CIITA gene cDNA ORF clone, Bos taurus(cattle)

mRNA	Protein	Name
XM_585540.8	XP_585540.5	MHC class II transactivator isoform X5
XM_015460292.1	XP_015315778.1	MHC class II transactivator isoform X2
XM_024985427.1	XP_024841195.1	MHC class II transactivator isoform X6
XM_010819255.2	XP_010817557.1	MHC class II transactivator isoform X1
XM_015469297.1	XP_015324783.1	MHC class II transactivator isoform X1
XM_015469298.1	XP_015324784.1	MHC class II transactivator isoform X2
XM_015469299.1	XP_015324785.1	MHC class II transactivator isoform X3
XM_024985426.1	XP_024841194.1	MHC class II transactivator isoform X5
XM_010819257.2	XP_010817559.1	MHC class II transactivator isoform X4
XM_010819256.3	XP_010817558.1	MHC class II transactivator isoform X2
XM_010819258.2	XP_010817560.1	MHC class II transactivator isoform X5
XM_010819257.3	XP_010817559.1	MHC class II transactivator isoform X3
XM_010819256.2	XP_010817558.1	MHC class II transactivator isoform X3
XM_005196914.3	XP_005196971.1	MHC class II transactivator isoform X4
XM_010819255.3	XP_010817557.1	MHC class II transactivator isoform X1
XM_010819258.3	XP_010817560.1	MHC class II transactivator isoform X4

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)
OBa230679	XM_024985427.1 Latest version!	Bos taurus class II major histocompatibility complex transactivator (CIITA), transcript variant X6, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$475.30 $679.00
OBa230678	XM_024985426.1 Latest version!	Bos taurus class II major histocompatibility complex transactivator (CIITA), transcript variant X5, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	19-21	$559.30 $799.00
OBa88464	XM_015469298.1 Latest version!	Bos taurus class II, major histocompatibility complex, transactivator (CIITA), transcript variant X2, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	19-21	$713.30 $1019.00
OBa88464	XM_015460292.1 Latest version!	Bos taurus class II, major histocompatibility complex, transactivator (CIITA), transcript variant X2, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	19-21	$713.30 $1019.00
OBa11814	XM_005196914.3 Latest version!	Bos taurus class II, major histocompatibility complex, transactivator (CIITA), transcript variant X4, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	20	$629.30 $899.00
OBa11814	XM_010819257.3 Latest version!	Bos taurus class II major histocompatibility complex transactivator (CIITA), transcript variant X3, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	20	$629.30 $899.00
OBa11815	XM_010819258.3 Latest version!	Bos taurus class II major histocompatibility complex transactivator (CIITA), transcript variant X4, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	20	$629.30 $899.00
OBa11815	XM_585540.8 Latest version!	Bos taurus class II, major histocompatibility complex, transactivator (CIITA), transcript variant X5, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	20	$629.30 $899.00
OBa47246	XM_015469297.1 Latest version!	Bos taurus class II, major histocompatibility complex, transactivator (CIITA), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	20	$713.30 $1019.00
OBa47246	XM_010819255.3 Latest version!	Bos taurus class II major histocompatibility complex transactivator (CIITA), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	20	$713.30 $1019.00
OBa47247	XM_015469299.1 Latest version!	Bos taurus class II, major histocompatibility complex, transactivator (CIITA), transcript variant X3, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	20	$629.30 $899.00
OBa47247	XM_010819256.3 Latest version!	Bos taurus class II major histocompatibility complex transactivator (CIITA), transcript variant X2, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	20	$629.30 $899.00
View Old Accession Versions >>
OBa11814	XM_010819257.2	Bos taurus class II, major histocompatibility complex, transactivator (CIITA), transcript variant X4, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	20	$629.30 $899.00
OBa47247	XM_010819256.2	Bos taurus class II, major histocompatibility complex, transactivator (CIITA), transcript variant X3, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	20	$629.30 $899.00
OBa47246	XM_010819255.2	Bos taurus class II, major histocompatibility complex, transactivator (CIITA), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	20	$713.30 $1019.00
OBa11815	XM_010819258.2	Bos taurus class II, major histocompatibility complex, transactivator (CIITA), transcript variant X5, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	20	$629.30 $899.00
Hide Old Accession Versions >>

CIITA ( XM_024985427.1 ) cDNA ORF clone, Bos taurus(cattle) -> XP_024841195.1 Bos taurus class II major histocompatibility complex transactivator (CIITA), transcript variant X6, mRNA.

Price & Availability↑

CloneID	OBa230679
Clone ID Related Accession (Same CDS sequence)	XM_024985427.1
Accession Version	XM_024985427.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2940bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2018-05-06
Organism	Bos taurus(cattle)
Product	MHC class II transactivator isoform X6
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037352.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGAATCACT TCCAGACCAT CCTGTCTCAG GTCCGGATGT TGCTCTCTAG CCATCGGCCG 
AGCCAAGTGC AGGCGCTTCT GGACAACCTG CTGGCGGAAG AGCTCCTCTC CAGGGAGTAC 
CACCATGCCC TGCTCCATGA GTCTGATGGT GAGGCTCTGG CCAGGAAGAT CTCCTTGACC 
CTGCTGGAGA AAGGAGACCC AGACTTCGCC CTCTTGGGGT GGATCTGGAG TGGGCTGCAG 
GCCCCCACAG CAGAGAGGGG CCCCAGCTAC AAGGACCCTG GTGGCAGTGG ACAGTGCCCA 
ACCATGGAGC TGGGGCCTCT AGAAGGCAGT TACTTAGAAC TTCTCAACAG CAGTGCTGAC 
CCTTTGCAGC TCTACCACCT CTACGACCGG ATGGATCTGA CAGGAGAAGA AGAAATAGAG 
CTCTGCTCAG AGCCTGACAC AGACACCATC AACTGCGAAC AGTTCAGCAG GCTGTTGTGT 
GACATGGAAG GTGATGAAGA GACCAGGGAA GCTTATGCCA ATATCGCGGA ATTGGACCAG 
TACGTCTTCC AGGACACCCA GCTGGAGGGC CTGAGCAAAG ACATTTTCAT CGAGCACATA 
GGATTGGAAG AAATGATCAG CGAGAGCGTG GAATTGCTGG AGGAGGCAGG GCAGAAAAGT 
CAGAAGAGAC CCTTCCCAGA GGAGCTGCCT GTGGATCTGA AGCACCGGAA GCTAGCCGAG 
CCCCTCACCA TGCCCGTGGT GACTGGCACT TTCCTGGTGG GGCCAGTGAG CGACTCCTTG 
GTTCAGCCTT GCCCGCCACC TCCTGCTCTG TTCAACACGG AGCCAGCATC CAGCCAGACC 
CGGCTGAAGG ACGCAGCGCC TCCGTCCAGT TCCTTGTTGA GCTGCCTGAG TCTTCCCGCG 
GGACCCATTC AGATTATCCC CACTCTCCCC ACTCTGCCCC AGGGGCTGTG GCCGATCTCA 
GGGACTGGGA CGGGGGTCTC CAGTATACTC ATCTACCAAA GTGAGATGCC CCCGGCCAGC 
CAAACACCCC CATCCAGCGG GCCTGCTGTC CAGAGCCTTC CCAAGTCCCC AGACCGGCCT 
GGCTCTGCCA GCCCCTTTGC CCCGTCTGCC GCTGACCTCC CCAGCATGCC CGAACCGGCC 
CTCACCTCCC GTGCAGGCCT GACAGAGGAT GAGATGTCCC CCACCAAATG CCCAGCAGCT 
GGCGGGGCCT CCAGCAAACT TCCCAAGTGG CCTGAGAGCG TGGAGCAGTT CTACCAGTCG 
CTACGGGACA AGTACCAGGC CCAGCCCACC GGCCCGGAAG GCACCCTGGT GGACATGGAC 
CTGGTGAGGG TGAGGCTGGA GAAGAGCAGC GGGAAGAGCC AGGAGAGAGA GCTGGCCACC 
CTGGACTGGG CAGAGCGGCA GCCGGCCCGA GGGGGTCTGG CCGAGGTGCT GCTGGCCGCC 
AGCGACCGCC AGCAGCCCCG GGAGACGCGG GTGATCGCTG TGCTGGGCAA AGCGGGACAT 
GGGAAGAGTC ACTGGGCCCG GGCCGTGAGC CGGGCCTGGG CCCACGGCCA GCTGCCACAG 
TACGACTTTG TCTTCTGTGT CCCCTGCCAT CGTTTGGACC GTCCGGGGAC CTCCTACCGC 
CTGCAGGATC TGCTGTCCTC CCTGGGCCCG CAGCCGTTGC CAGTGGACGA CGAGGTCCTC 
AGTTACATTG CGAGGAGACC CAACCGCATC CTGCTCATCC TGGATGGCTT CGAGGACCTG 
GAAGCCCACG ATGGCTCCCT GCACAGCACA GGAGGCCCCG GGTCGGCAGA GCCCCGCTCC 
CTCCGGGGGC TGCTGGCGGG CCTCCTCCAG CGCAAGCTGC TGCGGGGCTG CACCCTGCTG 
CTCACGGCCT GGCCCCGGGG CCGCCTGGCC CAGAGCCTGA GCAAGGTGGA CGCCCTGTTT 
GAGGTGGCCG GCTTCTCGGC CCAGCAGGTT GAGACCTATG TGAGGCGTTA CTTTGAGTCG 
GAGGGGACCG CTGAGCACCA AGAGAGAGCC CTGGCGCTCC TGCAGGCCCG GCCGTTCCTC 
CTGAGCCACA GCCACAGCCC CACCGTGTGC CGGACCGTGT GCCAGCTCGC AGAGGCCCTC 
CTGCAGCGGA GTGATGAAGC CCAGCTGCCC TCCACGCTCA CGGGCCTCTA CGTGGGCCTG 
CTAGGCCCAG CAGCTCGAGA TAGCCCCCCA GGGGCCCTGG CGGAACTGGC CAGGCTGGCC 
TGGGAGCTGG GCCGTGTGCA CCAGAGGGGC CTGAAGGCGG GCTGTTTACC GTCGGCGGAG 
GCGAGGGCCT GGGCTGTGGC CCAAGGCTGG TTGCGGCCCA CCCCGGGGGC CCCAGAGACG 
GAGCTGGCCT TCTCCAGCTT CCTCCTGCAG TGCTTCCTGG GGGCTGTGTG GCTGGCTCTG 
AGCGGCGAAA TCAAGGACAA GGAGCTGCCG CAGTATCTGG CCTTGACCCC GAGGAAGAAG 
CGGCCCTATG ACAACTGGCT GGAGGGCGTG CCGCGCTTCT TGGTCGGACT GGTCTTCCAG 
CCTCGCGCCG GCTGCCTGGG GGCCCTGGCA GGGCCGGCGG CCACCACGTC AGCGGACAGG 
AAGCAGAAGG TGCTCACGAG GTACCTGAAG CGTCTGCAGC CCGGGACGCT GCAGGCGGGG 
CGGCTGCTGG AGCTGCTGCA CTGTGCCCAC GAGGCGCTGG ACCCCGGGCT CTGGCAGCAC 
GTGCTGCAGG GGCTCCCTGC CCGCCTCTCC TTCCTGGGCA CACGGCTCAC GCCTCCTGAC 
ACCCATGTGC TGGGCAGCGC CCTGGAGGCC GCGGGCCGAG ACTTTTCCCT GGACCTCCGC 
AGCACTGGCG TCGACGCCTC TGGACTGGGG AGCCTCGTGG GACTCAGCTG TGTCACCCGT 
TTCAGCCTGG TCACCGTGCC CGGGTCTGAG GCCCTTCCTT CACAGGGCTG CATTGAGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_024841195.1
CDS	277..3216
Translation	MNHFQTILSQVRMLLSSHRPSQVQALLDNLLAEELLSREYHHALLHESDGEALARKISLTLLEKGDPDFALLGWIWSGLQAPTAERGPSYKDPGGSGQCPTMELGPLEGSYLELLNSSADPLQLYHLYDRMDLTGEEEIELCSEPDTDTINCEQFSRLLCDMEGDEETREAYANIAELDQYVFQDTQLEGLSKDIFIEHIGLEEMISESVELLEEAGQKSQKRPFPEELPVDLKHRKLAEPLTMPVVTGTFLVGPVSDSLVQPCPPPPALFNTEPASSQTRLKDAAPPSSSLLSCLSLPAGPIQIIPTLPTLPQGLWPISGTGTGVSSILIYQSEMPPASQTPPSSGPAVQSLPKSPDRPGSASPFAPSAADLPSMPEPALTSRAGLTEDEMSPTKCPAAGGASSKLPKWPESVEQFYQSLRDKYQAQPTGPEGTLVDMDLVRVRLEKSSGKSQERELATLDWAERQPARGGLAEVLLAASDRQQPRETRVIAVLGKAGHGKSHWARAVSRAWAHGQLPQYDFVFCVPCHRLDRPGTSYRLQDLLSSLGPQPLPVDDEVLSYIARRPNRILLILDGFEDLEAHDGSLHSTGGPGSAEPRSLRGLLAGLLQRKLLRGCTLLLTAWPRGRLAQSLSKVDALFEVAGFSAQQVETYVRRYFESEGTAEHQERALALLQARPFLLSHSHSPTVCRTVCQLAEALLQRSDEAQLPSTLTGLYVGLLGPAARDSPPGALAELARLAWELGRVHQRGLKAGCLPSAEARAWAVAQGWLRPTPGAPETELAFSSFLLQCFLGAVWLALSGEIKDKELPQYLALTPRKKRPYDNWLEGVPRFLVGLVFQPRAGCLGALAGPAATTSADRKQKVLTRYLKRLQPGTLQAGRLLELLHCAHEALDPGLWQHVLQGLPARLSFLGTRLTPPDTHVLGSALEAAGRDFSLDLRSTGVDASGLGSLVGLSCVTRFSLVTVPGSEALPSQGCIE

Target ORF information:

RefSeq Version	XM_024985427.1
Organism	Bos taurus(cattle)
Definition	Bos taurus class II major histocompatibility complex transactivator (CIITA), transcript variant X6, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_024985427.1

ORF Insert Sequence:

ATGAATCACT TCCAGACCAT CCTGTCTCAG GTCCGGATGT TGCTCTCTAG CCATCGGCCG 
AGCCAAGTGC AGGCGCTTCT GGACAACCTG CTGGCGGAAG AGCTCCTCTC CAGGGAGTAC 
CACCATGCCC TGCTCCATGA GTCTGATGGT GAGGCTCTGG CCAGGAAGAT CTCCTTGACC 
CTGCTGGAGA AAGGAGACCC AGACTTCGCC CTCTTGGGGT GGATCTGGAG TGGGCTGCAG 
GCCCCCACAG CAGAGAGGGG CCCCAGCTAC AAGGACCCTG GTGGCAGTGG ACAGTGCCCA 
ACCATGGAGC TGGGGCCTCT AGAAGGCAGT TACTTAGAAC TTCTCAACAG CAGTGCTGAC 
CCTTTGCAGC TCTACCACCT CTACGACCGG ATGGATCTGA CAGGAGAAGA AGAAATAGAG 
CTCTGCTCAG AGCCTGACAC AGACACCATC AACTGCGAAC AGTTCAGCAG GCTGTTGTGT 
GACATGGAAG GTGATGAAGA GACCAGGGAA GCTTATGCCA ATATCGCGGA ATTGGACCAG 
TACGTCTTCC AGGACACCCA GCTGGAGGGC CTGAGCAAAG ACATTTTCAT CGAGCACATA 
GGATTGGAAG AAATGATCAG CGAGAGCGTG GAATTGCTGG AGGAGGCAGG GCAGAAAAGT 
CAGAAGAGAC CCTTCCCAGA GGAGCTGCCT GTGGATCTGA AGCACCGGAA GCTAGCCGAG 
CCCCTCACCA TGCCCGTGGT GACTGGCACT TTCCTGGTGG GGCCAGTGAG CGACTCCTTG 
GTTCAGCCTT GCCCGCCACC TCCTGCTCTG TTCAACACGG AGCCAGCATC CAGCCAGACC 
CGGCTGAAGG ACGCAGCGCC TCCGTCCAGT TCCTTGTTGA GCTGCCTGAG TCTTCCCGCG 
GGACCCATTC AGATTATCCC CACTCTCCCC ACTCTGCCCC AGGGGCTGTG GCCGATCTCA 
GGGACTGGGA CGGGGGTCTC CAGTATACTC ATCTACCAAA GTGAGATGCC CCCGGCCAGC 
CAAACACCCC CATCCAGCGG GCCTGCTGTC CAGAGCCTTC CCAAGTCCCC AGACCGGCCT 
GGCTCTGCCA GCCCCTTTGC CCCGTCTGCC GCTGACCTCC CCAGCATGCC CGAACCGGCC 
CTCACCTCCC GTGCAGGCCT GACAGAGGAT GAGATGTCCC CCACCAAATG CCCAGCAGCT 
GGCGGGGCCT CCAGCAAACT TCCCAAGTGG CCTGAGAGCG TGGAGCAGTT CTACCAGTCG 
CTACGGGACA AGTACCAGGC CCAGCCCACC GGCCCGGAAG GCACCCTGGT GGACATGGAC 
CTGGTGAGGG TGAGGCTGGA GAAGAGCAGC GGGAAGAGCC AGGAGAGAGA GCTGGCCACC 
CTGGACTGGG CAGAGCGGCA GCCGGCCCGA GGGGGTCTGG CCGAGGTGCT GCTGGCCGCC 
AGCGACCGCC AGCAGCCCCG GGAGACGCGG GTGATCGCTG TGCTGGGCAA AGCGGGACAT 
GGGAAGAGTC ACTGGGCCCG GGCCGTGAGC CGGGCCTGGG CCCACGGCCA GCTGCCACAG 
TACGACTTTG TCTTCTGTGT CCCCTGCCAT CGTTTGGACC GTCCGGGGAC CTCCTACCGC 
CTGCAGGATC TGCTGTCCTC CCTGGGCCCG CAGCCGTTGC CAGTGGACGA CGAGGTCCTC 
AGTTACATTG CGAGGAGACC CAACCGCATC CTGCTCATCC TGGATGGCTT CGAGGACCTG 
GAAGCCCACG ATGGCTCCCT GCACAGCACA GGAGGCCCCG GGTCGGCAGA GCCCCGCTCC 
CTCCGGGGGC TGCTGGCGGG CCTCCTCCAG CGCAAGCTGC TGCGGGGCTG CACCCTGCTG 
CTCACGGCCT GGCCCCGGGG CCGCCTGGCC CAGAGCCTGA GCAAGGTGGA CGCCCTGTTT 
GAGGTGGCCG GCTTCTCGGC CCAGCAGGTT GAGACCTATG TGAGGCGTTA CTTTGAGTCG 
GAGGGGACCG CTGAGCACCA AGAGAGAGCC CTGGCGCTCC TGCAGGCCCG GCCGTTCCTC 
CTGAGCCACA GCCACAGCCC CACCGTGTGC CGGACCGTGT GCCAGCTCGC AGAGGCCCTC 
CTGCAGCGGA GTGATGAAGC CCAGCTGCCC TCCACGCTCA CGGGCCTCTA CGTGGGCCTG 
CTAGGCCCAG CAGCTCGAGA TAGCCCCCCA GGGGCCCTGG CGGAACTGGC CAGGCTGGCC 
TGGGAGCTGG GCCGTGTGCA CCAGAGGGGC CTGAAGGCGG GCTGTTTACC GTCGGCGGAG 
GCGAGGGCCT GGGCTGTGGC CCAAGGCTGG TTGCGGCCCA CCCCGGGGGC CCCAGAGACG 
GAGCTGGCCT TCTCCAGCTT CCTCCTGCAG TGCTTCCTGG GGGCTGTGTG GCTGGCTCTG 
AGCGGCGAAA TCAAGGACAA GGAGCTGCCG CAGTATCTGG CCTTGACCCC GAGGAAGAAG 
CGGCCCTATG ACAACTGGCT GGAGGGCGTG CCGCGCTTCT TGGTCGGACT GGTCTTCCAG 
CCTCGCGCCG GCTGCCTGGG GGCCCTGGCA GGGCCGGCGG CCACCACGTC AGCGGACAGG 
AAGCAGAAGG TGCTCACGAG GTACCTGAAG CGTCTGCAGC CCGGGACGCT GCAGGCGGGG 
CGGCTGCTGG AGCTGCTGCA CTGTGCCCAC GAGGCGCTGG ACCCCGGGCT CTGGCAGCAC 
GTGCTGCAGG GGCTCCCTGC CCGCCTCTCC TTCCTGGGCA CACGGCTCAC GCCTCCTGAC 
ACCCATGTGC TGGGCAGCGC CCTGGAGGCC GCGGGCCGAG ACTTTTCCCT GGACCTCCGC 
AGCACTGGCG TCGACGCCTC TGGACTGGGG AGCCTCGTGG GACTCAGCTG TGTCACCCGT 
TTCAGCCTGG TCACCGTGCC CGGGTCTGAG GCCCTTCCTT CACAGGGCTG CATTGAGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

CIITA ( XM_024985426.1 ) cDNA ORF clone, Bos taurus(cattle) -> XP_024841194.1 Bos taurus class II major histocompatibility complex transactivator (CIITA), transcript variant X5, mRNA.

Price & Availability↑

CloneID	OBa230678
Clone ID Related Accession (Same CDS sequence)	XM_024985426.1
Accession Version	XM_024985426.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3318bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2018-05-06
Organism	Bos taurus(cattle)
Product	MHC class II transactivator isoform X5
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037352.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGAGCTGG GGCCTCTAGA AGGCAGTTAC TTAGAACTTC TCAACAGCAG TGCTGACCCT 
TTGCAGCTCT ACCACCTCTA CGACCGGATG GATCTGACAG GAGAAGAAGA AATAGAGCTC 
TGCTCAGAGC CTGACACAGA CACCATCAAC TGCGAACAGT TCAGCAGGCT GTTGTGTGAC 
ATGGAAGGTG ATGAAGAGAC CAGGGAAGCT TATGCCAATA TCGCGGAATT GGACCAGTAC 
GTCTTCCAGG ACACCCAGCT GGAGGGCCTG AGCAAAGACA TTTTCATCGA GCACATAGGA 
TTGGAAGAAA TGATCAGCGA GAGCGTGGAA TTGCTGGAGG AGGCAGGGCA GAAAAGTCAG 
AAGAGACCCT TCCCAGAGGA GCTGCCTGTG GATCTGAAGC ACCGGAAGCT AGCCGAGCCC 
CTCACCATGC CCGTGGTGAC TGGCACTTTC CTGGTGGGGC CAGTGAGCGA CTCCTTGGTT 
CAGCCTTGCC CGCCACCTCC TGCTCTGTTC AACACGGAGC CAGCATCCAG CCAGACCCGG 
CTGAAGGACG CAGCGCCTCC GTCCAGTTCC TTGTTGAGCT GCCTGAGTCT TCCCGCGGGA 
CCCATTCAGA TTATCCCCAC TCTCCCCACT CTGCCCCAGG GGCTGTGGCC GATCTCAGGG 
ACTGGGACGG GGGTCTCCAG TATACTCATC TACCAAAGTG AGATGCCCCC GGCCAGCCAA 
ACACCCCCAT CCAGCGGGCC TGCTGTCCAG AGCCTTCCCA AGTCCCCAGA CCGGCCTGGC 
TCTGCCAGCC CCTTTGCCCC GTCTGCCGCT GACCTCCCCA GCATGCCCGA ACCGGCCCTC 
ACCTCCCGTG CAGGCCTGAC AGAGGATGAG ATGTCCCCCA CCAAATGCCC AGCAGCTGGC 
GGGGCCTCCA GCAAACTTCC CAAGTGGCCT GAGAGCGTGG AGCAGTTCTA CCAGTCGCTA 
CGGGACAAGT ACCAGGCCCA GCCCACCGGC CCGGAAGGCA CCCTGGTGGA CATGGACCTG 
GTGAGGGTGA GGCTGGAGAA GAGCAGCGGG AAGAGCCAGG AGAGAGAGCT GGCCACCCTG 
GACTGGGCAG AGCGGCAGCC GGCCCGAGGG GGTCTGGCCG AGGTGCTGCT GGCCGCCAGC 
GACCGCCAGC AGCCCCGGGA GACGCGGGTG ATCGCTGTGC TGGGCAAAGC GGGACATGGG 
AAGAGTCACT GGGCCCGGGC CGTGAGCCGG GCCTGGGCCC ACGGCCAGCT GCCACAGTAC 
GACTTTGTCT TCTGTGTCCC CTGCCATCGT TTGGACCGTC CGGGGACCTC CTACCGCCTG 
CAGGATCTGC TGTCCTCCCT GGGCCCGCAG CCGTTGCCAG TGGACGACGA GGTCCTCAGT 
TACATTGCGA GGAGACCCAA CCGCATCCTG CTCATCCTGG ATGGCTTCGA GGACCTGGAA 
GCCCACGATG GCTCCCTGCA CAGCACAGGA GGCCCCGGGT CGGCAGAGCC CCGCTCCCTC 
CGGGGGCTGC TGGCGGGCCT CCTCCAGCGC AAGCTGCTGC GGGGCTGCAC CCTGCTGCTC 
ACGGCCTGGC CCCGGGGCCG CCTGGCCCAG AGCCTGAGCA AGGTGGACGC CCTGTTTGAG 
GTGGCCGGCT TCTCGGCCCA GCAGGTTGAG ACCTATGTGA GGCGTTACTT TGAGTCGGAG 
GGGACCGCTG AGCACCAAGA GAGAGCCCTG GCGCTCCTGC AGGCCCGGCC GTTCCTCCTG 
AGCCACAGCC ACAGCCCCAC CGTGTGCCGG ACCGTGTGCC AGCTCGCAGA GGCCCTCCTG 
CAGCGGAGTG ATGAAGCCCA GCTGCCCTCC ACGCTCACGG GCCTCTACGT GGGCCTGCTA 
GGCCCAGCAG CTCGAGATAG CCCCCCAGGG GCCCTGGCGG AACTGGCCAG GCTGGCCTGG 
GAGCTGGGCC GTGTGCACCA GAGGGGCCTG AAGGCGGGCT GTTTACCGTC GGCGGAGGCG 
AGGGCCTGGG CTGTGGCCCA AGGCTGGTTG CGGCCCACCC CGGGGGCCCC AGAGACGGAG 
CTGGCCTTCT CCAGCTTCCT CCTGCAGTGC TTCCTGGGGG CTGTGTGGCT GGCTCTGAGC 
GGCGAAATCA AGGACAAGGA GCTGCCGCAG TATCTGGCCT TGACCCCGAG GAAGAAGCGG 
CCCTATGACA ACTGGCTGGA GGGCGTGCCG CGCTTCTTGG TCGGACTGGT CTTCCAGCCT 
CGCGCCGGCT GCCTGGGGGC CCTGGCAGGG CCGGCGGCCA CCACGTCAGC GGACAGGAAG 
CAGAAGGTGC TCACGAGGTA CCTGAAGCGT CTGCAGCCCG GGACGCTGCA GGCGGGGCGG 
CTGCTGGAGC TGCTGCACTG TGCCCACGAG GCGCTGGACC CCGGGCTCTG GCAGCACGTG 
CTGCAGGGGC TCCCTGCCCG CCTCTCCTTC CTGGGCACAC GGCTCACGCC TCCTGACACC 
CATGTGCTGG GCAGCGCCCT GGAGGCCGCG GGCCGAGACT TTTCCCTGGA CCTCCGCAGC 
ACTGGCGTCG ACGCCTCTGG ACTGGGGAGC CTCGTGGGAC TCAGCTGTGT CACCCGTTTC 
AGGGCTGCAT TGAGTGACAC TGTGGAGCTA TGGGAGTCCC TGCAGCAGCG TGGGGAGGCC 
AAGCTACTCC GGGCAGTGGA GGAGAAGTTC ACCATCGAGC CTTTCAAGGC CAAGTCCATG 
AAGGATGTGG AAGACCTTGG CAATCTCGTG CAGATCCAGA GGACAAGAAG CTCCTCTGAA 
GCAGCAGCTG GGGAGCTCCC TGCTGTCCGA GACTTAAAGA AGCTGGAGTT TGCGCTGGGC 
CCTGTCTTGG GCCCACAGGT TTTTCCTAAA CTGGTGAAGA TCCTTGAGGC CTTTACTTCC 
CTTCAGCATC TAGACCTGGA CTCGCTGAGC GAGAACAAGA TTGGGGACGA GGGTGTCGCC 
CAGCTCTCAG CCACCTTCCC TCAGCTGAAG GCCCTGGAGA CACTCAACTT GTCCCAGAAC 
AACATCACCG ACGTGGGTGC CTGCAAGCTG GCCGAGGCTC TGCCCGCGCT GGCCACGTCC 
CTCCTCAGGT TGAGCTTGTA CAATAACTGT ATCTGCGACG CGGGAGCCGA GAGCCTGGCG 
CACGCGCTTC CAGACATGGT GTCCCTCCGG GTGCTGGACG TCCAGTACAA CAAGTTCACA 
GCCGCTGGGG CTCAGCAGCT TGCCGCTGGC CTGAGAAAGT GCCCTCAGGT GAAGACACTG 
GCGATGTGGA CGCCCACCAT CCCCTTTGGC GTCCAGGAAC ACCTGCAGCA GCTGGACCCA 
CGAATCATTC TGAGATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_024841194.1
CDS	149..3466
Translation	MELGPLEGSYLELLNSSADPLQLYHLYDRMDLTGEEEIELCSEPDTDTINCEQFSRLLCDMEGDEETREAYANIAELDQYVFQDTQLEGLSKDIFIEHIGLEEMISESVELLEEAGQKSQKRPFPEELPVDLKHRKLAEPLTMPVVTGTFLVGPVSDSLVQPCPPPPALFNTEPASSQTRLKDAAPPSSSLLSCLSLPAGPIQIIPTLPTLPQGLWPISGTGTGVSSILIYQSEMPPASQTPPSSGPAVQSLPKSPDRPGSASPFAPSAADLPSMPEPALTSRAGLTEDEMSPTKCPAAGGASSKLPKWPESVEQFYQSLRDKYQAQPTGPEGTLVDMDLVRVRLEKSSGKSQERELATLDWAERQPARGGLAEVLLAASDRQQPRETRVIAVLGKAGHGKSHWARAVSRAWAHGQLPQYDFVFCVPCHRLDRPGTSYRLQDLLSSLGPQPLPVDDEVLSYIARRPNRILLILDGFEDLEAHDGSLHSTGGPGSAEPRSLRGLLAGLLQRKLLRGCTLLLTAWPRGRLAQSLSKVDALFEVAGFSAQQVETYVRRYFESEGTAEHQERALALLQARPFLLSHSHSPTVCRTVCQLAEALLQRSDEAQLPSTLTGLYVGLLGPAARDSPPGALAELARLAWELGRVHQRGLKAGCLPSAEARAWAVAQGWLRPTPGAPETELAFSSFLLQCFLGAVWLALSGEIKDKELPQYLALTPRKKRPYDNWLEGVPRFLVGLVFQPRAGCLGALAGPAATTSADRKQKVLTRYLKRLQPGTLQAGRLLELLHCAHEALDPGLWQHVLQGLPARLSFLGTRLTPPDTHVLGSALEAAGRDFSLDLRSTGVDASGLGSLVGLSCVTRFRAALSDTVELWESLQQRGEAKLLRAVEEKFTIEPFKAKSMKDVEDLGNLVQIQRTRSSSEAAAGELPAVRDLKKLEFALGPVLGPQVFPKLVKILEAFTSLQHLDLDSLSENKIGDEGVAQLSATFPQLKALETLNLSQNNITDVGACKLAEALPALATSLLRLSLYNNCICDAGAESLAHALPDMVSLRVLDVQYNKFTAAGAQQLAAGLRKCPQVKTLAMWTPTIPFGVQEHLQQLDPRIILR

