sgcg cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	sgcg
Entrez Gene ID	445292
Full Name	sarcoglycan, gamma
Synonyms	zgc:100924
General protein information	Preferred Names sarcoglycan, gamma Names gamma-sarcoglycan
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
NM_001003748.2	NP_001003748.2	gamma-sarcoglycan

Pathways from BioSystems

Homologies

Rattus norvegicus (Norway rat)	Sgcg	NP_001006994.1
Mus musculus (house mouse)	Sgcg	NP_036022.1
Xenopus tropicalis (tropical clawed frog)	sgcg	NP_001072908.1
Homo sapiens (human)	SGCG	NP_000222.1
Canis lupus familiaris (dog)	SGCG	NP_001014298.1
Pan troglodytes (chimpanzee)	SGCG	XP_001151216.1
Bos taurus (cattle)	SGCG	NP_001068712.1
Gallus gallus (chicken)	SGCG	XP_417139.2
Danio rerio (zebrafish)	LOC100538014	XP_003200060.1
	LOC721411	XP_001117551.2
Danio rerio (zebrafish)	sgcg	NP_001003748.1

Gene Ontology
Bibliography

Related articles in PubMed

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)

RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)

Drug screening in Scn1a zebrafish mutant identifies clemizole as a potential Dravet syndrome treatment.
Baraban SC, Dinday MT, Hortopan GA
Nature communications42410(2013)

Chronic reduction in cardiac output induces hypoxic signaling in larval zebrafish even at a time when convective oxygen transport is not required.
Kopp R, Schwerte T, Egg M, Sandbichler AM, Egger B, Pelster B
Physiological genomics42A(1)8-23(2010 Sep)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following sgcg gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the sgcg cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODa20241	NM_001003748.2 Latest version!	Danio rerio sarcoglycan, gamma (sgcg), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$174.30 $249.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

sgcg ( NM_001003748.2 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_001003748.2 Danio rerio sarcoglycan, gamma (sgcg), mRNA.

Price & Availability↑

CloneID	ODa20241
Clone ID Related Accession (Same CDS sequence)	NM_001003748.2
Accession Version	NM_001003748.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 879bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2018-12-01
Organism	Danio rerio(zebrafish)
Product	gamma-sarcoglycan
Comment	Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BX927291.8 and EH471644.1. On Sep 27, 2016 this sequence version replaced NM_001003748.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: GDQH01037122.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END##

ATGGTGCGTG AGCAGTATGT CACCACCACA GAGGAATCTG GAGTTCTGTC TCCAGTCTCG 
GAGTACATTT ACATGATCGG CATCTACGGC TGGAGGAAGC GCTGCCTCTA TCTGTTTGTT 
CTGCTTCTAC TGATCATCCT GGTTGTCAAC TTTGCCCTTA CCATCTGGAT CTTGCGAGTA 
ATGTGGTTCA ATGCGGAAGG CATGGGGTAC TTGCAAGTCC ACGAAGATGG ACTAAGACTA 
GAGGGAGAGT CAGACTTTCT GTTCCCTGTT TACGCCCAGG AAATCGACTC CAGAGAGGAT 
TCAGCTCTAC TAATTCAATC CTCTGAAAAT GTTACACTCA ATGCTCGCAA TGCCAATGGT 
GATGTAACAG GAAGTGTGTC TGTAGGTCCC AGTCAGGCTG AGGGTTTTAG TAAATATTTC 
AACATCAGTT CAAACCATGA TGAAAATTTA TTTTACGCTG ATGGAAGTGG AGCCATTGTG 
GGAAAAGGAA AGCTCAGAGT AACTGGGCCA GAGGGTGCTT TATTCGAGCA TTCAGTCAGG 
ACTCCTATGG TTAAAGCAGT ACTTAACAAA GAGCTAAAAC TGGAATCTCC AACTCGCTCT 
CTTAGTATGG ATGCACCGAA AGGCGTTCAT GTCAAAGCCT TGGCTGGAAA TGTTGACGTG 
ACAGCACATT TTGACATTCT GCTTCATTCA GCTGAAGGCC TGTTGATTCT AGATGCAGAA 
ACCGTCCGTC TGCCGAAATT ACCGGTGGGA GAAGCCGGAA CTTCAGGAGA CTCTCAGGGA 
ATGTACAACA TGTATGAGGT TTGCGTTTGC CCCAGTGGGA AACTCTTTTT CTCCACGGCC 
GGAGTCTCCT CGACCTGCAG CGAAAGCCAG GACTGCTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001003748.2
CDS	385..1263
Translation	MVREQYVTTTEESGVLSPVSEYIYMIGIYGWRKRCLYLFVLLLLIILVVNFALTIWILRVMWFNAEGMGYLQVHEDGLRLEGESDFLFPVYAQEIDSREDSALLIQSSENVTLNARNANGDVTGSVSVGPSQAEGFSKYFNISSNHDENLFYADGSGAIVGKGKLRVTGPEGALFEHSVRTPMVKAVLNKELKLESPTRSLSMDAPKGVHVKALAGNVDVTAHFDILLHSAEGLLILDAETVRLPKLPVGEAGTSGDSQGMYNMYEVCVCPSGKLFFSTAGVSSTCSESQDC

