rnt-1 cDNA ORF clone, Caenorhabditis elegans

Gene
Clones
gRNAs

Summary

Gene Symbol	rnt-1
Entrez Gene ID	172243
Full Name	RuNT related
Gene Type	protein-coding
Organism	Caenorhabditis elegans

mRNA and Protein(s)

mRNA	Protein	Name
NM_059278.5	NP_491679.1	RuNT related
NM_059278.6	NP_491679.1	Runt domain-containing protein

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Genome sequence of the nematode C. elegans: a platform for investigating biology.

Science (New York, N.Y.)282(5396)2012-8(1998 Dec)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

rnt-1 is regulated at the protein level for its role in the immediate response to environmental challenges in the intestine.
Title: Stabilization of RNT-1 protein, runt-related transcription factor (RUNX) protein homolog of Caenorhabditis elegans, by oxidative stress through mitogen-activated protein kinase pathway.

indicate that BRO-1 and RNT-1 form a cell proliferation-promoting complex, and that BRO-1 increases both the affinity and specificity of RNT-1-DNA interactions
Title: The C. elegans CBFbeta homologue BRO-1 interacts with the Runx factor, RNT-1, to promote stem cell proliferation and self-renewal.

rnt-1, encoded by male abnormal 2 (mab-2), is a rate-limiting regulator of stem cell-like lateral hypodermal (seam) cell proliferation in C. elegans
Title: mab-2 encodes RNT-1, a C. elegans Runx homologue essential for controlling cell proliferation in a stem cell-like developmental lineage.

RNT-1/MAB-2 functions with POP-1 to control the asymmetry of the T cell division.
Title: The C. elegans RUNX transcription factor RNT-1/MAB-2 is required for asymmetrical cell division of the T blast cell.

Data suggest that RNT-1 functionally cooperates with the SMA-4 proteins to regulate body size and male tail development in C. elegans.
Title: RNT-1, the C. elegans homologue of mammalian RUNX transcription factors, regulates body size and male tail development.

The following rnt-1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the rnt-1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)
OCa336358	NM_059278.6 Latest version!	Caenorhabditis elegans Runt domain-containing protein (rnt-1), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$139.30 $199.00
View Old Accession Versions >>
OCa336358	NM_059278.5	Caenorhabditis elegans RuNT related (rnt-1), partial mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$174.30 $249.00
Hide Old Accession Versions >>

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

rnt-1 ( NM_059278.5 ) cDNA ORF clone, Caenorhabditis elegans -> NP_491679.1 Caenorhabditis elegans RuNT related (rnt-1), partial mRNA.

Price & Availability↑

CloneID	OCa336358
Clone ID Related Accession (Same CDS sequence)	NM_059278.5 , NM_059278.6
Accession Version	NM_059278.5	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 906bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-08
Organism	Caenorhabditis elegans
Product	RuNT related
Comment	Comment: REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003279). On Jun 26, 2012 this sequence version replaced NM_059278.4. COMPLETENESS: incomplete on both ends.

ATGACCAACG TCTTCCATCA CGTTCGGAAT TTTATAGAGC AACAACCTGC ACCTGCTAAA 
ACATTAGAGA AATCATCATC TCCAAACATT TTATACACAG CTCTTCCGAA GCATTGGAGA 
TCAAATAAAT CATTTCAAGA ACCATTTTAT GTTGTATTAC TAACGCCTGT TCCAGATAAT 
ACAGAAGTAT CAATTTGGGC TGGAAATGAC GAAAAACCAT GCGAAGAAGT TCGAAATGAG 
AAAGCAAAAG TGCATCGACA AGTGGCAAAA TTTAACGATT TGCGGTTTGT CGGGCGGTCC 
GGCAGAGGCC GAAAATTCCA TTTGACAATC GTTATACATT CGGCGCCGAT GATGGTGGCC 
ACCGTCAAAA ATGTGATCAA GGTTACGGTT GATGGACCAA GGGATGCGAG AATACCAAAA 
CCACAAGGAT CTTTGAAACG GCAGGCAGAA CAGCAGACAA TATTCCCAAA TGATATTATC 
CGAACGCCTG GACCACCGAT GCCAATGACA ATGATTCCAC CACCATGGTT TCCTTTACCA 
ATGACTCAAA CTTTCCCCCC ATCATTTTTT CCGCTTATCT CTCCAGGACC ACATCCTTCT 
ATCTCAGCTG CACTTTGGAA AATTCACAGC GAATCGATGA AAACTCCGAT TAAACAAAAA 
GTTGAACAGG AAAATGTATC CCTTAATACG TCTACATGCC TATCATCTCC ATCAATTTTT 
ATAACTCCAA CTTCTGATGA TCGGAAGTTA AAACGACCAT CTTCTCCTCG TTCAATCACA 
AAATCATCAG AAACTTCAAT TAATTTAATT CAAGAAACTC CGGAATCTGT AGAATCAAAA 
AGACGAAGAA ATGTATCAAT AACTTCATCG AATAGTTCTT CTCCGACTAT TTGGAGGCCT 
TTTTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_491679.1
CDS	1..906
Translation	MTNVFHHVRNFIEQQPAPAKTLEKSSSPNILYTALPKHWRSNKSFQEPFYVVLLTPVPDNTEVSIWAGNDEKPCEEVRNEKAKVHRQVAKFNDLRFVGRSGRGRKFHLTIVIHSAPMMVATVKNVIKVTVDGPRDARIPKPQGSLKRQAEQQTIFPNDIIRTPGPPMPMTMIPPPWFPLPMTQTFPPSFFPLISPGPHPSISAALWKIHSESMKTPIKQKVEQENVSLNTSTCLSSPSIFITPTSDDRKLKRPSSPRSITKSSETSINLIQETPESVESKRRRNVSITSSNSSSPTIWRPF