Target ORF information:

RefSeq Version	XM_024985426.1
Organism	Bos taurus(cattle)
Definition	Bos taurus class II major histocompatibility complex transactivator (CIITA), transcript variant X5, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_024985426.1

ORF Insert Sequence:

ATGGAGCTGG GGCCTCTAGA AGGCAGTTAC TTAGAACTTC TCAACAGCAG TGCTGACCCT 
TTGCAGCTCT ACCACCTCTA CGACCGGATG GATCTGACAG GAGAAGAAGA AATAGAGCTC 
TGCTCAGAGC CTGACACAGA CACCATCAAC TGCGAACAGT TCAGCAGGCT GTTGTGTGAC 
ATGGAAGGTG ATGAAGAGAC CAGGGAAGCT TATGCCAATA TCGCGGAATT GGACCAGTAC 
GTCTTCCAGG ACACCCAGCT GGAGGGCCTG AGCAAAGACA TTTTCATCGA GCACATAGGA 
TTGGAAGAAA TGATCAGCGA GAGCGTGGAA TTGCTGGAGG AGGCAGGGCA GAAAAGTCAG 
AAGAGACCCT TCCCAGAGGA GCTGCCTGTG GATCTGAAGC ACCGGAAGCT AGCCGAGCCC 
CTCACCATGC CCGTGGTGAC TGGCACTTTC CTGGTGGGGC CAGTGAGCGA CTCCTTGGTT 
CAGCCTTGCC CGCCACCTCC TGCTCTGTTC AACACGGAGC CAGCATCCAG CCAGACCCGG 
CTGAAGGACG CAGCGCCTCC GTCCAGTTCC TTGTTGAGCT GCCTGAGTCT TCCCGCGGGA 
CCCATTCAGA TTATCCCCAC TCTCCCCACT CTGCCCCAGG GGCTGTGGCC GATCTCAGGG 
ACTGGGACGG GGGTCTCCAG TATACTCATC TACCAAAGTG AGATGCCCCC GGCCAGCCAA 
ACACCCCCAT CCAGCGGGCC TGCTGTCCAG AGCCTTCCCA AGTCCCCAGA CCGGCCTGGC 
TCTGCCAGCC CCTTTGCCCC GTCTGCCGCT GACCTCCCCA GCATGCCCGA ACCGGCCCTC 
ACCTCCCGTG CAGGCCTGAC AGAGGATGAG ATGTCCCCCA CCAAATGCCC AGCAGCTGGC 
GGGGCCTCCA GCAAACTTCC CAAGTGGCCT GAGAGCGTGG AGCAGTTCTA CCAGTCGCTA 
CGGGACAAGT ACCAGGCCCA GCCCACCGGC CCGGAAGGCA CCCTGGTGGA CATGGACCTG 
GTGAGGGTGA GGCTGGAGAA GAGCAGCGGG AAGAGCCAGG AGAGAGAGCT GGCCACCCTG 
GACTGGGCAG AGCGGCAGCC GGCCCGAGGG GGTCTGGCCG AGGTGCTGCT GGCCGCCAGC 
GACCGCCAGC AGCCCCGGGA GACGCGGGTG ATCGCTGTGC TGGGCAAAGC GGGACATGGG 
AAGAGTCACT GGGCCCGGGC CGTGAGCCGG GCCTGGGCCC ACGGCCAGCT GCCACAGTAC 
GACTTTGTCT TCTGTGTCCC CTGCCATCGT TTGGACCGTC CGGGGACCTC CTACCGCCTG 
CAGGATCTGC TGTCCTCCCT GGGCCCGCAG CCGTTGCCAG TGGACGACGA GGTCCTCAGT 
TACATTGCGA GGAGACCCAA CCGCATCCTG CTCATCCTGG ATGGCTTCGA GGACCTGGAA 
GCCCACGATG GCTCCCTGCA CAGCACAGGA GGCCCCGGGT CGGCAGAGCC CCGCTCCCTC 
CGGGGGCTGC TGGCGGGCCT CCTCCAGCGC AAGCTGCTGC GGGGCTGCAC CCTGCTGCTC 
ACGGCCTGGC CCCGGGGCCG CCTGGCCCAG AGCCTGAGCA AGGTGGACGC CCTGTTTGAG 
GTGGCCGGCT TCTCGGCCCA GCAGGTTGAG ACCTATGTGA GGCGTTACTT TGAGTCGGAG 
GGGACCGCTG AGCACCAAGA GAGAGCCCTG GCGCTCCTGC AGGCCCGGCC GTTCCTCCTG 
AGCCACAGCC ACAGCCCCAC CGTGTGCCGG ACCGTGTGCC AGCTCGCAGA GGCCCTCCTG 
CAGCGGAGTG ATGAAGCCCA GCTGCCCTCC ACGCTCACGG GCCTCTACGT GGGCCTGCTA 
GGCCCAGCAG CTCGAGATAG CCCCCCAGGG GCCCTGGCGG AACTGGCCAG GCTGGCCTGG 
GAGCTGGGCC GTGTGCACCA GAGGGGCCTG AAGGCGGGCT GTTTACCGTC GGCGGAGGCG 
AGGGCCTGGG CTGTGGCCCA AGGCTGGTTG CGGCCCACCC CGGGGGCCCC AGAGACGGAG 
CTGGCCTTCT CCAGCTTCCT CCTGCAGTGC TTCCTGGGGG CTGTGTGGCT GGCTCTGAGC 
GGCGAAATCA AGGACAAGGA GCTGCCGCAG TATCTGGCCT TGACCCCGAG GAAGAAGCGG 
CCCTATGACA ACTGGCTGGA GGGCGTGCCG CGCTTCTTGG TCGGACTGGT CTTCCAGCCT 
CGCGCCGGCT GCCTGGGGGC CCTGGCAGGG CCGGCGGCCA CCACGTCAGC GGACAGGAAG 
CAGAAGGTGC TCACGAGGTA CCTGAAGCGT CTGCAGCCCG GGACGCTGCA GGCGGGGCGG 
CTGCTGGAGC TGCTGCACTG TGCCCACGAG GCGCTGGACC CCGGGCTCTG GCAGCACGTG 
CTGCAGGGGC TCCCTGCCCG CCTCTCCTTC CTGGGCACAC GGCTCACGCC TCCTGACACC 
CATGTGCTGG GCAGCGCCCT GGAGGCCGCG GGCCGAGACT TTTCCCTGGA CCTCCGCAGC 
ACTGGCGTCG ACGCCTCTGG ACTGGGGAGC CTCGTGGGAC TCAGCTGTGT CACCCGTTTC 
AGGGCTGCAT TGAGTGACAC TGTGGAGCTA TGGGAGTCCC TGCAGCAGCG TGGGGAGGCC 
AAGCTACTCC GGGCAGTGGA GGAGAAGTTC ACCATCGAGC CTTTCAAGGC CAAGTCCATG 
AAGGATGTGG AAGACCTTGG CAATCTCGTG CAGATCCAGA GGACAAGAAG CTCCTCTGAA 
GCAGCAGCTG GGGAGCTCCC TGCTGTCCGA GACTTAAAGA AGCTGGAGTT TGCGCTGGGC 
CCTGTCTTGG GCCCACAGGT TTTTCCTAAA CTGGTGAAGA TCCTTGAGGC CTTTACTTCC 
CTTCAGCATC TAGACCTGGA CTCGCTGAGC GAGAACAAGA TTGGGGACGA GGGTGTCGCC 
CAGCTCTCAG CCACCTTCCC TCAGCTGAAG GCCCTGGAGA CACTCAACTT GTCCCAGAAC 
AACATCACCG ACGTGGGTGC CTGCAAGCTG GCCGAGGCTC TGCCCGCGCT GGCCACGTCC 
CTCCTCAGGT TGAGCTTGTA CAATAACTGT ATCTGCGACG CGGGAGCCGA GAGCCTGGCG 
CACGCGCTTC CAGACATGGT GTCCCTCCGG GTGCTGGACG TCCAGTACAA CAAGTTCACA 
GCCGCTGGGG CTCAGCAGCT TGCCGCTGGC CTGAGAAAGT GCCCTCAGGT GAAGACACTG 
GCGATGTGGA CGCCCACCAT CCCCTTTGGC GTCCAGGAAC ACCTGCAGCA GCTGGACCCA 
CGAATCATTC TGAGATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

CIITA ( XM_015460292.1 ) cDNA ORF clone, Bos taurus(cattle) -> XP_015315778.1 Bos taurus class II, major histocompatibility complex, transactivator (CIITA), transcript variant X2, mRNA.

Price & Availability↑

CloneID	OBa88464
Clone ID Related Accession (Same CDS sequence)	XM_015460292.1 , XM_015469298.1
Accession Version	XM_015460292.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3576bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-01-25
Organism	Bos taurus(cattle)
Product	MHC class II transactivator isoform X2
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003104571.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bos taurus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGAATCACT TCCAGACCAT CCTGTCTCAG GTCCGGATGT TGCTCTCTAG CCATCGGCCG 
AGCCAAGTGC AGGCGCTTCT GGACAACCTG CTGGCGGAAG AGCTCCTCTC CAGGGAGTAC 
CACCATGCCC TGCTCCATGA GTCTGATGGT GAGGCTCTGG CCAGGAAGAT CTCCTTGACC 
CTGCTGGAGA AAGGAGACCC AGACTTCGCC CTCTTGGGGT GGATCTGGAG TGGGCTGCAG 
GCCCCCACAG CAGAGAGGGG CCCCAGCTAC AAGGACCCTG GTGGCAGTGG ACAGTGCCCA 
ACCATGGAGC TGGGGCCTCT AGAAGGCAGT TACTTAGAAC TTCTCAACAG CAGTGCTGAC 
CCTTTGCAGC TCTACCACCT CTACGACCGG ATGGATCTGA CAGGAGAAGA AGAAATAGAG 
CTCTGCTCAG AGCCTGACAC AGACACCATC AACTGCGAAC AGTTCAGCAG GCTGTTGTGT 
GACATGGAAG GTGATGAAGA GACCAGGGAA GCTTATGCCA ATATCGCGGA ATTGGACCAG 
TACGTCTTCC AGGACACCCA GCTGGAGGGC CTGAGCAAAG ACATTTTCAT CGAGCACATA 
GGATTGGAAG AAATGATCAG CGAGAGCGTG GAATTGCTGG AGGAGGCAGG GCAGAAAAGT 
CAGAAGAGAC CCGAGCCCCT CACCATGCCC GTGGTGACTG GCACTTTCCT GGTGGGGCCA 
GTGAGCGACT CCTTGGTTCA GCCTTGCCCG CCACCTCCTG CTCTGTTCAA CACGGAGCCA 
GCATCCAGCC AGACCCGGCT GAAGGACGCA GCGCCTCCGT CCAGTTCCTT GTTGAGCTGC 
CTGAGTCTTC CCGCGGGACC CATTCAGATT ATCCCCACTC TCCCCACTCT GCCCCAGGGG 
CTGTGGCCGA TCTCAGGGAC TGGGACGGGG GTCTCCAGTA TACTCATCTA CCAAAGTGAG 
ATGCCCCCGG CCAGCCAAAC ACCCCCATCC AGCGGGCCTG CTGTCCAGAG CCTTCCCAAG 
TCCCCAGACC GGCCTGGCTC TGCCAGCCCC TTTGCCCCGT CTGCCGCTGA CCTCCCCAGC 
ATGCCCGAAC CGGCCCTCAC CTCCCGTGCA GGCCTGACAG AGGATGAGAT GTCCCCCACC 
AAATGCCCAG CAGCTGGCGG GGCCTCCAGC AAACTTCCCA AGTGGCCTGA GAGCGTGGAG 
CAGTTCTACC AGTCGCTACG GGACAAGTAC CAGGCCCAGC CCACCGGCCC GGAAGGCACC 
CTGGTGGACA TGGACCTGGT GAGGGTGAGG CTGGAGAAGA GCAGCGGGAA GAGCCAGGAG 
AGAGAGCTGG CCACCCTGGA CTGGGCAGAG CGGCAGCCGG CCCGAGGGGG TCTGGCCGAG 
GTGCTGCTGG CCGCCAGCGA CCGCCAGCAG CCCCGGGAGA CGCGGGTGAT CGCTGTGCTG 
GGCAAAGCGG GACATGGGAA GAGTCACTGG GCCCGGGCCG TGAGCCGGGC CTGGGCCCAC 
GGCCAGCTGC CACAGTACGA CTTTGTCTTC TGTGTCCCCT GCCATCGTTT GGACCGTCCG 
GGGACCTCCT ACCGCCTGCA GGATCTGCTG TCCTCCCTGG GCCCGCAGCC GTTGCCAGTG 
GACGACGAGG TCCTCAGTTA CATTGCGAGG AGACCCAACC GCATCCTGCT CATCCTGGAT 
GGCTTCGAGG ACCTGGAAGC CCACGATGGC TCCCTGCACA GCACAGGAGG CCCCGGGTCG 
GCAGAGCCCC GCTCCCTCCG GGGGCTGCTG GCGGGCCTCC TCCAGCGCAA GCTGCTGCGG 
GGCTGCACCC TGCTGCTCAC GGCCTGGCCC CGGGGCCGCC TGGCCCAGAG CCTGAGCAAG 
GTGGACGCCC TGTTTGAGGT GGCCGGCTTC TCGGCCCAGC AGGTTGAGAC CTATGTGAGG 
CGTTACTTTG AGTCGGAGGG GACCGCTGAG CACCAAGAGA GAGCCCTGGC GCTCCTGCAG 
GCCCGGCCGT TCCTCCTGAG CCACAGCCAC AGCCCCACCG TGTGCCGGAC CGTGTGCCAG 
CTCGCAGAGG CCCTCCTGCA GCGGAGTGAT GAAGCCCAGC TGCCCTCCAC GCTCACGGGC 
CTCTACGTGG GCCTGCTAGG CCCAGCAGCT CGAGATAGCC CCCCAGGGGC CCTGGCGGAA 
CTGGCCAGGC TGGCCTGGGA GCTGGGCCGT GTGCACCAGA GGGGCCTGAA GGCGGGCTGT 
TTACCGTCGG CGGAGGCGAG GGCCTGGGCT GTGGCCCAAG GCTGGTTGCG GCCCACCCCG 
GGGGCCCCAG AGACGGAGCT GGCCTTCTCC AGCTTCCTCC TGCAGTGCTT CCTGGGGGCT 
GTGTGGCTGG CTCTGAGCGG CGAAATCAAG GACAAGGAGC TGCCGCAGTA TCTGGCCTTG 
ACCCCGAGGA AGAAGCGGCC CTATGACAAC TGGCTGGAGG GCGTGCCGCG CTTCTTGGTC 
GGACTGGTCT TCCAGCCTCG CGCCGGCTGC CTGGGGGCCC TGGCAGGGCC GGCGGCCACC 
ACGTCAGCGG ACAGGAAGCA GAAGGTGCTC ACGAGGTACC TGAAGCGTCT GCAGCCCGGG 
ACGCTGCAGG CGGGGCGGCT GCTGGAGCTG CTGCACTGTG CCCACGAGGC GCTGGACCCC 
GGGCTCTGGC AGCACGTGCT GCAGGGGCTC CCTGCCCGCC TCTCCTTCCT GGGCACACGG 
CTCACGCCTC CTGACACCCA TGTGCTGGGC AGCGCCCTGG AGGCCGCGGG CCGAGACTTT 
TCCCTGGACC TCCGCAGCAC TGGCGTCGAC GCCTCTGGAC TGGGGAGCCT CGTGGGACTC 
AGCTGTGTCA CCCGTTTCAG GGCTGCATTG AGTGACACTG TGGAGCTATG GGAGTCCCTG 
CAGCAGCGTG GGGAGGCCAA GCTACTCCGG GCAGTGGAGG AGAAGTTCAC CATCGAGCCT 
TTCAAGGCCA AGTCCATGAA GGATGTGGAA GACCTTGGCA ATCTCGTGCA GATCCAGAGG 
ACAAGAAGCT CCTCTGAAGC AGCAGCTGGG GAGCTCCCTG CTGTCCGAGA CTTAAAGAAG 
CTGGAGTTTG CGCTGGGCCC TGTCTTGGGC CCACAGGTTT TTCCTAAACT GGTGAAGATC 
CTTGAGGCCT TTACTTCCCT TCAGCATCTA GACCTGGACT CGCTGAGCGA GAACAAGATT 
GGGGACGAGG GTGTCGCCCA GCTCTCAGCC ACCTTCCCTC AGCTGAAGGC CCTGGAGACA 
CTCAACTTGT CCCAGAACAA CATCACCGAC GTGGGTGCCT GCAAGCTGGC CGAGGCTCTG 
CCCGCGCTGG CCACGTCCCT CCTCAGGTTG AGCTTGTACA ATAACTGTAT CTGCGACGCG 
GGAGCCGAGA GCCTGGCGCA CGCGCTTCCA GACATGGTGT CCCTCCGGGT GCTGGACGTC 
CAGTACAACA AGTTCACAGC CGCTGGGGCT CAGCAGCTTG CCGCTGGCCT GAGAAAGTGC 
CCTCAGGTGA AGACACTGGC GATGTGGACG CCCACCATCC CCTTTGGCGT CCAGGAACAC 
CTGCAGCAGC TGGACCCACG AATCATTCTG AGATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_015315778.1
CDS	266..3841
Translation	MNHFQTILSQVRMLLSSHRPSQVQALLDNLLAEELLSREYHHALLHESDGEALARKISLTLLEKGDPDFALLGWIWSGLQAPTAERGPSYKDPGGSGQCPTMELGPLEGSYLELLNSSADPLQLYHLYDRMDLTGEEEIELCSEPDTDTINCEQFSRLLCDMEGDEETREAYANIAELDQYVFQDTQLEGLSKDIFIEHIGLEEMISESVELLEEAGQKSQKRPEPLTMPVVTGTFLVGPVSDSLVQPCPPPPALFNTEPASSQTRLKDAAPPSSSLLSCLSLPAGPIQIIPTLPTLPQGLWPISGTGTGVSSILIYQSEMPPASQTPPSSGPAVQSLPKSPDRPGSASPFAPSAADLPSMPEPALTSRAGLTEDEMSPTKCPAAGGASSKLPKWPESVEQFYQSLRDKYQAQPTGPEGTLVDMDLVRVRLEKSSGKSQERELATLDWAERQPARGGLAEVLLAASDRQQPRETRVIAVLGKAGHGKSHWARAVSRAWAHGQLPQYDFVFCVPCHRLDRPGTSYRLQDLLSSLGPQPLPVDDEVLSYIARRPNRILLILDGFEDLEAHDGSLHSTGGPGSAEPRSLRGLLAGLLQRKLLRGCTLLLTAWPRGRLAQSLSKVDALFEVAGFSAQQVETYVRRYFESEGTAEHQERALALLQARPFLLSHSHSPTVCRTVCQLAEALLQRSDEAQLPSTLTGLYVGLLGPAARDSPPGALAELARLAWELGRVHQRGLKAGCLPSAEARAWAVAQGWLRPTPGAPETELAFSSFLLQCFLGAVWLALSGEIKDKELPQYLALTPRKKRPYDNWLEGVPRFLVGLVFQPRAGCLGALAGPAATTSADRKQKVLTRYLKRLQPGTLQAGRLLELLHCAHEALDPGLWQHVLQGLPARLSFLGTRLTPPDTHVLGSALEAAGRDFSLDLRSTGVDASGLGSLVGLSCVTRFRAALSDTVELWESLQQRGEAKLLRAVEEKFTIEPFKAKSMKDVEDLGNLVQIQRTRSSSEAAAGELPAVRDLKKLEFALGPVLGPQVFPKLVKILEAFTSLQHLDLDSLSENKIGDEGVAQLSATFPQLKALETLNLSQNNITDVGACKLAEALPALATSLLRLSLYNNCICDAGAESLAHALPDMVSLRVLDVQYNKFTAAGAQQLAAGLRKCPQVKTLAMWTPTIPFGVQEHLQQLDPRIILR

Target ORF information:

RefSeq Version	XM_015460292.1
Organism	Bos taurus(cattle)
Definition	Bos taurus class II, major histocompatibility complex, transactivator (CIITA), transcript variant X2, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_015460292.1

ORF Insert Sequence:

ATGAATCACT TCCAGACCAT CCTGTCTCAG GTCCGGATGT TGCTCTCTAG CCATCGGCCG 
AGCCAAGTGC AGGCGCTTCT GGACAACCTG CTGGCGGAAG AGCTCCTCTC CAGGGAGTAC 
CACCATGCCC TGCTCCATGA GTCTGATGGT GAGGCTCTGG CCAGGAAGAT CTCCTTGACC 
CTGCTGGAGA AAGGAGACCC AGACTTCGCC CTCTTGGGGT GGATCTGGAG TGGGCTGCAG 
GCCCCCACAG CAGAGAGGGG CCCCAGCTAC AAGGACCCTG GTGGCAGTGG ACAGTGCCCA 
ACCATGGAGC TGGGGCCTCT AGAAGGCAGT TACTTAGAAC TTCTCAACAG CAGTGCTGAC 
CCTTTGCAGC TCTACCACCT CTACGACCGG ATGGATCTGA CAGGAGAAGA AGAAATAGAG 
CTCTGCTCAG AGCCTGACAC AGACACCATC AACTGCGAAC AGTTCAGCAG GCTGTTGTGT 
GACATGGAAG GTGATGAAGA GACCAGGGAA GCTTATGCCA ATATCGCGGA ATTGGACCAG 
TACGTCTTCC AGGACACCCA GCTGGAGGGC CTGAGCAAAG ACATTTTCAT CGAGCACATA 
GGATTGGAAG AAATGATCAG CGAGAGCGTG GAATTGCTGG AGGAGGCAGG GCAGAAAAGT 
CAGAAGAGAC CCGAGCCCCT CACCATGCCC GTGGTGACTG GCACTTTCCT GGTGGGGCCA 
GTGAGCGACT CCTTGGTTCA GCCTTGCCCG CCACCTCCTG CTCTGTTCAA CACGGAGCCA 
GCATCCAGCC AGACCCGGCT GAAGGACGCA GCGCCTCCGT CCAGTTCCTT GTTGAGCTGC 
CTGAGTCTTC CCGCGGGACC CATTCAGATT ATCCCCACTC TCCCCACTCT GCCCCAGGGG 
CTGTGGCCGA TCTCAGGGAC TGGGACGGGG GTCTCCAGTA TACTCATCTA CCAAAGTGAG 
ATGCCCCCGG CCAGCCAAAC ACCCCCATCC AGCGGGCCTG CTGTCCAGAG CCTTCCCAAG 
TCCCCAGACC GGCCTGGCTC TGCCAGCCCC TTTGCCCCGT CTGCCGCTGA CCTCCCCAGC 
ATGCCCGAAC CGGCCCTCAC CTCCCGTGCA GGCCTGACAG AGGATGAGAT GTCCCCCACC 
AAATGCCCAG CAGCTGGCGG GGCCTCCAGC AAACTTCCCA AGTGGCCTGA GAGCGTGGAG 
CAGTTCTACC AGTCGCTACG GGACAAGTAC CAGGCCCAGC CCACCGGCCC GGAAGGCACC 
CTGGTGGACA TGGACCTGGT GAGGGTGAGG CTGGAGAAGA GCAGCGGGAA GAGCCAGGAG 
AGAGAGCTGG CCACCCTGGA CTGGGCAGAG CGGCAGCCGG CCCGAGGGGG TCTGGCCGAG 
GTGCTGCTGG CCGCCAGCGA CCGCCAGCAG CCCCGGGAGA CGCGGGTGAT CGCTGTGCTG 
GGCAAAGCGG GACATGGGAA GAGTCACTGG GCCCGGGCCG TGAGCCGGGC CTGGGCCCAC 
GGCCAGCTGC CACAGTACGA CTTTGTCTTC TGTGTCCCCT GCCATCGTTT GGACCGTCCG 
GGGACCTCCT ACCGCCTGCA GGATCTGCTG TCCTCCCTGG GCCCGCAGCC GTTGCCAGTG 
GACGACGAGG TCCTCAGTTA CATTGCGAGG AGACCCAACC GCATCCTGCT CATCCTGGAT 
GGCTTCGAGG ACCTGGAAGC CCACGATGGC TCCCTGCACA GCACAGGAGG CCCCGGGTCG 
GCAGAGCCCC GCTCCCTCCG GGGGCTGCTG GCGGGCCTCC TCCAGCGCAA GCTGCTGCGG 
GGCTGCACCC TGCTGCTCAC GGCCTGGCCC CGGGGCCGCC TGGCCCAGAG CCTGAGCAAG 
GTGGACGCCC TGTTTGAGGT GGCCGGCTTC TCGGCCCAGC AGGTTGAGAC CTATGTGAGG 
CGTTACTTTG AGTCGGAGGG GACCGCTGAG CACCAAGAGA GAGCCCTGGC GCTCCTGCAG 
GCCCGGCCGT TCCTCCTGAG CCACAGCCAC AGCCCCACCG TGTGCCGGAC CGTGTGCCAG 
CTCGCAGAGG CCCTCCTGCA GCGGAGTGAT GAAGCCCAGC TGCCCTCCAC GCTCACGGGC 
CTCTACGTGG GCCTGCTAGG CCCAGCAGCT CGAGATAGCC CCCCAGGGGC CCTGGCGGAA 
CTGGCCAGGC TGGCCTGGGA GCTGGGCCGT GTGCACCAGA GGGGCCTGAA GGCGGGCTGT 
TTACCGTCGG CGGAGGCGAG GGCCTGGGCT GTGGCCCAAG GCTGGTTGCG GCCCACCCCG 
GGGGCCCCAG AGACGGAGCT GGCCTTCTCC AGCTTCCTCC TGCAGTGCTT CCTGGGGGCT 
GTGTGGCTGG CTCTGAGCGG CGAAATCAAG GACAAGGAGC TGCCGCAGTA TCTGGCCTTG 
ACCCCGAGGA AGAAGCGGCC CTATGACAAC TGGCTGGAGG GCGTGCCGCG CTTCTTGGTC 
GGACTGGTCT TCCAGCCTCG CGCCGGCTGC CTGGGGGCCC TGGCAGGGCC GGCGGCCACC 
ACGTCAGCGG ACAGGAAGCA GAAGGTGCTC ACGAGGTACC TGAAGCGTCT GCAGCCCGGG 
ACGCTGCAGG CGGGGCGGCT GCTGGAGCTG CTGCACTGTG CCCACGAGGC GCTGGACCCC 
GGGCTCTGGC AGCACGTGCT GCAGGGGCTC CCTGCCCGCC TCTCCTTCCT GGGCACACGG 
CTCACGCCTC CTGACACCCA TGTGCTGGGC AGCGCCCTGG AGGCCGCGGG CCGAGACTTT 
TCCCTGGACC TCCGCAGCAC TGGCGTCGAC GCCTCTGGAC TGGGGAGCCT CGTGGGACTC 
AGCTGTGTCA CCCGTTTCAG GGCTGCATTG AGTGACACTG TGGAGCTATG GGAGTCCCTG 
CAGCAGCGTG GGGAGGCCAA GCTACTCCGG GCAGTGGAGG AGAAGTTCAC CATCGAGCCT 
TTCAAGGCCA AGTCCATGAA GGATGTGGAA GACCTTGGCA ATCTCGTGCA GATCCAGAGG 
ACAAGAAGCT CCTCTGAAGC AGCAGCTGGG GAGCTCCCTG CTGTCCGAGA CTTAAAGAAG 
CTGGAGTTTG CGCTGGGCCC TGTCTTGGGC CCACAGGTTT TTCCTAAACT GGTGAAGATC 
CTTGAGGCCT TTACTTCCCT TCAGCATCTA GACCTGGACT CGCTGAGCGA GAACAAGATT 
GGGGACGAGG GTGTCGCCCA GCTCTCAGCC ACCTTCCCTC AGCTGAAGGC CCTGGAGACA 
CTCAACTTGT CCCAGAACAA CATCACCGAC GTGGGTGCCT GCAAGCTGGC CGAGGCTCTG 
CCCGCGCTGG CCACGTCCCT CCTCAGGTTG AGCTTGTACA ATAACTGTAT CTGCGACGCG 
GGAGCCGAGA GCCTGGCGCA CGCGCTTCCA GACATGGTGT CCCTCCGGGT GCTGGACGTC 
CAGTACAACA AGTTCACAGC CGCTGGGGCT CAGCAGCTTG CCGCTGGCCT GAGAAAGTGC 
CCTCAGGTGA AGACACTGGC GATGTGGACG CCCACCATCC CCTTTGGCGT CCAGGAACAC 
CTGCAGCAGC TGGACCCACG AATCATTCTG AGATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

CIITA ( XM_015469298.1 ) cDNA ORF clone, Bos taurus(cattle) -> XP_015324784.1 Bos taurus class II, major histocompatibility complex, transactivator (CIITA), transcript variant X2, mRNA.

