ORF » Species Summary » Danio rerio » vsx1 cDNA ORF clone

vsx1 cDNA ORF clone, Danio rerio(zebrafish)

The following vsx1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the vsx1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
ODa01107 NM_131333.1
Latest version!		 Danio rerio visual system homeobox 1 homolog, chx10-like (vsx1), mRNA. pcDNA3.1-C-(k)DYK or customized vector 7-9 $258.30
$369.00
ODa22390 XM_005158663.4
Latest version!		 Danio rerio visual system homeobox 1 homolog, chx10-like (vsx1), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 7-9 $258.30
$369.00
View Old Accession Versions >>
ODa22390 XM_005158663.3 Danio rerio visual system homeobox 1 homolog, chx10-like (vsx1), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 7-9 $258.30
$369.00
Hide Old Accession Versions >>

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    vsx1 ( NM_131333.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_571408.1 Danio rerio visual system homeobox 1 homolog, chx10-like (vsx1), mRNA.
    Price & Availability↑
    CloneID ODa01107
    Clone ID Related Accession (Same CDS sequence) NM_131333.1
    Accession Version NM_131333.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1035bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2019-11-09
    Organism Danio rerio(zebrafish)
    Product visual system homeobox 1
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AF025348.2. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: AF025348.2 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505392, SAMEA4476733 [ECO:0000348] ##Evidence-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    ATGACGGGAA GAGAAGAAGC TACAGATGAA AAACCTAAAG TTAAACTTTA CCCTTCGTTC 
    GGAATCGACA AATCACGTCT GAATGGATCT GGATTTCGGT CCAAAGGGTT CGCAATCACA 
    GATCTCCTGG GTCTGGAGTC GGAACTTCAG CCGCACCAGT CAGGTCCAGG CGCGGGGCCC 
    AATGGAGAGG GCCAGAGCGC GGCGGTTGGA GGATTTTCTT TCCCGGGAGG ATCTTTGCCC 
    TTGGGCTTGG GGTTTCTGTG TAGTTTGGCG GCGCAACAGC CTCCTGGAGC CCCGTGTTTT 
    CTCCCGAGCC ACATCCCTCT GTTGCAGTCA CGGACGGAGA GCCACTTCAT GCAGAATCTG 
    GAGCAGCAAA GGGACGTTTA CTCCGATGAT GACTGCCTTT CCGGTGATCG CAATGATGGA 
    AAAAACTCAG GGAACTCTCA AAAGAGGAAA AAGAGAAGGC ACAGGACAGT TTTCACCTCC 
    CATCAACTTG AGGAACTAGA GAAAGCCTTC AATGAAGCAC ACTATCCAGA CGTTTACGCG 
    AGAGAAATGC TGGCAATGAA GACAGAGCTA CCAGAGGACA GGATACAGGT ATGGTTTCAA 
    AACCGGCGTG CAAAGTGGAG GAAAAGGGAA AAGTGCTGGG GCCGTAGCAG CGTGATGGCA 
    GAGTATGGGC TGTATGGAGC CATGGTGCGC CACTCCATTC CACTCCCAGA ATCCATCATC 
    AACTCTGCCA AGAGCGGGAT GATGGGCTCA TGCGCTCCCT GGCTTCTAGG TGAGCCAGCA 
    GGAATGCACA AAAAGTCTAT GGAAATTGTG AAGAAAGCTC CTGGCACGCC TGAATCGACA 
    CATTCAGATA CATATTCAGA GGAACACAAA GGGAAAGACA GCGACACGAC ATGGTCAAGC 
    GGAGCTAATG GAGCGGACGA TTCAGAAGAC ATGGCAATAG ATTTGTCTAG CACTTCAAAA 
    CAAGAGAACA AAAGCACTTT GAAAAGATCT CCGCCTCGCA CAGAAAACAG CAGCGATTCT 
    GAAAATGAGA GTTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq NP_571408.1
    CDS31..1065
    Translation

    Target ORF information:

    RefSeq Version NM_131333.1
    Organism Danio rerio(zebrafish)
    Definition Danio rerio visual system homeobox 1 homolog, chx10-like (vsx1), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 NM_131333.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    ATGACGGGAA GAGAAGAAGC TACAGATGAA AAACCTAAAG TTAAACTTTA CCCTTCGTTC 
    GGAATCGACA AATCACGTCT GAATGGATCT GGATTTCGGT CCAAAGGGTT CGCAATCACA 
    GATCTCCTGG GTCTGGAGTC GGAACTTCAG CCGCACCAGT CAGGTCCAGG CGCGGGGCCC 
    AATGGAGAGG GCCAGAGCGC GGCGGTTGGA GGATTTTCTT TCCCGGGAGG ATCTTTGCCC 
    TTGGGCTTGG GGTTTCTGTG TAGTTTGGCG GCGCAACAGC CTCCTGGAGC CCCGTGTTTT 
    CTCCCGAGCC ACATCCCTCT GTTGCAGTCA CGGACGGAGA GCCACTTCAT GCAGAATCTG 
    GAGCAGCAAA GGGACGTTTA CTCCGATGAT GACTGCCTTT CCGGTGATCG CAATGATGGA 
    AAAAACTCAG GGAACTCTCA AAAGAGGAAA AAGAGAAGGC ACAGGACAGT TTTCACCTCC 
    CATCAACTTG AGGAACTAGA GAAAGCCTTC AATGAAGCAC ACTATCCAGA CGTTTACGCG 
    AGAGAAATGC TGGCAATGAA GACAGAGCTA CCAGAGGACA GGATACAGGT ATGGTTTCAA 
    AACCGGCGTG CAAAGTGGAG GAAAAGGGAA AAGTGCTGGG GCCGTAGCAG CGTGATGGCA 
    GAGTATGGGC TGTATGGAGC CATGGTGCGC CACTCCATTC CACTCCCAGA ATCCATCATC 
    AACTCTGCCA AGAGCGGGAT GATGGGCTCA TGCGCTCCCT GGCTTCTAGG TGAGCCAGCA 
    GGAATGCACA AAAAGTCTAT GGAAATTGTG AAGAAAGCTC CTGGCACGCC TGAATCGACA 
    CATTCAGATA CATATTCAGA GGAACACAAA GGGAAAGACA GCGACACGAC ATGGTCAAGC 
    GGAGCTAATG GAGCGGACGA TTCAGAAGAC ATGGCAATAG ATTTGTCTAG CACTTCAAAA 
    CAAGAGAACA AAAGCACTTT GAAAAGATCT CCGCCTCGCA CAGAAAACAG CAGCGATTCT 
    GAAAATGAGA GTTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    vsx1 ( XM_005158663.3 ) cDNA ORF clone, Danio rerio(zebrafish) -> XP_005158720.1 Danio rerio visual system homeobox 1 homolog, chx10-like (vsx1), transcript variant X1, mRNA.
    Price & Availability↑
    CloneID ODa22390
    Clone ID Related Accession (Same CDS sequence) XM_005158663.3 , XM_005158663.4
    Accession Version XM_005158663.3 Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1023bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2016-06-23
    Organism Danio rerio(Zebrafish)
    Product visual system homeobox 1 isoform X1
    Comment MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007128.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_005158663.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    ATGACGGGAA GAGAAGAAGC TACAGATGAA AAACCTAAAG TTAAACTTTA CCCTTCGTTC 
    GGAATCGACA AATCACGTCT GAATGGATCT GGATTTCGGT CCAAAGGGTT CGCAATCACA 
    GATCTCCTGG GTCTGGAGTC GGAACTTCAG CCGCACCAGT CAGGAACAGG CGCGGGGCCC 
    AATGGAGAGG GCCAGAGCGC GGCGGTTGGA GGATTTTCTT TCCCGGGAGG ATCTTTGCCC 
    TTGGGCTTGG GGTTTCTGTG TAGTTTGGCG GCGCAACAGC CTCCTGGGGC CCCATGTTTT 
    CTCCCGAGCC ACATCCCTCT GTTGCAGTCA CGGACGGAGA GCCACTTCAT GCAGAATCTG 
    GAGCAGCAAA GGGACGTTTA CTCCGATGAT GACTGCCTTT CCGGTGATCG CAATGATGGA 
    AAAAACTCAG GGAACTCTCA AAAGAGGAAA AAGAGAAGGC ACAGGACAGT TTTCACCTCC 
    CATCAACTTG AGGAACTAGA GAAAGCTTTC AATGAAGCAC ACTATCCAGA CGTTTACGCG 
    AGAGAAATGC TGGCAATGAA GACAGAGCTA CCAGAGGACA GGATACAGGT ATGGTTTCAA 
    AACCGGCGTG CAAAGTGGAG GAAGAGGGAA AAGTGCTGGG GCCGTAGCAG CGTGATGGCA 
    GAGTATGGGC TGTATGGAGC CATGGTGCGC CACTCCATTC CACTCCCAGA ATCCATCATC 
    AACTCTGCCA AGAGCGGGAT GATGGGCTCA TGCGCTCCCT GGCTTCTAGG AATGCACAAA 
    AAGTCTATGG AAATTGTGAA GAAAGCTCCT GGCACGCCTG AATCGACACA TTCAGATACA 
    TATTCAGAGG AACACAAAGG GAAAGACAGC GACACGACAT GGTCAAGCGG AGCTAATGGA 
    GCGGACGATT CAGAGGACAT GGCAATAGAT CTGTCTAGCA CTTCAAAACA AGAGAACAAA 
    AGCACTTTGA AAAGATCTCC GCCTCGCACA GAAAACAGCA GCGATTCTGA AAATGAGAGT 
    TAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_005158720.1
    CDS60..1082
    Translation

