yipf3 cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	yipf3
Entrez Gene ID	334511
Full Name	Yip1 domain family, member 3
Synonyms	fj97f06,wu:fj97f06,zgc:55279
General protein information	Preferred Names Yip1 domain family, member 3 Names protein YIPF3 YIP1 family member 3
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
NM_199907.1	NP_956201.1	protein YIPF3

Pathways from BioSystems

Homologies

Gallus gallus (chicken)	YIPF3	NP_001012584.1
Bos taurus (cattle)	YIPF3	NP_001069687.1
Homo sapiens (human)	YIPF3	NP_056203.2
	YIPF3	XP_001095575.1
Rattus norvegicus (Norway rat)	Yipf3	NP_001007802.1
Danio rerio (zebrafish)	yipf3	NP_956201.1
Caenorhabditis elegans (roundworm)	Y53C12A.3	NP_496093.2
Pan troglodytes (chimpanzee)	YIPF3	XP_001138532.2
Canis lupus familiaris (dog)	YIPF3	XP_538938.2
Mus musculus (house mouse)	Yipf3	NP_663328.2

Gene Ontology
Bibliography

Related articles in PubMed

Evolution of complexity in the zebrafish synapse proteome.
Bay?s ?, Collins MO, Reig-Viader R, Gou G, Goulding D, Izquierdo A, Choudhary JS, Emes RD, Grant SG
Nature communications814613(2017 Mar)

RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)

Transcriptional events co-regulated by hypoxia and cold stresses in Zebrafish larvae.
Long Y, Yan J, Song G, Li X, Li X, Li Q, Cui Z
BMC genomics16385(2015 May)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following yipf3 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the yipf3 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODa38436	NM_199907.1 Latest version!	Danio rerio Yip1 domain family, member 3 (yipf3), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$258.30 $369.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

yipf3 ( NM_199907.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_956201.1 Danio rerio Yip1 domain family, member 3 (yipf3), mRNA.

Price & Availability↑

CloneID	ODa38436
Clone ID Related Accession (Same CDS sequence)	NM_199907.1
Accession Version	NM_199907.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1035bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-02-15
Organism	Danio rerio(zebrafish)
Product	protein YIPF3
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC044136.1. ##Evidence-Data-START## Transcript exon combination :: BC044136.1, BC164802.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA2168447 [ECO:0000348] ##Evidence-Data-END##

ATGTCGGCAT CACAAGGAAG CAAAAACACG AACGCGGAAC CATGGGGAGG TTTTGACGAC 
AATATTATTC AGGGCACCGG CTCGGCGGTG ATAGACATGG AGAATATGGA TGACACCTCT 
GGATCCAGCT TTGAGGATGT GGGAGAAATG CATCAGCGGA TGAGGGAGGA AGAGGAGGTG 
ACCGCCGAGG CTGCGGCCAC AGAGGAGGAC AACGGAGAAT ATGGAGAATT CCTCGGGATG 
AAGGGCCTGA AGGGACAGCT GGGCAGACAG GTTGCAGATG AGGTATGGCA GGCAGGAAAG 
CGGCAGGCCT CGAAAGCTTT CAATCTCTAT GCTAATATTG ACATTCTCCG GCCATACTTT 
GATGTTGAGC CTATTCAAGT GAGAAACAGG CTGGTCGAAT CCTTGATCCC AGTCCGAATG 
ATCAACTTTC CACAGAAAGT GGCAGGAGAG CTGTATGGAC CAATGATGCT GGTGTTCACA 
CTGGTGGCTA TTCTGCTCCA TGGCATGAAG ACCTCAGGAA CAGTCATTAG AGAGGGCACG 
CTCATGGGCA CTGCCATTGG AACCGGTTTT GGGTACTGGC TGGGAGTGTC CTCCTTCATC 
TATTTCCTTG CTTACCTCTG CAATGCTCAA ATTACCATGC TGCAGATGCT GTCTTTGCTA 
GGTTATGGTC TCTTTGGCCA CTGTGTGGTC CTTTTCATCA CTTACAACGT CCACTTCCAT 
TCGCTCTTCT ACCTTCTCTG GATGGTGATT GGAGGACTCT CTACTCTGCG TATGGTGGCT 
GTGCTCATCT CCCGGACCGT TGGTCAGACT CCTCGCCTCA TCCTGTGTGG CTCTCTGGCT 
GCTCTGCACA TGCTGTTTCT GCTCTACCTG CACTTTGCTT ACCATAAGAT GGTTGAAGGT 
ATTCTGGATA CCTTGGAAGG ACCAAACATC CCACCCATCC AGAGAGTGGC CAGAGATGTT 
CCTGTGGTTG CCAGTGCTGT TGTGAATGCC ACCGTAAAGT CAATAGCTGC GATTGTACAG 
TCACAGCAAT TGTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_956201.1
CDS	127..1161
Translation	MSASQGSKNTNAEPWGGFDDNIIQGTGSAVIDMENMDDTSGSSFEDVGEMHQRMREEEEVTAEAAATEEDNGEYGEFLGMKGLKGQLGRQVADEVWQAGKRQASKAFNLYANIDILRPYFDVEPIQVRNRLVESLIPVRMINFPQKVAGELYGPMMLVFTLVAILLHGMKTSGTVIREGTLMGTAIGTGFGYWLGVSSFIYFLAYLCNAQITMLQMLSLLGYGLFGHCVVLFITYNVHFHSLFYLLWMVIGGLSTLRMVAVLISRTVGQTPRLILCGSLAALHMLFLLYLHFAYHKMVEGILDTLEGPNIPPIQRVARDVPVVASAVVNATVKSIAAIVQSQQL