Price & Availability↑

CloneID	OBa88464
Clone ID Related Accession (Same CDS sequence)	XM_015460292.1 , XM_015469298.1
Accession Version	XM_015469298.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3576bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-01-25
Organism	Bos taurus(cattle)
Product	MHC class II transactivator isoform X2
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_014646645.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bos taurus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGAATCACT TCCAGACCAT CCTGTCTCAG GTCCGGATGT TGCTCTCTAG CCATCGGCCG 
AGCCAAGTGC AGGCGCTTCT GGACAACCTG CTGGCGGAAG AGCTCCTCTC CAGGGAGTAC 
CACCATGCCC TGCTCCATGA GTCTGATGGT GAGGCTCTGG CCAGGAAGAT CTCCTTGACC 
CTGCTGGAGA AAGGAGACCC AGACTTCGCC CTCTTGGGGT GGATCTGGAG TGGGCTGCAG 
GCCCCCACAG CAGAGAGGGG CCCCAGCTAC AAGGACCCTG GTGGCAGTGG ACAGTGCCCA 
ACCATGGAGC TGGGGCCTCT AGAAGGCAGT TACTTAGAAC TTCTCAACAG CAGTGCTGAC 
CCTTTGCAGC TCTACCACCT CTACGACCGG ATGGATCTGA CAGGAGAAGA AGAAATAGAG 
CTCTGCTCAG AGCCTGACAC AGACACCATC AACTGCGAAC AGTTCAGCAG GCTGTTGTGT 
GACATGGAAG GTGATGAAGA GACCAGGGAA GCTTATGCCA ATATCGCGGA ATTGGACCAG 
TACGTCTTCC AGGACACCCA GCTGGAGGGC CTGAGCAAAG ACATTTTCAT CGAGCACATA 
GGATTGGAAG AAATGATCAG CGAGAGCGTG GAATTGCTGG AGGAGGCAGG GCAGAAAAGT 
CAGAAGAGAC CCGAGCCCCT CACCATGCCC GTGGTGACTG GCACTTTCCT GGTGGGGCCA 
GTGAGCGACT CCTTGGTTCA GCCTTGCCCG CCACCTCCTG CTCTGTTCAA CACGGAGCCA 
GCATCCAGCC AGACCCGGCT GAAGGACGCA GCGCCTCCGT CCAGTTCCTT GTTGAGCTGC 
CTGAGTCTTC CCGCGGGACC CATTCAGATT ATCCCCACTC TCCCCACTCT GCCCCAGGGG 
CTGTGGCCGA TCTCAGGGAC TGGGACGGGG GTCTCCAGTA TACTCATCTA CCAAAGTGAG 
ATGCCCCCGG CCAGCCAAAC ACCCCCATCC AGCGGGCCTG CTGTCCAGAG CCTTCCCAAG 
TCCCCAGACC GGCCTGGCTC TGCCAGCCCC TTTGCCCCGT CTGCCGCTGA CCTCCCCAGC 
ATGCCCGAAC CGGCCCTCAC CTCCCGTGCA GGCCTGACAG AGGATGAGAT GTCCCCCACC 
AAATGCCCAG CAGCTGGCGG GGCCTCCAGC AAACTTCCCA AGTGGCCTGA GAGCGTGGAG 
CAGTTCTACC AGTCGCTACG GGACAAGTAC CAGGCCCAGC CCACCGGCCC GGAAGGCACC 
CTGGTGGACA TGGACCTGGT GAGGGTGAGG CTGGAGAAGA GCAGCGGGAA GAGCCAGGAG 
AGAGAGCTGG CCACCCTGGA CTGGGCAGAG CGGCAGCCGG CCCGAGGGGG TCTGGCCGAG 
GTGCTGCTGG CCGCCAGCGA CCGCCAGCAG CCCCGGGAGA CGCGGGTGAT CGCTGTGCTG 
GGCAAAGCGG GACATGGGAA GAGTCACTGG GCCCGGGCCG TGAGCCGGGC CTGGGCCCAC 
GGCCAGCTGC CACAGTACGA CTTTGTCTTC TGTGTCCCCT GCCATCGTTT GGACCGTCCG 
GGGACCTCCT ACCGCCTGCA GGATCTGCTG TCCTCCCTGG GCCCGCAGCC GTTGCCAGTG 
GACGACGAGG TCCTCAGTTA CATTGCGAGG AGACCCAACC GCATCCTGCT CATCCTGGAT 
GGCTTCGAGG ACCTGGAAGC CCACGATGGC TCCCTGCACA GCACAGGAGG CCCCGGGTCG 
GCAGAGCCCC GCTCCCTCCG GGGGCTGCTG GCGGGCCTCC TCCAGCGCAA GCTGCTGCGG 
GGCTGCACCC TGCTGCTCAC GGCCTGGCCC CGGGGCCGCC TGGCCCAGAG CCTGAGCAAG 
GTGGACGCCC TGTTTGAGGT GGCCGGCTTC TCGGCCCAGC AGGTTGAGAC CTATGTGAGG 
CGTTACTTTG AGTCGGAGGG GACCGCTGAG CACCAAGAGA GAGCCCTGGC GCTCCTGCAG 
GCCCGGCCGT TCCTCCTGAG CCACAGCCAC AGCCCCACCG TGTGCCGGAC CGTGTGCCAG 
CTCGCAGAGG CCCTCCTGCA GCGGAGTGAT GAAGCCCAGC TGCCCTCCAC GCTCACGGGC 
CTCTACGTGG GCCTGCTAGG CCCAGCAGCT CGAGATAGCC CCCCAGGGGC CCTGGCGGAA 
CTGGCCAGGC TGGCCTGGGA GCTGGGCCGT GTGCACCAGA GGGGCCTGAA GGCGGGCTGT 
TTACCGTCGG CGGAGGCGAG GGCCTGGGCT GTGGCCCAAG GCTGGTTGCG GCCCACCCCG 
GGGGCCCCAG AGACGGAGCT GGCCTTCTCC AGCTTCCTCC TGCAGTGCTT CCTGGGGGCT 
GTGTGGCTGG CTCTGAGCGG CGAAATCAAG GACAAGGAGC TGCCGCAGTA TCTGGCCTTG 
ACCCCGAGGA AGAAGCGGCC CTATGACAAC TGGCTGGAGG GCGTGCCGCG CTTCTTGGTC 
GGACTGGTCT TCCAGCCTCG CGCCGGCTGC CTGGGGGCCC TGGCAGGGCC GGCGGCCACC 
ACGTCAGCGG ACAGGAAGCA GAAGGTGCTC ACGAGGTACC TGAAGCGTCT GCAGCCCGGG 
ACGCTGCAGG CGGGGCGGCT GCTGGAGCTG CTGCACTGTG CCCACGAGGC GCTGGACCCC 
GGGCTCTGGC AGCACGTGCT GCAGGGGCTC CCTGCCCGCC TCTCCTTCCT GGGCACACGG 
CTCACGCCTC CTGACACCCA TGTGCTGGGC AGCGCCCTGG AGGCCGCGGG CCGAGACTTT 
TCCCTGGACC TCCGCAGCAC TGGCGTCGAC GCCTCTGGAC TGGGGAGCCT CGTGGGACTC 
AGCTGTGTCA CCCGTTTCAG GGCTGCATTG AGTGACACTG TGGAGCTATG GGAGTCCCTG 
CAGCAGCGTG GGGAGGCCAA GCTACTCCGG GCAGTGGAGG AGAAGTTCAC CATCGAGCCT 
TTCAAGGCCA AGTCCATGAA GGATGTGGAA GACCTTGGCA ATCTCGTGCA GATCCAGAGG 
ACAAGAAGCT CCTCTGAAGC AGCAGCTGGG GAGCTCCCTG CTGTCCGAGA CTTAAAGAAG 
CTGGAGTTTG CGCTGGGCCC TGTCTTGGGC CCACAGGTTT TTCCTAAACT GGTGAAGATC 
CTTGAGGCCT TTACTTCCCT TCAGCATCTA GACCTGGACT CGCTGAGCGA GAACAAGATT 
GGGGACGAGG GTGTCGCCCA GCTCTCAGCC ACCTTCCCTC AGCTGAAGGC CCTGGAGACA 
CTCAACTTGT CCCAGAACAA CATCACCGAC GTGGGTGCCT GCAAGCTGGC CGAGGCTCTG 
CCCGCGCTGG CCACGTCCCT CCTCAGGTTG AGCTTGTACA ATAACTGTAT CTGCGACGCG 
GGAGCCGAGA GCCTGGCGCA CGCGCTTCCA GACATGGTGT CCCTCCGGGT GCTGGACGTC 
CAGTACAACA AGTTCACAGC CGCTGGGGCT CAGCAGCTTG CCGCTGGCCT GAGAAAGTGC 
CCTCAGGTGA AGACACTGGC GATGTGGACG CCCACCATCC CCTTTGGCGT CCAGGAACAC 
CTGCAGCAGC TGGACCCACG AATCATTCTG AGATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_015324784.1
CDS	266..3841
Translation	MNHFQTILSQVRMLLSSHRPSQVQALLDNLLAEELLSREYHHALLHESDGEALARKISLTLLEKGDPDFALLGWIWSGLQAPTAERGPSYKDPGGSGQCPTMELGPLEGSYLELLNSSADPLQLYHLYDRMDLTGEEEIELCSEPDTDTINCEQFSRLLCDMEGDEETREAYANIAELDQYVFQDTQLEGLSKDIFIEHIGLEEMISESVELLEEAGQKSQKRPEPLTMPVVTGTFLVGPVSDSLVQPCPPPPALFNTEPASSQTRLKDAAPPSSSLLSCLSLPAGPIQIIPTLPTLPQGLWPISGTGTGVSSILIYQSEMPPASQTPPSSGPAVQSLPKSPDRPGSASPFAPSAADLPSMPEPALTSRAGLTEDEMSPTKCPAAGGASSKLPKWPESVEQFYQSLRDKYQAQPTGPEGTLVDMDLVRVRLEKSSGKSQERELATLDWAERQPARGGLAEVLLAASDRQQPRETRVIAVLGKAGHGKSHWARAVSRAWAHGQLPQYDFVFCVPCHRLDRPGTSYRLQDLLSSLGPQPLPVDDEVLSYIARRPNRILLILDGFEDLEAHDGSLHSTGGPGSAEPRSLRGLLAGLLQRKLLRGCTLLLTAWPRGRLAQSLSKVDALFEVAGFSAQQVETYVRRYFESEGTAEHQERALALLQARPFLLSHSHSPTVCRTVCQLAEALLQRSDEAQLPSTLTGLYVGLLGPAARDSPPGALAELARLAWELGRVHQRGLKAGCLPSAEARAWAVAQGWLRPTPGAPETELAFSSFLLQCFLGAVWLALSGEIKDKELPQYLALTPRKKRPYDNWLEGVPRFLVGLVFQPRAGCLGALAGPAATTSADRKQKVLTRYLKRLQPGTLQAGRLLELLHCAHEALDPGLWQHVLQGLPARLSFLGTRLTPPDTHVLGSALEAAGRDFSLDLRSTGVDASGLGSLVGLSCVTRFRAALSDTVELWESLQQRGEAKLLRAVEEKFTIEPFKAKSMKDVEDLGNLVQIQRTRSSSEAAAGELPAVRDLKKLEFALGPVLGPQVFPKLVKILEAFTSLQHLDLDSLSENKIGDEGVAQLSATFPQLKALETLNLSQNNITDVGACKLAEALPALATSLLRLSLYNNCICDAGAESLAHALPDMVSLRVLDVQYNKFTAAGAQQLAAGLRKCPQVKTLAMWTPTIPFGVQEHLQQLDPRIILR

Target ORF information:

RefSeq Version	XM_015469298.1
Organism	Bos taurus(cattle)
Definition	Bos taurus class II, major histocompatibility complex, transactivator (CIITA), transcript variant X2, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_015469298.1

ORF Insert Sequence:

ATGAATCACT TCCAGACCAT CCTGTCTCAG GTCCGGATGT TGCTCTCTAG CCATCGGCCG 
AGCCAAGTGC AGGCGCTTCT GGACAACCTG CTGGCGGAAG AGCTCCTCTC CAGGGAGTAC 
CACCATGCCC TGCTCCATGA GTCTGATGGT GAGGCTCTGG CCAGGAAGAT CTCCTTGACC 
CTGCTGGAGA AAGGAGACCC AGACTTCGCC CTCTTGGGGT GGATCTGGAG TGGGCTGCAG 
GCCCCCACAG CAGAGAGGGG CCCCAGCTAC AAGGACCCTG GTGGCAGTGG ACAGTGCCCA 
ACCATGGAGC TGGGGCCTCT AGAAGGCAGT TACTTAGAAC TTCTCAACAG CAGTGCTGAC 
CCTTTGCAGC TCTACCACCT CTACGACCGG ATGGATCTGA CAGGAGAAGA AGAAATAGAG 
CTCTGCTCAG AGCCTGACAC AGACACCATC AACTGCGAAC AGTTCAGCAG GCTGTTGTGT 
GACATGGAAG GTGATGAAGA GACCAGGGAA GCTTATGCCA ATATCGCGGA ATTGGACCAG 
TACGTCTTCC AGGACACCCA GCTGGAGGGC CTGAGCAAAG ACATTTTCAT CGAGCACATA 
GGATTGGAAG AAATGATCAG CGAGAGCGTG GAATTGCTGG AGGAGGCAGG GCAGAAAAGT 
CAGAAGAGAC CCGAGCCCCT CACCATGCCC GTGGTGACTG GCACTTTCCT GGTGGGGCCA 
GTGAGCGACT CCTTGGTTCA GCCTTGCCCG CCACCTCCTG CTCTGTTCAA CACGGAGCCA 
GCATCCAGCC AGACCCGGCT GAAGGACGCA GCGCCTCCGT CCAGTTCCTT GTTGAGCTGC 
CTGAGTCTTC CCGCGGGACC CATTCAGATT ATCCCCACTC TCCCCACTCT GCCCCAGGGG 
CTGTGGCCGA TCTCAGGGAC TGGGACGGGG GTCTCCAGTA TACTCATCTA CCAAAGTGAG 
ATGCCCCCGG CCAGCCAAAC ACCCCCATCC AGCGGGCCTG CTGTCCAGAG CCTTCCCAAG 
TCCCCAGACC GGCCTGGCTC TGCCAGCCCC TTTGCCCCGT CTGCCGCTGA CCTCCCCAGC 
ATGCCCGAAC CGGCCCTCAC CTCCCGTGCA GGCCTGACAG AGGATGAGAT GTCCCCCACC 
AAATGCCCAG CAGCTGGCGG GGCCTCCAGC AAACTTCCCA AGTGGCCTGA GAGCGTGGAG 
CAGTTCTACC AGTCGCTACG GGACAAGTAC CAGGCCCAGC CCACCGGCCC GGAAGGCACC 
CTGGTGGACA TGGACCTGGT GAGGGTGAGG CTGGAGAAGA GCAGCGGGAA GAGCCAGGAG 
AGAGAGCTGG CCACCCTGGA CTGGGCAGAG CGGCAGCCGG CCCGAGGGGG TCTGGCCGAG 
GTGCTGCTGG CCGCCAGCGA CCGCCAGCAG CCCCGGGAGA CGCGGGTGAT CGCTGTGCTG 
GGCAAAGCGG GACATGGGAA GAGTCACTGG GCCCGGGCCG TGAGCCGGGC CTGGGCCCAC 
GGCCAGCTGC CACAGTACGA CTTTGTCTTC TGTGTCCCCT GCCATCGTTT GGACCGTCCG 
GGGACCTCCT ACCGCCTGCA GGATCTGCTG TCCTCCCTGG GCCCGCAGCC GTTGCCAGTG 
GACGACGAGG TCCTCAGTTA CATTGCGAGG AGACCCAACC GCATCCTGCT CATCCTGGAT 
GGCTTCGAGG ACCTGGAAGC CCACGATGGC TCCCTGCACA GCACAGGAGG CCCCGGGTCG 
GCAGAGCCCC GCTCCCTCCG GGGGCTGCTG GCGGGCCTCC TCCAGCGCAA GCTGCTGCGG 
GGCTGCACCC TGCTGCTCAC GGCCTGGCCC CGGGGCCGCC TGGCCCAGAG CCTGAGCAAG 
GTGGACGCCC TGTTTGAGGT GGCCGGCTTC TCGGCCCAGC AGGTTGAGAC CTATGTGAGG 
CGTTACTTTG AGTCGGAGGG GACCGCTGAG CACCAAGAGA GAGCCCTGGC GCTCCTGCAG 
GCCCGGCCGT TCCTCCTGAG CCACAGCCAC AGCCCCACCG TGTGCCGGAC CGTGTGCCAG 
CTCGCAGAGG CCCTCCTGCA GCGGAGTGAT GAAGCCCAGC TGCCCTCCAC GCTCACGGGC 
CTCTACGTGG GCCTGCTAGG CCCAGCAGCT CGAGATAGCC CCCCAGGGGC CCTGGCGGAA 
CTGGCCAGGC TGGCCTGGGA GCTGGGCCGT GTGCACCAGA GGGGCCTGAA GGCGGGCTGT 
TTACCGTCGG CGGAGGCGAG GGCCTGGGCT GTGGCCCAAG GCTGGTTGCG GCCCACCCCG 
GGGGCCCCAG AGACGGAGCT GGCCTTCTCC AGCTTCCTCC TGCAGTGCTT CCTGGGGGCT 
GTGTGGCTGG CTCTGAGCGG CGAAATCAAG GACAAGGAGC TGCCGCAGTA TCTGGCCTTG 
ACCCCGAGGA AGAAGCGGCC CTATGACAAC TGGCTGGAGG GCGTGCCGCG CTTCTTGGTC 
GGACTGGTCT TCCAGCCTCG CGCCGGCTGC CTGGGGGCCC TGGCAGGGCC GGCGGCCACC 
ACGTCAGCGG ACAGGAAGCA GAAGGTGCTC ACGAGGTACC TGAAGCGTCT GCAGCCCGGG 
ACGCTGCAGG CGGGGCGGCT GCTGGAGCTG CTGCACTGTG CCCACGAGGC GCTGGACCCC 
GGGCTCTGGC AGCACGTGCT GCAGGGGCTC CCTGCCCGCC TCTCCTTCCT GGGCACACGG 
CTCACGCCTC CTGACACCCA TGTGCTGGGC AGCGCCCTGG AGGCCGCGGG CCGAGACTTT 
TCCCTGGACC TCCGCAGCAC TGGCGTCGAC GCCTCTGGAC TGGGGAGCCT CGTGGGACTC 
AGCTGTGTCA CCCGTTTCAG GGCTGCATTG AGTGACACTG TGGAGCTATG GGAGTCCCTG 
CAGCAGCGTG GGGAGGCCAA GCTACTCCGG GCAGTGGAGG AGAAGTTCAC CATCGAGCCT 
TTCAAGGCCA AGTCCATGAA GGATGTGGAA GACCTTGGCA ATCTCGTGCA GATCCAGAGG 
ACAAGAAGCT CCTCTGAAGC AGCAGCTGGG GAGCTCCCTG CTGTCCGAGA CTTAAAGAAG 
CTGGAGTTTG CGCTGGGCCC TGTCTTGGGC CCACAGGTTT TTCCTAAACT GGTGAAGATC 
CTTGAGGCCT TTACTTCCCT TCAGCATCTA GACCTGGACT CGCTGAGCGA GAACAAGATT 
GGGGACGAGG GTGTCGCCCA GCTCTCAGCC ACCTTCCCTC AGCTGAAGGC CCTGGAGACA 
CTCAACTTGT CCCAGAACAA CATCACCGAC GTGGGTGCCT GCAAGCTGGC CGAGGCTCTG 
CCCGCGCTGG CCACGTCCCT CCTCAGGTTG AGCTTGTACA ATAACTGTAT CTGCGACGCG 
GGAGCCGAGA GCCTGGCGCA CGCGCTTCCA GACATGGTGT CCCTCCGGGT GCTGGACGTC 
CAGTACAACA AGTTCACAGC CGCTGGGGCT CAGCAGCTTG CCGCTGGCCT GAGAAAGTGC 
CCTCAGGTGA AGACACTGGC GATGTGGACG CCCACCATCC CCTTTGGCGT CCAGGAACAC 
CTGCAGCAGC TGGACCCACG AATCATTCTG AGATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

CIITA ( XM_010819257.2 ) cDNA ORF clone, Bos taurus(cattle) -> XP_010817559.1 Bos taurus class II, major histocompatibility complex, transactivator (CIITA), transcript variant X4, mRNA.

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CloneID	OBa11814
Clone ID Related Accession (Same CDS sequence)	XM_010819257.2 , XM_010819257.3 , XM_005196914.3
Accession Version	XM_010819257.2	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3390bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-01-25
Organism	Bos taurus(cattle)
Product	MHC class II transactivator isoform X4
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003104571.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jan 26, 2016 this sequence version replaced XM_010819257.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bos taurus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGCGTTGCC TGGCTCCACG CCCTGCCGGG TCCTACCTGC CAGAGCCCCA AGGCAGTGGA 
CAGTGCCCAA CCATGGAGCT GGGGCCTCTA GAAGGCAGTT ACTTAGAACT TCTCAACAGC 
AGTGCTGACC CTTTGCAGCT CTACCACCTC TACGACCGGA TGGATCTGAC AGGAGAAGAA 
GAAATAGAGC TCTGCTCAGA GCCTGACACA GACACCATCA ACTGCGAACA GTTCAGCAGG 
CTGTTGTGTG ACATGGAAGG TGATGAAGAG ACCAGGGAAG CTTATGCCAA TATCGCGGAA 
TTGGACCAGT ACGTCTTCCA GGACACCCAG CTGGAGGGCC TGAGCAAAGA CATTTTCATC 
GAGCACATAG GATTGGAAGA AATGATCAGC GAGAGCGTGG AATTGCTGGA GGAGGCAGGG 
CAGAAAAGTC AGAAGAGACC CTTCCCAGAG GAGCTGCCTG TGGATCTGAA GCACCGGAAG 
CTAGCCGAGC CCCTCACCAT GCCCGTGGTG ACTGGCACTT TCCTGGTGGG GCCAGTGAGC 
GACTCCTTGG TTCAGCCTTG CCCGCCACCT CCTGCTCTGT TCAACACGGA GCCAGCATCC 
AGCCAGACCC GGCTGAAGGA CGCAGCGCCT CCGTCCAGTT CCTTGTTGAG CTGCCTGAGT 
CTTCCCGCGG GACCCATTCA GATTATCCCC ACTCTCCCCA CTCTGCCCCA GGGGCTGTGG 
CCGATCTCAG GGACTGGGAC GGGGGTCTCC AGTATACTCA TCTACCAAAG TGAGATGCCC 
CCGGCCAGCC AAACACCCCC ATCCAGCGGG CCTGCTGTCC AGAGCCTTCC CAAGTCCCCA 
GACCGGCCTG GCTCTGCCAG CCCCTTTGCC CCGTCTGCCG CTGACCTCCC CAGCATGCCC 
GAACCGGCCC TCACCTCCCG TGCAGGCCTG ACAGAGGATG AGATGTCCCC CACCAAATGC 
CCAGCAGCTG GCGGGGCCTC CAGCAAACTT CCCAAGTGGC CTGAGAGCGT GGAGCAGTTC 
TACCAGTCGC TACGGGACAA GTACCAGGCC CAGCCCACCG GCCCGGAAGG CACCCTGGTG 
GACATGGACC TGGTGAGGGT GAGGCTGGAG AAGAGCAGCG GGAAGAGCCA GGAGAGAGAG 
CTGGCCACCC TGGACTGGGC AGAGCGGCAG CCGGCCCGAG GGGGTCTGGC CGAGGTGCTG 
CTGGCCGCCA GCGACCGCCA GCAGCCCCGG GAGACGCGGG TGATCGCTGT GCTGGGCAAA 
GCGGGACATG GGAAGAGTCA CTGGGCCCGG GCCGTGAGCC GGGCCTGGGC CCACGGCCAG 
CTGCCACAGT ACGACTTTGT CTTCTGTGTC CCCTGCCATC GTTTGGACCG TCCGGGGACC 
TCCTACCGCC TGCAGGATCT GCTGTCCTCC CTGGGCCCGC AGCCGTTGCC AGTGGACGAC 
GAGGTCCTCA GTTACATTGC GAGGAGACCC AACCGCATCC TGCTCATCCT GGATGGCTTC 
GAGGACCTGG AAGCCCACGA TGGCTCCCTG CACAGCACAG GAGGCCCCGG GTCGGCAGAG 
CCCCGCTCCC TCCGGGGGCT GCTGGCGGGC CTCCTCCAGC GCAAGCTGCT GCGGGGCTGC 
ACCCTGCTGC TCACGGCCTG GCCCCGGGGC CGCCTGGCCC AGAGCCTGAG CAAGGTGGAC 
GCCCTGTTTG AGGTGGCCGG CTTCTCGGCC CAGCAGGTTG AGACCTATGT GAGGCGTTAC 
TTTGAGTCGG AGGGGACCGC TGAGCACCAA GAGAGAGCCC TGGCGCTCCT GCAGGCCCGG 
CCGTTCCTCC TGAGCCACAG CCACAGCCCC ACCGTGTGCC GGACCGTGTG CCAGCTCGCA 
GAGGCCCTCC TGCAGCGGAG TGATGAAGCC CAGCTGCCCT CCACGCTCAC GGGCCTCTAC 
GTGGGCCTGC TAGGCCCAGC AGCTCGAGAT AGCCCCCCAG GGGCCCTGGC GGAACTGGCC 
AGGCTGGCCT GGGAGCTGGG CCGTGTGCAC CAGAGGGGCC TGAAGGCGGG CTGTTTACCG 
TCGGCGGAGG CGAGGGCCTG GGCTGTGGCC CAAGGCTGGT TGCGGCCCAC CCCGGGGGCC 
CCAGAGACGG AGCTGGCCTT CTCCAGCTTC CTCCTGCAGT GCTTCCTGGG GGCTGTGTGG 
CTGGCTCTGA GCGGCGAAAT CAAGGACAAG GAGCTGCCGC AGTATCTGGC CTTGACCCCG 
AGGAAGAAGC GGCCCTATGA CAACTGGCTG GAGGGCGTGC CGCGCTTCTT GGTCGGACTG 
GTCTTCCAGC CTCGCGCCGG CTGCCTGGGG GCCCTGGCAG GGCCGGCGGC CACCACGTCA 
GCGGACAGGA AGCAGAAGGT GCTCACGAGG TACCTGAAGC GTCTGCAGCC CGGGACGCTG 
CAGGCGGGGC GGCTGCTGGA GCTGCTGCAC TGTGCCCACG AGGCGCTGGA CCCCGGGCTC 
TGGCAGCACG TGCTGCAGGG GCTCCCTGCC CGCCTCTCCT TCCTGGGCAC ACGGCTCACG 
CCTCCTGACA CCCATGTGCT GGGCAGCGCC CTGGAGGCCG CGGGCCGAGA CTTTTCCCTG 
GACCTCCGCA GCACTGGCGT CGACGCCTCT GGACTGGGGA GCCTCGTGGG ACTCAGCTGT 
GTCACCCGTT TCAGGGCTGC ATTGAGTGAC ACTGTGGAGC TATGGGAGTC CCTGCAGCAG 
CGTGGGGAGG CCAAGCTACT CCGGGCAGTG GAGGAGAAGT TCACCATCGA GCCTTTCAAG 
GCCAAGTCCA TGAAGGATGT GGAAGACCTT GGCAATCTCG TGCAGATCCA GAGGACAAGA 
AGCTCCTCTG AAGCAGCAGC TGGGGAGCTC CCTGCTGTCC GAGACTTAAA GAAGCTGGAG 
TTTGCGCTGG GCCCTGTCTT GGGCCCACAG GTTTTTCCTA AACTGGTGAA GATCCTTGAG 
GCCTTTACTT CCCTTCAGCA TCTAGACCTG GACTCGCTGA GCGAGAACAA GATTGGGGAC 
GAGGGTGTCG CCCAGCTCTC AGCCACCTTC CCTCAGCTGA AGGCCCTGGA GACACTCAAC 
TTGTCCCAGA ACAACATCAC CGACGTGGGT GCCTGCAAGC TGGCCGAGGC TCTGCCCGCG 
CTGGCCACGT CCCTCCTCAG GTTGAGCTTG TACAATAACT GTATCTGCGA CGCGGGAGCC 
GAGAGCCTGG CGCACGCGCT TCCAGACATG GTGTCCCTCC GGGTGCTGGA CGTCCAGTAC 
AACAAGTTCA CAGCCGCTGG GGCTCAGCAG CTTGCCGCTG GCCTGAGAAA GTGCCCTCAG 
GTGAAGACAC TGGCGATGTG GACGCCCACC ATCCCCTTTG GCGTCCAGGA ACACCTGCAG 
CAGCTGGACC CACGAATCAT TCTGAGATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_010817559.1
CDS	207..3596
Translation	MRCLAPRPAGSYLPEPQGSGQCPTMELGPLEGSYLELLNSSADPLQLYHLYDRMDLTGEEEIELCSEPDTDTINCEQFSRLLCDMEGDEETREAYANIAELDQYVFQDTQLEGLSKDIFIEHIGLEEMISESVELLEEAGQKSQKRPFPEELPVDLKHRKLAEPLTMPVVTGTFLVGPVSDSLVQPCPPPPALFNTEPASSQTRLKDAAPPSSSLLSCLSLPAGPIQIIPTLPTLPQGLWPISGTGTGVSSILIYQSEMPPASQTPPSSGPAVQSLPKSPDRPGSASPFAPSAADLPSMPEPALTSRAGLTEDEMSPTKCPAAGGASSKLPKWPESVEQFYQSLRDKYQAQPTGPEGTLVDMDLVRVRLEKSSGKSQERELATLDWAERQPARGGLAEVLLAASDRQQPRETRVIAVLGKAGHGKSHWARAVSRAWAHGQLPQYDFVFCVPCHRLDRPGTSYRLQDLLSSLGPQPLPVDDEVLSYIARRPNRILLILDGFEDLEAHDGSLHSTGGPGSAEPRSLRGLLAGLLQRKLLRGCTLLLTAWPRGRLAQSLSKVDALFEVAGFSAQQVETYVRRYFESEGTAEHQERALALLQARPFLLSHSHSPTVCRTVCQLAEALLQRSDEAQLPSTLTGLYVGLLGPAARDSPPGALAELARLAWELGRVHQRGLKAGCLPSAEARAWAVAQGWLRPTPGAPETELAFSSFLLQCFLGAVWLALSGEIKDKELPQYLALTPRKKRPYDNWLEGVPRFLVGLVFQPRAGCLGALAGPAATTSADRKQKVLTRYLKRLQPGTLQAGRLLELLHCAHEALDPGLWQHVLQGLPARLSFLGTRLTPPDTHVLGSALEAAGRDFSLDLRSTGVDASGLGSLVGLSCVTRFRAALSDTVELWESLQQRGEAKLLRAVEEKFTIEPFKAKSMKDVEDLGNLVQIQRTRSSSEAAAGELPAVRDLKKLEFALGPVLGPQVFPKLVKILEAFTSLQHLDLDSLSENKIGDEGVAQLSATFPQLKALETLNLSQNNITDVGACKLAEALPALATSLLRLSLYNNCICDAGAESLAHALPDMVSLRVLDVQYNKFTAAGAQQLAAGLRKCPQVKTLAMWTPTIPFGVQEHLQQLDPRIILR

