Gene Symbol | LOC110437704 |
Entrez Gene ID | 110437704 |
Full Name | tripartite motif-containing protein 16-like |
Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
ORF » Species Summary » Danio rerio » LOC110437704 cDNA ORF clone
Gene Symbol | LOC110437704 |
Entrez Gene ID | 110437704 |
Full Name | tripartite motif-containing protein 16-like |
Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
mRNA | Protein | Name |
---|---|---|
XM_017352269.2 | XP_017207758.1 | tripartite motif-containing protein 16-like |
NM_001365968.1 | NP_001352897.1 | finTRIM family, member 24 |
XM_021471301.1 | XP_021326976.1 | tripartite motif-containing protein 16-like |
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)
Origin and evolution of TRIM proteins: new insights from the complete TRIM repertoire of zebrafish and pufferfish.
Boudinot P, van der Aa LM, Jouneau L, Du Pasquier L, Pontarotti P, Briolat V, Benmansour A, Levraud JP
PloS one6(7)e22022(2011)
A large new subset of TRIM genes highly diversified by duplication and positive selection in teleost fish.
van der Aa LM, Levraud JP, Yahmi M, Lauret E, Briolat V, Herbomel P, Benmansour A, Boudinot P
BMC biology77(2009 Feb)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following LOC110437704 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC110437704 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ODa56491 | |
Clone ID Related Accession (Same CDS sequence) | XM_017352269.2 , NM_001365968.1 , XM_021471301.1 | |
Accession Version | NM_001365968.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1677bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-07-20 | |
Organism | Danio rerio(zebrafish) | |
Product | finTRIM family, member 24 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BX548047.12. On or before Sep 19, 2018 this sequence version replaced XM_021471301.1, XM_017352269.2. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: GFIL01010898.1, GDQH01008796.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA2168446, SAMEA2168447 [ECO:0000350] ##Evidence-Data-END## |
1 | ATGGCAGAAG CCAATATTTC CGTGGCTGAG GATCAGTTCA ACTGTTCGAT CTGTCTGGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001352897.1 |
CDS | 140..1816 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001365968.1 |
1 | ATGGCAGAAG CCAATATTTC CGTGGCTGAG GATCAGTTCA ACTGTTCGAT CTGTCTGGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa56491 | |
Clone ID Related Accession (Same CDS sequence) | XM_017352269.2 , NM_001365968.1 , XM_021471301.1 | |
Accession Version | XM_017352269.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1677bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-06-14 | |
Organism | Danio rerio(zebrafish) | |
Product | tripartite motif-containing protein 16-like | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007113.7) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_017352269.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCAGAAG CCAATATTTC CGTGGCTGAG GATCAGTTCA ACTGTTCGAT CTGTCTGGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017207758.1 |
CDS | 130..1806 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017352269.2 |
1 | ATGGCAGAAG CCAATATTTC CGTGGCTGAG GATCAGTTCA ACTGTTCGAT CTGTCTGGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa56491 | |
Clone ID Related Accession (Same CDS sequence) | XM_017352269.2 , NM_001365968.1 , XM_021471301.1 | |
Accession Version | XM_021471301.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1677bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-06-14 | |
Organism | Danio rerio(zebrafish) | |
Product | tripartite motif-containing protein 16-like | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_018394514.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCAGAAG CCAATATTTC CGTGGCTGAG GATCAGTTCA ACTGTTCGAT CTGTCTGGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_021326976.1 |
CDS | 130..1806 |
Translation |
Target ORF information:
Target ORF information:
|
XM_021471301.1 |
1 | ATGGCAGAAG CCAATATTTC CGTGGCTGAG GATCAGTTCA ACTGTTCGAT CTGTCTGGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. |
Origin and evolution of TRIM proteins: new insights from the complete TRIM repertoire of zebrafish and pufferfish. |
A large new subset of TRIM genes highly diversified by duplication and positive selection in teleost fish. |