Target ORF information:

RefSeq Version	NM_059278.5
Organism	Caenorhabditis elegans
Definition	Caenorhabditis elegans RuNT related (rnt-1), partial mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_059278.5

ORF Insert Sequence:

ATGACCAACG TCTTCCATCA CGTTCGGAAT TTTATAGAGC AACAACCTGC ACCTGCTAAA 
ACATTAGAGA AATCATCATC TCCAAACATT TTATACACAG CTCTTCCGAA GCATTGGAGA 
TCAAATAAAT CATTTCAAGA ACCATTTTAT GTTGTATTAC TAACGCCTGT TCCAGATAAT 
ACAGAAGTAT CAATTTGGGC TGGAAATGAC GAAAAACCAT GCGAAGAAGT TCGAAATGAG 
AAAGCAAAAG TGCATCGACA AGTGGCAAAA TTTAACGATT TGCGGTTTGT CGGGCGGTCC 
GGCAGAGGCC GAAAATTCCA TTTGACAATC GTTATACATT CGGCGCCGAT GATGGTGGCC 
ACCGTCAAAA ATGTGATCAA GGTTACGGTT GATGGACCAA GGGATGCGAG AATACCAAAA 
CCACAAGGAT CTTTGAAACG GCAGGCAGAA CAGCAGACAA TATTCCCAAA TGATATTATC 
CGAACGCCTG GACCACCGAT GCCAATGACA ATGATTCCAC CACCATGGTT TCCTTTACCA 
ATGACTCAAA CTTTCCCCCC ATCATTTTTT CCGCTTATCT CTCCAGGACC ACATCCTTCT 
ATCTCAGCTG CACTTTGGAA AATTCACAGC GAATCGATGA AAACTCCGAT TAAACAAAAA 
GTTGAACAGG AAAATGTATC CCTTAATACG TCTACATGCC TATCATCTCC ATCAATTTTT 
ATAACTCCAA CTTCTGATGA TCGGAAGTTA AAACGACCAT CTTCTCCTCG TTCAATCACA 
AAATCATCAG AAACTTCAAT TAATTTAATT CAAGAAACTC CGGAATCTGT AGAATCAAAA 
AGACGAAGAA ATGTATCAAT AACTTCATCG AATAGTTCTT CTCCGACTAT TTGGAGGCCT 
TTTTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

rnt-1 ( NM_059278.6 ) cDNA ORF clone, Caenorhabditis elegans -> NP_491679.1 Caenorhabditis elegans Runt domain-containing protein (rnt-1), mRNA.

Price & Availability↑

CloneID	OCa336358
Clone ID Related Accession (Same CDS sequence)	NM_059278.5 , NM_059278.6
Accession Version	NM_059278.6 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 906bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-10-17
Organism	Caenorhabditis elegans
Product	Runt domain-containing protein
Comment	Comment: REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003279). On Sep 4, 2019 this sequence version replaced NM_059278.5.

