSeq Version	NM_001274582.1
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster akirin, transcript variant F (akirin), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001274582.1

ORF Insert Sequence:

ATGGCCTGTG CAACCCTGAA ACGAGCCCTA GACTGGGAGT CGATGAACCA GCGGCCTCCG 
AAGCGCCGGC GTTGCAATCC CTTTGGCCAG GCTGGGAGCA ATGCAGGTCC AGCGTCGCCA 
TCCCGCGACG GTCCCAGCAC CTCGGCTGGT CTGCCCCACA CGCCCAGCAA CCGATTCGCC 
AAGGATAGCA CCGAACCTAG TCCGTTCAGT GAGTCGTCGC TGGCCAAAAT GTCACCAGAC 
AAAATGGCCG AGAGCTTGTG CAATGAGATC AAGAGACTGC ACAAGCGCAA ACAGCTGCCG 
ATCACTTCGT CGGCCTTGGA ACGCATGCAG GATTCGGAGT CCAGCGGATC GGAGATGGGT 
CCAGAGAGTC CGCGCCGCCC GGACAGTCCA CAGAACCTGA TGCGCCACGG CGAAAAGGCC 
CTGTTCACGT TCAAGCAGGT GCAGCTCATT TGCGAGAGCA TGATCAAGGA GCGCGAGAAT 
CAGCTAAGGG AGCGCTACGA GTCCGTGCTG ACCACCAAGC TGGCCGAGCA GTACGATGCC 
TTTGTCAAGT TCACATATGA TCAGATACAG CGTCGCTACG AGGCAGCGCC TAGCTACCTG 
TCGTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)
Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM,

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)
Crosby MA,Gramates LS,Dos Santos G,Matthews BB,St Pierre SE,Zhou P,Schroeder AJ,Falls K,Emmert DB,Russo SM,Gelbart WM,

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)
Hoskins RA,Carlson JW,Kennedy C,Acevedo D,Evans-Holm M,Frise E,Wan KH,Park S,Mendez-Lago M,Rossi F,Villasante A,Dimitri P,Karpen GH,Celniker SE

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)
Smith CD,Shu S,Mungall CJ,Karpen GH

Combined evidence annotation of transposable elements in genome sequences.
PLoS computational biology1(2)166-75(2005 Jul)
Quesneville H,Bergman CM,Andrieu O,Autard D,Nouaud D,Ashburner M,Anxolabehere D

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akirin cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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