Target ORF information:

RefSeq Version	XM_010819257.2
Organism	Bos taurus(cattle)
Definition	Bos taurus class II, major histocompatibility complex, transactivator (CIITA), transcript variant X4, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_010819257.2

ORF Insert Sequence:

ATGCGTTGCC TGGCTCCACG CCCTGCCGGG TCCTACCTGC CAGAGCCCCA AGGCAGTGGA 
CAGTGCCCAA CCATGGAGCT GGGGCCTCTA GAAGGCAGTT ACTTAGAACT TCTCAACAGC 
AGTGCTGACC CTTTGCAGCT CTACCACCTC TACGACCGGA TGGATCTGAC AGGAGAAGAA 
GAAATAGAGC TCTGCTCAGA GCCTGACACA GACACCATCA ACTGCGAACA GTTCAGCAGG 
CTGTTGTGTG ACATGGAAGG TGATGAAGAG ACCAGGGAAG CTTATGCCAA TATCGCGGAA 
TTGGACCAGT ACGTCTTCCA GGACACCCAG CTGGAGGGCC TGAGCAAAGA CATTTTCATC 
GAGCACATAG GATTGGAAGA AATGATCAGC GAGAGCGTGG AATTGCTGGA GGAGGCAGGG 
CAGAAAAGTC AGAAGAGACC CTTCCCAGAG GAGCTGCCTG TGGATCTGAA GCACCGGAAG 
CTAGCCGAGC CCCTCACCAT GCCCGTGGTG ACTGGCACTT TCCTGGTGGG GCCAGTGAGC 
GACTCCTTGG TTCAGCCTTG CCCGCCACCT CCTGCTCTGT TCAACACGGA GCCAGCATCC 
AGCCAGACCC GGCTGAAGGA CGCAGCGCCT CCGTCCAGTT CCTTGTTGAG CTGCCTGAGT 
CTTCCCGCGG GACCCATTCA GATTATCCCC ACTCTCCCCA CTCTGCCCCA GGGGCTGTGG 
CCGATCTCAG GGACTGGGAC GGGGGTCTCC AGTATACTCA TCTACCAAAG TGAGATGCCC 
CCGGCCAGCC AAACACCCCC ATCCAGCGGG CCTGCTGTCC AGAGCCTTCC CAAGTCCCCA 
GACCGGCCTG GCTCTGCCAG CCCCTTTGCC CCGTCTGCCG CTGACCTCCC CAGCATGCCC 
GAACCGGCCC TCACCTCCCG TGCAGGCCTG ACAGAGGATG AGATGTCCCC CACCAAATGC 
CCAGCAGCTG GCGGGGCCTC CAGCAAACTT CCCAAGTGGC CTGAGAGCGT GGAGCAGTTC 
TACCAGTCGC TACGGGACAA GTACCAGGCC CAGCCCACCG GCCCGGAAGG CACCCTGGTG 
GACATGGACC TGGTGAGGGT GAGGCTGGAG AAGAGCAGCG GGAAGAGCCA GGAGAGAGAG 
CTGGCCACCC TGGACTGGGC AGAGCGGCAG CCGGCCCGAG GGGGTCTGGC CGAGGTGCTG 
CTGGCCGCCA GCGACCGCCA GCAGCCCCGG GAGACGCGGG TGATCGCTGT GCTGGGCAAA 
GCGGGACATG GGAAGAGTCA CTGGGCCCGG GCCGTGAGCC GGGCCTGGGC CCACGGCCAG 
CTGCCACAGT ACGACTTTGT CTTCTGTGTC CCCTGCCATC GTTTGGACCG TCCGGGGACC 
TCCTACCGCC TGCAGGATCT GCTGTCCTCC CTGGGCCCGC AGCCGTTGCC AGTGGACGAC 
GAGGTCCTCA GTTACATTGC GAGGAGACCC AACCGCATCC TGCTCATCCT GGATGGCTTC 
GAGGACCTGG AAGCCCACGA TGGCTCCCTG CACAGCACAG GAGGCCCCGG GTCGGCAGAG 
CCCCGCTCCC TCCGGGGGCT GCTGGCGGGC CTCCTCCAGC GCAAGCTGCT GCGGGGCTGC 
ACCCTGCTGC TCACGGCCTG GCCCCGGGGC CGCCTGGCCC AGAGCCTGAG CAAGGTGGAC 
GCCCTGTTTG AGGTGGCCGG CTTCTCGGCC CAGCAGGTTG AGACCTATGT GAGGCGTTAC 
TTTGAGTCGG AGGGGACCGC TGAGCACCAA GAGAGAGCCC TGGCGCTCCT GCAGGCCCGG 
CCGTTCCTCC TGAGCCACAG CCACAGCCCC ACCGTGTGCC GGACCGTGTG CCAGCTCGCA 
GAGGCCCTCC TGCAGCGGAG TGATGAAGCC CAGCTGCCCT CCACGCTCAC GGGCCTCTAC 
GTGGGCCTGC TAGGCCCAGC AGCTCGAGAT AGCCCCCCAG GGGCCCTGGC GGAACTGGCC 
AGGCTGGCCT GGGAGCTGGG CCGTGTGCAC CAGAGGGGCC TGAAGGCGGG CTGTTTACCG 
TCGGCGGAGG CGAGGGCCTG GGCTGTGGCC CAAGGCTGGT TGCGGCCCAC CCCGGGGGCC 
CCAGAGACGG AGCTGGCCTT CTCCAGCTTC CTCCTGCAGT GCTTCCTGGG GGCTGTGTGG 
CTGGCTCTGA GCGGCGAAAT CAAGGACAAG GAGCTGCCGC AGTATCTGGC CTTGACCCCG 
AGGAAGAAGC GGCCCTATGA CAACTGGCTG GAGGGCGTGC CGCGCTTCTT GGTCGGACTG 
GTCTTCCAGC CTCGCGCCGG CTGCCTGGGG GCCCTGGCAG GGCCGGCGGC CACCACGTCA 
GCGGACAGGA AGCAGAAGGT GCTCACGAGG TACCTGAAGC GTCTGCAGCC CGGGACGCTG 
CAGGCGGGGC GGCTGCTGGA GCTGCTGCAC TGTGCCCACG AGGCGCTGGA CCCCGGGCTC 
TGGCAGCACG TGCTGCAGGG GCTCCCTGCC CGCCTCTCCT TCCTGGGCAC ACGGCTCACG 
CCTCCTGACA CCCATGTGCT GGGCAGCGCC CTGGAGGCCG CGGGCCGAGA CTTTTCCCTG 
GACCTCCGCA GCACTGGCGT CGACGCCTCT GGACTGGGGA GCCTCGTGGG ACTCAGCTGT 
GTCACCCGTT TCAGGGCTGC ATTGAGTGAC ACTGTGGAGC TATGGGAGTC CCTGCAGCAG 
CGTGGGGAGG CCAAGCTACT CCGGGCAGTG GAGGAGAAGT TCACCATCGA GCCTTTCAAG 
GCCAAGTCCA TGAAGGATGT GGAAGACCTT GGCAATCTCG TGCAGATCCA GAGGACAAGA 
AGCTCCTCTG AAGCAGCAGC TGGGGAGCTC CCTGCTGTCC GAGACTTAAA GAAGCTGGAG 
TTTGCGCTGG GCCCTGTCTT GGGCCCACAG GTTTTTCCTA AACTGGTGAA GATCCTTGAG 
GCCTTTACTT CCCTTCAGCA TCTAGACCTG GACTCGCTGA GCGAGAACAA GATTGGGGAC 
GAGGGTGTCG CCCAGCTCTC AGCCACCTTC CCTCAGCTGA AGGCCCTGGA GACACTCAAC 
TTGTCCCAGA ACAACATCAC CGACGTGGGT GCCTGCAAGC TGGCCGAGGC TCTGCCCGCG 
CTGGCCACGT CCCTCCTCAG GTTGAGCTTG TACAATAACT GTATCTGCGA CGCGGGAGCC 
GAGAGCCTGG CGCACGCGCT TCCAGACATG GTGTCCCTCC GGGTGCTGGA CGTCCAGTAC 
AACAAGTTCA CAGCCGCTGG GGCTCAGCAG CTTGCCGCTG GCCTGAGAAA GTGCCCTCAG 
GTGAAGACAC TGGCGATGTG GACGCCCACC ATCCCCTTTG GCGTCCAGGA ACACCTGCAG 
CAGCTGGACC CACGAATCAT TCTGAGATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

CIITA ( XM_010819257.3 ) cDNA ORF clone, Bos taurus(cattle) -> XP_010817559.1 Bos taurus class II major histocompatibility complex transactivator (CIITA), transcript variant X3, mRNA.

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CloneID	OBa11814
Clone ID Related Accession (Same CDS sequence)	XM_010819257.2 , XM_010819257.3 , XM_005196914.3
Accession Version	XM_010819257.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3390bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2018-05-06
Organism	Bos taurus(cattle)
Product	MHC class II transactivator isoform X3
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037352.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 7, 2018 this sequence version replaced XM_010819257.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGCGTTGCC TGGCTCCACG CCCTGCCGGG TCCTACCTGC CAGAGCCCCA AGGCAGTGGA 
CAGTGCCCAA CCATGGAGCT GGGGCCTCTA GAAGGCAGTT ACTTAGAACT TCTCAACAGC 
AGTGCTGACC CTTTGCAGCT CTACCACCTC TACGACCGGA TGGATCTGAC AGGAGAAGAA 
GAAATAGAGC TCTGCTCAGA GCCTGACACA GACACCATCA ACTGCGAACA GTTCAGCAGG 
CTGTTGTGTG ACATGGAAGG TGATGAAGAG ACCAGGGAAG CTTATGCCAA TATCGCGGAA 
TTGGACCAGT ACGTCTTCCA GGACACCCAG CTGGAGGGCC TGAGCAAAGA CATTTTCATC 
GAGCACATAG GATTGGAAGA AATGATCAGC GAGAGCGTGG AATTGCTGGA GGAGGCAGGG 
CAGAAAAGTC AGAAGAGACC CTTCCCAGAG GAGCTGCCTG TGGATCTGAA GCACCGGAAG 
CTAGCCGAGC CCCTCACCAT GCCCGTGGTG ACTGGCACTT TCCTGGTGGG GCCAGTGAGC 
GACTCCTTGG TTCAGCCTTG CCCGCCACCT CCTGCTCTGT TCAACACGGA GCCAGCATCC 
AGCCAGACCC GGCTGAAGGA CGCAGCGCCT CCGTCCAGTT CCTTGTTGAG CTGCCTGAGT 
CTTCCCGCGG GACCCATTCA GATTATCCCC ACTCTCCCCA CTCTGCCCCA GGGGCTGTGG 
CCGATCTCAG GGACTGGGAC GGGGGTCTCC AGTATACTCA TCTACCAAAG TGAGATGCCC 
CCGGCCAGCC AAACACCCCC ATCCAGCGGG CCTGCTGTCC AGAGCCTTCC CAAGTCCCCA 
GACCGGCCTG GCTCTGCCAG CCCCTTTGCC CCGTCTGCCG CTGACCTCCC CAGCATGCCC 
GAACCGGCCC TCACCTCCCG TGCAGGCCTG ACAGAGGATG AGATGTCCCC CACCAAATGC 
CCAGCAGCTG GCGGGGCCTC CAGCAAACTT CCCAAGTGGC CTGAGAGCGT GGAGCAGTTC 
TACCAGTCGC TACGGGACAA GTACCAGGCC CAGCCCACCG GCCCGGAAGG CACCCTGGTG 
GACATGGACC TGGTGAGGGT GAGGCTGGAG AAGAGCAGCG GGAAGAGCCA GGAGAGAGAG 
CTGGCCACCC TGGACTGGGC AGAGCGGCAG CCGGCCCGAG GGGGTCTGGC CGAGGTGCTG 
CTGGCCGCCA GCGACCGCCA GCAGCCCCGG GAGACGCGGG TGATCGCTGT GCTGGGCAAA 
GCGGGACATG GGAAGAGTCA CTGGGCCCGG GCCGTGAGCC GGGCCTGGGC CCACGGCCAG 
CTGCCACAGT ACGACTTTGT CTTCTGTGTC CCCTGCCATC GTTTGGACCG TCCGGGGACC 
TCCTACCGCC TGCAGGATCT GCTGTCCTCC CTGGGCCCGC AGCCGTTGCC AGTGGACGAC 
GAGGTCCTCA GTTACATTGC GAGGAGACCC AACCGCATCC TGCTCATCCT GGATGGCTTC 
GAGGACCTGG AAGCCCACGA TGGCTCCCTG CACAGCACAG GAGGCCCCGG GTCGGCAGAG 
CCCCGCTCCC TCCGGGGGCT GCTGGCGGGC CTCCTCCAGC GCAAGCTGCT GCGGGGCTGC 
ACCCTGCTGC TCACGGCCTG GCCCCGGGGC CGCCTGGCCC AGAGCCTGAG CAAGGTGGAC 
GCCCTGTTTG AGGTGGCCGG CTTCTCGGCC CAGCAGGTTG AGACCTATGT GAGGCGTTAC 
TTTGAGTCGG AGGGGACCGC TGAGCACCAA GAGAGAGCCC TGGCGCTCCT GCAGGCCCGG 
CCGTTCCTCC TGAGCCACAG CCACAGCCCC ACCGTGTGCC GGACCGTGTG CCAGCTCGCA 
GAGGCCCTCC TGCAGCGGAG TGATGAAGCC CAGCTGCCCT CCACGCTCAC GGGCCTCTAC 
GTGGGCCTGC TAGGCCCAGC AGCTCGAGAT AGCCCCCCAG GGGCCCTGGC GGAACTGGCC 
AGGCTGGCCT GGGAGCTGGG CCGTGTGCAC CAGAGGGGCC TGAAGGCGGG CTGTTTACCG 
TCGGCGGAGG CGAGGGCCTG GGCTGTGGCC CAAGGCTGGT TGCGGCCCAC CCCGGGGGCC 
CCAGAGACGG AGCTGGCCTT CTCCAGCTTC CTCCTGCAGT GCTTCCTGGG GGCTGTGTGG 
CTGGCTCTGA GCGGCGAAAT CAAGGACAAG GAGCTGCCGC AGTATCTGGC CTTGACCCCG 
AGGAAGAAGC GGCCCTATGA CAACTGGCTG GAGGGCGTGC CGCGCTTCTT GGTCGGACTG 
GTCTTCCAGC CTCGCGCCGG CTGCCTGGGG GCCCTGGCAG GGCCGGCGGC CACCACGTCA 
GCGGACAGGA AGCAGAAGGT GCTCACGAGG TACCTGAAGC GTCTGCAGCC CGGGACGCTG 
CAGGCGGGGC GGCTGCTGGA GCTGCTGCAC TGTGCCCACG AGGCGCTGGA CCCCGGGCTC 
TGGCAGCACG TGCTGCAGGG GCTCCCTGCC CGCCTCTCCT TCCTGGGCAC ACGGCTCACG 
CCTCCTGACA CCCATGTGCT GGGCAGCGCC CTGGAGGCCG CGGGCCGAGA CTTTTCCCTG 
GACCTCCGCA GCACTGGCGT CGACGCCTCT GGACTGGGGA GCCTCGTGGG ACTCAGCTGT 
GTCACCCGTT TCAGGGCTGC ATTGAGTGAC ACTGTGGAGC TATGGGAGTC CCTGCAGCAG 
CGTGGGGAGG CCAAGCTACT CCGGGCAGTG GAGGAGAAGT TCACCATCGA GCCTTTCAAG 
GCCAAGTCCA TGAAGGATGT GGAAGACCTT GGCAATCTCG TGCAGATCCA GAGGACAAGA 
AGCTCCTCTG AAGCAGCAGC TGGGGAGCTC CCTGCTGTCC GAGACTTAAA GAAGCTGGAG 
TTTGCGCTGG GCCCTGTCTT GGGCCCACAG GTTTTTCCTA AACTGGTGAA GATCCTTGAG 
GCCTTTACTT CCCTTCAGCA TCTAGACCTG GACTCGCTGA GCGAGAACAA GATTGGGGAC 
GAGGGTGTCG CCCAGCTCTC AGCCACCTTC CCTCAGCTGA AGGCCCTGGA GACACTCAAC 
TTGTCCCAGA ACAACATCAC CGACGTGGGT GCCTGCAAGC TGGCCGAGGC TCTGCCCGCG 
CTGGCCACGT CCCTCCTCAG GTTGAGCTTG TACAATAACT GTATCTGCGA CGCGGGAGCC 
GAGAGCCTGG CGCACGCGCT TCCAGACATG GTGTCCCTCC GGGTGCTGGA CGTCCAGTAC 
AACAAGTTCA CAGCCGCTGG GGCTCAGCAG CTTGCCGCTG GCCTGAGAAA GTGCCCTCAG 
GTGAAGACAC TGGCGATGTG GACGCCCACC ATCCCCTTTG GCGTCCAGGA ACACCTGCAG 
CAGCTGGACC CACGAATCAT TCTGAGATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_010817559.1
CDS	189..3578
Translation	MRCLAPRPAGSYLPEPQGSGQCPTMELGPLEGSYLELLNSSADPLQLYHLYDRMDLTGEEEIELCSEPDTDTINCEQFSRLLCDMEGDEETREAYANIAELDQYVFQDTQLEGLSKDIFIEHIGLEEMISESVELLEEAGQKSQKRPFPEELPVDLKHRKLAEPLTMPVVTGTFLVGPVSDSLVQPCPPPPALFNTEPASSQTRLKDAAPPSSSLLSCLSLPAGPIQIIPTLPTLPQGLWPISGTGTGVSSILIYQSEMPPASQTPPSSGPAVQSLPKSPDRPGSASPFAPSAADLPSMPEPALTSRAGLTEDEMSPTKCPAAGGASSKLPKWPESVEQFYQSLRDKYQAQPTGPEGTLVDMDLVRVRLEKSSGKSQERELATLDWAERQPARGGLAEVLLAASDRQQPRETRVIAVLGKAGHGKSHWARAVSRAWAHGQLPQYDFVFCVPCHRLDRPGTSYRLQDLLSSLGPQPLPVDDEVLSYIARRPNRILLILDGFEDLEAHDGSLHSTGGPGSAEPRSLRGLLAGLLQRKLLRGCTLLLTAWPRGRLAQSLSKVDALFEVAGFSAQQVETYVRRYFESEGTAEHQERALALLQARPFLLSHSHSPTVCRTVCQLAEALLQRSDEAQLPSTLTGLYVGLLGPAARDSPPGALAELARLAWELGRVHQRGLKAGCLPSAEARAWAVAQGWLRPTPGAPETELAFSSFLLQCFLGAVWLALSGEIKDKELPQYLALTPRKKRPYDNWLEGVPRFLVGLVFQPRAGCLGALAGPAATTSADRKQKVLTRYLKRLQPGTLQAGRLLELLHCAHEALDPGLWQHVLQGLPARLSFLGTRLTPPDTHVLGSALEAAGRDFSLDLRSTGVDASGLGSLVGLSCVTRFRAALSDTVELWESLQQRGEAKLLRAVEEKFTIEPFKAKSMKDVEDLGNLVQIQRTRSSSEAAAGELPAVRDLKKLEFALGPVLGPQVFPKLVKILEAFTSLQHLDLDSLSENKIGDEGVAQLSATFPQLKALETLNLSQNNITDVGACKLAEALPALATSLLRLSLYNNCICDAGAESLAHALPDMVSLRVLDVQYNKFTAAGAQQLAAGLRKCPQVKTLAMWTPTIPFGVQEHLQQLDPRIILR

Target ORF information:

RefSeq Version	XM_010819257.3
Organism	Bos taurus(cattle)
Definition	Bos taurus class II major histocompatibility complex transactivator (CIITA), transcript variant X3, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_010819257.3

ORF Insert Sequence:

ATGCGTTGCC TGGCTCCACG CCCTGCCGGG TCCTACCTGC CAGAGCCCCA AGGCAGTGGA 
CAGTGCCCAA CCATGGAGCT GGGGCCTCTA GAAGGCAGTT ACTTAGAACT TCTCAACAGC 
AGTGCTGACC CTTTGCAGCT CTACCACCTC TACGACCGGA TGGATCTGAC AGGAGAAGAA 
GAAATAGAGC TCTGCTCAGA GCCTGACACA GACACCATCA ACTGCGAACA GTTCAGCAGG 
CTGTTGTGTG ACATGGAAGG TGATGAAGAG ACCAGGGAAG CTTATGCCAA TATCGCGGAA 
TTGGACCAGT ACGTCTTCCA GGACACCCAG CTGGAGGGCC TGAGCAAAGA CATTTTCATC 
GAGCACATAG GATTGGAAGA AATGATCAGC GAGAGCGTGG AATTGCTGGA GGAGGCAGGG 
CAGAAAAGTC AGAAGAGACC CTTCCCAGAG GAGCTGCCTG TGGATCTGAA GCACCGGAAG 
CTAGCCGAGC CCCTCACCAT GCCCGTGGTG ACTGGCACTT TCCTGGTGGG GCCAGTGAGC 
GACTCCTTGG TTCAGCCTTG CCCGCCACCT CCTGCTCTGT TCAACACGGA GCCAGCATCC 
AGCCAGACCC GGCTGAAGGA CGCAGCGCCT CCGTCCAGTT CCTTGTTGAG CTGCCTGAGT 
CTTCCCGCGG GACCCATTCA GATTATCCCC ACTCTCCCCA CTCTGCCCCA GGGGCTGTGG 
CCGATCTCAG GGACTGGGAC GGGGGTCTCC AGTATACTCA TCTACCAAAG TGAGATGCCC 
CCGGCCAGCC AAACACCCCC ATCCAGCGGG CCTGCTGTCC AGAGCCTTCC CAAGTCCCCA 
GACCGGCCTG GCTCTGCCAG CCCCTTTGCC CCGTCTGCCG CTGACCTCCC CAGCATGCCC 
GAACCGGCCC TCACCTCCCG TGCAGGCCTG ACAGAGGATG AGATGTCCCC CACCAAATGC 
CCAGCAGCTG GCGGGGCCTC CAGCAAACTT CCCAAGTGGC CTGAGAGCGT GGAGCAGTTC 
TACCAGTCGC TACGGGACAA GTACCAGGCC CAGCCCACCG GCCCGGAAGG CACCCTGGTG 
GACATGGACC TGGTGAGGGT GAGGCTGGAG AAGAGCAGCG GGAAGAGCCA GGAGAGAGAG 
CTGGCCACCC TGGACTGGGC AGAGCGGCAG CCGGCCCGAG GGGGTCTGGC CGAGGTGCTG 
CTGGCCGCCA GCGACCGCCA GCAGCCCCGG GAGACGCGGG TGATCGCTGT GCTGGGCAAA 
GCGGGACATG GGAAGAGTCA CTGGGCCCGG GCCGTGAGCC GGGCCTGGGC CCACGGCCAG 
CTGCCACAGT ACGACTTTGT CTTCTGTGTC CCCTGCCATC GTTTGGACCG TCCGGGGACC 
TCCTACCGCC TGCAGGATCT GCTGTCCTCC CTGGGCCCGC AGCCGTTGCC AGTGGACGAC 
GAGGTCCTCA GTTACATTGC GAGGAGACCC AACCGCATCC TGCTCATCCT GGATGGCTTC 
GAGGACCTGG AAGCCCACGA TGGCTCCCTG CACAGCACAG GAGGCCCCGG GTCGGCAGAG 
CCCCGCTCCC TCCGGGGGCT GCTGGCGGGC CTCCTCCAGC GCAAGCTGCT GCGGGGCTGC 
ACCCTGCTGC TCACGGCCTG GCCCCGGGGC CGCCTGGCCC AGAGCCTGAG CAAGGTGGAC 
GCCCTGTTTG AGGTGGCCGG CTTCTCGGCC CAGCAGGTTG AGACCTATGT GAGGCGTTAC 
TTTGAGTCGG AGGGGACCGC TGAGCACCAA GAGAGAGCCC TGGCGCTCCT GCAGGCCCGG 
CCGTTCCTCC TGAGCCACAG CCACAGCCCC ACCGTGTGCC GGACCGTGTG CCAGCTCGCA 
GAGGCCCTCC TGCAGCGGAG TGATGAAGCC CAGCTGCCCT CCACGCTCAC GGGCCTCTAC 
GTGGGCCTGC TAGGCCCAGC AGCTCGAGAT AGCCCCCCAG GGGCCCTGGC GGAACTGGCC 
AGGCTGGCCT GGGAGCTGGG CCGTGTGCAC CAGAGGGGCC TGAAGGCGGG CTGTTTACCG 
TCGGCGGAGG CGAGGGCCTG GGCTGTGGCC CAAGGCTGGT TGCGGCCCAC CCCGGGGGCC 
CCAGAGACGG AGCTGGCCTT CTCCAGCTTC CTCCTGCAGT GCTTCCTGGG GGCTGTGTGG 
CTGGCTCTGA GCGGCGAAAT CAAGGACAAG GAGCTGCCGC AGTATCTGGC CTTGACCCCG 
AGGAAGAAGC GGCCCTATGA CAACTGGCTG GAGGGCGTGC CGCGCTTCTT GGTCGGACTG 
GTCTTCCAGC CTCGCGCCGG CTGCCTGGGG GCCCTGGCAG GGCCGGCGGC CACCACGTCA 
GCGGACAGGA AGCAGAAGGT GCTCACGAGG TACCTGAAGC GTCTGCAGCC CGGGACGCTG 
CAGGCGGGGC GGCTGCTGGA GCTGCTGCAC TGTGCCCACG AGGCGCTGGA CCCCGGGCTC 
TGGCAGCACG TGCTGCAGGG GCTCCCTGCC CGCCTCTCCT TCCTGGGCAC ACGGCTCACG 
CCTCCTGACA CCCATGTGCT GGGCAGCGCC CTGGAGGCCG CGGGCCGAGA CTTTTCCCTG 
GACCTCCGCA GCACTGGCGT CGACGCCTCT GGACTGGGGA GCCTCGTGGG ACTCAGCTGT 
GTCACCCGTT TCAGGGCTGC ATTGAGTGAC ACTGTGGAGC TATGGGAGTC CCTGCAGCAG 
CGTGGGGAGG CCAAGCTACT CCGGGCAGTG GAGGAGAAGT TCACCATCGA GCCTTTCAAG 
GCCAAGTCCA TGAAGGATGT GGAAGACCTT GGCAATCTCG TGCAGATCCA GAGGACAAGA 
AGCTCCTCTG AAGCAGCAGC TGGGGAGCTC CCTGCTGTCC GAGACTTAAA GAAGCTGGAG 
TTTGCGCTGG GCCCTGTCTT GGGCCCACAG GTTTTTCCTA AACTGGTGAA GATCCTTGAG 
GCCTTTACTT CCCTTCAGCA TCTAGACCTG GACTCGCTGA GCGAGAACAA GATTGGGGAC 
GAGGGTGTCG CCCAGCTCTC AGCCACCTTC CCTCAGCTGA AGGCCCTGGA GACACTCAAC 
TTGTCCCAGA ACAACATCAC CGACGTGGGT GCCTGCAAGC TGGCCGAGGC TCTGCCCGCG 
CTGGCCACGT CCCTCCTCAG GTTGAGCTTG TACAATAACT GTATCTGCGA CGCGGGAGCC 
GAGAGCCTGG CGCACGCGCT TCCAGACATG GTGTCCCTCC GGGTGCTGGA CGTCCAGTAC 
AACAAGTTCA CAGCCGCTGG GGCTCAGCAG CTTGCCGCTG GCCTGAGAAA GTGCCCTCAG 
GTGAAGACAC TGGCGATGTG GACGCCCACC ATCCCCTTTG GCGTCCAGGA ACACCTGCAG 
CAGCTGGACC CACGAATCAT TCTGAGATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

CIITA ( XM_005196914.3 ) cDNA ORF clone, Bos taurus(cattle) -> XP_005196971.1 Bos taurus class II, major histocompatibility complex, transactivator (CIITA), transcript variant X4, mRNA.

