COL6A1 cDNA ORF clone, Corvus cornix cornix

Gene
Clones
gRNAs

Summary

Gene Symbol	COL6A1
Entrez Gene ID	104694607
Full Name	collagen type VI alpha 1 chain
Gene Type	protein-coding
Organism	Corvus cornix cornix

mRNA and Protein(s)

mRNA	Protein	Name
XM_020585094.1	XP_020440683.1	collagen alpha-1(VI) chain

Pathways from BioSystems
Gene Ontology

The following COL6A1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the COL6A1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OCo109984	XM_020585094.1 Latest version!	Corvus cornix cornix collagen type VI alpha 1 chain (COL6A1), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$475.30 $679.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

COL6A1 ( XM_020585094.1 ) cDNA ORF clone, Corvus cornix cornix -> XP_020440683.1 Corvus cornix cornix collagen type VI alpha 1 chain (COL6A1), mRNA.

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CloneID	OCo109984
Clone ID Related Accession (Same CDS sequence)	XM_020585094.1
Accession Version	XM_020585094.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2877bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-03-21
Organism	Corvus cornix cornix
Product	collagen alpha-1(VI) chain
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_018114049.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Corvus cornix cornix Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 1% of CDS bases ##RefSeq-Attributes-END##

ATGAGGCTGC GAGACTTTCT GCTCACTCTG CTGCTCCCGG CCGGCTTCCT GTGGGGGGGC 
TCATGTGCTC AGCGCCCAGA AATCATCACC CAGGTCTCAA GCGCAGAAGA CTGCCCTGTG 
GACCTGTTCT TCGTCCTGGA CACCTCAGAG AGCGTTGCCC TGAGGGTGAA GCCCTTTGGG 
GACCTGGTTA CCCAAGTGAA GGATTTCACC AACCGGTTCA TTGATAAGCT GACCCAGAGG 
TACTACCGCT GCGACCGCAA CCTGGTGTGG AACGCGGGAG CGCTGCACTA CAGCGACGAG 
GTGGTGCTCA TCAAGGGCCT GACGCCGATG CCCAGCGGGC AGAGCGAGCT GAAGAACCGC 
GTGTCATCCA TCAACTACAT CGGGAAGGGC ACCTACACCG ACTGCGCCAT AAAGCGCGGC 
ATCGAGGAGC TGCTCATCGG GGGTTCCCAT CACAAGGAGA ATAAATACCT GATCGTGGTG 
ACTGATGGAC ACCCCTTGGA AGGTTACAAG GAGCCCTGTG GGGGCCTGGA TGATGCTGCC 
AACGAAGCCA AACTCTTGGG GATCAAACCT TCTGTGCAGT GCTGCTCCTT CGAGTGCCAG 
CCTCCCCGAG GGCCCCCTGG ACCTGCTGGT GACCCAGGCC ATGAGGGAGA ACGAGGCAAG 
CCAGGTCTTC CCGGCCAGAA AGGAGAGGCT GGAGACCCAG GCAGGCCAGG AGACATGGGA 
CCTGCTGGCT ACCAAGGAAT GAAGGGTGAC AAAGGAAGCC GAGGAGAGAA GGGCTCAAGA 
GGAGCCAAAG GAGCCAAGGG TGAGAAAGGC AGGCGTGGAA TCGATGGCAT CGATGGCATG 
AAGGGTGAAG CTGGATACCC CGGATTACCT GGCTGCAAAG GCTCACCTGG ATTCGACGGA 
GCTCAAGGCC CACCCGGACC AAAGGGAGAT CCCGGTGCTT TTGGACCCAA GGGAGCAAAG 
GGGGAGCCTG GGAATGACGG AAAGCCTGGC CGACAGGGGA TTCCTGGCAA CCCTGGAGAG 
AAGGGCGCTC CTGGGAACCA GGGTGAGCCT GGACCAGCAG GAGAGACTGG TGACGAGGGT 
GCTCCAGGTG AGGATGGTCC TCCTGGAGAA CGGGGCACCA ATGGAGAGAG AGGAGCCCCG 
GGCTCGCCGG GTGACCGCGG GCCGAGAGGA GAGCTGGGAG AGCCCGGACC ACCTGGTGAC 
CAAGGGCGGG AAGGACCCCC TGGACCACCT GGCGACCAGG GTGAGCCCGG ACCCCCAGGA 
