Cog3 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene
Clones
gRNAs

Summary

Gene Symbol	Cog3
Entrez Gene ID	33562
Full Name	CG3248 gene product from transcript CG3248-RA
Synonyms	CG 3248,CG3248,COG3,Dmel\CG3248,SEC34,dCOG3
Gene Type	protein-coding
Organism	Drosophila melanogaster(fruit fly)
Genome	Chromosome: 2L Map Location: 23F3-23F3

mRNA and Protein(s)

mRNA	Protein	Name
NM_134935.3	NP_608779.1	Cog3

Pathways from BioSystems

Homologies

Homo sapiens (human)	COG3	NP_113619.2
	COG3	XP_001096875.1
Canis lupus familiaris (dog)	COG3	XP_848489.1
Arabidopsis thaliana (thale cress)	AT1G73430	NP_177485.2
Oryza sativa (rice)	Os08g0451000	NP_001061944.1
Pan troglodytes (chimpanzee)	COG3	XP_001158886.2
Rattus norvegicus (Norway rat)	Cog3	NP_001012157.1
Danio rerio (zebrafish)	cog3	NP_001137512.1
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP003970	XP_318422.5
Bos taurus (cattle)	COG3	NP_001193466.1
Mus musculus (house mouse)	Cog3	NP_796355.2
Gallus gallus (chicken)	COG3	XP_417041.3
Drosophila melanogaster (fruit fly)	Cog3	NP_608779.1
Caenorhabditis elegans (roundworm)	cogc-3	NP_001021806.1
Xenopus tropicalis (tropical clawed frog)	cog3	XP_002941013.2

Gene Ontology
Bibliography

Related articles in PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
Matthews BB, Dos Santos G, Crosby MA, Emmert DB, St Pierre SE, Gramates LS, Zhou P, Schroeder AJ, Falls K, Strelets V, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
Crosby MA, Gramates LS, Dos Santos G, Matthews BB, St Pierre SE, Zhou P, Schroeder AJ, Falls K, Emmert DB, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Hoskins RA, Carlson JW, Kennedy C, Acevedo D, Evans-Holm M, Frise E, Wan KH, Park S, Mendez-Lago M, Rossi F, Villasante A, Dimitri P, Karpen GH, Celniker SE
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Smith CD, Shu S, Mungall CJ, Karpen GH
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)

Combined evidence annotation of transposable elements in genome sequences.
Quesneville H, Bergman CM, Andrieu O, Autard D, Nouaud D, Ashburner M, Anxolabehere D
PLoS computational biology1(2)166-75(2005 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following Cog3 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Cog3 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OFa13642	NM_134935.3 Latest version!	Drosophila melanogaster Cog3 (Cog3), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	12-14	$510.30 $729.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

Cog3 ( NM_134935.3 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_608779.1 Drosophila melanogaster Cog3 (Cog3), mRNA.