    Target ORF information:

    RefSeq Version XM_005158663.3
    Organism Danio rerio(Zebrafish)
    Definition Danio rerio visual system homeobox 1 homolog, chx10-like (vsx1), transcript variant X1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_005158663.3

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    ATGACGGGAA GAGAAGAAGC TACAGATGAA AAACCTAAAG TTAAACTTTA CCCTTCGTTC 
    GGAATCGACA AATCACGTCT GAATGGATCT GGATTTCGGT CCAAAGGGTT CGCAATCACA 
    GATCTCCTGG GTCTGGAGTC GGAACTTCAG CCGCACCAGT CAGGAACAGG CGCGGGGCCC 
    AATGGAGAGG GCCAGAGCGC GGCGGTTGGA GGATTTTCTT TCCCGGGAGG ATCTTTGCCC 
    TTGGGCTTGG GGTTTCTGTG TAGTTTGGCG GCGCAACAGC CTCCTGGGGC CCCATGTTTT 
    CTCCCGAGCC ACATCCCTCT GTTGCAGTCA CGGACGGAGA GCCACTTCAT GCAGAATCTG 
    GAGCAGCAAA GGGACGTTTA CTCCGATGAT GACTGCCTTT CCGGTGATCG CAATGATGGA 
    AAAAACTCAG GGAACTCTCA AAAGAGGAAA AAGAGAAGGC ACAGGACAGT TTTCACCTCC 
    CATCAACTTG AGGAACTAGA GAAAGCTTTC AATGAAGCAC ACTATCCAGA CGTTTACGCG 
    AGAGAAATGC TGGCAATGAA GACAGAGCTA CCAGAGGACA GGATACAGGT ATGGTTTCAA 
    AACCGGCGTG CAAAGTGGAG GAAGAGGGAA AAGTGCTGGG GCCGTAGCAG CGTGATGGCA 
    GAGTATGGGC TGTATGGAGC CATGGTGCGC CACTCCATTC CACTCCCAGA ATCCATCATC 
    AACTCTGCCA AGAGCGGGAT GATGGGCTCA TGCGCTCCCT GGCTTCTAGG AATGCACAAA 
    AAGTCTATGG AAATTGTGAA GAAAGCTCCT GGCACGCCTG AATCGACACA TTCAGATACA 
    TATTCAGAGG AACACAAAGG GAAAGACAGC GACACGACAT GGTCAAGCGG AGCTAATGGA 
    GCGGACGATT CAGAGGACAT GGCAATAGAT CTGTCTAGCA CTTCAAAACA AGAGAACAAA 
    AGCACTTTGA AAAGATCTCC GCCTCGCACA GAAAACAGCA GCGATTCTGA AAATGAGAGT 
    TAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    vsx1 ( XM_005158663.4 ) cDNA ORF clone, Danio rerio(zebrafish) -> XP_005158720.1 Danio rerio visual system homeobox 1 homolog, chx10-like (vsx1), transcript variant X1, mRNA.
    Price & Availability↑
    CloneID ODa22390
    Clone ID Related Accession (Same CDS sequence) XM_005158663.3 , XM_005158663.4
    Accession Version XM_005158663.4 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1023bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2017-06-14
    Organism Danio rerio(zebrafish)
    Product visual system homeobox 1 isoform X1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007128.7) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_005158663.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    ATGACGGGAA GAGAAGAAGC TACAGATGAA AAACCTAAAG TTAAACTTTA CCCTTCGTTC 
    GGAATCGACA AATCACGTCT GAATGGATCT GGATTTCGGT CCAAAGGGTT CGCAATCACA 
    GATCTCCTGG GTCTGGAGTC GGAACTTCAG CCGCACCAGT CAGGAACAGG CGCGGGGCCC 
    AATGGAGAGG GCCAGAGCGC GGCGGTTGGA GGATTTTCTT TCCCGGGAGG ATCTTTGCCC 
    TTGGGCTTGG GGTTTCTGTG TAGTTTGGCG GCGCAACAGC CTCCTGGGGC CCCATGTTTT 
    CTCCCGAGCC ACATCCCTCT GTTGCAGTCA CGGACGGAGA GCCACTTCAT GCAGAATCTG 
    GAGCAGCAAA GGGACGTTTA CTCCGATGAT GACTGCCTTT CCGGTGATCG CAATGATGGA 
    AAAAACTCAG GGAACTCTCA AAAGAGGAAA AAGAGAAGGC ACAGGACAGT TTTCACCTCC 
    CATCAACTTG AGGAACTAGA GAAAGCTTTC AATGAAGCAC ACTATCCAGA CGTTTACGCG 
    AGAGAAATGC TGGCAATGAA GACAGAGCTA CCAGAGGACA GGATACAGGT ATGGTTTCAA 
    AACCGGCGTG CAAAGTGGAG GAAGAGGGAA AAGTGCTGGG GCCGTAGCAG CGTGATGGCA 
    GAGTATGGGC TGTATGGAGC CATGGTGCGC CACTCCATTC CACTCCCAGA ATCCATCATC 
    AACTCTGCCA AGAGCGGGAT GATGGGCTCA TGCGCTCCCT GGCTTCTAGG AATGCACAAA 
    AAGTCTATGG AAATTGTGAA GAAAGCTCCT GGCACGCCTG AATCGACACA TTCAGATACA 
    TATTCAGAGG AACACAAAGG GAAAGACAGC GACACGACAT GGTCAAGCGG AGCTAATGGA 
    GCGGACGATT CAGAGGACAT GGCAATAGAT CTGTCTAGCA CTTCAAAACA AGAGAACAAA 
    AGCACTTTGA AAAGATCTCC GCCTCGCACA GAAAACAGCA GCGATTCTGA AAATGAGAGT 
    TAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_005158720.1
    CDS54..1076
    Translation