Price & Availability↑

CloneID	OBa11814
Clone ID Related Accession (Same CDS sequence)	XM_010819257.2 , XM_010819257.3 , XM_005196914.3
Accession Version	XM_005196914.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3390bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-01-25
Organism	Bos taurus(cattle)
Product	MHC class II transactivator isoform X4
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_014646645.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jan 26, 2016 this sequence version replaced XM_005196914.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bos taurus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGCGTTGCC TGGCTCCACG CCCTGCCGGG TCCTACCTGC CAGAGCCCCA AGGCAGTGGA 
CAGTGCCCAA CCATGGAGCT GGGGCCTCTA GAAGGCAGTT ACTTAGAACT TCTCAACAGC 
AGTGCTGACC CTTTGCAGCT CTACCACCTC TACGACCGGA TGGATCTGAC AGGAGAAGAA 
GAAATAGAGC TCTGCTCAGA GCCTGACACA GACACCATCA ACTGCGAACA GTTCAGCAGG 
CTGTTGTGTG ACATGGAAGG TGATGAAGAG ACCAGGGAAG CTTATGCCAA TATCGCGGAA 
TTGGACCAGT ACGTCTTCCA GGACACCCAG CTGGAGGGCC TGAGCAAAGA CATTTTCATC 
GAGCACATAG GATTGGAAGA AATGATCAGC GAGAGCGTGG AATTGCTGGA GGAGGCAGGG 
CAGAAAAGTC AGAAGAGACC CTTCCCAGAG GAGCTGCCTG TGGATCTGAA GCACCGGAAG 
CTAGCCGAGC CCCTCACCAT GCCCGTGGTG ACTGGCACTT TCCTGGTGGG GCCAGTGAGC 
GACTCCTTGG TTCAGCCTTG CCCGCCACCT CCTGCTCTGT TCAACACGGA GCCAGCATCC 
AGCCAGACCC GGCTGAAGGA CGCAGCGCCT CCGTCCAGTT CCTTGTTGAG CTGCCTGAGT 
CTTCCCGCGG GACCCATTCA GATTATCCCC ACTCTCCCCA CTCTGCCCCA GGGGCTGTGG 
CCGATCTCAG GGACTGGGAC GGGGGTCTCC AGTATACTCA TCTACCAAAG TGAGATGCCC 
CCGGCCAGCC AAACACCCCC ATCCAGCGGG CCTGCTGTCC AGAGCCTTCC CAAGTCCCCA 
GACCGGCCTG GCTCTGCCAG CCCCTTTGCC CCGTCTGCCG CTGACCTCCC CAGCATGCCC 
GAACCGGCCC TCACCTCCCG TGCAGGCCTG ACAGAGGATG AGATGTCCCC CACCAAATGC 
CCAGCAGCTG GCGGGGCCTC CAGCAAACTT CCCAAGTGGC CTGAGAGCGT GGAGCAGTTC 
TACCAGTCGC TACGGGACAA GTACCAGGCC CAGCCCACCG GCCCGGAAGG CACCCTGGTG 
GACATGGACC TGGTGAGGGT GAGGCTGGAG AAGAGCAGCG GGAAGAGCCA GGAGAGAGAG 
CTGGCCACCC TGGACTGGGC AGAGCGGCAG CCGGCCCGAG GGGGTCTGGC CGAGGTGCTG 
CTGGCCGCCA GCGACCGCCA GCAGCCCCGG GAGACGCGGG TGATCGCTGT GCTGGGCAAA 
GCGGGACATG GGAAGAGTCA CTGGGCCCGG GCCGTGAGCC GGGCCTGGGC CCACGGCCAG 
CTGCCACAGT ACGACTTTGT CTTCTGTGTC CCCTGCCATC GTTTGGACCG TCCGGGGACC 
TCCTACCGCC TGCAGGATCT GCTGTCCTCC CTGGGCCCGC AGCCGTTGCC AGTGGACGAC 
GAGGTCCTCA GTTACATTGC GAGGAGACCC AACCGCATCC TGCTCATCCT GGATGGCTTC 
GAGGACCTGG AAGCCCACGA TGGCTCCCTG CACAGCACAG GAGGCCCCGG GTCGGCAGAG 
CCCCGCTCCC TCCGGGGGCT GCTGGCGGGC CTCCTCCAGC GCAAGCTGCT GCGGGGCTGC 
ACCCTGCTGC TCACGGCCTG GCCCCGGGGC CGCCTGGCCC AGAGCCTGAG CAAGGTGGAC 
GCCCTGTTTG AGGTGGCCGG CTTCTCGGCC CAGCAGGTTG AGACCTATGT GAGGCGTTAC 
TTTGAGTCGG AGGGGACCGC TGAGCACCAA GAGAGAGCCC TGGCGCTCCT GCAGGCCCGG 
CCGTTCCTCC TGAGCCACAG CCACAGCCCC ACCGTGTGCC GGACCGTGTG CCAGCTCGCA 
GAGGCCCTCC TGCAGCGGAG TGATGAAGCC CAGCTGCCCT CCACGCTCAC GGGCCTCTAC 
GTGGGCCTGC TAGGCCCAGC AGCTCGAGAT AGCCCCCCAG GGGCCCTGGC GGAACTGGCC 
AGGCTGGCCT GGGAGCTGGG CCGTGTGCAC CAGAGGGGCC TGAAGGCGGG CTGTTTACCG 
TCGGCGGAGG CGAGGGCCTG GGCTGTGGCC CAAGGCTGGT TGCGGCCCAC CCCGGGGGCC 
CCAGAGACGG AGCTGGCCTT CTCCAGCTTC CTCCTGCAGT GCTTCCTGGG GGCTGTGTGG 
CTGGCTCTGA GCGGCGAAAT CAAGGACAAG GAGCTGCCGC AGTATCTGGC CTTGACCCCG 
AGGAAGAAGC GGCCCTATGA CAACTGGCTG GAGGGCGTGC CGCGCTTCTT GGTCGGACTG 
GTCTTCCAGC CTCGCGCCGG CTGCCTGGGG GCCCTGGCAG GGCCGGCGGC CACCACGTCA 
GCGGACAGGA AGCAGAAGGT GCTCACGAGG TACCTGAAGC GTCTGCAGCC CGGGACGCTG 
CAGGCGGGGC GGCTGCTGGA GCTGCTGCAC TGTGCCCACG AGGCGCTGGA CCCCGGGCTC 
TGGCAGCACG TGCTGCAGGG GCTCCCTGCC CGCCTCTCCT TCCTGGGCAC ACGGCTCACG 
CCTCCTGACA CCCATGTGCT GGGCAGCGCC CTGGAGGCCG CGGGCCGAGA CTTTTCCCTG 
GACCTCCGCA GCACTGGCGT CGACGCCTCT GGACTGGGGA GCCTCGTGGG ACTCAGCTGT 
GTCACCCGTT TCAGGGCTGC ATTGAGTGAC ACTGTGGAGC TATGGGAGTC CCTGCAGCAG 
CGTGGGGAGG CCAAGCTACT CCGGGCAGTG GAGGAGAAGT TCACCATCGA GCCTTTCAAG 
GCCAAGTCCA TGAAGGATGT GGAAGACCTT GGCAATCTCG TGCAGATCCA GAGGACAAGA 
AGCTCCTCTG AAGCAGCAGC TGGGGAGCTC CCTGCTGTCC GAGACTTAAA GAAGCTGGAG 
TTTGCGCTGG GCCCTGTCTT GGGCCCACAG GTTTTTCCTA AACTGGTGAA GATCCTTGAG 
GCCTTTACTT CCCTTCAGCA TCTAGACCTG GACTCGCTGA GCGAGAACAA GATTGGGGAC 
GAGGGTGTCG CCCAGCTCTC AGCCACCTTC CCTCAGCTGA AGGCCCTGGA GACACTCAAC 
TTGTCCCAGA ACAACATCAC CGACGTGGGT GCCTGCAAGC TGGCCGAGGC TCTGCCCGCG 
CTGGCCACGT CCCTCCTCAG GTTGAGCTTG TACAATAACT GTATCTGCGA CGCGGGAGCC 
GAGAGCCTGG CGCACGCGCT TCCAGACATG GTGTCCCTCC GGGTGCTGGA CGTCCAGTAC 
AACAAGTTCA CAGCCGCTGG GGCTCAGCAG CTTGCCGCTG GCCTGAGAAA GTGCCCTCAG 
GTGAAGACAC TGGCGATGTG GACGCCCACC ATCCCCTTTG GCGTCCAGGA ACACCTGCAG 
CAGCTGGACC CACGAATCAT TCTGAGATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_005196971.1
CDS	207..3596
Translation	MRCLAPRPAGSYLPEPQGSGQCPTMELGPLEGSYLELLNSSADPLQLYHLYDRMDLTGEEEIELCSEPDTDTINCEQFSRLLCDMEGDEETREAYANIAELDQYVFQDTQLEGLSKDIFIEHIGLEEMISESVELLEEAGQKSQKRPFPEELPVDLKHRKLAEPLTMPVVTGTFLVGPVSDSLVQPCPPPPALFNTEPASSQTRLKDAAPPSSSLLSCLSLPAGPIQIIPTLPTLPQGLWPISGTGTGVSSILIYQSEMPPASQTPPSSGPAVQSLPKSPDRPGSASPFAPSAADLPSMPEPALTSRAGLTEDEMSPTKCPAAGGASSKLPKWPESVEQFYQSLRDKYQAQPTGPEGTLVDMDLVRVRLEKSSGKSQERELATLDWAERQPARGGLAEVLLAASDRQQPRETRVIAVLGKAGHGKSHWARAVSRAWAHGQLPQYDFVFCVPCHRLDRPGTSYRLQDLLSSLGPQPLPVDDEVLSYIARRPNRILLILDGFEDLEAHDGSLHSTGGPGSAEPRSLRGLLAGLLQRKLLRGCTLLLTAWPRGRLAQSLSKVDALFEVAGFSAQQVETYVRRYFESEGTAEHQERALALLQARPFLLSHSHSPTVCRTVCQLAEALLQRSDEAQLPSTLTGLYVGLLGPAARDSPPGALAELARLAWELGRVHQRGLKAGCLPSAEARAWAVAQGWLRPTPGAPETELAFSSFLLQCFLGAVWLALSGEIKDKELPQYLALTPRKKRPYDNWLEGVPRFLVGLVFQPRAGCLGALAGPAATTSADRKQKVLTRYLKRLQPGTLQAGRLLELLHCAHEALDPGLWQHVLQGLPARLSFLGTRLTPPDTHVLGSALEAAGRDFSLDLRSTGVDASGLGSLVGLSCVTRFRAALSDTVELWESLQQRGEAKLLRAVEEKFTIEPFKAKSMKDVEDLGNLVQIQRTRSSSEAAAGELPAVRDLKKLEFALGPVLGPQVFPKLVKILEAFTSLQHLDLDSLSENKIGDEGVAQLSATFPQLKALETLNLSQNNITDVGACKLAEALPALATSLLRLSLYNNCICDAGAESLAHALPDMVSLRVLDVQYNKFTAAGAQQLAAGLRKCPQVKTLAMWTPTIPFGVQEHLQQLDPRIILR

Target ORF information:

RefSeq Version	XM_005196914.3
Organism	Bos taurus(cattle)
Definition	Bos taurus class II, major histocompatibility complex, transactivator (CIITA), transcript variant X4, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_005196914.3

ORF Insert Sequence:

ATGCGTTGCC TGGCTCCACG CCCTGCCGGG TCCTACCTGC CAGAGCCCCA AGGCAGTGGA 
CAGTGCCCAA CCATGGAGCT GGGGCCTCTA GAAGGCAGTT ACTTAGAACT TCTCAACAGC 
AGTGCTGACC CTTTGCAGCT CTACCACCTC TACGACCGGA TGGATCTGAC AGGAGAAGAA 
GAAATAGAGC TCTGCTCAGA GCCTGACACA GACACCATCA ACTGCGAACA GTTCAGCAGG 
CTGTTGTGTG ACATGGAAGG TGATGAAGAG ACCAGGGAAG CTTATGCCAA TATCGCGGAA 
TTGGACCAGT ACGTCTTCCA GGACACCCAG CTGGAGGGCC TGAGCAAAGA CATTTTCATC 
GAGCACATAG GATTGGAAGA AATGATCAGC GAGAGCGTGG AATTGCTGGA GGAGGCAGGG 
CAGAAAAGTC AGAAGAGACC CTTCCCAGAG GAGCTGCCTG TGGATCTGAA GCACCGGAAG 
CTAGCCGAGC CCCTCACCAT GCCCGTGGTG ACTGGCACTT TCCTGGTGGG GCCAGTGAGC 
GACTCCTTGG TTCAGCCTTG CCCGCCACCT CCTGCTCTGT TCAACACGGA GCCAGCATCC 
AGCCAGACCC GGCTGAAGGA CGCAGCGCCT CCGTCCAGTT CCTTGTTGAG CTGCCTGAGT 
CTTCCCGCGG GACCCATTCA GATTATCCCC ACTCTCCCCA CTCTGCCCCA GGGGCTGTGG 
CCGATCTCAG GGACTGGGAC GGGGGTCTCC AGTATACTCA TCTACCAAAG TGAGATGCCC 
CCGGCCAGCC AAACACCCCC ATCCAGCGGG CCTGCTGTCC AGAGCCTTCC CAAGTCCCCA 
GACCGGCCTG GCTCTGCCAG CCCCTTTGCC CCGTCTGCCG CTGACCTCCC CAGCATGCCC 
GAACCGGCCC TCACCTCCCG TGCAGGCCTG ACAGAGGATG AGATGTCCCC CACCAAATGC 
CCAGCAGCTG GCGGGGCCTC CAGCAAACTT CCCAAGTGGC CTGAGAGCGT GGAGCAGTTC 
TACCAGTCGC TACGGGACAA GTACCAGGCC CAGCCCACCG GCCCGGAAGG CACCCTGGTG 
GACATGGACC TGGTGAGGGT GAGGCTGGAG AAGAGCAGCG GGAAGAGCCA GGAGAGAGAG 
CTGGCCACCC TGGACTGGGC AGAGCGGCAG CCGGCCCGAG GGGGTCTGGC CGAGGTGCTG 
CTGGCCGCCA GCGACCGCCA GCAGCCCCGG GAGACGCGGG TGATCGCTGT GCTGGGCAAA 
GCGGGACATG GGAAGAGTCA CTGGGCCCGG GCCGTGAGCC GGGCCTGGGC CCACGGCCAG 
CTGCCACAGT ACGACTTTGT CTTCTGTGTC CCCTGCCATC GTTTGGACCG TCCGGGGACC 
TCCTACCGCC TGCAGGATCT GCTGTCCTCC CTGGGCCCGC AGCCGTTGCC AGTGGACGAC 
GAGGTCCTCA GTTACATTGC GAGGAGACCC AACCGCATCC TGCTCATCCT GGATGGCTTC 
GAGGACCTGG AAGCCCACGA TGGCTCCCTG CACAGCACAG GAGGCCCCGG GTCGGCAGAG 
CCCCGCTCCC TCCGGGGGCT GCTGGCGGGC CTCCTCCAGC GCAAGCTGCT GCGGGGCTGC 
ACCCTGCTGC TCACGGCCTG GCCCCGGGGC CGCCTGGCCC AGAGCCTGAG CAAGGTGGAC 
GCCCTGTTTG AGGTGGCCGG CTTCTCGGCC CAGCAGGTTG AGACCTATGT GAGGCGTTAC 
TTTGAGTCGG AGGGGACCGC TGAGCACCAA GAGAGAGCCC TGGCGCTCCT GCAGGCCCGG 
CCGTTCCTCC TGAGCCACAG CCACAGCCCC ACCGTGTGCC GGACCGTGTG CCAGCTCGCA 
GAGGCCCTCC TGCAGCGGAG TGATGAAGCC CAGCTGCCCT CCACGCTCAC GGGCCTCTAC 
GTGGGCCTGC TAGGCCCAGC AGCTCGAGAT AGCCCCCCAG GGGCCCTGGC GGAACTGGCC 
AGGCTGGCCT GGGAGCTGGG CCGTGTGCAC CAGAGGGGCC TGAAGGCGGG CTGTTTACCG 
TCGGCGGAGG CGAGGGCCTG GGCTGTGGCC CAAGGCTGGT TGCGGCCCAC CCCGGGGGCC 
CCAGAGACGG AGCTGGCCTT CTCCAGCTTC CTCCTGCAGT GCTTCCTGGG GGCTGTGTGG 
CTGGCTCTGA GCGGCGAAAT CAAGGACAAG GAGCTGCCGC AGTATCTGGC CTTGACCCCG 
AGGAAGAAGC GGCCCTATGA CAACTGGCTG GAGGGCGTGC CGCGCTTCTT GGTCGGACTG 
GTCTTCCAGC CTCGCGCCGG CTGCCTGGGG GCCCTGGCAG GGCCGGCGGC CACCACGTCA 
GCGGACAGGA AGCAGAAGGT GCTCACGAGG TACCTGAAGC GTCTGCAGCC CGGGACGCTG 
CAGGCGGGGC GGCTGCTGGA GCTGCTGCAC TGTGCCCACG AGGCGCTGGA CCCCGGGCTC 
TGGCAGCACG TGCTGCAGGG GCTCCCTGCC CGCCTCTCCT TCCTGGGCAC ACGGCTCACG 
CCTCCTGACA CCCATGTGCT GGGCAGCGCC CTGGAGGCCG CGGGCCGAGA CTTTTCCCTG 
GACCTCCGCA GCACTGGCGT CGACGCCTCT GGACTGGGGA GCCTCGTGGG ACTCAGCTGT 
GTCACCCGTT TCAGGGCTGC ATTGAGTGAC ACTGTGGAGC TATGGGAGTC CCTGCAGCAG 
CGTGGGGAGG CCAAGCTACT CCGGGCAGTG GAGGAGAAGT TCACCATCGA GCCTTTCAAG 
GCCAAGTCCA TGAAGGATGT GGAAGACCTT GGCAATCTCG TGCAGATCCA GAGGACAAGA 
AGCTCCTCTG AAGCAGCAGC TGGGGAGCTC CCTGCTGTCC GAGACTTAAA GAAGCTGGAG 
TTTGCGCTGG GCCCTGTCTT GGGCCCACAG GTTTTTCCTA AACTGGTGAA GATCCTTGAG 
GCCTTTACTT CCCTTCAGCA TCTAGACCTG GACTCGCTGA GCGAGAACAA GATTGGGGAC 
GAGGGTGTCG CCCAGCTCTC AGCCACCTTC CCTCAGCTGA AGGCCCTGGA GACACTCAAC 
TTGTCCCAGA ACAACATCAC CGACGTGGGT GCCTGCAAGC TGGCCGAGGC TCTGCCCGCG 
CTGGCCACGT CCCTCCTCAG GTTGAGCTTG TACAATAACT GTATCTGCGA CGCGGGAGCC 
GAGAGCCTGG CGCACGCGCT TCCAGACATG GTGTCCCTCC GGGTGCTGGA CGTCCAGTAC 
AACAAGTTCA CAGCCGCTGG GGCTCAGCAG CTTGCCGCTG GCCTGAGAAA GTGCCCTCAG 
GTGAAGACAC TGGCGATGTG GACGCCCACC ATCCCCTTTG GCGTCCAGGA ACACCTGCAG 
CAGCTGGACC CACGAATCAT TCTGAGATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

CIITA ( XM_585540.8 ) cDNA ORF clone, Bos taurus(cattle) -> XP_585540.5 Bos taurus class II, major histocompatibility complex, transactivator (CIITA), transcript variant X5, mRNA.

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CloneID	OBa11815
Clone ID Related Accession (Same CDS sequence)	XM_585540.8 , XM_010819258.2 , XM_010819258.3
Accession Version	XM_585540.8 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3345bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-01-25
Organism	Bos taurus(cattle)
Product	MHC class II transactivator isoform X5
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_014646645.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jan 26, 2016 this sequence version replaced XM_585540.7. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bos taurus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGCAGGCA GTGGACAGTG CCCAACCATG GAGCTGGGGC CTCTAGAAGG CAGTTACTTA 
GAACTTCTCA ACAGCAGTGC TGACCCTTTG CAGCTCTACC ACCTCTACGA CCGGATGGAT 
CTGACAGGAG AAGAAGAAAT AGAGCTCTGC TCAGAGCCTG ACACAGACAC CATCAACTGC 
GAACAGTTCA GCAGGCTGTT GTGTGACATG GAAGGTGATG AAGAGACCAG GGAAGCTTAT 
GCCAATATCG CGGAATTGGA CCAGTACGTC TTCCAGGACA CCCAGCTGGA GGGCCTGAGC 
AAAGACATTT TCATCGAGCA CATAGGATTG GAAGAAATGA TCAGCGAGAG CGTGGAATTG 
CTGGAGGAGG CAGGGCAGAA AAGTCAGAAG AGACCCTTCC CAGAGGAGCT GCCTGTGGAT 
CTGAAGCACC GGAAGCTAGC CGAGCCCCTC ACCATGCCCG TGGTGACTGG CACTTTCCTG 
GTGGGGCCAG TGAGCGACTC CTTGGTTCAG CCTTGCCCGC CACCTCCTGC TCTGTTCAAC 
ACGGAGCCAG CATCCAGCCA GACCCGGCTG AAGGACGCAG CGCCTCCGTC CAGTTCCTTG 
TTGAGCTGCC TGAGTCTTCC CGCGGGACCC ATTCAGATTA TCCCCACTCT CCCCACTCTG 
CCCCAGGGGC TGTGGCCGAT CTCAGGGACT GGGACGGGGG TCTCCAGTAT ACTCATCTAC 
CAAAGTGAGA TGCCCCCGGC CAGCCAAACA CCCCCATCCA GCGGGCCTGC TGTCCAGAGC 
CTTCCCAAGT CCCCAGACCG GCCTGGCTCT GCCAGCCCCT TTGCCCCGTC TGCCGCTGAC 
CTCCCCAGCA TGCCCGAACC GGCCCTCACC TCCCGTGCAG GCCTGACAGA GGATGAGATG 
TCCCCCACCA AATGCCCAGC AGCTGGCGGG GCCTCCAGCA AACTTCCCAA GTGGCCTGAG 
AGCGTGGAGC AGTTCTACCA GTCGCTACGG GACAAGTACC AGGCCCAGCC CACCGGCCCG 
GAAGGCACCC TGGTGGACAT GGACCTGGTG AGGGTGAGGC TGGAGAAGAG CAGCGGGAAG 
AGCCAGGAGA GAGAGCTGGC CACCCTGGAC TGGGCAGAGC GGCAGCCGGC CCGAGGGGGT 
CTGGCCGAGG TGCTGCTGGC CGCCAGCGAC CGCCAGCAGC CCCGGGAGAC GCGGGTGATC 
GCTGTGCTGG GCAAAGCGGG ACATGGGAAG AGTCACTGGG CCCGGGCCGT GAGCCGGGCC 
TGGGCCCACG GCCAGCTGCC ACAGTACGAC TTTGTCTTCT GTGTCCCCTG CCATCGTTTG 
GACCGTCCGG GGACCTCCTA CCGCCTGCAG GATCTGCTGT CCTCCCTGGG CCCGCAGCCG 
TTGCCAGTGG ACGACGAGGT CCTCAGTTAC ATTGCGAGGA GACCCAACCG CATCCTGCTC 
ATCCTGGATG GCTTCGAGGA CCTGGAAGCC CACGATGGCT CCCTGCACAG CACAGGAGGC 
CCCGGGTCGG CAGAGCCCCG CTCCCTCCGG GGGCTGCTGG CGGGCCTCCT CCAGCGCAAG 
CTGCTGCGGG GCTGCACCCT GCTGCTCACG GCCTGGCCCC GGGGCCGCCT GGCCCAGAGC 
CTGAGCAAGG TGGACGCCCT GTTTGAGGTG GCCGGCTTCT CGGCCCAGCA GGTTGAGACC 
TATGTGAGGC GTTACTTTGA GTCGGAGGGG ACCGCTGAGC ACCAAGAGAG AGCCCTGGCG 
CTCCTGCAGG CCCGGCCGTT CCTCCTGAGC CACAGCCACA GCCCCACCGT GTGCCGGACC 
GTGTGCCAGC TCGCAGAGGC CCTCCTGCAG CGGAGTGATG AAGCCCAGCT GCCCTCCACG 
CTCACGGGCC TCTACGTGGG CCTGCTAGGC CCAGCAGCTC GAGATAGCCC CCCAGGGGCC 
CTGGCGGAAC TGGCCAGGCT GGCCTGGGAG CTGGGCCGTG TGCACCAGAG GGGCCTGAAG 
GCGGGCTGTT TACCGTCGGC GGAGGCGAGG GCCTGGGCTG TGGCCCAAGG CTGGTTGCGG 
CCCACCCCGG GGGCCCCAGA GACGGAGCTG GCCTTCTCCA GCTTCCTCCT GCAGTGCTTC 
CTGGGGGCTG TGTGGCTGGC TCTGAGCGGC GAAATCAAGG ACAAGGAGCT GCCGCAGTAT 
CTGGCCTTGA CCCCGAGGAA GAAGCGGCCC TATGACAACT GGCTGGAGGG CGTGCCGCGC 
TTCTTGGTCG GACTGGTCTT CCAGCCTCGC GCCGGCTGCC TGGGGGCCCT GGCAGGGCCG 
GCGGCCACCA CGTCAGCGGA CAGGAAGCAG AAGGTGCTCA CGAGGTACCT GAAGCGTCTG 
CAGCCCGGGA CGCTGCAGGC GGGGCGGCTG CTGGAGCTGC TGCACTGTGC CCACGAGGCG 
CTGGACCCCG GGCTCTGGCA GCACGTGCTG CAGGGGCTCC CTGCCCGCCT CTCCTTCCTG 
GGCACACGGC TCACGCCTCC TGACACCCAT GTGCTGGGCA GCGCCCTGGA GGCCGCGGGC 
CGAGACTTTT CCCTGGACCT CCGCAGCACT GGCGTCGACG CCTCTGGACT GGGGAGCCTC 
GTGGGACTCA GCTGTGTCAC CCGTTTCAGG GCTGCATTGA GTGACACTGT GGAGCTATGG 
GAGTCCCTGC AGCAGCGTGG GGAGGCCAAG CTACTCCGGG CAGTGGAGGA GAAGTTCACC 
ATCGAGCCTT TCAAGGCCAA GTCCATGAAG GATGTGGAAG ACCTTGGCAA TCTCGTGCAG 
ATCCAGAGGA CAAGAAGCTC CTCTGAAGCA GCAGCTGGGG AGCTCCCTGC TGTCCGAGAC 
TTAAAGAAGC TGGAGTTTGC GCTGGGCCCT GTCTTGGGCC CACAGGTTTT TCCTAAACTG 
GTGAAGATCC TTGAGGCCTT TACTTCCCTT CAGCATCTAG ACCTGGACTC GCTGAGCGAG 
AACAAGATTG GGGACGAGGG TGTCGCCCAG CTCTCAGCCA CCTTCCCTCA GCTGAAGGCC 
CTGGAGACAC TCAACTTGTC CCAGAACAAC ATCACCGACG TGGGTGCCTG CAAGCTGGCC 
GAGGCTCTGC CCGCGCTGGC CACGTCCCTC CTCAGGTTGA GCTTGTACAA TAACTGTATC 
TGCGACGCGG GAGCCGAGAG CCTGGCGCAC GCGCTTCCAG ACATGGTGTC CCTCCGGGTG 
CTGGACGTCC AGTACAACAA GTTCACAGCC GCTGGGGCTC AGCAGCTTGC CGCTGGCCTG 
AGAAAGTGCC CTCAGGTGAA GACACTGGCG ATGTGGACGC CCACCATCCC CTTTGGCGTC 
CAGGAACACC TGCAGCAGCT GGACCCACGA ATCATTCTGA GATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_585540.5
CDS	116..3460
Translation	MAGSGQCPTMELGPLEGSYLELLNSSADPLQLYHLYDRMDLTGEEEIELCSEPDTDTINCEQFSRLLCDMEGDEETREAYANIAELDQYVFQDTQLEGLSKDIFIEHIGLEEMISESVELLEEAGQKSQKRPFPEELPVDLKHRKLAEPLTMPVVTGTFLVGPVSDSLVQPCPPPPALFNTEPASSQTRLKDAAPPSSSLLSCLSLPAGPIQIIPTLPTLPQGLWPISGTGTGVSSILIYQSEMPPASQTPPSSGPAVQSLPKSPDRPGSASPFAPSAADLPSMPEPALTSRAGLTEDEMSPTKCPAAGGASSKLPKWPESVEQFYQSLRDKYQAQPTGPEGTLVDMDLVRVRLEKSSGKSQERELATLDWAERQPARGGLAEVLLAASDRQQPRETRVIAVLGKAGHGKSHWARAVSRAWAHGQLPQYDFVFCVPCHRLDRPGTSYRLQDLLSSLGPQPLPVDDEVLSYIARRPNRILLILDGFEDLEAHDGSLHSTGGPGSAEPRSLRGLLAGLLQRKLLRGCTLLLTAWPRGRLAQSLSKVDALFEVAGFSAQQVETYVRRYFESEGTAEHQERALALLQARPFLLSHSHSPTVCRTVCQLAEALLQRSDEAQLPSTLTGLYVGLLGPAARDSPPGALAELARLAWELGRVHQRGLKAGCLPSAEARAWAVAQGWLRPTPGAPETELAFSSFLLQCFLGAVWLALSGEIKDKELPQYLALTPRKKRPYDNWLEGVPRFLVGLVFQPRAGCLGALAGPAATTSADRKQKVLTRYLKRLQPGTLQAGRLLELLHCAHEALDPGLWQHVLQGLPARLSFLGTRLTPPDTHVLGSALEAAGRDFSLDLRSTGVDASGLGSLVGLSCVTRFRAALSDTVELWESLQQRGEAKLLRAVEEKFTIEPFKAKSMKDVEDLGNLVQIQRTRSSSEAAAGELPAVRDLKKLEFALGPVLGPQVFPKLVKILEAFTSLQHLDLDSLSENKIGDEGVAQLSATFPQLKALETLNLSQNNITDVGACKLAEALPALATSLLRLSLYNNCICDAGAESLAHALPDMVSLRVLDVQYNKFTAAGAQQLAAGLRKCPQVKTLAMWTPTIPFGVQEHLQQLDPRIILR

