Gene Symbol | asd-1 |
Entrez Gene ID | 175542 |
Full Name | hypothetical protein |
Gene Type | protein-coding |
Organism | Caenorhabditis elegans |
ORF » Species Summary » Caenorhabditis elegans » asd-1 cDNA ORF clone
Gene Symbol | asd-1 |
Entrez Gene ID | 175542 |
Full Name | hypothetical protein |
Gene Type | protein-coding |
Organism | Caenorhabditis elegans |
mRNA | Protein | Name |
---|---|---|
NM_065440.5 | NP_497841.1 | hypothetical protein |
NM_001306717.1 | NP_001293646.1 | hypothetical protein |
NM_001373867.1 | NP_001359660.1 | RRM domain-containing protein |
NM_181938.4 | NP_871667.1 | hypothetical protein |
NM_065440.6 | NP_497841.1 | RRM domain-containing protein |
NM_001306717.2 | NP_001293646.1 | RRM domain-containing protein |
Genome sequence of the nematode C. elegans: a platform for investigating biology.
Science (New York, N.Y.)282(5396)2012-8(1998 Dec)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
Here we combine RNA-seq with in vitro binding assays to study how 4 different C. elegans SFs, ASD-1, FOX-1, MEC-8, and EXC-7, regulate splicing. The 4 SFs chosen all have well-characterised biology and well-studied loss-of-function genetic alleles, and all contain RRM domains
Title: The combinatorial control of alternative splicing in C. elegans.
Determined is the solution structure of a ternary complex of the RNA-recognition motif (RRM) domains from the RBFOX protein ASD-1, SUP-12 and their target RNA from egl-15.
Title: RBFOX and SUP-12 sandwich a G base to cooperatively regulate tissue-specific splicing.
The following asd-1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the asd-1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OCa352327 | |
Clone ID Related Accession (Same CDS sequence) | NM_065440.5 , NM_065440.6 | |
Accession Version | NM_065440.5 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1215bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-09 | |
Organism | Caenorhabditis elegans | |
Product | hypothetical protein | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003281). On Jun 26, 2012 this sequence version replaced NM_065440.4. COMPLETENESS: incomplete on both ends. |
1 | ATGACAACGG CGGCTGAAAT AATAACAGTG GAAAAATTAA ACGATTTCGA CTATAAAGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_497841.1 |
CDS | 1..1215 |
Translation |
Target ORF information:
Target ORF information:
|
NM_065440.5 |
1 | ATGACAACGG CGGCTGAAAT AATAACAGTG GAAAAATTAA ACGATTTCGA CTATAAAGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OCa352327 | |
Clone ID Related Accession (Same CDS sequence) | NM_065440.5 , NM_065440.6 | |
Accession Version | NM_065440.6 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1215bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-17 | |
Organism | Caenorhabditis elegans | |
Product | RRM domain-containing protein | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003281). On Sep 4, 2019 this sequence version replaced NM_065440.5. |
1 | ATGACAACGG CGGCTGAAAT AATAACAGTG GAAAAATTAA ACGATTTCGA CTATAAAGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_497841.1 |
CDS | 14..1228 |
Translation |
Target ORF information:
Target ORF information:
|
NM_065440.6 |
1 | ATGACAACGG CGGCTGAAAT AATAACAGTG GAAAAATTAA ACGATTTCGA CTATAAAGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OCa352328 | |
Clone ID Related Accession (Same CDS sequence) | NM_001306717.1 , NM_001306717.2 | |
Accession Version | NM_001306717.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1140bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-09 | |
Organism | Caenorhabditis elegans | |
Product | hypothetical protein | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003281). COMPLETENESS: incomplete on both ends. |
1 | ATGGTAGCTG CTCAAAATGG AGCTGCCGCC GCTGTGCTCC GACCACATCA AATCGGATCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001293646.1 |
CDS | 1..1140 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001306717.1 |
1 | ATGGTAGCTG CTCAAAATGG AGCTGCCGCC GCTGTGCTCC GACCACATCA AATCGGATCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OCa352328 | |
Clone ID Related Accession (Same CDS sequence) | NM_001306717.1 , NM_001306717.2 | |
Accession Version | NM_001306717.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1140bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-17 | |
Organism | Caenorhabditis elegans | |
Product | RRM domain-containing protein | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003281). On Sep 4, 2019 this sequence version replaced NM_001306717.1. COMPLETENESS: incomplete on the 5' end. |
1 | ATGGTAGCTG CTCAAAATGG AGCTGCCGCC GCTGTGCTCC GACCACATCA AATCGGATCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001293646.1 |
CDS | 1..1140 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001306717.2 |
1 | ATGGTAGCTG CTCAAAATGG AGCTGCCGCC GCTGTGCTCC GACCACATCA AATCGGATCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OCa352329 | |
Clone ID Related Accession (Same CDS sequence) | NM_001373867.1 , NM_181938.4 | |
Accession Version | NM_001373867.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 861bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-17 | |
Organism | Caenorhabditis elegans | |
Product | RRM domain-containing protein | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003281). |
1 | ATGTTTGAAA AAGTTGGGCC CGTCGTAGAT GTCGAGATTA TCTTCAATGA ACGGGGTTCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001359660.1 |
CDS | 364..1224 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001373867.1 |
1 | ATGTTTGAAA AAGTTGGGCC CGTCGTAGAT GTCGAGATTA TCTTCAATGA ACGGGGTTCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OCa352329 | |
Clone ID Related Accession (Same CDS sequence) | NM_001373867.1 , NM_181938.4 | |
Accession Version | NM_181938.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 861bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-09 | |
Organism | Caenorhabditis elegans | |
Product | hypothetical protein | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003281). On Jun 26, 2012 this sequence version replaced NM_181938.3. COMPLETENESS: incomplete on both ends. |
1 | ATGTTTGAAA AAGTTGGGCC CGTCGTAGAT GTCGAGATTA TCTTCAATGA ACGGGGTTCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_871667.1 |
CDS | 1..861 |
Translation |
Target ORF information:
Target ORF information:
|
NM_181938.4 |
1 | ATGTTTGAAA AAGTTGGGCC CGTCGTAGAT GTCGAGATTA TCTTCAATGA ACGGGGTTCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Genome sequence of the nematode C. elegans: a platform for investigating biology. |