    Target ORF information:

    RefSeq Version XM_005158663.4
    Organism Danio rerio(zebrafish)
    Definition Danio rerio visual system homeobox 1 homolog, chx10-like (vsx1), transcript variant X1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_005158663.4

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    ATGACGGGAA GAGAAGAAGC TACAGATGAA AAACCTAAAG TTAAACTTTA CCCTTCGTTC 
    GGAATCGACA AATCACGTCT GAATGGATCT GGATTTCGGT CCAAAGGGTT CGCAATCACA 
    GATCTCCTGG GTCTGGAGTC GGAACTTCAG CCGCACCAGT CAGGAACAGG CGCGGGGCCC 
    AATGGAGAGG GCCAGAGCGC GGCGGTTGGA GGATTTTCTT TCCCGGGAGG ATCTTTGCCC 
    TTGGGCTTGG GGTTTCTGTG TAGTTTGGCG GCGCAACAGC CTCCTGGGGC CCCATGTTTT 
    CTCCCGAGCC ACATCCCTCT GTTGCAGTCA CGGACGGAGA GCCACTTCAT GCAGAATCTG 
    GAGCAGCAAA GGGACGTTTA CTCCGATGAT GACTGCCTTT CCGGTGATCG CAATGATGGA 
    AAAAACTCAG GGAACTCTCA AAAGAGGAAA AAGAGAAGGC ACAGGACAGT TTTCACCTCC 
    CATCAACTTG AGGAACTAGA GAAAGCTTTC AATGAAGCAC ACTATCCAGA CGTTTACGCG 
    AGAGAAATGC TGGCAATGAA GACAGAGCTA CCAGAGGACA GGATACAGGT ATGGTTTCAA 
    AACCGGCGTG CAAAGTGGAG GAAGAGGGAA AAGTGCTGGG GCCGTAGCAG CGTGATGGCA 
    GAGTATGGGC TGTATGGAGC CATGGTGCGC CACTCCATTC CACTCCCAGA ATCCATCATC 
    AACTCTGCCA AGAGCGGGAT GATGGGCTCA TGCGCTCCCT GGCTTCTAGG AATGCACAAA 
    AAGTCTATGG AAATTGTGAA GAAAGCTCCT GGCACGCCTG AATCGACACA TTCAGATACA 
    TATTCAGAGG AACACAAAGG GAAAGACAGC GACACGACAT GGTCAAGCGG AGCTAATGGA 
    GCGGACGATT CAGAGGACAT GGCAATAGAT CTGTCTAGCA CTTCAAAACA AGAGAACAAA 
    AGCACTTTGA AAAGATCTCC GCCTCGCACA GAAAACAGCA GCGATTCTGA AAATGAGAGT 
    TAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

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