Target ORF information:

RefSeq Version	XM_585540.8
Organism	Bos taurus(cattle)
Definition	Bos taurus class II, major histocompatibility complex, transactivator (CIITA), transcript variant X5, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_585540.8

ORF Insert Sequence:

ATGGCAGGCA GTGGACAGTG CCCAACCATG GAGCTGGGGC CTCTAGAAGG CAGTTACTTA 
GAACTTCTCA ACAGCAGTGC TGACCCTTTG CAGCTCTACC ACCTCTACGA CCGGATGGAT 
CTGACAGGAG AAGAAGAAAT AGAGCTCTGC TCAGAGCCTG ACACAGACAC CATCAACTGC 
GAACAGTTCA GCAGGCTGTT GTGTGACATG GAAGGTGATG AAGAGACCAG GGAAGCTTAT 
GCCAATATCG CGGAATTGGA CCAGTACGTC TTCCAGGACA CCCAGCTGGA GGGCCTGAGC 
AAAGACATTT TCATCGAGCA CATAGGATTG GAAGAAATGA TCAGCGAGAG CGTGGAATTG 
CTGGAGGAGG CAGGGCAGAA AAGTCAGAAG AGACCCTTCC CAGAGGAGCT GCCTGTGGAT 
CTGAAGCACC GGAAGCTAGC CGAGCCCCTC ACCATGCCCG TGGTGACTGG CACTTTCCTG 
GTGGGGCCAG TGAGCGACTC CTTGGTTCAG CCTTGCCCGC CACCTCCTGC TCTGTTCAAC 
ACGGAGCCAG CATCCAGCCA GACCCGGCTG AAGGACGCAG CGCCTCCGTC CAGTTCCTTG 
TTGAGCTGCC TGAGTCTTCC CGCGGGACCC ATTCAGATTA TCCCCACTCT CCCCACTCTG 
CCCCAGGGGC TGTGGCCGAT CTCAGGGACT GGGACGGGGG TCTCCAGTAT ACTCATCTAC 
CAAAGTGAGA TGCCCCCGGC CAGCCAAACA CCCCCATCCA GCGGGCCTGC TGTCCAGAGC 
CTTCCCAAGT CCCCAGACCG GCCTGGCTCT GCCAGCCCCT TTGCCCCGTC TGCCGCTGAC 
CTCCCCAGCA TGCCCGAACC GGCCCTCACC TCCCGTGCAG GCCTGACAGA GGATGAGATG 
TCCCCCACCA AATGCCCAGC AGCTGGCGGG GCCTCCAGCA AACTTCCCAA GTGGCCTGAG 
AGCGTGGAGC AGTTCTACCA GTCGCTACGG GACAAGTACC AGGCCCAGCC CACCGGCCCG 
GAAGGCACCC TGGTGGACAT GGACCTGGTG AGGGTGAGGC TGGAGAAGAG CAGCGGGAAG 
AGCCAGGAGA GAGAGCTGGC CACCCTGGAC TGGGCAGAGC GGCAGCCGGC CCGAGGGGGT 
CTGGCCGAGG TGCTGCTGGC CGCCAGCGAC CGCCAGCAGC CCCGGGAGAC GCGGGTGATC 
GCTGTGCTGG GCAAAGCGGG ACATGGGAAG AGTCACTGGG CCCGGGCCGT GAGCCGGGCC 
TGGGCCCACG GCCAGCTGCC ACAGTACGAC TTTGTCTTCT GTGTCCCCTG CCATCGTTTG 
GACCGTCCGG GGACCTCCTA CCGCCTGCAG GATCTGCTGT CCTCCCTGGG CCCGCAGCCG 
TTGCCAGTGG ACGACGAGGT CCTCAGTTAC ATTGCGAGGA GACCCAACCG CATCCTGCTC 
ATCCTGGATG GCTTCGAGGA CCTGGAAGCC CACGATGGCT CCCTGCACAG CACAGGAGGC 
CCCGGGTCGG CAGAGCCCCG CTCCCTCCGG GGGCTGCTGG CGGGCCTCCT CCAGCGCAAG 
CTGCTGCGGG GCTGCACCCT GCTGCTCACG GCCTGGCCCC GGGGCCGCCT GGCCCAGAGC 
CTGAGCAAGG TGGACGCCCT GTTTGAGGTG GCCGGCTTCT CGGCCCAGCA GGTTGAGACC 
TATGTGAGGC GTTACTTTGA GTCGGAGGGG ACCGCTGAGC ACCAAGAGAG AGCCCTGGCG 
CTCCTGCAGG CCCGGCCGTT CCTCCTGAGC CACAGCCACA GCCCCACCGT GTGCCGGACC 
GTGTGCCAGC TCGCAGAGGC CCTCCTGCAG CGGAGTGATG AAGCCCAGCT GCCCTCCACG 
CTCACGGGCC TCTACGTGGG CCTGCTAGGC CCAGCAGCTC GAGATAGCCC CCCAGGGGCC 
CTGGCGGAAC TGGCCAGGCT GGCCTGGGAG CTGGGCCGTG TGCACCAGAG GGGCCTGAAG 
GCGGGCTGTT TACCGTCGGC GGAGGCGAGG GCCTGGGCTG TGGCCCAAGG CTGGTTGCGG 
CCCACCCCGG GGGCCCCAGA GACGGAGCTG GCCTTCTCCA GCTTCCTCCT GCAGTGCTTC 
CTGGGGGCTG TGTGGCTGGC TCTGAGCGGC GAAATCAAGG ACAAGGAGCT GCCGCAGTAT 
CTGGCCTTGA CCCCGAGGAA GAAGCGGCCC TATGACAACT GGCTGGAGGG CGTGCCGCGC 
TTCTTGGTCG GACTGGTCTT CCAGCCTCGC GCCGGCTGCC TGGGGGCCCT GGCAGGGCCG 
GCGGCCACCA CGTCAGCGGA CAGGAAGCAG AAGGTGCTCA CGAGGTACCT GAAGCGTCTG 
CAGCCCGGGA CGCTGCAGGC GGGGCGGCTG CTGGAGCTGC TGCACTGTGC CCACGAGGCG 
CTGGACCCCG GGCTCTGGCA GCACGTGCTG CAGGGGCTCC CTGCCCGCCT CTCCTTCCTG 
GGCACACGGC TCACGCCTCC TGACACCCAT GTGCTGGGCA GCGCCCTGGA GGCCGCGGGC 
CGAGACTTTT CCCTGGACCT CCGCAGCACT GGCGTCGACG CCTCTGGACT GGGGAGCCTC 
GTGGGACTCA GCTGTGTCAC CCGTTTCAGG GCTGCATTGA GTGACACTGT GGAGCTATGG 
GAGTCCCTGC AGCAGCGTGG GGAGGCCAAG CTACTCCGGG CAGTGGAGGA GAAGTTCACC 
ATCGAGCCTT TCAAGGCCAA GTCCATGAAG GATGTGGAAG ACCTTGGCAA TCTCGTGCAG 
ATCCAGAGGA CAAGAAGCTC CTCTGAAGCA GCAGCTGGGG AGCTCCCTGC TGTCCGAGAC 
TTAAAGAAGC TGGAGTTTGC GCTGGGCCCT GTCTTGGGCC CACAGGTTTT TCCTAAACTG 
GTGAAGATCC TTGAGGCCTT TACTTCCCTT CAGCATCTAG ACCTGGACTC GCTGAGCGAG 
AACAAGATTG GGGACGAGGG TGTCGCCCAG CTCTCAGCCA CCTTCCCTCA GCTGAAGGCC 
CTGGAGACAC TCAACTTGTC CCAGAACAAC ATCACCGACG TGGGTGCCTG CAAGCTGGCC 
GAGGCTCTGC CCGCGCTGGC CACGTCCCTC CTCAGGTTGA GCTTGTACAA TAACTGTATC 
TGCGACGCGG GAGCCGAGAG CCTGGCGCAC GCGCTTCCAG ACATGGTGTC CCTCCGGGTG 
CTGGACGTCC AGTACAACAA GTTCACAGCC GCTGGGGCTC AGCAGCTTGC CGCTGGCCTG 
AGAAAGTGCC CTCAGGTGAA GACACTGGCG ATGTGGACGC CCACCATCCC CTTTGGCGTC 
CAGGAACACC TGCAGCAGCT GGACCCACGA ATCATTCTGA GATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

CIITA ( XM_010819258.2 ) cDNA ORF clone, Bos taurus(cattle) -> XP_010817560.1 Bos taurus class II, major histocompatibility complex, transactivator (CIITA), transcript variant X5, mRNA.

Price & Availability↑

CloneID	OBa11815
Clone ID Related Accession (Same CDS sequence)	XM_585540.8 , XM_010819258.2 , XM_010819258.3
Accession Version	XM_010819258.2	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3345bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-01-25
Organism	Bos taurus(cattle)
Product	MHC class II transactivator isoform X5
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003104571.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jan 26, 2016 this sequence version replaced XM_010819258.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bos taurus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGCAGGCA GTGGACAGTG CCCAACCATG GAGCTGGGGC CTCTAGAAGG CAGTTACTTA 
GAACTTCTCA ACAGCAGTGC TGACCCTTTG CAGCTCTACC ACCTCTACGA CCGGATGGAT 
CTGACAGGAG AAGAAGAAAT AGAGCTCTGC TCAGAGCCTG ACACAGACAC CATCAACTGC 
GAACAGTTCA GCAGGCTGTT GTGTGACATG GAAGGTGATG AAGAGACCAG GGAAGCTTAT 
GCCAATATCG CGGAATTGGA CCAGTACGTC TTCCAGGACA CCCAGCTGGA GGGCCTGAGC 
AAAGACATTT TCATCGAGCA CATAGGATTG GAAGAAATGA TCAGCGAGAG CGTGGAATTG 
CTGGAGGAGG CAGGGCAGAA AAGTCAGAAG AGACCCTTCC CAGAGGAGCT GCCTGTGGAT 
CTGAAGCACC GGAAGCTAGC CGAGCCCCTC ACCATGCCCG TGGTGACTGG CACTTTCCTG 
GTGGGGCCAG TGAGCGACTC CTTGGTTCAG CCTTGCCCGC CACCTCCTGC TCTGTTCAAC 
ACGGAGCCAG CATCCAGCCA GACCCGGCTG AAGGACGCAG CGCCTCCGTC CAGTTCCTTG 
TTGAGCTGCC TGAGTCTTCC CGCGGGACCC ATTCAGATTA TCCCCACTCT CCCCACTCTG 
CCCCAGGGGC TGTGGCCGAT CTCAGGGACT GGGACGGGGG TCTCCAGTAT ACTCATCTAC 
CAAAGTGAGA TGCCCCCGGC CAGCCAAACA CCCCCATCCA GCGGGCCTGC TGTCCAGAGC 
CTTCCCAAGT CCCCAGACCG GCCTGGCTCT GCCAGCCCCT TTGCCCCGTC TGCCGCTGAC 
CTCCCCAGCA TGCCCGAACC GGCCCTCACC TCCCGTGCAG GCCTGACAGA GGATGAGATG 
TCCCCCACCA AATGCCCAGC AGCTGGCGGG GCCTCCAGCA AACTTCCCAA GTGGCCTGAG 
AGCGTGGAGC AGTTCTACCA GTCGCTACGG GACAAGTACC AGGCCCAGCC CACCGGCCCG 
GAAGGCACCC TGGTGGACAT GGACCTGGTG AGGGTGAGGC TGGAGAAGAG CAGCGGGAAG 
AGCCAGGAGA GAGAGCTGGC CACCCTGGAC TGGGCAGAGC GGCAGCCGGC CCGAGGGGGT 
CTGGCCGAGG TGCTGCTGGC CGCCAGCGAC CGCCAGCAGC CCCGGGAGAC GCGGGTGATC 
GCTGTGCTGG GCAAAGCGGG ACATGGGAAG AGTCACTGGG CCCGGGCCGT GAGCCGGGCC 
TGGGCCCACG GCCAGCTGCC ACAGTACGAC TTTGTCTTCT GTGTCCCCTG CCATCGTTTG 
GACCGTCCGG GGACCTCCTA CCGCCTGCAG GATCTGCTGT CCTCCCTGGG CCCGCAGCCG 
TTGCCAGTGG ACGACGAGGT CCTCAGTTAC ATTGCGAGGA GACCCAACCG CATCCTGCTC 
ATCCTGGATG GCTTCGAGGA CCTGGAAGCC CACGATGGCT CCCTGCACAG CACAGGAGGC 
CCCGGGTCGG CAGAGCCCCG CTCCCTCCGG GGGCTGCTGG CGGGCCTCCT CCAGCGCAAG 
CTGCTGCGGG GCTGCACCCT GCTGCTCACG GCCTGGCCCC GGGGCCGCCT GGCCCAGAGC 
CTGAGCAAGG TGGACGCCCT GTTTGAGGTG GCCGGCTTCT CGGCCCAGCA GGTTGAGACC 
TATGTGAGGC GTTACTTTGA GTCGGAGGGG ACCGCTGAGC ACCAAGAGAG AGCCCTGGCG 
CTCCTGCAGG CCCGGCCGTT CCTCCTGAGC CACAGCCACA GCCCCACCGT GTGCCGGACC 
GTGTGCCAGC TCGCAGAGGC CCTCCTGCAG CGGAGTGATG AAGCCCAGCT GCCCTCCACG 
CTCACGGGCC TCTACGTGGG CCTGCTAGGC CCAGCAGCTC GAGATAGCCC CCCAGGGGCC 
CTGGCGGAAC TGGCCAGGCT GGCCTGGGAG CTGGGCCGTG TGCACCAGAG GGGCCTGAAG 
GCGGGCTGTT TACCGTCGGC GGAGGCGAGG GCCTGGGCTG TGGCCCAAGG CTGGTTGCGG 
CCCACCCCGG GGGCCCCAGA GACGGAGCTG GCCTTCTCCA GCTTCCTCCT GCAGTGCTTC 
CTGGGGGCTG TGTGGCTGGC TCTGAGCGGC GAAATCAAGG ACAAGGAGCT GCCGCAGTAT 
CTGGCCTTGA CCCCGAGGAA GAAGCGGCCC TATGACAACT GGCTGGAGGG CGTGCCGCGC 
TTCTTGGTCG GACTGGTCTT CCAGCCTCGC GCCGGCTGCC TGGGGGCCCT GGCAGGGCCG 
GCGGCCACCA CGTCAGCGGA CAGGAAGCAG AAGGTGCTCA CGAGGTACCT GAAGCGTCTG 
CAGCCCGGGA CGCTGCAGGC GGGGCGGCTG CTGGAGCTGC TGCACTGTGC CCACGAGGCG 
CTGGACCCCG GGCTCTGGCA GCACGTGCTG CAGGGGCTCC CTGCCCGCCT CTCCTTCCTG 
GGCACACGGC TCACGCCTCC TGACACCCAT GTGCTGGGCA GCGCCCTGGA GGCCGCGGGC 
CGAGACTTTT CCCTGGACCT CCGCAGCACT GGCGTCGACG CCTCTGGACT GGGGAGCCTC 
GTGGGACTCA GCTGTGTCAC CCGTTTCAGG GCTGCATTGA GTGACACTGT GGAGCTATGG 
GAGTCCCTGC AGCAGCGTGG GGAGGCCAAG CTACTCCGGG CAGTGGAGGA GAAGTTCACC 
ATCGAGCCTT TCAAGGCCAA GTCCATGAAG GATGTGGAAG ACCTTGGCAA TCTCGTGCAG 
ATCCAGAGGA CAAGAAGCTC CTCTGAAGCA GCAGCTGGGG AGCTCCCTGC TGTCCGAGAC 
TTAAAGAAGC TGGAGTTTGC GCTGGGCCCT GTCTTGGGCC CACAGGTTTT TCCTAAACTG 
GTGAAGATCC TTGAGGCCTT TACTTCCCTT CAGCATCTAG ACCTGGACTC GCTGAGCGAG 
AACAAGATTG GGGACGAGGG TGTCGCCCAG CTCTCAGCCA CCTTCCCTCA GCTGAAGGCC 
CTGGAGACAC TCAACTTGTC CCAGAACAAC ATCACCGACG TGGGTGCCTG CAAGCTGGCC 
GAGGCTCTGC CCGCGCTGGC CACGTCCCTC CTCAGGTTGA GCTTGTACAA TAACTGTATC 
TGCGACGCGG GAGCCGAGAG CCTGGCGCAC GCGCTTCCAG ACATGGTGTC CCTCCGGGTG 
CTGGACGTCC AGTACAACAA GTTCACAGCC GCTGGGGCTC AGCAGCTTGC CGCTGGCCTG 
AGAAAGTGCC CTCAGGTGAA GACACTGGCG ATGTGGACGC CCACCATCCC CTTTGGCGTC 
CAGGAACACC TGCAGCAGCT GGACCCACGA ATCATTCTGA GATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_010817560.1
CDS	116..3460
Translation	MAGSGQCPTMELGPLEGSYLELLNSSADPLQLYHLYDRMDLTGEEEIELCSEPDTDTINCEQFSRLLCDMEGDEETREAYANIAELDQYVFQDTQLEGLSKDIFIEHIGLEEMISESVELLEEAGQKSQKRPFPEELPVDLKHRKLAEPLTMPVVTGTFLVGPVSDSLVQPCPPPPALFNTEPASSQTRLKDAAPPSSSLLSCLSLPAGPIQIIPTLPTLPQGLWPISGTGTGVSSILIYQSEMPPASQTPPSSGPAVQSLPKSPDRPGSASPFAPSAADLPSMPEPALTSRAGLTEDEMSPTKCPAAGGASSKLPKWPESVEQFYQSLRDKYQAQPTGPEGTLVDMDLVRVRLEKSSGKSQERELATLDWAERQPARGGLAEVLLAASDRQQPRETRVIAVLGKAGHGKSHWARAVSRAWAHGQLPQYDFVFCVPCHRLDRPGTSYRLQDLLSSLGPQPLPVDDEVLSYIARRPNRILLILDGFEDLEAHDGSLHSTGGPGSAEPRSLRGLLAGLLQRKLLRGCTLLLTAWPRGRLAQSLSKVDALFEVAGFSAQQVETYVRRYFESEGTAEHQERALALLQARPFLLSHSHSPTVCRTVCQLAEALLQRSDEAQLPSTLTGLYVGLLGPAARDSPPGALAELARLAWELGRVHQRGLKAGCLPSAEARAWAVAQGWLRPTPGAPETELAFSSFLLQCFLGAVWLALSGEIKDKELPQYLALTPRKKRPYDNWLEGVPRFLVGLVFQPRAGCLGALAGPAATTSADRKQKVLTRYLKRLQPGTLQAGRLLELLHCAHEALDPGLWQHVLQGLPARLSFLGTRLTPPDTHVLGSALEAAGRDFSLDLRSTGVDASGLGSLVGLSCVTRFRAALSDTVELWESLQQRGEAKLLRAVEEKFTIEPFKAKSMKDVEDLGNLVQIQRTRSSSEAAAGELPAVRDLKKLEFALGPVLGPQVFPKLVKILEAFTSLQHLDLDSLSENKIGDEGVAQLSATFPQLKALETLNLSQNNITDVGACKLAEALPALATSLLRLSLYNNCICDAGAESLAHALPDMVSLRVLDVQYNKFTAAGAQQLAAGLRKCPQVKTLAMWTPTIPFGVQEHLQQLDPRIILR

Target ORF information:

RefSeq Version	XM_010819258.2
Organism	Bos taurus(cattle)
Definition	Bos taurus class II, major histocompatibility complex, transactivator (CIITA), transcript variant X5, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_010819258.2

ORF Insert Sequence:

ATGGCAGGCA GTGGACAGTG CCCAACCATG GAGCTGGGGC CTCTAGAAGG CAGTTACTTA 
GAACTTCTCA ACAGCAGTGC TGACCCTTTG CAGCTCTACC ACCTCTACGA CCGGATGGAT 
CTGACAGGAG AAGAAGAAAT AGAGCTCTGC TCAGAGCCTG ACACAGACAC CATCAACTGC 
GAACAGTTCA GCAGGCTGTT GTGTGACATG GAAGGTGATG AAGAGACCAG GGAAGCTTAT 
GCCAATATCG CGGAATTGGA CCAGTACGTC TTCCAGGACA CCCAGCTGGA GGGCCTGAGC 
AAAGACATTT TCATCGAGCA CATAGGATTG GAAGAAATGA TCAGCGAGAG CGTGGAATTG 
CTGGAGGAGG CAGGGCAGAA AAGTCAGAAG AGACCCTTCC CAGAGGAGCT GCCTGTGGAT 
CTGAAGCACC GGAAGCTAGC CGAGCCCCTC ACCATGCCCG TGGTGACTGG CACTTTCCTG 
GTGGGGCCAG TGAGCGACTC CTTGGTTCAG CCTTGCCCGC CACCTCCTGC TCTGTTCAAC 
ACGGAGCCAG CATCCAGCCA GACCCGGCTG AAGGACGCAG CGCCTCCGTC CAGTTCCTTG 
TTGAGCTGCC TGAGTCTTCC CGCGGGACCC ATTCAGATTA TCCCCACTCT CCCCACTCTG 
CCCCAGGGGC TGTGGCCGAT CTCAGGGACT GGGACGGGGG TCTCCAGTAT ACTCATCTAC 
CAAAGTGAGA TGCCCCCGGC CAGCCAAACA CCCCCATCCA GCGGGCCTGC TGTCCAGAGC 
CTTCCCAAGT CCCCAGACCG GCCTGGCTCT GCCAGCCCCT TTGCCCCGTC TGCCGCTGAC 
CTCCCCAGCA TGCCCGAACC GGCCCTCACC TCCCGTGCAG GCCTGACAGA GGATGAGATG 
TCCCCCACCA AATGCCCAGC AGCTGGCGGG GCCTCCAGCA AACTTCCCAA GTGGCCTGAG 
AGCGTGGAGC AGTTCTACCA GTCGCTACGG GACAAGTACC AGGCCCAGCC CACCGGCCCG 
GAAGGCACCC TGGTGGACAT GGACCTGGTG AGGGTGAGGC TGGAGAAGAG CAGCGGGAAG 
AGCCAGGAGA GAGAGCTGGC CACCCTGGAC TGGGCAGAGC GGCAGCCGGC CCGAGGGGGT 
CTGGCCGAGG TGCTGCTGGC CGCCAGCGAC CGCCAGCAGC CCCGGGAGAC GCGGGTGATC 
GCTGTGCTGG GCAAAGCGGG ACATGGGAAG AGTCACTGGG CCCGGGCCGT GAGCCGGGCC 
TGGGCCCACG GCCAGCTGCC ACAGTACGAC TTTGTCTTCT GTGTCCCCTG CCATCGTTTG 
GACCGTCCGG GGACCTCCTA CCGCCTGCAG GATCTGCTGT CCTCCCTGGG CCCGCAGCCG 
TTGCCAGTGG ACGACGAGGT CCTCAGTTAC ATTGCGAGGA GACCCAACCG CATCCTGCTC 
ATCCTGGATG GCTTCGAGGA CCTGGAAGCC CACGATGGCT CCCTGCACAG CACAGGAGGC 
CCCGGGTCGG CAGAGCCCCG CTCCCTCCGG GGGCTGCTGG CGGGCCTCCT CCAGCGCAAG 
CTGCTGCGGG GCTGCACCCT GCTGCTCACG GCCTGGCCCC GGGGCCGCCT GGCCCAGAGC 
CTGAGCAAGG TGGACGCCCT GTTTGAGGTG GCCGGCTTCT CGGCCCAGCA GGTTGAGACC 
TATGTGAGGC GTTACTTTGA GTCGGAGGGG ACCGCTGAGC ACCAAGAGAG AGCCCTGGCG 
CTCCTGCAGG CCCGGCCGTT CCTCCTGAGC CACAGCCACA GCCCCACCGT GTGCCGGACC 
GTGTGCCAGC TCGCAGAGGC CCTCCTGCAG CGGAGTGATG AAGCCCAGCT GCCCTCCACG 
CTCACGGGCC TCTACGTGGG CCTGCTAGGC CCAGCAGCTC GAGATAGCCC CCCAGGGGCC 
CTGGCGGAAC TGGCCAGGCT GGCCTGGGAG CTGGGCCGTG TGCACCAGAG GGGCCTGAAG 
GCGGGCTGTT TACCGTCGGC GGAGGCGAGG GCCTGGGCTG TGGCCCAAGG CTGGTTGCGG 
CCCACCCCGG GGGCCCCAGA GACGGAGCTG GCCTTCTCCA GCTTCCTCCT GCAGTGCTTC 
CTGGGGGCTG TGTGGCTGGC TCTGAGCGGC GAAATCAAGG ACAAGGAGCT GCCGCAGTAT 
CTGGCCTTGA CCCCGAGGAA GAAGCGGCCC TATGACAACT GGCTGGAGGG CGTGCCGCGC 
TTCTTGGTCG GACTGGTCTT CCAGCCTCGC GCCGGCTGCC TGGGGGCCCT GGCAGGGCCG 
GCGGCCACCA CGTCAGCGGA CAGGAAGCAG AAGGTGCTCA CGAGGTACCT GAAGCGTCTG 
CAGCCCGGGA CGCTGCAGGC GGGGCGGCTG CTGGAGCTGC TGCACTGTGC CCACGAGGCG 
CTGGACCCCG GGCTCTGGCA GCACGTGCTG CAGGGGCTCC CTGCCCGCCT CTCCTTCCTG 
GGCACACGGC TCACGCCTCC TGACACCCAT GTGCTGGGCA GCGCCCTGGA GGCCGCGGGC 
CGAGACTTTT CCCTGGACCT CCGCAGCACT GGCGTCGACG CCTCTGGACT GGGGAGCCTC 
GTGGGACTCA GCTGTGTCAC CCGTTTCAGG GCTGCATTGA GTGACACTGT GGAGCTATGG 
GAGTCCCTGC AGCAGCGTGG GGAGGCCAAG CTACTCCGGG CAGTGGAGGA GAAGTTCACC 
ATCGAGCCTT TCAAGGCCAA GTCCATGAAG GATGTGGAAG ACCTTGGCAA TCTCGTGCAG 
ATCCAGAGGA CAAGAAGCTC CTCTGAAGCA GCAGCTGGGG AGCTCCCTGC TGTCCGAGAC 
TTAAAGAAGC TGGAGTTTGC GCTGGGCCCT GTCTTGGGCC CACAGGTTTT TCCTAAACTG 
GTGAAGATCC TTGAGGCCTT TACTTCCCTT CAGCATCTAG ACCTGGACTC GCTGAGCGAG 
AACAAGATTG GGGACGAGGG TGTCGCCCAG CTCTCAGCCA CCTTCCCTCA GCTGAAGGCC 
CTGGAGACAC TCAACTTGTC CCAGAACAAC ATCACCGACG TGGGTGCCTG CAAGCTGGCC 
GAGGCTCTGC CCGCGCTGGC CACGTCCCTC CTCAGGTTGA GCTTGTACAA TAACTGTATC 
TGCGACGCGG GAGCCGAGAG CCTGGCGCAC GCGCTTCCAG ACATGGTGTC CCTCCGGGTG 
CTGGACGTCC AGTACAACAA GTTCACAGCC GCTGGGGCTC AGCAGCTTGC CGCTGGCCTG 
AGAAAGTGCC CTCAGGTGAA GACACTGGCG ATGTGGACGC CCACCATCCC CTTTGGCGTC 
CAGGAACACC TGCAGCAGCT GGACCCACGA ATCATTCTGA GATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

CIITA ( XM_010819258.3 ) cDNA ORF clone, Bos taurus(cattle) -> XP_010817560.1 Bos taurus class II major histocompatibility complex transactivator (CIITA), transcript variant X4, mRNA.

