COX5B cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene
Clones
gRNAs

Summary

Gene Symbol	COX5B
Entrez Gene ID	33918
Full Name	Cytochrome c oxidase subunit 5B
Synonyms	BcDNA:RH49324,CG11015,COXB,CcO Vb,CoVb,Cox5b,Dmel\CG11015,Vb,anon-EST:Posey143,anon-WO0118547.187,cox5B
General protein information	Preferred Names Cytochrome c oxidase subunit 5B Names CG11015 gene product from transcript CG11015-RA CG11015-PA CG11015-PB COX5B-PA COX5B-PB cytochrome c oxidase Vb cytochrome c oxidase polypeptide Vb cytochrome c oxidase subunit 5B cytochrome c oxidase subunit Vb subunit Vb
Gene Type	protein-coding
Organism	Drosophila melanogaster(fruit fly)
Genome	Chromosome: 2L Map Location: 26E3-26E3

mRNA and Protein(s)

mRNA	Protein	Name
NM_135202.2	NP_609046.1	cytochrome c oxidase subunit 5B, isoform A
NM_001298749.1	NP_001285678.1	cytochrome c oxidase subunit 5B, isoform B

Pathways from BioSystems

Homologies

Caenorhabditis elegans (roundworm)	cco-1	NP_492601.1
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP008724	XP_314835.2
Drosophila melanogaster (fruit fly)	CoVb	NP_609046.1

Gene Ontology
Bibliography

Related articles in PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
Matthews BB, Dos Santos G, Crosby MA, Emmert DB, St Pierre SE, Gramates LS, Zhou P, Schroeder AJ, Falls K, Strelets V, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
Crosby MA, Gramates LS, Dos Santos G, Matthews BB, St Pierre SE, Zhou P, Schroeder AJ, Falls K, Emmert DB, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Hoskins RA, Carlson JW, Kennedy C, Acevedo D, Evans-Holm M, Frise E, Wan KH, Park S, Mendez-Lago M, Rossi F, Villasante A, Dimitri P, Karpen GH, Celniker SE
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Smith CD, Shu S, Mungall CJ, Karpen GH
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)

Combined evidence annotation of transposable elements in genome sequences.
Quesneville H, Bergman CM, Andrieu O, Autard D, Nouaud D, Ashburner M, Anxolabehere D
PLoS computational biology1(2)166-75(2005 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following COX5B gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the COX5B cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OFa13930	NM_135202.2 Latest version!	Drosophila melanogaster cytochrome c oxidase subunit 5B, transcript variant A (COX5B), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$104.30 $149.00
OFa13930	NM_001298749.1 Latest version!	Drosophila melanogaster cytochrome c oxidase subunit 5B, transcript variant B (COX5B), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$104.30 $149.00

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
1 Clone	30% OFF
2-4 Clone	40% OFF
5 or more Clone	50% OFF
All Other ORF Clones
30% OFF

*Business Day

** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

COX5B ( NM_135202.2 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_609046.1 Drosophila melanogaster cytochrome c oxidase subunit 5B, transcript variant A (COX5B), mRNA.

Price & Availability↑

CloneID	OFa13930
Clone ID Related Accession (Same CDS sequence)	NM_135202.2 , NM_001298749.1
Accession Version	NM_135202.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 363bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	cytochrome c oxidase subunit 5B, isoform A
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033779). On Nov 5, 2002 this sequence version replaced NM_135202.1. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGGCATCGA TCTGTGGACG CATGGCGCTC CGTGCCGCCG CACGCCAGAA TGTTGCCTAC 
ACGCCCGTGC GCTTCTGCAA AATGATGAAC GATCCTTTGG AGCACGCCAC TGGTATCGAG 
AAGCGCGAGC TGCTGCTTAA GGCCGCCGGC AATGATAACC CCTTCGACAT GAAGGTCTTC 
AAGCGGGGCG CCGGCACCAA GGAGAACCCC AACCTTATTC CATCGGCCTT CGATGCTCGC 
ATTGTGGGCT GCATCTGCGA AGAGGATCAG ACCTACGTGC AATGGATGTG GCTGCAGAAG 
GGCAACCAGA AACGTTGTGA GTGCGGCCAT TGGTTCAAGC TGGTGGAGAA GGCAGCTGTT 
TAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_609046.1
CDS	104..466
Translation	MASICGRMALRAAARQNVAYTPVRFCKMMNDPLEHATGIEKRELLLKAAGNDNPFDMKVFKRGAGTKENPNLIPSAFDARIVGCICEEDQTYVQWMWLQKGNQKRCECGHWFKLVEKAAV

