Gene Symbol | CD1A |
Entrez Gene ID | 781011 |
Full Name | CD1a molecule |
Gene Type | protein-coding |
Organism | Bos taurus(cattle) |
ORF » Species Summary » Bos taurus » CD1A cDNA ORF clone
Gene Symbol | CD1A |
Entrez Gene ID | 781011 |
Full Name | CD1a molecule |
Gene Type | protein-coding |
Organism | Bos taurus(cattle) |
mRNA | Protein | Name |
---|---|---|
XM_005203576.3 | XP_005203633.1 | T-cell surface glycoprotein CD1a isoform X1 |
NM_001105456.2 | NP_001098926.1 | T-cell surface glycoprotein CD1a isoform 2 precursor |
NM_001075382.2 | NP_001068850.2 | T-cell surface glycoprotein CD1a isoform 1 precursor |
XM_024989779.1 | XP_024845547.1 | T-cell surface glycoprotein CD1a isoform X2 |
XM_024989778.1 | XP_024845546.1 | T-cell surface glycoprotein CD1a isoform X1 |
A whole-genome assembly of the domestic cow, Bos taurus.
Zimin AV, Delcher AL, Florea L, Kelley DR, Schatz MC, Puiu D, Hanrahan F, Pertea G, Van Tassell CP, Sonstegard TS, Mar?ais G, Roberts M, Subramanian P, Yorke JA, Salzberg SL
Genome biology10(4)R42(2009)
The bovine CD1 family contains group 1 CD1 proteins, but no functional CD1d.
Van Rhijn I, Koets AP, Im JS, Piebes D, Reddington F, Besra GS, Porcelli SA, van Eden W, Rutten VP
Journal of immunology (Baltimore, Md. : 1950)176(8)4888-93(2006 Apr)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following CD1A gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the CD1A cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OBa17204 | |
Clone ID Related Accession (Same CDS sequence) | XM_005203576.3 , NM_001075382.2 | |
Accession Version | NM_001075382.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1041bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-10-22 | |
Organism | Bos taurus(cattle) | |
Product | T-cell surface glycoprotein CD1a isoform 1 precursor | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AAFC05034889.1. On or before Jun 3, 2017 this sequence version replaced XM_005203576.3, NM_001075382.1. Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1). Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: DQ192541.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN02822089, SAMN02822090 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGCTATTTC TGCAACTTCC ATTGCTCCTG GCTCTCCTCG TGGGTGGAGA CAATGAACAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001068850.2 |
CDS | 92..1132 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001075382.2 |
1 | ATGCTATTTC TGCAACTTCC ATTGCTCCTG GCTCTCCTCG TGGGTGGAGA CAATGAACAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa36147 | |
Clone ID Related Accession (Same CDS sequence) | NM_001105456.2 | |
Accession Version | NM_001105456.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 762bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-13 | |
Organism | Bos taurus(cattle) | |
Product | T-cell surface glycoprotein CD1a isoform 2 precursor | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BC149743.1. On Jan 31, 2016 this sequence version replaced NM_001105456.1. Transcript Variant: This variant (2) lacks an alternate in-frame exon in the 3' coding region compared to variant 1. The encoded isoform (2) is shorter than isoform 1. ##Evidence-Data-START## Transcript exon combination :: BC149743.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN03145447, SAMN03145450 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGCTATTTC TGCAACTTCC ATTGCTCCTG GCTCTCCTCG TGGGTGGAGA CAATGAACAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001098926.1 |
CDS | 92..853 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001105456.2 |
1 | ATGCTATTTC TGCAACTTCC ATTGCTCCTG GCTCTCCTCG TGGGTGGAGA CAATGAACAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa17204 | |
Clone ID Related Accession (Same CDS sequence) | XM_005203576.3 , NM_001075382.2 | |
Accession Version | XM_005203576.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1041bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-01-25 | |
Organism | Bos taurus(Cattle) | |
Product | T-cell surface glycoprotein CD1a isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003103857.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jan 26, 2016 this sequence version replaced XM_005203576.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bos taurus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCTATTTC TGCAACTTCC ATTGCTCCTG GCTCTCCTCG TGGGTGGAGA CAATGAACAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005203633.1 |
CDS | 370..1410 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005203576.3 |
1 | ATGCTATTTC TGCAACTTCC ATTGCTCCTG GCTCTCCTCG TGGGTGGAGA CAATGAACAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa233063 | |
Clone ID Related Accession (Same CDS sequence) | XM_024989778.1 | |
Accession Version | XM_024989778.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1041bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | T-cell surface glycoprotein CD1a isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037330.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCTATTTC TGCAACTTCC ATTGCTCCTG GCTCTCCTCG TGGGTGGAGA CAATGAACAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_024845546.1 |
CDS | 461..1501 |
Translation |
Target ORF information:
Target ORF information:
|
XM_024989778.1 |
1 | ATGCTATTTC TGCAACTTCC ATTGCTCCTG GCTCTCCTCG TGGGTGGAGA CAATGAACAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa233064 | |
Clone ID Related Accession (Same CDS sequence) | XM_024989779.1 | |
Accession Version | XM_024989779.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 774bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | T-cell surface glycoprotein CD1a isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037330.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCTATTTC TGCAACTTCC ATTGCTCCTG GCTCTCCTCG TGGGTGGAGA CAATGAACAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_024845547.1 |
CDS | 474..1247 |
Translation |
Target ORF information:
Target ORF information:
|
XM_024989779.1 |
1 | ATGCTATTTC TGCAACTTCC ATTGCTCCTG GCTCTCCTCG TGGGTGGAGA CAATGAACAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
A whole-genome assembly of the domestic cow, Bos taurus. |
The bovine CD1 family contains group 1 CD1 proteins, but no functional CD1d. |