ATGACCAACG TCTTCCATCA CGTTCGGAAT TTTATAGAGC AACAACCTGC ACCTGCTAAA 
ACATTAGAGA AATCATCATC TCCAAACATT TTATACACAG CTCTTCCGAA GCATTGGAGA 
TCAAATAAAT CATTTCAAGA ACCATTTTAT GTTGTATTAC TAACGCCTGT TCCAGATAAT 
ACAGAAGTAT CAATTTGGGC TGGAAATGAC GAAAAACCAT GCGAAGAAGT TCGAAATGAG 
AAAGCAAAAG TGCATCGACA AGTGGCAAAA TTTAACGATT TGCGGTTTGT CGGGCGGTCC 
GGCAGAGGCC GAAAATTCCA TTTGACAATC GTTATACATT CGGCGCCGAT GATGGTGGCC 
ACCGTCAAAA ATGTGATCAA GGTTACGGTT GATGGACCAA GGGATGCGAG AATACCAAAA 
CCACAAGGAT CTTTGAAACG GCAGGCAGAA CAGCAGACAA TATTCCCAAA TGATATTATC 
CGAACGCCTG GACCACCGAT GCCAATGACA ATGATTCCAC CACCATGGTT TCCTTTACCA 
ATGACTCAAA CTTTCCCCCC ATCATTTTTT CCGCTTATCT CTCCAGGACC ACATCCTTCT 
ATCTCAGCTG CACTTTGGAA AATTCACAGC GAATCGATGA AAACTCCGAT TAAACAAAAA 
GTTGAACAGG AAAATGTATC CCTTAATACG TCTACATGCC TATCATCTCC ATCAATTTTT 
ATAACTCCAA CTTCTGATGA TCGGAAGTTA AAACGACCAT CTTCTCCTCG TTCAATCACA 
AAATCATCAG AAACTTCAAT TAATTTAATT CAAGAAACTC CGGAATCTGT AGAATCAAAA 
AGACGAAGAA ATGTATCAAT AACTTCATCG AATAGTTCTT CTCCGACTAT TTGGAGGCCT 
TTTTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_491679.1
CDS	31..936
Translation	MTNVFHHVRNFIEQQPAPAKTLEKSSSPNILYTALPKHWRSNKSFQEPFYVVLLTPVPDNTEVSIWAGNDEKPCEEVRNEKAKVHRQVAKFNDLRFVGRSGRGRKFHLTIVIHSAPMMVATVKNVIKVTVDGPRDARIPKPQGSLKRQAEQQTIFPNDIIRTPGPPMPMTMIPPPWFPLPMTQTFPPSFFPLISPGPHPSISAALWKIHSESMKTPIKQKVEQENVSLNTSTCLSSPSIFITPTSDDRKLKRPSSPRSITKSSETSINLIQETPESVESKRRRNVSITSSNSSSPTIWRPF

Target ORF information:

RefSeq Version	NM_059278.6
Organism	Caenorhabditis elegans
Definition	Caenorhabditis elegans Runt domain-containing protein (rnt-1), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_059278.6

ORF Insert Sequence:

ATGACCAACG TCTTCCATCA CGTTCGGAAT TTTATAGAGC AACAACCTGC ACCTGCTAAA 
ACATTAGAGA AATCATCATC TCCAAACATT TTATACACAG CTCTTCCGAA GCATTGGAGA 
TCAAATAAAT CATTTCAAGA ACCATTTTAT GTTGTATTAC TAACGCCTGT TCCAGATAAT 
ACAGAAGTAT CAATTTGGGC TGGAAATGAC GAAAAACCAT GCGAAGAAGT TCGAAATGAG 
AAAGCAAAAG TGCATCGACA AGTGGCAAAA TTTAACGATT TGCGGTTTGT CGGGCGGTCC 
GGCAGAGGCC GAAAATTCCA TTTGACAATC GTTATACATT CGGCGCCGAT GATGGTGGCC 
ACCGTCAAAA ATGTGATCAA GGTTACGGTT GATGGACCAA GGGATGCGAG AATACCAAAA 
CCACAAGGAT CTTTGAAACG GCAGGCAGAA CAGCAGACAA TATTCCCAAA TGATATTATC 
CGAACGCCTG GACCACCGAT GCCAATGACA ATGATTCCAC CACCATGGTT TCCTTTACCA 
ATGACTCAAA CTTTCCCCCC ATCATTTTTT CCGCTTATCT CTCCAGGACC ACATCCTTCT 
ATCTCAGCTG CACTTTGGAA AATTCACAGC GAATCGATGA AAACTCCGAT TAAACAAAAA 
GTTGAACAGG AAAATGTATC CCTTAATACG TCTACATGCC TATCATCTCC ATCAATTTTT 
ATAACTCCAA CTTCTGATGA TCGGAAGTTA AAACGACCAT CTTCTCCTCG TTCAATCACA 
AAATCATCAG AAACTTCAAT TAATTTAATT CAAGAAACTC CGGAATCTGT AGAATCAAAA 
AGACGAAGAA ATGTATCAAT AACTTCATCG AATAGTTCTT CTCCGACTAT TTGGAGGCCT 
TTTTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Genome sequence of the nematode C. elegans: a platform for investigating biology.
Science (New York, N.Y.)282(5396)2012-8(1998 Dec)

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rnt-1 cDNA ORF clone, Caenorhabditis elegans

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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