Target ORF information:

RefSeq Version	NM_135202.2
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster cytochrome c oxidase subunit 5B, transcript variant A (COX5B), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_135202.2

ORF Insert Sequence:

ATGGCATCGA TCTGTGGACG CATGGCGCTC CGTGCCGCCG CACGCCAGAA TGTTGCCTAC 
ACGCCCGTGC GCTTCTGCAA AATGATGAAC GATCCTTTGG AGCACGCCAC TGGTATCGAG 
AAGCGCGAGC TGCTGCTTAA GGCCGCCGGC AATGATAACC CCTTCGACAT GAAGGTCTTC 
AAGCGGGGCG CCGGCACCAA GGAGAACCCC AACCTTATTC CATCGGCCTT CGATGCTCGC 
ATTGTGGGCT GCATCTGCGA AGAGGATCAG ACCTACGTGC AATGGATGTG GCTGCAGAAG 
GGCAACCAGA AACGTTGTGA GTGCGGCCAT TGGTTCAAGC TGGTGGAGAA GGCAGCTGTT 
TAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

COX5B ( NM_001298749.1 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_001285678.1 Drosophila melanogaster cytochrome c oxidase subunit 5B, transcript variant B (COX5B), mRNA.

Price & Availability↑

CloneID	OFa13930
Clone ID Related Accession (Same CDS sequence)	NM_135202.2 , NM_001298749.1
Accession Version	NM_001298749.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 363bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	cytochrome c oxidase subunit 5B, isoform B
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033779). ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGGCATCGA TCTGTGGACG CATGGCGCTC CGTGCCGCCG CACGCCAGAA TGTTGCCTAC 
ACGCCCGTGC GCTTCTGCAA AATGATGAAC GATCCTTTGG AGCACGCCAC TGGTATCGAG 
AAGCGCGAGC TGCTGCTTAA GGCCGCCGGC AATGATAACC CCTTCGACAT GAAGGTCTTC 
AAGCGGGGCG CCGGCACCAA GGAGAACCCC AACCTTATTC CATCGGCCTT CGATGCTCGC 
ATTGTGGGCT GCATCTGCGA AGAGGATCAG ACCTACGTGC AATGGATGTG GCTGCAGAAG 
GGCAACCAGA AACGTTGTGA GTGCGGCCAT TGGTTCAAGC TGGTGGAGAA GGCAGCTGTT 
TAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001285678.1
CDS	104..466
Translation	MASICGRMALRAAARQNVAYTPVRFCKMMNDPLEHATGIEKRELLLKAAGNDNPFDMKVFKRGAGTKENPNLIPSAFDARIVGCICEEDQTYVQWMWLQKGNQKRCECGHWFKLVEKAAV

Target ORF information:

RefSeq Version	NM_001298749.1
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster cytochrome c oxidase subunit 5B, transcript variant B (COX5B), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001298749.1

ORF Insert Sequence:

ATGGCATCGA TCTGTGGACG CATGGCGCTC CGTGCCGCCG CACGCCAGAA TGTTGCCTAC 
ACGCCCGTGC GCTTCTGCAA AATGATGAAC GATCCTTTGG AGCACGCCAC TGGTATCGAG 
AAGCGCGAGC TGCTGCTTAA GGCCGCCGGC AATGATAACC CCTTCGACAT GAAGGTCTTC 
AAGCGGGGCG CCGGCACCAA GGAGAACCCC AACCTTATTC CATCGGCCTT CGATGCTCGC 
ATTGTGGGCT GCATCTGCGA AGAGGATCAG ACCTACGTGC AATGGATGTG GCTGCAGAAG 
GGCAACCAGA AACGTTGTGA GTGCGGCCAT TGGTTCAAGC TGGTGGAGAA GGCAGCTGTT 
TAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)
Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM,

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)
Crosby MA,Gramates LS,Dos Santos G,Matthews BB,St Pierre SE,Zhou P,Schroeder AJ,Falls K,Emmert DB,Russo SM,Gelbart WM,

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)
Hoskins RA,Carlson JW,Kennedy C,Acevedo D,Evans-Holm M,Frise E,Wan KH,Park S,Mendez-Lago M,Rossi F,Villasante A,Dimitri P,Karpen GH,Celniker SE

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)
Smith CD,Shu S,Mungall CJ,Karpen GH

Combined evidence annotation of transposable elements in genome sequences.
PLoS computational biology1(2)166-75(2005 Jul)
Quesneville H,Bergman CM,Andrieu O,Autard D,Nouaud D,Ashburner M,Anxolabehere D

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COX5B cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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