CCCAAAGGCT ACAGGGGAGA TGACGGCCCC CCCGGCAGTG AGGGCCCAAA GGGATTGCCT 
GGAGCTCCTG GGCTGCCTGG AGACCCTGGG CTGATGGGAG AAAGGGGGGA GGATGGTCCT 
CCTGGGAACG GCACAATTGG ATTCACAGGT GCCCCAGGGC AGCCAGGAGA CAGAGGCAAC 
CCTGGCACTA ACGGAACAAA AGGCTATGTC GGACCTAAAG GTGATGAAGG AGAAGCTGGC 
GACCCTGGCA ATGATGTGAG TAACCTGTGC AATGCTGACT CCTCTCTGCC TGGACCACCA 
GGACCTGTGG GGCCTCCAGG ACCAGATGAA TGTGAAATCT TGGACATCAT CATGAAGATG 
TGCTCTTGCT GCGAGTGCAC CTGTGGTCCC GTCGACCTCC TGTTTGTGTT GGACAGCTCG 
GAGAGCATTG GCCTGCAGAA CTTCCAGATT GCCAAGGACT TCATCATCAA AGTCATCGAC 
CGCCTGAGCA AGGACGAGCG GGTCAAGTTT GAACCTGGAG AGTCCCGTGT GGGTGTTGTG 
CAGTACAGCC ATGACAACAC ACAGGAGCTG GTGGCCATGG GGGATGCCAA CATCGACAAC 
ATTGGGGCAC TCAAGCAGGC AGTCAAGAAC CTGCAGTGGA TCGCTGGGGG CACCTACACT 
GGGGAGGCCC TGCAGTTCAC CAAGGACAAC CTGCTGCGGA GGTTCACGTC CGACAAGCGC 
GTGGCCATCG TCATCACGGA CGGGCGCTCC GACACCCTGC GGGACCCCAC CCCACTCAAC 
TCCCTGTGCG ATGTCACCCC GGTGGTTTCC CTTGGAATAG GTGACATTTT CCGGAACCCA 
CCAAATCCAG ATCACCTGAA TGACATCGCT TGTTTAAGCA GACCGACCAG GCCGGGACTG 
TCCATTCAAA GGGACAATTA TGCCGAGCTC CTGGATGACA CCTTCTTGCA GAACATCACC 
TCATATGTCT GCCAAGAGAA GAAATGTCCT GACTACACCT GCCCAATCAC CTTCACCGAG 
CCAGCAGACA TCACGCTGCT GGTGGACAGC TCCACCAGTG TGGGGAGCAA GAACTTTGAG 
ACCACCAAGA AGTTTGTGAA GCGGCTGGCA GGGCGGTTCC TGGAGGCCGG CAAGCCCGCC 
GACGACTCCG TGCGCATCTC GGTGGTGCAG TACAGCAGCC GGAACCAGCA GAAAGTGGAA 
GCTCAGTTCC TGTACAACTA CACGGTCATT GCCAAGGCCA TTGACAACAT GGAGTTTATG 
AATGACGCCA CGGACGTGAA CTCTGCTCTG CAGTTCATCA CAGAGCTGTA CCGGCGCTCC 
GCCCGCGCCG TGGCCAAGAA GAGGGTGCTG GTGTTTTCTG ACGGACACTC CCAAGGGATC 
ACTGCCAGGG CCATCGAGAG GGCTGTGCAG GACGCACAGA AGGCTAACAT CGAGATCTAC 
GTGCTGGCAG TGGGCAGCCA AGCCAACGAG CCAAACATCC GTGTCCTGGT CACGGGAAAG 
AGCGCGGATT ACGACGTGGC CTATGGGGAG CGGCACCTTT TCCGCGTGCC CGACTACACC 
TCTCTGCTGC GTGGTGTCTT CTACCAAACT GTGTCCAGGA AGATAGCTGT TGACTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_020440683.1
CDS	208..3084
Translation	MRLRDFLLTLLLPAGFLWGGSCAQRPEIITQVSSAEDCPVDLFFVLDTSESVALRVKPFGDLVTQVKDFTNRFIDKLTQRYYRCDRNLVWNAGALHYSDEVVLIKGLTPMPSGQSELKNRVSSINYIGKGTYTDCAIKRGIEELLIGGSHHKENKYLIVVTDGHPLEGYKEPCGGLDDAANEAKLLGIKPSVQCCSFECQPPRGPPGPAGDPGHEGERGKPGLPGQKGEAGDPGRPGDMGPAGYQGMKGDKGSRGEKGSRGAKGAKGEKGRRGIDGIDGMKGEAGYPGLPGCKGSPGFDGAQGPPGPKGDPGAFGPKGAKGEPGNDGKPGRQGIPGNPGEKGAPGNQGEPGPAGETGDEGAPGEDGPPGERGTNGERGAPGSPGDRGPRGELGEPGPPGDQGREGPPGPPGDQGEPGPPGPKGYRGDDGPPGSEGPKGLPGAPGLPGDPGLMGERGEDGPPGNGTIGFTGAPGQPGDRGNPGTNGTKGYVGPKGDEGEAGDPGNDVSNLCNADSSLPGPPGPVGPPGPDECEILDIIMKMCSCCECTCGPVDLLFVLDSSESIGLQNFQIAKDFIIKVIDRLSKDERVKFEPGESRVGVVQYSHDNTQELVAMGDANIDNIGALKQAVKNLQWIAGGTYTGEALQFTKDNLLRRFTSDKRVAIVITDGRSDTLRDPTPLNSLCDVTPVVSLGIGDIFRNPPNPDHLNDIACLSRPTRPGLSIQRDNYAELLDDTFLQNITSYVCQEKKCPDYTCPITFTEPADITLLVDSSTSVGSKNFETTKKFVKRLAGRFLEAGKPADDSVRISVVQYSSRNQQKVEAQFLYNYTVIAKAIDNMEFMNDATDVNSALQFITELYRRSARAVAKKRVLVFSDGHSQGITARAIERAVQDAQKANIEIYVLAVGSQANEPNIRVLVTGKSADYDVAYGERHLFRVPDYTSLLRGVFYQTVSRKIAVD

