CG42820 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene
Clones
gRNAs

Summary

Gene Symbol	CG42820
Entrez Gene ID	34161
Full Name	CG42820 gene product from transcript CG42820-RA
Synonyms	CG13394,Dmel\CG42820,Dmel_CG13394
Gene Type	protein-coding
Organism	Drosophila melanogaster(fruit fly)
Genome	Chromosome: 2L Map Location: 29C1-29C1

mRNA and Protein(s)

mRNA	Protein	Name
NM_205937.1	NP_995659.1	uncharacterized protein

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
Matthews BB, Dos Santos G, Crosby MA, Emmert DB, St Pierre SE, Gramates LS, Zhou P, Schroeder AJ, Falls K, Strelets V, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
Crosby MA, Gramates LS, Dos Santos G, Matthews BB, St Pierre SE, Zhou P, Schroeder AJ, Falls K, Emmert DB, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Hoskins RA, Carlson JW, Kennedy C, Acevedo D, Evans-Holm M, Frise E, Wan KH, Park S, Mendez-Lago M, Rossi F, Villasante A, Dimitri P, Karpen GH, Celniker SE
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Smith CD, Shu S, Mungall CJ, Karpen GH
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)

Combined evidence annotation of transposable elements in genome sequences.
Quesneville H, Bergman CM, Andrieu O, Autard D, Nouaud D, Ashburner M, Anxolabehere D
PLoS computational biology1(2)166-75(2005 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following CG42820 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the CG42820 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OFa16472	NM_205937.1 Latest version!	Drosophila melanogaster uncharacterized protein (CG42820), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	12-14	$426.30 $609.00

ORF Online Only Promotion

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

CG42820 ( NM_205937.1 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_995659.1 Drosophila melanogaster uncharacterized protein (CG42820), mRNA.