Price & Availability↑

CloneID	OFa13642
Clone ID Related Accession (Same CDS sequence)	NM_134935.3
Accession Version	NM_134935.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2718bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	Cog3
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033779). On Jul 15, 2014 this sequence version replaced NM_134935.2. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGGATGACG TCGAACGAAT TCAGAGCGAG AATGAGAATT TGCGCAAGAT TCGCAATCGC 
CTGATGCAAT GGGAGTCCAA AACGGACCCG CTGGCGGCTC TGAGTATCCA GCAAGAGGAG 
CACCTGGACG TCCTGACCAA TCTGTGGCGC GACAGCGGAC CATCGGCACC GGCACCGACT 
ACGCCCACCC AGGTGGGTCC TACCGATTCA TCGGCAGCTG CAACTTCGCA AAGCGGCGAT 
GACATCAGAC TACCTGCGGA GGGACTCCAG AACACCAATG AGTTTCTGCT TTGGTTCGCG 
GACGTCAGCG CCGAGATCGA GCAACGTGGC GATGCCGACT ACCACAAATA CCTGCAGCAG 
CTGGAGCAGC GCAAAGCGGA GTGCTCCCAC ATGCTGGACC AGATCGCTGG GGCCATGGAG 
CGCCTGGGTG CCCTCTGCGA CGAGTACGAC TTTGTGTCGC AAAAGACCAG CGCTCTGAAC 
ACGGCCAGCG AGCAGTTGAT CGAGGAGCAG GAGCGACTGC AGGAGCTGAG TCACGAGATT 
CAACGCCGTC TGCACTACTT CAGCCAGGTG GAGTTGCTCA ACCAACGACT TCAGAGCCCC 
ACGCTTTCGG TGGCTAGCGA AGCGTTCCGG GAGTGCCTCA ACAAGATCGA CGAATGCCTA 
AACTACATCG AGGAGAATCC CAAATTCAAG GATGCGGCCG CCTACAATGT GAAGTACAGG 
CAGTGCCTGG CCAAAGCCTC GGGTCTGGTG CGTAACTATG TGACGAGTGT GATAAACCAG 
GCAACCGAGG CCACGCTCCA TCCCAAGAAC AATATGCCGG ATGCCTCCGC TGCTCTCAAG 
GCACCAGATG CCGCATTCGC TCTGTACTAC GGCAAATATC AAACGGCCGC GGCAAAAGTG 
AAGCGGGTCG CCCAGTTGAT TGAGTCCCGG TCGGAACACA GCCTCGACTA CGCCCAACTA 
ATGGCGGATC TTCAACAGCA CTACTTGGCG CAAAGAGCCA GCGTTATGTC GCCAGCAGTG 
AATCTGTCCA TACAAAACGT TAAGGTGGCC CACAAAGGGG ATCACTGCTC TCTCACCCGA 
AGCGCCTGCG CCTTTTTGGT GCATGTTTGC CAGGACGAAC AGCGTTTGTT CTACCAGTTC 
TTCAGCACAG GAGCGCCACA CCTGACGGTT TATCTGGAGG GTCTGTGCAC CATTCTCTAT 
GACACCATGC GACCCTTTAT TATACATATT AATCACTTGG AAACGCTGGC GGAGATCTGC 
TCCATTCTAC GAATTGAAAT GCTGGAGGAG CATGTCCAGC AGAATCCTGT TGCACTGGAA 
GCCTTTGCCA CCATTGCGCA CCAATTGCTG CAGGATGTGC AGGAGCGTTT AGTCTTCCGA 
GCGCATCTAT ATCTGCAGTC GGACATTCAG AACTTTAATC CCTCATCGGG AGATTTGGCC 
TACCCCGAGA AGTTGGAAAT GATGGAGAGC ATTGCCCTGT CCCTTCAAGA ACCCGCCCCT 
TTGCGCCGCT CCGATTCTCG CAACTCCATG GTTTCCAGTG TTTCAAGTGC TGTGGAGACG 
GAAAGCGTGG CCACTGCCTA CACGGTGAAG CAAATGAATT CCCCGGCCGA TCTGCATGGC 