Target ORF information:

RefSeq Version	XM_020585094.1
Organism	Corvus cornix cornix
Definition	Corvus cornix cornix collagen type VI alpha 1 chain (COL6A1), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_020585094.1

ORF Insert Sequence:

ATGAGGCTGC GAGACTTTCT GCTCACTCTG CTGCTCCCGG CCGGCTTCCT GTGGGGGGGC 
TCATGTGCTC AGCGCCCAGA AATCATCACC CAGGTCTCAA GCGCAGAAGA CTGCCCTGTG 
GACCTGTTCT TCGTCCTGGA CACCTCAGAG AGCGTTGCCC TGAGGGTGAA GCCCTTTGGG 
GACCTGGTTA CCCAAGTGAA GGATTTCACC AACCGGTTCA TTGATAAGCT GACCCAGAGG 
TACTACCGCT GCGACCGCAA CCTGGTGTGG AACGCGGGAG CGCTGCACTA CAGCGACGAG 
GTGGTGCTCA TCAAGGGCCT GACGCCGATG CCCAGCGGGC AGAGCGAGCT GAAGAACCGC 
GTGTCATCCA TCAACTACAT CGGGAAGGGC ACCTACACCG ACTGCGCCAT AAAGCGCGGC 
ATCGAGGAGC TGCTCATCGG GGGTTCCCAT CACAAGGAGA ATAAATACCT GATCGTGGTG 
ACTGATGGAC ACCCCTTGGA AGGTTACAAG GAGCCCTGTG GGGGCCTGGA TGATGCTGCC 
AACGAAGCCA AACTCTTGGG GATCAAACCT TCTGTGCAGT GCTGCTCCTT CGAGTGCCAG 
CCTCCCCGAG GGCCCCCTGG ACCTGCTGGT GACCCAGGCC ATGAGGGAGA ACGAGGCAAG 
CCAGGTCTTC CCGGCCAGAA AGGAGAGGCT GGAGACCCAG GCAGGCCAGG AGACATGGGA 
CCTGCTGGCT ACCAAGGAAT GAAGGGTGAC AAAGGAAGCC GAGGAGAGAA GGGCTCAAGA 
GGAGCCAAAG GAGCCAAGGG TGAGAAAGGC AGGCGTGGAA TCGATGGCAT CGATGGCATG 
AAGGGTGAAG CTGGATACCC CGGATTACCT GGCTGCAAAG GCTCACCTGG ATTCGACGGA 
GCTCAAGGCC CACCCGGACC AAAGGGAGAT CCCGGTGCTT TTGGACCCAA GGGAGCAAAG 
GGGGAGCCTG GGAATGACGG AAAGCCTGGC CGACAGGGGA TTCCTGGCAA CCCTGGAGAG 
AAGGGCGCTC CTGGGAACCA GGGTGAGCCT GGACCAGCAG GAGAGACTGG TGACGAGGGT 
GCTCCAGGTG AGGATGGTCC TCCTGGAGAA CGGGGCACCA ATGGAGAGAG AGGAGCCCCG 
GGCTCGCCGG GTGACCGCGG GCCGAGAGGA GAGCTGGGAG AGCCCGGACC ACCTGGTGAC 
CAAGGGCGGG AAGGACCCCC TGGACCACCT GGCGACCAGG GTGAGCCCGG ACCCCCAGGA 
CCCAAAGGCT ACAGGGGAGA TGACGGCCCC CCCGGCAGTG AGGGCCCAAA GGGATTGCCT 