Target ORF information:

RefSeq Version	NM_001003748.2
Organism	Danio rerio(zebrafish)
Definition	Danio rerio sarcoglycan, gamma (sgcg), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001003748.2

ORF Insert Sequence:

ATGGTGCGTG AGCAGTATGT CACCACCACA GAGGAATCTG GAGTTCTGTC TCCAGTCTCG 
GAGTACATTT ACATGATCGG CATCTACGGC TGGAGGAAGC GCTGCCTCTA TCTGTTTGTT 
CTGCTTCTAC TGATCATCCT GGTTGTCAAC TTTGCCCTTA CCATCTGGAT CTTGCGAGTA 
ATGTGGTTCA ATGCGGAAGG CATGGGGTAC TTGCAAGTCC ACGAAGATGG ACTAAGACTA 
GAGGGAGAGT CAGACTTTCT GTTCCCTGTT TACGCCCAGG AAATCGACTC CAGAGAGGAT 
TCAGCTCTAC TAATTCAATC CTCTGAAAAT GTTACACTCA ATGCTCGCAA TGCCAATGGT 
GATGTAACAG GAAGTGTGTC TGTAGGTCCC AGTCAGGCTG AGGGTTTTAG TAAATATTTC 
AACATCAGTT CAAACCATGA TGAAAATTTA TTTTACGCTG ATGGAAGTGG AGCCATTGTG 
GGAAAAGGAA AGCTCAGAGT AACTGGGCCA GAGGGTGCTT TATTCGAGCA TTCAGTCAGG 
ACTCCTATGG TTAAAGCAGT ACTTAACAAA GAGCTAAAAC TGGAATCTCC AACTCGCTCT 
CTTAGTATGG ATGCACCGAA AGGCGTTCAT GTCAAAGCCT TGGCTGGAAA TGTTGACGTG 
ACAGCACATT TTGACATTCT GCTTCATTCA GCTGAAGGCC TGTTGATTCT AGATGCAGAA 
ACCGTCCGTC TGCCGAAATT ACCGGTGGGA GAAGCCGGAA CTTCAGGAGA CTCTCAGGGA 
ATGTACAACA TGTATGAGGT TTGCGTTTGC CCCAGTGGGA AACTCTTTTT CTCCACGGCC 
GGAGTCTCCT CGACCTGCAG CGAAAGCCAG GACTGCTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
BMC genomics17368(2016 05)
Pasquier J,Cabau C,Nguyen T,Jouanno E,Severac D,Braasch I,Journot L,Pontarotti P,Klopp C,Postlethwait JH,Guiguen Y,Bobe J

RFX transcription factors are essential for hearing in mice.
Nature communications68549(2015 Oct)
Elkon R,Milon B,Morrison L,Shah M,Vijayakumar S,Racherla M,Leitch CC,Silipino L,Hadi S,Weiss-Gayet M,Barras E,Schmid CD,Ait-Lounis A,Barnes A,Song Y,Eisenman DJ,Eliyahu E,Frolenkov GI,Strome SE,Durand B,Zaghloul NA,Jones SM,Reith W,Hertzano R

Drug screening in Scn1a zebrafish mutant identifies clemizole as a potential Dravet syndrome treatment.
Nature communications42410(2013)
Baraban SC,Dinday MT,Hortopan GA

Chronic reduction in cardiac output induces hypoxic signaling in larval zebrafish even at a time when convective oxygen transport is not required.
Physiological genomics42A(1)8-23(2010 Sep)
Kopp R,Schwerte T,Egg M,Sandbichler AM,Egger B,Pelster B