Price & Availability↑

CloneID	OFa16472
Clone ID Related Accession (Same CDS sequence)	NM_205937.1
Accession Version	NM_205937.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2070bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	uncharacterized protein
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033779). ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGGTAAAGA ATACAGGTGT TGATTTGGGA CTACCCGTGG CTAGTTGGTA TCGTGGTCTA 
TCGCTCGATC AGATGCAGGC GGCCGATGAG CTGGGAACGG CACTGCAATT CGATATTAGG 
TCCATTCGGG ATTGTCTGCT GCGCCTGGGA GTGCAACCTT TGATCAGAAA TCGTGAACTC 
CATAGAATTT GGCGTTTCAG TCGTGGCCAG AAACTGGCCT TTCTCTACTT TCTATTCCAG 
GAGCACTACG ACACCGGCAC TTCGTGCGGA AAGTACTCAG TTAATGGACA ACTTCTGCTC 
TCGGCCATCG CCTATCTGGA TTTGCCTGCA ACTTTTCGAG CTCTAGACAA AGTGCTACCT 
CTACCCGGTG TTTTATGTGG GCAAACCAAG ATACAGATGA AAAATCGACA GATTAATAAT 
AATCGCTCTG CTCGGCCTTC CATCATAATA CCGAATTCTA AGACCTATCC ACAAAATATA 
GATGAAGAAA TGCCACTGGA TCTACCGGCT ACATTTCGAG CTCTGGACAA AGTTCTTTCC 
TCGCATACAA CTAAAAAGAA ACCATCGTCT TCGCGCAAAA GCTACTACTT TCAAAAGCAA 
CCACGTCCCA AAACCACTCC CCGTCGGTCT AATCAGTTTT TGTCGGATTC GCCGCTGTTA 
AAGATTCAGA TCCCTAACGA AGTGGGCGAT CCCAAAGAAG ATGAGGACCG TTGGTATGCC 
GACTTCCAGT TTCATCCCAT CCAGCGAACA GTTAAGGCAG TTATCAAACA CGAACTGTGT 
CACCTTTTCG ACCACATAGA CGAGGTTACC ACGGATCCTG CACAGAAAGC GAGGGATCTG 
TGCGGGTTCC ATGAGGAAAC TCGAACCCAG GAGCGACAGG CGTTCCTGCA AGAGCAGCGA 
CGACGCTATT TGGATATGAT TGACTTGGAA GGGACCGCAA AGCGACTTAC AAGGGAACGG 
ATTTTGCATC ACATTAATCG CGACGTGGAT GAGTACCTTC TAAAGTTTGG TGACAAGGGC 
TGGAGTCCTG GTGTGCCTGC TTTCCGGAAA GCCGGTTGTG TTGCTTGCAA CGAATTGGTG 
CACGTAAGCT TGGACACTCC TCCCCAGGTG CTACTCCTCG AAGGTGAATG GGGACGTCTG 
TACGACAGGA GTGGTGCGCT GATGCGACTC TGCGCTGGTG AGGATGGCGA ACCAGATGTA 
TTGGCGGAGG AGGAGCAGGA GGAGGAGGAG GATTCTATTG CCATACCTGA ATATTTCACG 
TCACCCGGAG ACCACAAGCC CTTCGCCTTC AACTATCCAC ACGTTTTCAA AAGGAACAGC 
AAGCAGTCTT TGGACACAAA TGATGTCGTT AAGAAGTCCT TAATGGAAGC ACTCGGTGGC 
CAAAAAAATG AGCATCGACA AGGAGTCCTT GCATCGGGGC CGATAAGGAG AAGTCACATC 
AACGAAGCCG TGTCCCGATG TGTGAGAAAA ATCTTTGAGA AGAGTTTGCT GGCGGTGCCG 
ACTACGCCGA CACCCAAGGA TTCCATCGAA CGCCTCGTCT ACAATCGCGA GCGAATCGAT 
CCCGATGATG ACAAGTTCAT GGACCAAATG CTAAGCGATG GCTTTGAAAT CTTGCGTCGC 
GACAGCAAAC TGGTGCTGGC CAGCCTCCAC AATGGCCATC AAATTCCGGA AGTACGGGAA 
TGGATTTGTA GGAGATATGG TAAGCGATAT GGTCCACAAA GCCATGCGGA TTTCGAAAGC 
TACAGACACA ATATGGCTAA ATTGTCGGAG ATGGAAAAGA AATTGATTCC GCTGCTAACT 
AATATAGATC CGCTGATCGT AAAACAAAAT CCCATTCCAT ATGCACTGCA CAAGGAAATT 
ATGGAAAAAT CCAACAAATT TAAGAAGTCA TTTCGCGATG AAGTCCTTCA GATCGTCCTG 
AAGCAATCCC GTCTCTGCTG GCAGGCGCAG CACAGCCTGC GCTTTGTCAA CAGTTCCAGG 
ATTCGTCGTA CCTTTTTTAC TTATCTGCCC AGTTCTGTCA GGAGTATAGA TCCCACCTTC 
AGCTACTACT TAGCTCGTAA AAATGGCTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_995659.1
CDS	104..2173
Translation	MVKNTGVDLGLPVASWYRGLSLDQMQAADELGTALQFDIRSIRDCLLRLGVQPLIRNRELHRIWRFSRGQKLAFLYFLFQEHYDTGTSCGKYSVNGQLLLSAIAYLDLPATFRALDKVLPLPGVLCGQTKIQMKNRQINNNRSARPSIIIPNSKTYPQNIDEEMPLDLPATFRALDKVLSSHTTKKKPSSSRKSYYFQKQPRPKTTPRRSNQFLSDSPLLKIQIPNEVGDPKEDEDRWYADFQFHPIQRTVKAVIKHELCHLFDHIDEVTTDPAQKARDLCGFHEETRTQERQAFLQEQRRRYLDMIDLEGTAKRLTRERILHHINRDVDEYLLKFGDKGWSPGVPAFRKAGCVACNELVHVSLDTPPQVLLLEGEWGRLYDRSGALMRLCAGEDGEPDVLAEEEQEEEEDSIAIPEYFTSPGDHKPFAFNYPHVFKRNSKQSLDTNDVVKKSLMEALGGQKNEHRQGVLASGPIRRSHINEAVSRCVRKIFEKSLLAVPTTPTPKDSIERLVYNRERIDPDDDKFMDQMLSDGFEILRRDSKLVLASLHNGHQIPEVREWICRRYGKRYGPQSHADFESYRHNMAKLSEMEKKLIPLLTNIDPLIVKQNPIPYALHKEIMEKSNKFKKSFRDEVLQIVLKQSRLCWQAQHSLRFVNSSRIRRTFFTYLPSSVRSIDPTFSYYLARKNG

Target ORF information:

RefSeq Version	NM_205937.1
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster uncharacterized protein (CG42820), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_205937.1

ORF Insert Sequence:

ATGGTAAAGA ATACAGGTGT TGATTTGGGA CTACCCGTGG CTAGTTGGTA TCGTGGTCTA 
TCGCTCGATC AGATGCAGGC GGCCGATGAG CTGGGAACGG CACTGCAATT CGATATTAGG 
TCCATTCGGG ATTGTCTGCT GCGCCTGGGA GTGCAACCTT TGATCAGAAA TCGTGAACTC 
CATAGAATTT GGCGTTTCAG TCGTGGCCAG AAACTGGCCT TTCTCTACTT TCTATTCCAG 
GAGCACTACG ACACCGGCAC TTCGTGCGGA AAGTACTCAG TTAATGGACA ACTTCTGCTC 
TCGGCCATCG CCTATCTGGA TTTGCCTGCA ACTTTTCGAG CTCTAGACAA AGTGCTACCT 
CTACCCGGTG TTTTATGTGG GCAAACCAAG ATACAGATGA AAAATCGACA GATTAATAAT 
AATCGCTCTG CTCGGCCTTC CATCATAATA CCGAATTCTA AGACCTATCC ACAAAATATA 
GATGAAGAAA TGCCACTGGA TCTACCGGCT ACATTTCGAG CTCTGGACAA AGTTCTTTCC 
TCGCATACAA CTAAAAAGAA ACCATCGTCT TCGCGCAAAA GCTACTACTT TCAAAAGCAA 
CCACGTCCCA AAACCACTCC CCGTCGGTCT AATCAGTTTT TGTCGGATTC GCCGCTGTTA 
AAGATTCAGA TCCCTAACGA AGTGGGCGAT CCCAAAGAAG ATGAGGACCG TTGGTATGCC 
GACTTCCAGT TTCATCCCAT CCAGCGAACA GTTAAGGCAG TTATCAAACA CGAACTGTGT 
CACCTTTTCG ACCACATAGA CGAGGTTACC ACGGATCCTG CACAGAAAGC GAGGGATCTG 
TGCGGGTTCC ATGAGGAAAC TCGAACCCAG GAGCGACAGG CGTTCCTGCA AGAGCAGCGA 
CGACGCTATT TGGATATGAT TGACTTGGAA GGGACCGCAA AGCGACTTAC AAGGGAACGG 
ATTTTGCATC ACATTAATCG CGACGTGGAT GAGTACCTTC TAAAGTTTGG TGACAAGGGC 
TGGAGTCCTG GTGTGCCTGC TTTCCGGAAA GCCGGTTGTG TTGCTTGCAA CGAATTGGTG 
CACGTAAGCT TGGACACTCC TCCCCAGGTG CTACTCCTCG AAGGTGAATG GGGACGTCTG 
TACGACAGGA GTGGTGCGCT GATGCGACTC TGCGCTGGTG AGGATGGCGA ACCAGATGTA 
TTGGCGGAGG AGGAGCAGGA GGAGGAGGAG GATTCTATTG CCATACCTGA ATATTTCACG 
TCACCCGGAG ACCACAAGCC CTTCGCCTTC AACTATCCAC ACGTTTTCAA AAGGAACAGC 
AAGCAGTCTT TGGACACAAA TGATGTCGTT AAGAAGTCCT TAATGGAAGC ACTCGGTGGC 
CAAAAAAATG AGCATCGACA AGGAGTCCTT GCATCGGGGC CGATAAGGAG AAGTCACATC 
AACGAAGCCG TGTCCCGATG TGTGAGAAAA ATCTTTGAGA AGAGTTTGCT GGCGGTGCCG 
ACTACGCCGA CACCCAAGGA TTCCATCGAA CGCCTCGTCT ACAATCGCGA GCGAATCGAT 
CCCGATGATG ACAAGTTCAT GGACCAAATG CTAAGCGATG GCTTTGAAAT CTTGCGTCGC 
GACAGCAAAC TGGTGCTGGC CAGCCTCCAC AATGGCCATC AAATTCCGGA AGTACGGGAA 
TGGATTTGTA GGAGATATGG TAAGCGATAT GGTCCACAAA GCCATGCGGA TTTCGAAAGC 
TACAGACACA ATATGGCTAA ATTGTCGGAG ATGGAAAAGA AATTGATTCC GCTGCTAACT 
AATATAGATC CGCTGATCGT AAAACAAAAT CCCATTCCAT ATGCACTGCA CAAGGAAATT 
ATGGAAAAAT CCAACAAATT TAAGAAGTCA TTTCGCGATG AAGTCCTTCA GATCGTCCTG 
AAGCAATCCC GTCTCTGCTG GCAGGCGCAG CACAGCCTGC GCTTTGTCAA CAGTTCCAGG 
ATTCGTCGTA CCTTTTTTAC TTATCTGCCC AGTTCTGTCA GGAGTATAGA TCCCACCTTC 
AGCTACTACT TAGCTCGTAA AAATGGCTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)
Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM,

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)
Crosby MA,Gramates LS,Dos Santos G,Matthews BB,St Pierre SE,Zhou P,Schroeder AJ,Falls K,Emmert DB,Russo SM,Gelbart WM,

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)
Hoskins RA,Carlson JW,Kennedy C,Acevedo D,Evans-Holm M,Frise E,Wan KH,Park S,Mendez-Lago M,Rossi F,Villasante A,Dimitri P,Karpen GH,Celniker SE

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)
Smith CD,Shu S,Mungall CJ,Karpen GH

Combined evidence annotation of transposable elements in genome sequences.
PLoS computational biology1(2)166-75(2005 Jul)
Quesneville H,Bergman CM,Andrieu O,Autard D,Nouaud D,Ashburner M,Anxolabehere D

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CG42820 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene

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gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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