GGAGCTCCTG GGCTGCCTGG AGACCCTGGG CTGATGGGAG AAAGGGGGGA GGATGGTCCT 
CCTGGGAACG GCACAATTGG ATTCACAGGT GCCCCAGGGC AGCCAGGAGA CAGAGGCAAC 
CCTGGCACTA ACGGAACAAA AGGCTATGTC GGACCTAAAG GTGATGAAGG AGAAGCTGGC 
GACCCTGGCA ATGATGTGAG TAACCTGTGC AATGCTGACT CCTCTCTGCC TGGACCACCA 
GGACCTGTGG GGCCTCCAGG ACCAGATGAA TGTGAAATCT TGGACATCAT CATGAAGATG 
TGCTCTTGCT GCGAGTGCAC CTGTGGTCCC GTCGACCTCC TGTTTGTGTT GGACAGCTCG 
GAGAGCATTG GCCTGCAGAA CTTCCAGATT GCCAAGGACT TCATCATCAA AGTCATCGAC 
CGCCTGAGCA AGGACGAGCG GGTCAAGTTT GAACCTGGAG AGTCCCGTGT GGGTGTTGTG 
CAGTACAGCC ATGACAACAC ACAGGAGCTG GTGGCCATGG GGGATGCCAA CATCGACAAC 
ATTGGGGCAC TCAAGCAGGC AGTCAAGAAC CTGCAGTGGA TCGCTGGGGG CACCTACACT 
GGGGAGGCCC TGCAGTTCAC CAAGGACAAC CTGCTGCGGA GGTTCACGTC CGACAAGCGC 
GTGGCCATCG TCATCACGGA CGGGCGCTCC GACACCCTGC GGGACCCCAC CCCACTCAAC 
TCCCTGTGCG ATGTCACCCC GGTGGTTTCC CTTGGAATAG GTGACATTTT CCGGAACCCA 
CCAAATCCAG ATCACCTGAA TGACATCGCT TGTTTAAGCA GACCGACCAG GCCGGGACTG 
TCCATTCAAA GGGACAATTA TGCCGAGCTC CTGGATGACA CCTTCTTGCA GAACATCACC 
TCATATGTCT GCCAAGAGAA GAAATGTCCT GACTACACCT GCCCAATCAC CTTCACCGAG 
CCAGCAGACA TCACGCTGCT GGTGGACAGC TCCACCAGTG TGGGGAGCAA GAACTTTGAG 
ACCACCAAGA AGTTTGTGAA GCGGCTGGCA GGGCGGTTCC TGGAGGCCGG CAAGCCCGCC 
GACGACTCCG TGCGCATCTC GGTGGTGCAG TACAGCAGCC GGAACCAGCA GAAAGTGGAA 
GCTCAGTTCC TGTACAACTA CACGGTCATT GCCAAGGCCA TTGACAACAT GGAGTTTATG 
AATGACGCCA CGGACGTGAA CTCTGCTCTG CAGTTCATCA CAGAGCTGTA CCGGCGCTCC 
GCCCGCGCCG TGGCCAAGAA GAGGGTGCTG GTGTTTTCTG ACGGACACTC CCAAGGGATC 
ACTGCCAGGG CCATCGAGAG GGCTGTGCAG GACGCACAGA AGGCTAACAT CGAGATCTAC 
GTGCTGGCAG TGGGCAGCCA AGCCAACGAG CCAAACATCC GTGTCCTGGT CACGGGAAAG 
AGCGCGGATT ACGACGTGGC CTATGGGGAG CGGCACCTTT TCCGCGTGCC CGACTACACC 
TCTCTGCTGC GTGGTGTCTT CTACCAAACT GTGTCCAGGA AGATAGCTGT TGACTGA