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CloneID	OBa11815
Clone ID Related Accession (Same CDS sequence)	XM_585540.8 , XM_010819258.2 , XM_010819258.3
Accession Version	XM_010819258.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3345bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2018-05-06
Organism	Bos taurus(cattle)
Product	MHC class II transactivator isoform X4
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037352.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 7, 2018 this sequence version replaced XM_010819258.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGCAGGCA GTGGACAGTG CCCAACCATG GAGCTGGGGC CTCTAGAAGG CAGTTACTTA 
GAACTTCTCA ACAGCAGTGC TGACCCTTTG CAGCTCTACC ACCTCTACGA CCGGATGGAT 
CTGACAGGAG AAGAAGAAAT AGAGCTCTGC TCAGAGCCTG ACACAGACAC CATCAACTGC 
GAACAGTTCA GCAGGCTGTT GTGTGACATG GAAGGTGATG AAGAGACCAG GGAAGCTTAT 
GCCAATATCG CGGAATTGGA CCAGTACGTC TTCCAGGACA CCCAGCTGGA GGGCCTGAGC 
AAAGACATTT TCATCGAGCA CATAGGATTG GAAGAAATGA TCAGCGAGAG CGTGGAATTG 
CTGGAGGAGG CAGGGCAGAA AAGTCAGAAG AGACCCTTCC CAGAGGAGCT GCCTGTGGAT 
CTGAAGCACC GGAAGCTAGC CGAGCCCCTC ACCATGCCCG TGGTGACTGG CACTTTCCTG 
GTGGGGCCAG TGAGCGACTC CTTGGTTCAG CCTTGCCCGC CACCTCCTGC TCTGTTCAAC 
ACGGAGCCAG CATCCAGCCA GACCCGGCTG AAGGACGCAG CGCCTCCGTC CAGTTCCTTG 
TTGAGCTGCC TGAGTCTTCC CGCGGGACCC ATTCAGATTA TCCCCACTCT CCCCACTCTG 
CCCCAGGGGC TGTGGCCGAT CTCAGGGACT GGGACGGGGG TCTCCAGTAT ACTCATCTAC 
CAAAGTGAGA TGCCCCCGGC CAGCCAAACA CCCCCATCCA GCGGGCCTGC TGTCCAGAGC 
CTTCCCAAGT CCCCAGACCG GCCTGGCTCT GCCAGCCCCT TTGCCCCGTC TGCCGCTGAC 
CTCCCCAGCA TGCCCGAACC GGCCCTCACC TCCCGTGCAG GCCTGACAGA GGATGAGATG 
TCCCCCACCA AATGCCCAGC AGCTGGCGGG GCCTCCAGCA AACTTCCCAA GTGGCCTGAG 
AGCGTGGAGC AGTTCTACCA GTCGCTACGG GACAAGTACC AGGCCCAGCC CACCGGCCCG 
GAAGGCACCC TGGTGGACAT GGACCTGGTG AGGGTGAGGC TGGAGAAGAG CAGCGGGAAG 
AGCCAGGAGA GAGAGCTGGC CACCCTGGAC TGGGCAGAGC GGCAGCCGGC CCGAGGGGGT 
CTGGCCGAGG TGCTGCTGGC CGCCAGCGAC CGCCAGCAGC CCCGGGAGAC GCGGGTGATC 
GCTGTGCTGG GCAAAGCGGG ACATGGGAAG AGTCACTGGG CCCGGGCCGT GAGCCGGGCC 
TGGGCCCACG GCCAGCTGCC ACAGTACGAC TTTGTCTTCT GTGTCCCCTG CCATCGTTTG 
GACCGTCCGG GGACCTCCTA CCGCCTGCAG GATCTGCTGT CCTCCCTGGG CCCGCAGCCG 
TTGCCAGTGG ACGACGAGGT CCTCAGTTAC ATTGCGAGGA GACCCAACCG CATCCTGCTC 
ATCCTGGATG GCTTCGAGGA CCTGGAAGCC CACGATGGCT CCCTGCACAG CACAGGAGGC 
CCCGGGTCGG CAGAGCCCCG CTCCCTCCGG GGGCTGCTGG CGGGCCTCCT CCAGCGCAAG 
CTGCTGCGGG GCTGCACCCT GCTGCTCACG GCCTGGCCCC GGGGCCGCCT GGCCCAGAGC 
CTGAGCAAGG TGGACGCCCT GTTTGAGGTG GCCGGCTTCT CGGCCCAGCA GGTTGAGACC 
TATGTGAGGC GTTACTTTGA GTCGGAGGGG ACCGCTGAGC ACCAAGAGAG AGCCCTGGCG 
CTCCTGCAGG CCCGGCCGTT CCTCCTGAGC CACAGCCACA GCCCCACCGT GTGCCGGACC 
GTGTGCCAGC TCGCAGAGGC CCTCCTGCAG CGGAGTGATG AAGCCCAGCT GCCCTCCACG 
CTCACGGGCC TCTACGTGGG CCTGCTAGGC CCAGCAGCTC GAGATAGCCC CCCAGGGGCC 
CTGGCGGAAC TGGCCAGGCT GGCCTGGGAG CTGGGCCGTG TGCACCAGAG GGGCCTGAAG 
GCGGGCTGTT TACCGTCGGC GGAGGCGAGG GCCTGGGCTG TGGCCCAAGG CTGGTTGCGG 
CCCACCCCGG GGGCCCCAGA GACGGAGCTG GCCTTCTCCA GCTTCCTCCT GCAGTGCTTC 
CTGGGGGCTG TGTGGCTGGC TCTGAGCGGC GAAATCAAGG ACAAGGAGCT GCCGCAGTAT 
CTGGCCTTGA CCCCGAGGAA GAAGCGGCCC TATGACAACT GGCTGGAGGG CGTGCCGCGC 
TTCTTGGTCG GACTGGTCTT CCAGCCTCGC GCCGGCTGCC TGGGGGCCCT GGCAGGGCCG 
GCGGCCACCA CGTCAGCGGA CAGGAAGCAG AAGGTGCTCA CGAGGTACCT GAAGCGTCTG 
CAGCCCGGGA CGCTGCAGGC GGGGCGGCTG CTGGAGCTGC TGCACTGTGC CCACGAGGCG 
CTGGACCCCG GGCTCTGGCA GCACGTGCTG CAGGGGCTCC CTGCCCGCCT CTCCTTCCTG 
GGCACACGGC TCACGCCTCC TGACACCCAT GTGCTGGGCA GCGCCCTGGA GGCCGCGGGC 
CGAGACTTTT CCCTGGACCT CCGCAGCACT GGCGTCGACG CCTCTGGACT GGGGAGCCTC 
GTGGGACTCA GCTGTGTCAC CCGTTTCAGG GCTGCATTGA GTGACACTGT GGAGCTATGG 
GAGTCCCTGC AGCAGCGTGG GGAGGCCAAG CTACTCCGGG CAGTGGAGGA GAAGTTCACC 
ATCGAGCCTT TCAAGGCCAA GTCCATGAAG GATGTGGAAG ACCTTGGCAA TCTCGTGCAG 
ATCCAGAGGA CAAGAAGCTC CTCTGAAGCA GCAGCTGGGG AGCTCCCTGC TGTCCGAGAC 
TTAAAGAAGC TGGAGTTTGC GCTGGGCCCT GTCTTGGGCC CACAGGTTTT TCCTAAACTG 
GTGAAGATCC TTGAGGCCTT TACTTCCCTT CAGCATCTAG ACCTGGACTC GCTGAGCGAG 
AACAAGATTG GGGACGAGGG TGTCGCCCAG CTCTCAGCCA CCTTCCCTCA GCTGAAGGCC 
CTGGAGACAC TCAACTTGTC CCAGAACAAC ATCACCGACG TGGGTGCCTG CAAGCTGGCC 
GAGGCTCTGC CCGCGCTGGC CACGTCCCTC CTCAGGTTGA GCTTGTACAA TAACTGTATC 
TGCGACGCGG GAGCCGAGAG CCTGGCGCAC GCGCTTCCAG ACATGGTGTC CCTCCGGGTG 
CTGGACGTCC AGTACAACAA GTTCACAGCC GCTGGGGCTC AGCAGCTTGC CGCTGGCCTG 
AGAAAGTGCC CTCAGGTGAA GACACTGGCG ATGTGGACGC CCACCATCCC CTTTGGCGTC 
CAGGAACACC TGCAGCAGCT GGACCCACGA ATCATTCTGA GATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_010817560.1
CDS	120..3464
Translation	MAGSGQCPTMELGPLEGSYLELLNSSADPLQLYHLYDRMDLTGEEEIELCSEPDTDTINCEQFSRLLCDMEGDEETREAYANIAELDQYVFQDTQLEGLSKDIFIEHIGLEEMISESVELLEEAGQKSQKRPFPEELPVDLKHRKLAEPLTMPVVTGTFLVGPVSDSLVQPCPPPPALFNTEPASSQTRLKDAAPPSSSLLSCLSLPAGPIQIIPTLPTLPQGLWPISGTGTGVSSILIYQSEMPPASQTPPSSGPAVQSLPKSPDRPGSASPFAPSAADLPSMPEPALTSRAGLTEDEMSPTKCPAAGGASSKLPKWPESVEQFYQSLRDKYQAQPTGPEGTLVDMDLVRVRLEKSSGKSQERELATLDWAERQPARGGLAEVLLAASDRQQPRETRVIAVLGKAGHGKSHWARAVSRAWAHGQLPQYDFVFCVPCHRLDRPGTSYRLQDLLSSLGPQPLPVDDEVLSYIARRPNRILLILDGFEDLEAHDGSLHSTGGPGSAEPRSLRGLLAGLLQRKLLRGCTLLLTAWPRGRLAQSLSKVDALFEVAGFSAQQVETYVRRYFESEGTAEHQERALALLQARPFLLSHSHSPTVCRTVCQLAEALLQRSDEAQLPSTLTGLYVGLLGPAARDSPPGALAELARLAWELGRVHQRGLKAGCLPSAEARAWAVAQGWLRPTPGAPETELAFSSFLLQCFLGAVWLALSGEIKDKELPQYLALTPRKKRPYDNWLEGVPRFLVGLVFQPRAGCLGALAGPAATTSADRKQKVLTRYLKRLQPGTLQAGRLLELLHCAHEALDPGLWQHVLQGLPARLSFLGTRLTPPDTHVLGSALEAAGRDFSLDLRSTGVDASGLGSLVGLSCVTRFRAALSDTVELWESLQQRGEAKLLRAVEEKFTIEPFKAKSMKDVEDLGNLVQIQRTRSSSEAAAGELPAVRDLKKLEFALGPVLGPQVFPKLVKILEAFTSLQHLDLDSLSENKIGDEGVAQLSATFPQLKALETLNLSQNNITDVGACKLAEALPALATSLLRLSLYNNCICDAGAESLAHALPDMVSLRVLDVQYNKFTAAGAQQLAAGLRKCPQVKTLAMWTPTIPFGVQEHLQQLDPRIILR

Target ORF information:

RefSeq Version	XM_010819258.3
Organism	Bos taurus(cattle)
Definition	Bos taurus class II major histocompatibility complex transactivator (CIITA), transcript variant X4, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_010819258.3

ORF Insert Sequence:

ATGGCAGGCA GTGGACAGTG CCCAACCATG GAGCTGGGGC CTCTAGAAGG CAGTTACTTA 
GAACTTCTCA ACAGCAGTGC TGACCCTTTG CAGCTCTACC ACCTCTACGA CCGGATGGAT 
CTGACAGGAG AAGAAGAAAT AGAGCTCTGC TCAGAGCCTG ACACAGACAC CATCAACTGC 
GAACAGTTCA GCAGGCTGTT GTGTGACATG GAAGGTGATG AAGAGACCAG GGAAGCTTAT 
GCCAATATCG CGGAATTGGA CCAGTACGTC TTCCAGGACA CCCAGCTGGA GGGCCTGAGC 
AAAGACATTT TCATCGAGCA CATAGGATTG GAAGAAATGA TCAGCGAGAG CGTGGAATTG 
CTGGAGGAGG CAGGGCAGAA AAGTCAGAAG AGACCCTTCC CAGAGGAGCT GCCTGTGGAT 
CTGAAGCACC GGAAGCTAGC CGAGCCCCTC ACCATGCCCG TGGTGACTGG CACTTTCCTG 
GTGGGGCCAG TGAGCGACTC CTTGGTTCAG CCTTGCCCGC CACCTCCTGC TCTGTTCAAC 
ACGGAGCCAG CATCCAGCCA GACCCGGCTG AAGGACGCAG CGCCTCCGTC CAGTTCCTTG 
TTGAGCTGCC TGAGTCTTCC CGCGGGACCC ATTCAGATTA TCCCCACTCT CCCCACTCTG 
CCCCAGGGGC TGTGGCCGAT CTCAGGGACT GGGACGGGGG TCTCCAGTAT ACTCATCTAC 
CAAAGTGAGA TGCCCCCGGC CAGCCAAACA CCCCCATCCA GCGGGCCTGC TGTCCAGAGC 
CTTCCCAAGT CCCCAGACCG GCCTGGCTCT GCCAGCCCCT TTGCCCCGTC TGCCGCTGAC 
CTCCCCAGCA TGCCCGAACC GGCCCTCACC TCCCGTGCAG GCCTGACAGA GGATGAGATG 
TCCCCCACCA AATGCCCAGC AGCTGGCGGG GCCTCCAGCA AACTTCCCAA GTGGCCTGAG 
AGCGTGGAGC AGTTCTACCA GTCGCTACGG GACAAGTACC AGGCCCAGCC CACCGGCCCG 
GAAGGCACCC TGGTGGACAT GGACCTGGTG AGGGTGAGGC TGGAGAAGAG CAGCGGGAAG 
AGCCAGGAGA GAGAGCTGGC CACCCTGGAC TGGGCAGAGC GGCAGCCGGC CCGAGGGGGT 
CTGGCCGAGG TGCTGCTGGC CGCCAGCGAC CGCCAGCAGC CCCGGGAGAC GCGGGTGATC 
GCTGTGCTGG GCAAAGCGGG ACATGGGAAG AGTCACTGGG CCCGGGCCGT GAGCCGGGCC 
TGGGCCCACG GCCAGCTGCC ACAGTACGAC TTTGTCTTCT GTGTCCCCTG CCATCGTTTG 
GACCGTCCGG GGACCTCCTA CCGCCTGCAG GATCTGCTGT CCTCCCTGGG CCCGCAGCCG 
TTGCCAGTGG ACGACGAGGT CCTCAGTTAC ATTGCGAGGA GACCCAACCG CATCCTGCTC 
ATCCTGGATG GCTTCGAGGA CCTGGAAGCC CACGATGGCT CCCTGCACAG CACAGGAGGC 
CCCGGGTCGG CAGAGCCCCG CTCCCTCCGG GGGCTGCTGG CGGGCCTCCT CCAGCGCAAG 
CTGCTGCGGG GCTGCACCCT GCTGCTCACG GCCTGGCCCC GGGGCCGCCT GGCCCAGAGC 
CTGAGCAAGG TGGACGCCCT GTTTGAGGTG GCCGGCTTCT CGGCCCAGCA GGTTGAGACC 
TATGTGAGGC GTTACTTTGA GTCGGAGGGG ACCGCTGAGC ACCAAGAGAG AGCCCTGGCG 
CTCCTGCAGG CCCGGCCGTT CCTCCTGAGC CACAGCCACA GCCCCACCGT GTGCCGGACC 
GTGTGCCAGC TCGCAGAGGC CCTCCTGCAG CGGAGTGATG AAGCCCAGCT GCCCTCCACG 
CTCACGGGCC TCTACGTGGG CCTGCTAGGC CCAGCAGCTC GAGATAGCCC CCCAGGGGCC 
CTGGCGGAAC TGGCCAGGCT GGCCTGGGAG CTGGGCCGTG TGCACCAGAG GGGCCTGAAG 
GCGGGCTGTT TACCGTCGGC GGAGGCGAGG GCCTGGGCTG TGGCCCAAGG CTGGTTGCGG 
CCCACCCCGG GGGCCCCAGA GACGGAGCTG GCCTTCTCCA GCTTCCTCCT GCAGTGCTTC 
CTGGGGGCTG TGTGGCTGGC TCTGAGCGGC GAAATCAAGG ACAAGGAGCT GCCGCAGTAT 
CTGGCCTTGA CCCCGAGGAA GAAGCGGCCC TATGACAACT GGCTGGAGGG CGTGCCGCGC 
TTCTTGGTCG GACTGGTCTT CCAGCCTCGC GCCGGCTGCC TGGGGGCCCT GGCAGGGCCG 
GCGGCCACCA CGTCAGCGGA CAGGAAGCAG AAGGTGCTCA CGAGGTACCT GAAGCGTCTG 
CAGCCCGGGA CGCTGCAGGC GGGGCGGCTG CTGGAGCTGC TGCACTGTGC CCACGAGGCG 
CTGGACCCCG GGCTCTGGCA GCACGTGCTG CAGGGGCTCC CTGCCCGCCT CTCCTTCCTG 
GGCACACGGC TCACGCCTCC TGACACCCAT GTGCTGGGCA GCGCCCTGGA GGCCGCGGGC 
CGAGACTTTT CCCTGGACCT CCGCAGCACT GGCGTCGACG CCTCTGGACT GGGGAGCCTC 
GTGGGACTCA GCTGTGTCAC CCGTTTCAGG GCTGCATTGA GTGACACTGT GGAGCTATGG 
GAGTCCCTGC AGCAGCGTGG GGAGGCCAAG CTACTCCGGG CAGTGGAGGA GAAGTTCACC 
ATCGAGCCTT TCAAGGCCAA GTCCATGAAG GATGTGGAAG ACCTTGGCAA TCTCGTGCAG 
ATCCAGAGGA CAAGAAGCTC CTCTGAAGCA GCAGCTGGGG AGCTCCCTGC TGTCCGAGAC 
TTAAAGAAGC TGGAGTTTGC GCTGGGCCCT GTCTTGGGCC CACAGGTTTT TCCTAAACTG 
GTGAAGATCC TTGAGGCCTT TACTTCCCTT CAGCATCTAG ACCTGGACTC GCTGAGCGAG 
AACAAGATTG GGGACGAGGG TGTCGCCCAG CTCTCAGCCA CCTTCCCTCA GCTGAAGGCC 
CTGGAGACAC TCAACTTGTC CCAGAACAAC ATCACCGACG TGGGTGCCTG CAAGCTGGCC 
GAGGCTCTGC CCGCGCTGGC CACGTCCCTC CTCAGGTTGA GCTTGTACAA TAACTGTATC 
TGCGACGCGG GAGCCGAGAG CCTGGCGCAC GCGCTTCCAG ACATGGTGTC CCTCCGGGTG 
CTGGACGTCC AGTACAACAA GTTCACAGCC GCTGGGGCTC AGCAGCTTGC CGCTGGCCTG 
AGAAAGTGCC CTCAGGTGAA GACACTGGCG ATGTGGACGC CCACCATCCC CTTTGGCGTC 
CAGGAACACC TGCAGCAGCT GGACCCACGA ATCATTCTGA GATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

CIITA ( XM_010819255.2 ) cDNA ORF clone, Bos taurus(cattle) -> XP_010817557.1 Bos taurus class II, major histocompatibility complex, transactivator (CIITA), transcript variant X1, mRNA.

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CloneID	OBa47246
Clone ID Related Accession (Same CDS sequence)	XM_010819255.2 , XM_015469297.1 , XM_010819255.3
Accession Version	XM_010819255.2	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3621bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-01-25
Organism	Bos taurus(cattle)
Product	MHC class II transactivator isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003104571.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jan 26, 2016 this sequence version replaced XM_010819255.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bos taurus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGAATCACT TCCAGACCAT CCTGTCTCAG GTCCGGATGT TGCTCTCTAG CCATCGGCCG 
AGCCAAGTGC AGGCGCTTCT GGACAACCTG CTGGCGGAAG AGCTCCTCTC CAGGGAGTAC 
CACCATGCCC TGCTCCATGA GTCTGATGGT GAGGCTCTGG CCAGGAAGAT CTCCTTGACC 
CTGCTGGAGA AAGGAGACCC AGACTTCGCC CTCTTGGGGT GGATCTGGAG TGGGCTGCAG 
GCCCCCACAG CAGAGAGGGG CCCCAGCTAC AAGGACCCTG GTGGCAGTGG ACAGTGCCCA 
ACCATGGAGC TGGGGCCTCT AGAAGGCAGT TACTTAGAAC TTCTCAACAG CAGTGCTGAC 
CCTTTGCAGC TCTACCACCT CTACGACCGG ATGGATCTGA CAGGAGAAGA AGAAATAGAG 
CTCTGCTCAG AGCCTGACAC AGACACCATC AACTGCGAAC AGTTCAGCAG GCTGTTGTGT 
GACATGGAAG GTGATGAAGA GACCAGGGAA GCTTATGCCA ATATCGCGGA ATTGGACCAG 
TACGTCTTCC AGGACACCCA GCTGGAGGGC CTGAGCAAAG ACATTTTCAT CGAGCACATA 
GGATTGGAAG AAATGATCAG CGAGAGCGTG GAATTGCTGG AGGAGGCAGG GCAGAAAAGT 
CAGAAGAGAC CCTTCCCAGA GGAGCTGCCT GTGGATCTGA AGCACCGGAA GCTAGCCGAG 
CCCCTCACCA TGCCCGTGGT GACTGGCACT TTCCTGGTGG GGCCAGTGAG CGACTCCTTG 
GTTCAGCCTT GCCCGCCACC TCCTGCTCTG TTCAACACGG AGCCAGCATC CAGCCAGACC 
CGGCTGAAGG ACGCAGCGCC TCCGTCCAGT TCCTTGTTGA GCTGCCTGAG TCTTCCCGCG 
GGACCCATTC AGATTATCCC CACTCTCCCC ACTCTGCCCC AGGGGCTGTG GCCGATCTCA 
GGGACTGGGA CGGGGGTCTC CAGTATACTC ATCTACCAAA GTGAGATGCC CCCGGCCAGC 
CAAACACCCC CATCCAGCGG GCCTGCTGTC CAGAGCCTTC CCAAGTCCCC AGACCGGCCT 
GGCTCTGCCA GCCCCTTTGC CCCGTCTGCC GCTGACCTCC CCAGCATGCC CGAACCGGCC 
CTCACCTCCC GTGCAGGCCT GACAGAGGAT GAGATGTCCC CCACCAAATG CCCAGCAGCT 
GGCGGGGCCT CCAGCAAACT TCCCAAGTGG CCTGAGAGCG TGGAGCAGTT CTACCAGTCG 
CTACGGGACA AGTACCAGGC CCAGCCCACC GGCCCGGAAG GCACCCTGGT GGACATGGAC 
CTGGTGAGGG TGAGGCTGGA GAAGAGCAGC GGGAAGAGCC AGGAGAGAGA GCTGGCCACC 
CTGGACTGGG CAGAGCGGCA GCCGGCCCGA GGGGGTCTGG CCGAGGTGCT GCTGGCCGCC 
AGCGACCGCC AGCAGCCCCG GGAGACGCGG GTGATCGCTG TGCTGGGCAA AGCGGGACAT 
GGGAAGAGTC ACTGGGCCCG GGCCGTGAGC CGGGCCTGGG CCCACGGCCA GCTGCCACAG 
TACGACTTTG TCTTCTGTGT CCCCTGCCAT CGTTTGGACC GTCCGGGGAC CTCCTACCGC 
CTGCAGGATC TGCTGTCCTC CCTGGGCCCG CAGCCGTTGC CAGTGGACGA CGAGGTCCTC 
AGTTACATTG CGAGGAGACC CAACCGCATC CTGCTCATCC TGGATGGCTT CGAGGACCTG 
GAAGCCCACG ATGGCTCCCT GCACAGCACA GGAGGCCCCG GGTCGGCAGA GCCCCGCTCC 
CTCCGGGGGC TGCTGGCGGG CCTCCTCCAG CGCAAGCTGC TGCGGGGCTG CACCCTGCTG 
CTCACGGCCT GGCCCCGGGG CCGCCTGGCC CAGAGCCTGA GCAAGGTGGA CGCCCTGTTT 
GAGGTGGCCG GCTTCTCGGC CCAGCAGGTT GAGACCTATG TGAGGCGTTA CTTTGAGTCG 
GAGGGGACCG CTGAGCACCA AGAGAGAGCC CTGGCGCTCC TGCAGGCCCG GCCGTTCCTC 
CTGAGCCACA GCCACAGCCC CACCGTGTGC CGGACCGTGT GCCAGCTCGC AGAGGCCCTC 
CTGCAGCGGA GTGATGAAGC CCAGCTGCCC TCCACGCTCA CGGGCCTCTA CGTGGGCCTG 
CTAGGCCCAG CAGCTCGAGA TAGCCCCCCA GGGGCCCTGG CGGAACTGGC CAGGCTGGCC 
TGGGAGCTGG GCCGTGTGCA CCAGAGGGGC CTGAAGGCGG GCTGTTTACC GTCGGCGGAG 
GCGAGGGCCT GGGCTGTGGC CCAAGGCTGG TTGCGGCCCA CCCCGGGGGC CCCAGAGACG 
GAGCTGGCCT TCTCCAGCTT CCTCCTGCAG TGCTTCCTGG GGGCTGTGTG GCTGGCTCTG 
AGCGGCGAAA TCAAGGACAA GGAGCTGCCG CAGTATCTGG CCTTGACCCC GAGGAAGAAG 
CGGCCCTATG ACAACTGGCT GGAGGGCGTG CCGCGCTTCT TGGTCGGACT GGTCTTCCAG 
CCTCGCGCCG GCTGCCTGGG GGCCCTGGCA GGGCCGGCGG CCACCACGTC AGCGGACAGG 
AAGCAGAAGG TGCTCACGAG GTACCTGAAG CGTCTGCAGC CCGGGACGCT GCAGGCGGGG 
CGGCTGCTGG AGCTGCTGCA CTGTGCCCAC GAGGCGCTGG ACCCCGGGCT CTGGCAGCAC 
GTGCTGCAGG GGCTCCCTGC CCGCCTCTCC TTCCTGGGCA CACGGCTCAC GCCTCCTGAC 
ACCCATGTGC TGGGCAGCGC CCTGGAGGCC GCGGGCCGAG ACTTTTCCCT GGACCTCCGC 
AGCACTGGCG TCGACGCCTC TGGACTGGGG AGCCTCGTGG GACTCAGCTG TGTCACCCGT 
TTCAGGGCTG CATTGAGTGA CACTGTGGAG CTATGGGAGT CCCTGCAGCA GCGTGGGGAG 
GCCAAGCTAC TCCGGGCAGT GGAGGAGAAG TTCACCATCG AGCCTTTCAA GGCCAAGTCC 
ATGAAGGATG TGGAAGACCT TGGCAATCTC GTGCAGATCC AGAGGACAAG AAGCTCCTCT 
GAAGCAGCAG CTGGGGAGCT CCCTGCTGTC CGAGACTTAA AGAAGCTGGA GTTTGCGCTG 
GGCCCTGTCT TGGGCCCACA GGTTTTTCCT AAACTGGTGA AGATCCTTGA GGCCTTTACT 
TCCCTTCAGC ATCTAGACCT GGACTCGCTG AGCGAGAACA AGATTGGGGA CGAGGGTGTC 
GCCCAGCTCT CAGCCACCTT CCCTCAGCTG AAGGCCCTGG AGACACTCAA CTTGTCCCAG 
AACAACATCA CCGACGTGGG TGCCTGCAAG CTGGCCGAGG CTCTGCCCGC GCTGGCCACG 
TCCCTCCTCA GGTTGAGCTT GTACAATAAC TGTATCTGCG ACGCGGGAGC CGAGAGCCTG 
GCGCACGCGC TTCCAGACAT GGTGTCCCTC CGGGTGCTGG ACGTCCAGTA CAACAAGTTC 
ACAGCCGCTG GGGCTCAGCA GCTTGCCGCT GGCCTGAGAA AGTGCCCTCA GGTGAAGACA 
CTGGCGATGT GGACGCCCAC CATCCCCTTT GGCGTCCAGG AACACCTGCA GCAGCTGGAC 
CCACGAATCA TTCTGAGATG A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_010817557.1
CDS	265..3885
Translation	MNHFQTILSQVRMLLSSHRPSQVQALLDNLLAEELLSREYHHALLHESDGEALARKISLTLLEKGDPDFALLGWIWSGLQAPTAERGPSYKDPGGSGQCPTMELGPLEGSYLELLNSSADPLQLYHLYDRMDLTGEEEIELCSEPDTDTINCEQFSRLLCDMEGDEETREAYANIAELDQYVFQDTQLEGLSKDIFIEHIGLEEMISESVELLEEAGQKSQKRPFPEELPVDLKHRKLAEPLTMPVVTGTFLVGPVSDSLVQPCPPPPALFNTEPASSQTRLKDAAPPSSSLLSCLSLPAGPIQIIPTLPTLPQGLWPISGTGTGVSSILIYQSEMPPASQTPPSSGPAVQSLPKSPDRPGSASPFAPSAADLPSMPEPALTSRAGLTEDEMSPTKCPAAGGASSKLPKWPESVEQFYQSLRDKYQAQPTGPEGTLVDMDLVRVRLEKSSGKSQERELATLDWAERQPARGGLAEVLLAASDRQQPRETRVIAVLGKAGHGKSHWARAVSRAWAHGQLPQYDFVFCVPCHRLDRPGTSYRLQDLLSSLGPQPLPVDDEVLSYIARRPNRILLILDGFEDLEAHDGSLHSTGGPGSAEPRSLRGLLAGLLQRKLLRGCTLLLTAWPRGRLAQSLSKVDALFEVAGFSAQQVETYVRRYFESEGTAEHQERALALLQARPFLLSHSHSPTVCRTVCQLAEALLQRSDEAQLPSTLTGLYVGLLGPAARDSPPGALAELARLAWELGRVHQRGLKAGCLPSAEARAWAVAQGWLRPTPGAPETELAFSSFLLQCFLGAVWLALSGEIKDKELPQYLALTPRKKRPYDNWLEGVPRFLVGLVFQPRAGCLGALAGPAATTSADRKQKVLTRYLKRLQPGTLQAGRLLELLHCAHEALDPGLWQHVLQGLPARLSFLGTRLTPPDTHVLGSALEAAGRDFSLDLRSTGVDASGLGSLVGLSCVTRFRAALSDTVELWESLQQRGEAKLLRAVEEKFTIEPFKAKSMKDVEDLGNLVQIQRTRSSSEAAAGELPAVRDLKKLEFALGPVLGPQVFPKLVKILEAFTSLQHLDLDSLSENKIGDEGVAQLSATFPQLKALETLNLSQNNITDVGACKLAEALPALATSLLRLSLYNNCICDAGAESLAHALPDMVSLRVLDVQYNKFTAAGAQQLAAGLRKCPQVKTLAMWTPTIPFGVQEHLQQLDPRIILR