ATGTGGTACC CCACAGTACG TCGGACACTG GTGTGCCTCT CAAGGCTTTA CCGCTGCGTG 
GATCGACCCA TTTTCCAAGG CCTTTCTCAG GAAGCGCTCA AGCTGTGCAT CCAGAGTGTC 
TCTCATGCGG CTGGCAAGAT ATCAGCCAAT AAGACGCCAA TTGATGGCGA GCTCTTCGAA 
ATCAAGCATC TCCTAATTCT GCGGGAACAG ATTGCACCGT TTCGTGTGGA CTTTACGGTG 
AAGGAAACTT CGCTGGACTT TAGCAAGGTG AAGACCGCAG CCTTTGGATT GCTGCAGAAG 
CGCAAACAGC TCTTTTCGAT GGGTAGCAAT AATGCGCTGT TGGAATTCCT TCTGGAGGGC 
ACGCCGCAGA TCAAGGAGCA TTTACTCGAC TCTCGCAAGG AAGTTGACCG TCAGCTCAAG 
TCGGTGTGCG AGAAGTACAT CAAGGATGCA GTTCAAATGC TAGTGGGCCC TCTCATCACA 
TTCCTAGAAA AGGCGCAGAG TCTGTTGGCG CAGTCCACTC CAGCCACGCC CCAATCGCCG 
GAGTCGACGA AAGCCAGCTA CGTTCTAAGG CAAAGTCCAT GGGCCAGTCC GCAGCAGATC 
AGCAGTATAA TCCAGGAGAC GCAGCGCTTG ATCAAAGCCA AGCTGGCGGT GCTACAGCGG 
TCCATGCAGC TCTACCTAAG CAATCGTGAT ACAGAATTCA TCATCTTCAG ACCGATCCGA 
AACAACATCA TTCAATCGTT TGTAAAGCTG GAACAACTGC TGACCACCAA TGGTTACTCC 
ACAGATGATA TGATCATCAC GAGTTGTCCG TCGGCGGAGC AAGTTTCCAT ACTTTTATCC 
AGTGCCAGCA TTTTGGCCGC CGAGGGAGTC GCCAGCTTTG CAGCAGCAGC GCGCAAAATC 
AGCACGTCGT CGTCAGTGGA AGGTTCCACG GTTGGCAGAA AGCTAAGCGC GATGTCCAAC 
AAATCTGAAC TTGTGGAGGA GCCAAAAGTT GAAGAAGTCG CTGGCCAGAT CGAAGTGGTG 
CCCGCAGAAG TACAACCTCC TGCCAAGATC GAGGAGGAGG AAGTGACGGA AACGCAAACG 
CAGGCCAATT CCGAATAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_608779.1
CDS	30..2747
Translation	MDDVERIQSENENLRKIRNRLMQWESKTDPLAALSIQQEEHLDVLTNLWRDSGPSAPAPTTPTQVGPTDSSAAATSQSGDDIRLPAEGLQNTNEFLLWFADVSAEIEQRGDADYHKYLQQLEQRKAECSHMLDQIAGAMERLGALCDEYDFVSQKTSALNTASEQLIEEQERLQELSHEIQRRLHYFSQVELLNQRLQSPTLSVASEAFRECLNKIDECLNYIEENPKFKDAAAYNVKYRQCLAKASGLVRNYVTSVINQATEATLHPKNNMPDASAALKAPDAAFALYYGKYQTAAAKVKRVAQLIESRSEHSLDYAQLMADLQQHYLAQRASVMSPAVNLSIQNVKVAHKGDHCSLTRSACAFLVHVCQDEQRLFYQFFSTGAPHLTVYLEGLCTILYDTMRPFIIHINHLETLAEICSILRIEMLEEHVQQNPVALEAFATIAHQLLQDVQERLVFRAHLYLQSDIQNFNPSSGDLAYPEKLEMMESIALSLQEPAPLRRSDSRNSMVSSVSSAVETESVATAYTVKQMNSPADLHGMWYPTVRRTLVCLSRLYRCVDRPIFQGLSQEALKLCIQSVSHAAGKISANKTPIDGELFEIKHLLILREQIAPFRVDFTVKETSLDFSKVKTAAFGLLQKRKQLFSMGSNNALLEFLLEGTPQIKEHLLDSRKEVDRQLKSVCEKYIKDAVQMLVGPLITFLEKAQSLLAQSTPATPQSPESTKASYVLRQSPWASPQQISSIIQETQRLIKAKLAVLQRSMQLYLSNRDTEFIIFRPIRNNIIQSFVKLEQLLTTNGYSTDDMIITSCPSAEQVSILLSSASILAAEGVASFAAAARKISTSSSVEGSTVGRKLSAMSNKSELVEEPKVEEVAGQIEVVPAEVQPPAKIEEEEVTETQTQANSE

