Gene Symbol | sdn-1 |
Entrez Gene ID | 181259 |
Full Name | Probable syndecan |
Gene Type | protein-coding |
Organism | Caenorhabditis elegans |
ORF » Species Summary » Caenorhabditis elegans » sdn-1 cDNA ORF clone
Gene Symbol | sdn-1 |
Entrez Gene ID | 181259 |
Full Name | Probable syndecan |
Gene Type | protein-coding |
Organism | Caenorhabditis elegans |
mRNA | Protein | Name |
---|---|---|
NM_171972.4 | NP_741894.1 | Probable syndecan |
NM_171972.6 | NP_741894.1 | Probable syndecan |
NM_171769.5 | NP_741893.1 | Syndecan |
NM_171769.3 | NP_741893.1 | Syndecan |
Genome sequence of the nematode C. elegans: a platform for investigating biology.
Science (New York, N.Y.)282(5396)2012-8(1998 Dec)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
SDN-1 controls cell migration in nervous system in coordination with Wnt signaling.
Title: Coordination of Heparan Sulfate Proteoglycans with Wnt Signaling To Control Cellular Migrations and Positioning in
The sdn-1 mutants showed QR descendant AQR anterior migration defects, and weaker QL descendant PQR migration defects.
Title: SDN-1/Syndecan Acts in Parallel to the Transmembrane Molecule MIG-13 to Promote Anterior Neuroblast Migration.
SDN-1 is required for precise orientation of the mitotic spindle in response to a Wnt cue in development.
Title: Syndecan defines precise spindle orientation by modulating Wnt signaling in C. elegans.
Syndecan's core protein, not its sugar chains, mediates growth cone stabilization. Syndecan also functions in axon guidance via its sugar chains.
Title: Syndecan promotes axon regeneration by stabilizing growth cone migration.
SDN-1 affects UNC-5 function by regulating the proper extracellular distribution of growth factors
Title: SDN-1/syndecan regulates growth factor signaling in distal tip cell migrations in C. elegans.
The following sdn-1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the sdn-1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OCa348991 | |
Clone ID Related Accession (Same CDS sequence) | NM_171769.5 , NM_171769.3 | |
Accession Version | NM_171769.5 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 864bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-17 | |
Organism | Caenorhabditis elegans | |
Product | Syndecan | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003284). On Oct 18, 2019 this sequence version replaced NM_171769.4. |
1 | ATGATTCTGA AACTCAATTT CTGCCTGTCG ACTTACTCGG TCCTCATTCT CCTATCCTTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_741893.1 |
CDS | 57..920 |
Translation |
Target ORF information:
Target ORF information:
|
NM_171769.5 |
1 | ATGATTCTGA AACTCAATTT CTGCCTGTCG ACTTACTCGG TCCTCATTCT CCTATCCTTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OCa350215 | |
Clone ID Related Accession (Same CDS sequence) | NM_171972.4 , NM_171972.6 | |
Accession Version | NM_171972.6 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 867bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-17 | |
Organism | Caenorhabditis elegans | |
Product | Probable syndecan | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003284). On Oct 18, 2019 this sequence version replaced NM_171972.5. |
1 | ATGATTCTGA AACTCAATTT CTGCCTGTCG ACTTACTCGG TCCTCATTCT CCTATCCTTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_741894.1 |
CDS | 57..923 |
Translation |
Target ORF information:
Target ORF information:
|
NM_171972.6 |
1 | ATGATTCTGA AACTCAATTT CTGCCTGTCG ACTTACTCGG TCCTCATTCT CCTATCCTTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OCa348991 | |
Clone ID Related Accession (Same CDS sequence) | NM_171769.5 , NM_171769.3 | |
Accession Version | NM_171769.3 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 864bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-08 | |
Organism | Caenorhabditis elegans | |
Product | Syndecan | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003284). On Jun 26, 2012 this sequence version replaced NM_171769.2. COMPLETENESS: incomplete on both ends. |
1 | ATGATTCTGA AACTCAATTT CTGCCTGTCG ACTTACTCGG TCCTCATTCT CCTATCCTTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_741893.1 |
CDS | 1..864 |
Translation |
Target ORF information:
Target ORF information:
|
NM_171769.3 |
1 | ATGATTCTGA AACTCAATTT CTGCCTGTCG ACTTACTCGG TCCTCATTCT CCTATCCTTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OCa350215 | |
Clone ID Related Accession (Same CDS sequence) | NM_171972.4 , NM_171972.6 | |
Accession Version | NM_171972.4 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 867bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-08 | |
Organism | Caenorhabditis elegans | |
Product | Probable syndecan | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003284). On Jun 26, 2012 this sequence version replaced NM_171972.3. COMPLETENESS: incomplete on both ends. |
1 | ATGATTCTGA AACTCAATTT CTGCCTGTCG ACTTACTCGG TCCTCATTCT CCTATCCTTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_741894.1 |
CDS | 1..867 |
Translation |
Target ORF information:
Target ORF information:
|
NM_171972.4 |
1 | ATGATTCTGA AACTCAATTT CTGCCTGTCG ACTTACTCGG TCCTCATTCT CCTATCCTTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Genome sequence of the nematode C. elegans: a platform for investigating biology. |