Target ORF information:

RefSeq Version	NM_199907.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio Yip1 domain family, member 3 (yipf3), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_199907.1

ORF Insert Sequence:

ATGTCGGCAT CACAAGGAAG CAAAAACACG AACGCGGAAC CATGGGGAGG TTTTGACGAC 
AATATTATTC AGGGCACCGG CTCGGCGGTG ATAGACATGG AGAATATGGA TGACACCTCT 
GGATCCAGCT TTGAGGATGT GGGAGAAATG CATCAGCGGA TGAGGGAGGA AGAGGAGGTG 
ACCGCCGAGG CTGCGGCCAC AGAGGAGGAC AACGGAGAAT ATGGAGAATT CCTCGGGATG 
AAGGGCCTGA AGGGACAGCT GGGCAGACAG GTTGCAGATG AGGTATGGCA GGCAGGAAAG 
CGGCAGGCCT CGAAAGCTTT CAATCTCTAT GCTAATATTG ACATTCTCCG GCCATACTTT 
GATGTTGAGC CTATTCAAGT GAGAAACAGG CTGGTCGAAT CCTTGATCCC AGTCCGAATG 
ATCAACTTTC CACAGAAAGT GGCAGGAGAG CTGTATGGAC CAATGATGCT GGTGTTCACA 
CTGGTGGCTA TTCTGCTCCA TGGCATGAAG ACCTCAGGAA CAGTCATTAG AGAGGGCACG 
CTCATGGGCA CTGCCATTGG AACCGGTTTT GGGTACTGGC TGGGAGTGTC CTCCTTCATC 
TATTTCCTTG CTTACCTCTG CAATGCTCAA ATTACCATGC TGCAGATGCT GTCTTTGCTA 
GGTTATGGTC TCTTTGGCCA CTGTGTGGTC CTTTTCATCA CTTACAACGT CCACTTCCAT 
TCGCTCTTCT ACCTTCTCTG GATGGTGATT GGAGGACTCT CTACTCTGCG TATGGTGGCT 
GTGCTCATCT CCCGGACCGT TGGTCAGACT CCTCGCCTCA TCCTGTGTGG CTCTCTGGCT 
GCTCTGCACA TGCTGTTTCT GCTCTACCTG CACTTTGCTT ACCATAAGAT GGTTGAAGGT 
ATTCTGGATA CCTTGGAAGG ACCAAACATC CCACCCATCC AGAGAGTGGC CAGAGATGTT 
CCTGTGGTTG CCAGTGCTGT TGTGAATGCC ACCGTAAAGT CAATAGCTGC GATTGTACAG 
TCACAGCAAT TGTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Evolution of complexity in the zebrafish synapse proteome.
Nature communications814613(2017 Mar)
Bay?s ?,Collins MO,Reig-Viader R,Gou G,Goulding D,Izquierdo A,Choudhary JS,Emes RD,Grant SG

RFX transcription factors are essential for hearing in mice.
Nature communications68549(2015 Oct)
Elkon R,Milon B,Morrison L,Shah M,Vijayakumar S,Racherla M,Leitch CC,Silipino L,Hadi S,Weiss-Gayet M,Barras E,Schmid CD,Ait-Lounis A,Barnes A,Song Y,Eisenman DJ,Eliyahu E,Frolenkov GI,Strome SE,Durand B,Zaghloul NA,Jones SM,Reith W,Hertzano R

Transcriptional events co-regulated by hypoxia and cold stresses in Zebrafish larvae.
BMC genomics16385(2015 May)
Long Y,Yan J,Song G,Li X,Li X,Li Q,Cui Z