Target ORF information:

RefSeq Version	NM_134935.3
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster Cog3 (Cog3), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_134935.3

ORF Insert Sequence:

ATGGATGACG TCGAACGAAT TCAGAGCGAG AATGAGAATT TGCGCAAGAT TCGCAATCGC 
CTGATGCAAT GGGAGTCCAA AACGGACCCG CTGGCGGCTC TGAGTATCCA GCAAGAGGAG 
CACCTGGACG TCCTGACCAA TCTGTGGCGC GACAGCGGAC CATCGGCACC GGCACCGACT 
ACGCCCACCC AGGTGGGTCC TACCGATTCA TCGGCAGCTG CAACTTCGCA AAGCGGCGAT 
GACATCAGAC TACCTGCGGA GGGACTCCAG AACACCAATG AGTTTCTGCT TTGGTTCGCG 
GACGTCAGCG CCGAGATCGA GCAACGTGGC GATGCCGACT ACCACAAATA CCTGCAGCAG 
CTGGAGCAGC GCAAAGCGGA GTGCTCCCAC ATGCTGGACC AGATCGCTGG GGCCATGGAG 
CGCCTGGGTG CCCTCTGCGA CGAGTACGAC TTTGTGTCGC AAAAGACCAG CGCTCTGAAC 
ACGGCCAGCG AGCAGTTGAT CGAGGAGCAG GAGCGACTGC AGGAGCTGAG TCACGAGATT 
CAACGCCGTC TGCACTACTT CAGCCAGGTG GAGTTGCTCA ACCAACGACT TCAGAGCCCC 
ACGCTTTCGG TGGCTAGCGA AGCGTTCCGG GAGTGCCTCA ACAAGATCGA CGAATGCCTA 
AACTACATCG AGGAGAATCC CAAATTCAAG GATGCGGCCG CCTACAATGT GAAGTACAGG 
CAGTGCCTGG CCAAAGCCTC GGGTCTGGTG CGTAACTATG TGACGAGTGT GATAAACCAG 
GCAACCGAGG CCACGCTCCA TCCCAAGAAC AATATGCCGG ATGCCTCCGC TGCTCTCAAG 
GCACCAGATG CCGCATTCGC TCTGTACTAC GGCAAATATC AAACGGCCGC GGCAAAAGTG 
AAGCGGGTCG CCCAGTTGAT TGAGTCCCGG TCGGAACACA GCCTCGACTA CGCCCAACTA 
ATGGCGGATC TTCAACAGCA CTACTTGGCG CAAAGAGCCA GCGTTATGTC GCCAGCAGTG 
AATCTGTCCA TACAAAACGT TAAGGTGGCC CACAAAGGGG ATCACTGCTC TCTCACCCGA 
AGCGCCTGCG CCTTTTTGGT GCATGTTTGC CAGGACGAAC AGCGTTTGTT CTACCAGTTC 
TTCAGCACAG GAGCGCCACA CCTGACGGTT TATCTGGAGG GTCTGTGCAC CATTCTCTAT 
GACACCATGC GACCCTTTAT TATACATATT AATCACTTGG AAACGCTGGC GGAGATCTGC 
TCCATTCTAC GAATTGAAAT GCTGGAGGAG CATGTCCAGC AGAATCCTGT TGCACTGGAA 
GCCTTTGCCA CCATTGCGCA CCAATTGCTG CAGGATGTGC AGGAGCGTTT AGTCTTCCGA 
GCGCATCTAT ATCTGCAGTC GGACATTCAG AACTTTAATC CCTCATCGGG AGATTTGGCC 
TACCCCGAGA AGTTGGAAAT GATGGAGAGC ATTGCCCTGT CCCTTCAAGA ACCCGCCCCT 
TTGCGCCGCT CCGATTCTCG CAACTCCATG GTTTCCAGTG TTTCAAGTGC TGTGGAGACG 
GAAAGCGTGG CCACTGCCTA CACGGTGAAG CAAATGAATT CCCCGGCCGA TCTGCATGGC 
ATGTGGTACC CCACAGTACG TCGGACACTG GTGTGCCTCT CAAGGCTTTA CCGCTGCGTG 
GATCGACCCA TTTTCCAAGG CCTTTCTCAG GAAGCGCTCA AGCTGTGCAT CCAGAGTGTC 
TCTCATGCGG CTGGCAAGAT ATCAGCCAAT AAGACGCCAA TTGATGGCGA GCTCTTCGAA 
ATCAAGCATC TCCTAATTCT GCGGGAACAG ATTGCACCGT TTCGTGTGGA CTTTACGGTG 
AAGGAAACTT CGCTGGACTT TAGCAAGGTG AAGACCGCAG CCTTTGGATT GCTGCAGAAG 
CGCAAACAGC TCTTTTCGAT GGGTAGCAAT AATGCGCTGT TGGAATTCCT TCTGGAGGGC 
ACGCCGCAGA TCAAGGAGCA TTTACTCGAC TCTCGCAAGG AAGTTGACCG TCAGCTCAAG 
TCGGTGTGCG AGAAGTACAT CAAGGATGCA GTTCAAATGC TAGTGGGCCC TCTCATCACA 
TTCCTAGAAA AGGCGCAGAG TCTGTTGGCG CAGTCCACTC CAGCCACGCC CCAATCGCCG 
GAGTCGACGA AAGCCAGCTA CGTTCTAAGG CAAAGTCCAT GGGCCAGTCC GCAGCAGATC 
AGCAGTATAA TCCAGGAGAC GCAGCGCTTG ATCAAAGCCA AGCTGGCGGT GCTACAGCGG 
TCCATGCAGC TCTACCTAAG CAATCGTGAT ACAGAATTCA TCATCTTCAG ACCGATCCGA 
AACAACATCA TTCAATCGTT TGTAAAGCTG GAACAACTGC TGACCACCAA TGGTTACTCC 
ACAGATGATA TGATCATCAC GAGTTGTCCG TCGGCGGAGC AAGTTTCCAT ACTTTTATCC 
AGTGCCAGCA TTTTGGCCGC CGAGGGAGTC GCCAGCTTTG CAGCAGCAGC GCGCAAAATC 
AGCACGTCGT CGTCAGTGGA AGGTTCCACG GTTGGCAGAA AGCTAAGCGC GATGTCCAAC 
AAATCTGAAC TTGTGGAGGA GCCAAAAGTT GAAGAAGTCG CTGGCCAGAT CGAAGTGGTG 
CCCGCAGAAG TACAACCTCC TGCCAAGATC GAGGAGGAGG AAGTGACGGA AACGCAAACG 
CAGGCCAATT CCGAATAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)
Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM,

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)
Crosby MA,Gramates LS,Dos Santos G,Matthews BB,St Pierre SE,Zhou P,Schroeder AJ,Falls K,Emmert DB,Russo SM,Gelbart WM,

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)
Hoskins RA,Carlson JW,Kennedy C,Acevedo D,Evans-Holm M,Frise E,Wan KH,Park S,Mendez-Lago M,Rossi F,Villasante A,Dimitri P,Karpen GH,Celniker SE

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)
Smith CD,Shu S,Mungall CJ,Karpen GH

Combined evidence annotation of transposable elements in genome sequences.
PLoS computational biology1(2)166-75(2005 Jul)
Quesneville H,Bergman CM,Andrieu O,Autard D,Nouaud D,Ashburner M,Anxolabehere D

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Cog3 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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