Target ORF information:

RefSeq Version	XM_010819255.2
Organism	Bos taurus(cattle)
Definition	Bos taurus class II, major histocompatibility complex, transactivator (CIITA), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_010819255.2

ORF Insert Sequence:

ATGAATCACT TCCAGACCAT CCTGTCTCAG GTCCGGATGT TGCTCTCTAG CCATCGGCCG 
AGCCAAGTGC AGGCGCTTCT GGACAACCTG CTGGCGGAAG AGCTCCTCTC CAGGGAGTAC 
CACCATGCCC TGCTCCATGA GTCTGATGGT GAGGCTCTGG CCAGGAAGAT CTCCTTGACC 
CTGCTGGAGA AAGGAGACCC AGACTTCGCC CTCTTGGGGT GGATCTGGAG TGGGCTGCAG 
GCCCCCACAG CAGAGAGGGG CCCCAGCTAC AAGGACCCTG GTGGCAGTGG ACAGTGCCCA 
ACCATGGAGC TGGGGCCTCT AGAAGGCAGT TACTTAGAAC TTCTCAACAG CAGTGCTGAC 
CCTTTGCAGC TCTACCACCT CTACGACCGG ATGGATCTGA CAGGAGAAGA AGAAATAGAG 
CTCTGCTCAG AGCCTGACAC AGACACCATC AACTGCGAAC AGTTCAGCAG GCTGTTGTGT 
GACATGGAAG GTGATGAAGA GACCAGGGAA GCTTATGCCA ATATCGCGGA ATTGGACCAG 
TACGTCTTCC AGGACACCCA GCTGGAGGGC CTGAGCAAAG ACATTTTCAT CGAGCACATA 
GGATTGGAAG AAATGATCAG CGAGAGCGTG GAATTGCTGG AGGAGGCAGG GCAGAAAAGT 
CAGAAGAGAC CCTTCCCAGA GGAGCTGCCT GTGGATCTGA AGCACCGGAA GCTAGCCGAG 
CCCCTCACCA TGCCCGTGGT GACTGGCACT TTCCTGGTGG GGCCAGTGAG CGACTCCTTG 
GTTCAGCCTT GCCCGCCACC TCCTGCTCTG TTCAACACGG AGCCAGCATC CAGCCAGACC 
CGGCTGAAGG ACGCAGCGCC TCCGTCCAGT TCCTTGTTGA GCTGCCTGAG TCTTCCCGCG 
GGACCCATTC AGATTATCCC CACTCTCCCC ACTCTGCCCC AGGGGCTGTG GCCGATCTCA 
GGGACTGGGA CGGGGGTCTC CAGTATACTC ATCTACCAAA GTGAGATGCC CCCGGCCAGC 
CAAACACCCC CATCCAGCGG GCCTGCTGTC CAGAGCCTTC CCAAGTCCCC AGACCGGCCT 
GGCTCTGCCA GCCCCTTTGC CCCGTCTGCC GCTGACCTCC CCAGCATGCC CGAACCGGCC 
CTCACCTCCC GTGCAGGCCT GACAGAGGAT GAGATGTCCC CCACCAAATG CCCAGCAGCT 
GGCGGGGCCT CCAGCAAACT TCCCAAGTGG CCTGAGAGCG TGGAGCAGTT CTACCAGTCG 
CTACGGGACA AGTACCAGGC CCAGCCCACC GGCCCGGAAG GCACCCTGGT GGACATGGAC 
CTGGTGAGGG TGAGGCTGGA GAAGAGCAGC GGGAAGAGCC AGGAGAGAGA GCTGGCCACC 
CTGGACTGGG CAGAGCGGCA GCCGGCCCGA GGGGGTCTGG CCGAGGTGCT GCTGGCCGCC 
AGCGACCGCC AGCAGCCCCG GGAGACGCGG GTGATCGCTG TGCTGGGCAA AGCGGGACAT 
GGGAAGAGTC ACTGGGCCCG GGCCGTGAGC CGGGCCTGGG CCCACGGCCA GCTGCCACAG 
TACGACTTTG TCTTCTGTGT CCCCTGCCAT CGTTTGGACC GTCCGGGGAC CTCCTACCGC 
CTGCAGGATC TGCTGTCCTC CCTGGGCCCG CAGCCGTTGC CAGTGGACGA CGAGGTCCTC 
AGTTACATTG CGAGGAGACC CAACCGCATC CTGCTCATCC TGGATGGCTT CGAGGACCTG 
GAAGCCCACG ATGGCTCCCT GCACAGCACA GGAGGCCCCG GGTCGGCAGA GCCCCGCTCC 
CTCCGGGGGC TGCTGGCGGG CCTCCTCCAG CGCAAGCTGC TGCGGGGCTG CACCCTGCTG 
CTCACGGCCT GGCCCCGGGG CCGCCTGGCC CAGAGCCTGA GCAAGGTGGA CGCCCTGTTT 
GAGGTGGCCG GCTTCTCGGC CCAGCAGGTT GAGACCTATG TGAGGCGTTA CTTTGAGTCG 
GAGGGGACCG CTGAGCACCA AGAGAGAGCC CTGGCGCTCC TGCAGGCCCG GCCGTTCCTC 
CTGAGCCACA GCCACAGCCC CACCGTGTGC CGGACCGTGT GCCAGCTCGC AGAGGCCCTC 
CTGCAGCGGA GTGATGAAGC CCAGCTGCCC TCCACGCTCA CGGGCCTCTA CGTGGGCCTG 
CTAGGCCCAG CAGCTCGAGA TAGCCCCCCA GGGGCCCTGG CGGAACTGGC CAGGCTGGCC 
TGGGAGCTGG GCCGTGTGCA CCAGAGGGGC CTGAAGGCGG GCTGTTTACC GTCGGCGGAG 
GCGAGGGCCT GGGCTGTGGC CCAAGGCTGG TTGCGGCCCA CCCCGGGGGC CCCAGAGACG 
GAGCTGGCCT TCTCCAGCTT CCTCCTGCAG TGCTTCCTGG GGGCTGTGTG GCTGGCTCTG 
AGCGGCGAAA TCAAGGACAA GGAGCTGCCG CAGTATCTGG CCTTGACCCC GAGGAAGAAG 
CGGCCCTATG ACAACTGGCT GGAGGGCGTG CCGCGCTTCT TGGTCGGACT GGTCTTCCAG 
CCTCGCGCCG GCTGCCTGGG GGCCCTGGCA GGGCCGGCGG CCACCACGTC AGCGGACAGG 
AAGCAGAAGG TGCTCACGAG GTACCTGAAG CGTCTGCAGC CCGGGACGCT GCAGGCGGGG 
CGGCTGCTGG AGCTGCTGCA CTGTGCCCAC GAGGCGCTGG ACCCCGGGCT CTGGCAGCAC 
GTGCTGCAGG GGCTCCCTGC CCGCCTCTCC TTCCTGGGCA CACGGCTCAC GCCTCCTGAC 
ACCCATGTGC TGGGCAGCGC CCTGGAGGCC GCGGGCCGAG ACTTTTCCCT GGACCTCCGC 
AGCACTGGCG TCGACGCCTC TGGACTGGGG AGCCTCGTGG GACTCAGCTG TGTCACCCGT 
TTCAGGGCTG CATTGAGTGA CACTGTGGAG CTATGGGAGT CCCTGCAGCA GCGTGGGGAG 
GCCAAGCTAC TCCGGGCAGT GGAGGAGAAG TTCACCATCG AGCCTTTCAA GGCCAAGTCC 
ATGAAGGATG TGGAAGACCT TGGCAATCTC GTGCAGATCC AGAGGACAAG AAGCTCCTCT 
GAAGCAGCAG CTGGGGAGCT CCCTGCTGTC CGAGACTTAA AGAAGCTGGA GTTTGCGCTG 
GGCCCTGTCT TGGGCCCACA GGTTTTTCCT AAACTGGTGA AGATCCTTGA GGCCTTTACT 
TCCCTTCAGC ATCTAGACCT GGACTCGCTG AGCGAGAACA AGATTGGGGA CGAGGGTGTC 
GCCCAGCTCT CAGCCACCTT CCCTCAGCTG AAGGCCCTGG AGACACTCAA CTTGTCCCAG 
AACAACATCA CCGACGTGGG TGCCTGCAAG CTGGCCGAGG CTCTGCCCGC GCTGGCCACG 
TCCCTCCTCA GGTTGAGCTT GTACAATAAC TGTATCTGCG ACGCGGGAGC CGAGAGCCTG 
GCGCACGCGC TTCCAGACAT GGTGTCCCTC CGGGTGCTGG ACGTCCAGTA CAACAAGTTC 
ACAGCCGCTG GGGCTCAGCA GCTTGCCGCT GGCCTGAGAA AGTGCCCTCA GGTGAAGACA 
CTGGCGATGT GGACGCCCAC CATCCCCTTT GGCGTCCAGG AACACCTGCA GCAGCTGGAC 
CCACGAATCA TTCTGAGATG A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

CIITA ( XM_015469297.1 ) cDNA ORF clone, Bos taurus(cattle) -> XP_015324783.1 Bos taurus class II, major histocompatibility complex, transactivator (CIITA), transcript variant X1, mRNA.

Price & Availability↑

CloneID	OBa47246
Clone ID Related Accession (Same CDS sequence)	XM_010819255.2 , XM_015469297.1 , XM_010819255.3
Accession Version	XM_015469297.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3621bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-01-25
Organism	Bos taurus(cattle)
Product	MHC class II transactivator isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_014646645.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bos taurus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGAATCACT TCCAGACCAT CCTGTCTCAG GTCCGGATGT TGCTCTCTAG CCATCGGCCG 
AGCCAAGTGC AGGCGCTTCT GGACAACCTG CTGGCGGAAG AGCTCCTCTC CAGGGAGTAC 
CACCATGCCC TGCTCCATGA GTCTGATGGT GAGGCTCTGG CCAGGAAGAT CTCCTTGACC 
CTGCTGGAGA AAGGAGACCC AGACTTCGCC CTCTTGGGGT GGATCTGGAG TGGGCTGCAG 
GCCCCCACAG CAGAGAGGGG CCCCAGCTAC AAGGACCCTG GTGGCAGTGG ACAGTGCCCA 
ACCATGGAGC TGGGGCCTCT AGAAGGCAGT TACTTAGAAC TTCTCAACAG CAGTGCTGAC 
CCTTTGCAGC TCTACCACCT CTACGACCGG ATGGATCTGA CAGGAGAAGA AGAAATAGAG 
CTCTGCTCAG AGCCTGACAC AGACACCATC AACTGCGAAC AGTTCAGCAG GCTGTTGTGT 
GACATGGAAG GTGATGAAGA GACCAGGGAA GCTTATGCCA ATATCGCGGA ATTGGACCAG 
TACGTCTTCC AGGACACCCA GCTGGAGGGC CTGAGCAAAG ACATTTTCAT CGAGCACATA 
GGATTGGAAG AAATGATCAG CGAGAGCGTG GAATTGCTGG AGGAGGCAGG GCAGAAAAGT 
CAGAAGAGAC CCTTCCCAGA GGAGCTGCCT GTGGATCTGA AGCACCGGAA GCTAGCCGAG 
CCCCTCACCA TGCCCGTGGT GACTGGCACT TTCCTGGTGG GGCCAGTGAG CGACTCCTTG 
GTTCAGCCTT GCCCGCCACC TCCTGCTCTG TTCAACACGG AGCCAGCATC CAGCCAGACC 
CGGCTGAAGG ACGCAGCGCC TCCGTCCAGT TCCTTGTTGA GCTGCCTGAG TCTTCCCGCG 
GGACCCATTC AGATTATCCC CACTCTCCCC ACTCTGCCCC AGGGGCTGTG GCCGATCTCA 
GGGACTGGGA CGGGGGTCTC CAGTATACTC ATCTACCAAA GTGAGATGCC CCCGGCCAGC 
CAAACACCCC CATCCAGCGG GCCTGCTGTC CAGAGCCTTC CCAAGTCCCC AGACCGGCCT 
GGCTCTGCCA GCCCCTTTGC CCCGTCTGCC GCTGACCTCC CCAGCATGCC CGAACCGGCC 
CTCACCTCCC GTGCAGGCCT GACAGAGGAT GAGATGTCCC CCACCAAATG CCCAGCAGCT 
GGCGGGGCCT CCAGCAAACT TCCCAAGTGG CCTGAGAGCG TGGAGCAGTT CTACCAGTCG 
CTACGGGACA AGTACCAGGC CCAGCCCACC GGCCCGGAAG GCACCCTGGT GGACATGGAC 
CTGGTGAGGG TGAGGCTGGA GAAGAGCAGC GGGAAGAGCC AGGAGAGAGA GCTGGCCACC 
CTGGACTGGG CAGAGCGGCA GCCGGCCCGA GGGGGTCTGG CCGAGGTGCT GCTGGCCGCC 
AGCGACCGCC AGCAGCCCCG GGAGACGCGG GTGATCGCTG TGCTGGGCAA AGCGGGACAT 
GGGAAGAGTC ACTGGGCCCG GGCCGTGAGC CGGGCCTGGG CCCACGGCCA GCTGCCACAG 
TACGACTTTG TCTTCTGTGT CCCCTGCCAT CGTTTGGACC GTCCGGGGAC CTCCTACCGC 
CTGCAGGATC TGCTGTCCTC CCTGGGCCCG CAGCCGTTGC CAGTGGACGA CGAGGTCCTC 
AGTTACATTG CGAGGAGACC CAACCGCATC CTGCTCATCC TGGATGGCTT CGAGGACCTG 
GAAGCCCACG ATGGCTCCCT GCACAGCACA GGAGGCCCCG GGTCGGCAGA GCCCCGCTCC 
CTCCGGGGGC TGCTGGCGGG CCTCCTCCAG CGCAAGCTGC TGCGGGGCTG CACCCTGCTG 
CTCACGGCCT GGCCCCGGGG CCGCCTGGCC CAGAGCCTGA GCAAGGTGGA CGCCCTGTTT 
GAGGTGGCCG GCTTCTCGGC CCAGCAGGTT GAGACCTATG TGAGGCGTTA CTTTGAGTCG 
GAGGGGACCG CTGAGCACCA AGAGAGAGCC CTGGCGCTCC TGCAGGCCCG GCCGTTCCTC 
CTGAGCCACA GCCACAGCCC CACCGTGTGC CGGACCGTGT GCCAGCTCGC AGAGGCCCTC 
CTGCAGCGGA GTGATGAAGC CCAGCTGCCC TCCACGCTCA CGGGCCTCTA CGTGGGCCTG 
CTAGGCCCAG CAGCTCGAGA TAGCCCCCCA GGGGCCCTGG CGGAACTGGC CAGGCTGGCC 
TGGGAGCTGG GCCGTGTGCA CCAGAGGGGC CTGAAGGCGG GCTGTTTACC GTCGGCGGAG 
GCGAGGGCCT GGGCTGTGGC CCAAGGCTGG TTGCGGCCCA CCCCGGGGGC CCCAGAGACG 
GAGCTGGCCT TCTCCAGCTT CCTCCTGCAG TGCTTCCTGG GGGCTGTGTG GCTGGCTCTG 
AGCGGCGAAA TCAAGGACAA GGAGCTGCCG CAGTATCTGG CCTTGACCCC GAGGAAGAAG 
CGGCCCTATG ACAACTGGCT GGAGGGCGTG CCGCGCTTCT TGGTCGGACT GGTCTTCCAG 
CCTCGCGCCG GCTGCCTGGG GGCCCTGGCA GGGCCGGCGG CCACCACGTC AGCGGACAGG 
AAGCAGAAGG TGCTCACGAG GTACCTGAAG CGTCTGCAGC CCGGGACGCT GCAGGCGGGG 
CGGCTGCTGG AGCTGCTGCA CTGTGCCCAC GAGGCGCTGG ACCCCGGGCT CTGGCAGCAC 
GTGCTGCAGG GGCTCCCTGC CCGCCTCTCC TTCCTGGGCA CACGGCTCAC GCCTCCTGAC 
ACCCATGTGC TGGGCAGCGC CCTGGAGGCC GCGGGCCGAG ACTTTTCCCT GGACCTCCGC 
AGCACTGGCG TCGACGCCTC TGGACTGGGG AGCCTCGTGG GACTCAGCTG TGTCACCCGT 
TTCAGGGCTG CATTGAGTGA CACTGTGGAG CTATGGGAGT CCCTGCAGCA GCGTGGGGAG 
GCCAAGCTAC TCCGGGCAGT GGAGGAGAAG TTCACCATCG AGCCTTTCAA GGCCAAGTCC 
ATGAAGGATG TGGAAGACCT TGGCAATCTC GTGCAGATCC AGAGGACAAG AAGCTCCTCT 
GAAGCAGCAG CTGGGGAGCT CCCTGCTGTC CGAGACTTAA AGAAGCTGGA GTTTGCGCTG 
GGCCCTGTCT TGGGCCCACA GGTTTTTCCT AAACTGGTGA AGATCCTTGA GGCCTTTACT 
TCCCTTCAGC ATCTAGACCT GGACTCGCTG AGCGAGAACA AGATTGGGGA CGAGGGTGTC 
GCCCAGCTCT CAGCCACCTT CCCTCAGCTG AAGGCCCTGG AGACACTCAA CTTGTCCCAG 
AACAACATCA CCGACGTGGG TGCCTGCAAG CTGGCCGAGG CTCTGCCCGC GCTGGCCACG 
TCCCTCCTCA GGTTGAGCTT GTACAATAAC TGTATCTGCG ACGCGGGAGC CGAGAGCCTG 
GCGCACGCGC TTCCAGACAT GGTGTCCCTC CGGGTGCTGG ACGTCCAGTA CAACAAGTTC 
ACAGCCGCTG GGGCTCAGCA GCTTGCCGCT GGCCTGAGAA AGTGCCCTCA GGTGAAGACA 
CTGGCGATGT GGACGCCCAC CATCCCCTTT GGCGTCCAGG AACACCTGCA GCAGCTGGAC 
CCACGAATCA TTCTGAGATG A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_015324783.1
CDS	265..3885
Translation	MNHFQTILSQVRMLLSSHRPSQVQALLDNLLAEELLSREYHHALLHESDGEALARKISLTLLEKGDPDFALLGWIWSGLQAPTAERGPSYKDPGGSGQCPTMELGPLEGSYLELLNSSADPLQLYHLYDRMDLTGEEEIELCSEPDTDTINCEQFSRLLCDMEGDEETREAYANIAELDQYVFQDTQLEGLSKDIFIEHIGLEEMISESVELLEEAGQKSQKRPFPEELPVDLKHRKLAEPLTMPVVTGTFLVGPVSDSLVQPCPPPPALFNTEPASSQTRLKDAAPPSSSLLSCLSLPAGPIQIIPTLPTLPQGLWPISGTGTGVSSILIYQSEMPPASQTPPSSGPAVQSLPKSPDRPGSASPFAPSAADLPSMPEPALTSRAGLTEDEMSPTKCPAAGGASSKLPKWPESVEQFYQSLRDKYQAQPTGPEGTLVDMDLVRVRLEKSSGKSQERELATLDWAERQPARGGLAEVLLAASDRQQPRETRVIAVLGKAGHGKSHWARAVSRAWAHGQLPQYDFVFCVPCHRLDRPGTSYRLQDLLSSLGPQPLPVDDEVLSYIARRPNRILLILDGFEDLEAHDGSLHSTGGPGSAEPRSLRGLLAGLLQRKLLRGCTLLLTAWPRGRLAQSLSKVDALFEVAGFSAQQVETYVRRYFESEGTAEHQERALALLQARPFLLSHSHSPTVCRTVCQLAEALLQRSDEAQLPSTLTGLYVGLLGPAARDSPPGALAELARLAWELGRVHQRGLKAGCLPSAEARAWAVAQGWLRPTPGAPETELAFSSFLLQCFLGAVWLALSGEIKDKELPQYLALTPRKKRPYDNWLEGVPRFLVGLVFQPRAGCLGALAGPAATTSADRKQKVLTRYLKRLQPGTLQAGRLLELLHCAHEALDPGLWQHVLQGLPARLSFLGTRLTPPDTHVLGSALEAAGRDFSLDLRSTGVDASGLGSLVGLSCVTRFRAALSDTVELWESLQQRGEAKLLRAVEEKFTIEPFKAKSMKDVEDLGNLVQIQRTRSSSEAAAGELPAVRDLKKLEFALGPVLGPQVFPKLVKILEAFTSLQHLDLDSLSENKIGDEGVAQLSATFPQLKALETLNLSQNNITDVGACKLAEALPALATSLLRLSLYNNCICDAGAESLAHALPDMVSLRVLDVQYNKFTAAGAQQLAAGLRKCPQVKTLAMWTPTIPFGVQEHLQQLDPRIILR

Target ORF information:

RefSeq Version	XM_015469297.1
Organism	Bos taurus(cattle)
Definition	Bos taurus class II, major histocompatibility complex, transactivator (CIITA), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_015469297.1

ORF Insert Sequence:

ATGAATCACT TCCAGACCAT CCTGTCTCAG GTCCGGATGT TGCTCTCTAG CCATCGGCCG 
AGCCAAGTGC AGGCGCTTCT GGACAACCTG CTGGCGGAAG AGCTCCTCTC CAGGGAGTAC 
CACCATGCCC TGCTCCATGA GTCTGATGGT GAGGCTCTGG CCAGGAAGAT CTCCTTGACC 
CTGCTGGAGA AAGGAGACCC AGACTTCGCC CTCTTGGGGT GGATCTGGAG TGGGCTGCAG 
GCCCCCACAG CAGAGAGGGG CCCCAGCTAC AAGGACCCTG GTGGCAGTGG ACAGTGCCCA 
ACCATGGAGC TGGGGCCTCT AGAAGGCAGT TACTTAGAAC TTCTCAACAG CAGTGCTGAC 
CCTTTGCAGC TCTACCACCT CTACGACCGG ATGGATCTGA CAGGAGAAGA AGAAATAGAG 
CTCTGCTCAG AGCCTGACAC AGACACCATC AACTGCGAAC AGTTCAGCAG GCTGTTGTGT 
GACATGGAAG GTGATGAAGA GACCAGGGAA GCTTATGCCA ATATCGCGGA ATTGGACCAG 
TACGTCTTCC AGGACACCCA GCTGGAGGGC CTGAGCAAAG ACATTTTCAT CGAGCACATA 
GGATTGGAAG AAATGATCAG CGAGAGCGTG GAATTGCTGG AGGAGGCAGG GCAGAAAAGT 
CAGAAGAGAC CCTTCCCAGA GGAGCTGCCT GTGGATCTGA AGCACCGGAA GCTAGCCGAG 
CCCCTCACCA TGCCCGTGGT GACTGGCACT TTCCTGGTGG GGCCAGTGAG CGACTCCTTG 
GTTCAGCCTT GCCCGCCACC TCCTGCTCTG TTCAACACGG AGCCAGCATC CAGCCAGACC 
CGGCTGAAGG ACGCAGCGCC TCCGTCCAGT TCCTTGTTGA GCTGCCTGAG TCTTCCCGCG 
GGACCCATTC AGATTATCCC CACTCTCCCC ACTCTGCCCC AGGGGCTGTG GCCGATCTCA 
GGGACTGGGA CGGGGGTCTC CAGTATACTC ATCTACCAAA GTGAGATGCC CCCGGCCAGC 
CAAACACCCC CATCCAGCGG GCCTGCTGTC CAGAGCCTTC CCAAGTCCCC AGACCGGCCT 
GGCTCTGCCA GCCCCTTTGC CCCGTCTGCC GCTGACCTCC CCAGCATGCC CGAACCGGCC 
CTCACCTCCC GTGCAGGCCT GACAGAGGAT GAGATGTCCC CCACCAAATG CCCAGCAGCT 
GGCGGGGCCT CCAGCAAACT TCCCAAGTGG CCTGAGAGCG TGGAGCAGTT CTACCAGTCG 
CTACGGGACA AGTACCAGGC CCAGCCCACC GGCCCGGAAG GCACCCTGGT GGACATGGAC 
CTGGTGAGGG TGAGGCTGGA GAAGAGCAGC GGGAAGAGCC AGGAGAGAGA GCTGGCCACC 
CTGGACTGGG CAGAGCGGCA GCCGGCCCGA GGGGGTCTGG CCGAGGTGCT GCTGGCCGCC 
AGCGACCGCC AGCAGCCCCG GGAGACGCGG GTGATCGCTG TGCTGGGCAA AGCGGGACAT 
GGGAAGAGTC ACTGGGCCCG GGCCGTGAGC CGGGCCTGGG CCCACGGCCA GCTGCCACAG 
TACGACTTTG TCTTCTGTGT CCCCTGCCAT CGTTTGGACC GTCCGGGGAC CTCCTACCGC 
CTGCAGGATC TGCTGTCCTC CCTGGGCCCG CAGCCGTTGC CAGTGGACGA CGAGGTCCTC 
AGTTACATTG CGAGGAGACC CAACCGCATC CTGCTCATCC TGGATGGCTT CGAGGACCTG 
GAAGCCCACG ATGGCTCCCT GCACAGCACA GGAGGCCCCG GGTCGGCAGA GCCCCGCTCC 
CTCCGGGGGC TGCTGGCGGG CCTCCTCCAG CGCAAGCTGC TGCGGGGCTG CACCCTGCTG 
CTCACGGCCT GGCCCCGGGG CCGCCTGGCC CAGAGCCTGA GCAAGGTGGA CGCCCTGTTT 
GAGGTGGCCG GCTTCTCGGC CCAGCAGGTT GAGACCTATG TGAGGCGTTA CTTTGAGTCG 
GAGGGGACCG CTGAGCACCA AGAGAGAGCC CTGGCGCTCC TGCAGGCCCG GCCGTTCCTC 
CTGAGCCACA GCCACAGCCC CACCGTGTGC CGGACCGTGT GCCAGCTCGC AGAGGCCCTC 
CTGCAGCGGA GTGATGAAGC CCAGCTGCCC TCCACGCTCA CGGGCCTCTA CGTGGGCCTG 
CTAGGCCCAG CAGCTCGAGA TAGCCCCCCA GGGGCCCTGG CGGAACTGGC CAGGCTGGCC 
TGGGAGCTGG GCCGTGTGCA CCAGAGGGGC CTGAAGGCGG GCTGTTTACC GTCGGCGGAG 
GCGAGGGCCT GGGCTGTGGC CCAAGGCTGG TTGCGGCCCA CCCCGGGGGC CCCAGAGACG 
GAGCTGGCCT TCTCCAGCTT CCTCCTGCAG TGCTTCCTGG GGGCTGTGTG GCTGGCTCTG 
AGCGGCGAAA TCAAGGACAA GGAGCTGCCG CAGTATCTGG CCTTGACCCC GAGGAAGAAG 
CGGCCCTATG ACAACTGGCT GGAGGGCGTG CCGCGCTTCT TGGTCGGACT GGTCTTCCAG 
CCTCGCGCCG GCTGCCTGGG GGCCCTGGCA GGGCCGGCGG CCACCACGTC AGCGGACAGG 
AAGCAGAAGG TGCTCACGAG GTACCTGAAG CGTCTGCAGC CCGGGACGCT GCAGGCGGGG 
CGGCTGCTGG AGCTGCTGCA CTGTGCCCAC GAGGCGCTGG ACCCCGGGCT CTGGCAGCAC 
GTGCTGCAGG GGCTCCCTGC CCGCCTCTCC TTCCTGGGCA CACGGCTCAC GCCTCCTGAC 
ACCCATGTGC TGGGCAGCGC CCTGGAGGCC GCGGGCCGAG ACTTTTCCCT GGACCTCCGC 
AGCACTGGCG TCGACGCCTC TGGACTGGGG AGCCTCGTGG GACTCAGCTG TGTCACCCGT 
TTCAGGGCTG CATTGAGTGA CACTGTGGAG CTATGGGAGT CCCTGCAGCA GCGTGGGGAG 
GCCAAGCTAC TCCGGGCAGT GGAGGAGAAG TTCACCATCG AGCCTTTCAA GGCCAAGTCC 
ATGAAGGATG TGGAAGACCT TGGCAATCTC GTGCAGATCC AGAGGACAAG AAGCTCCTCT 
GAAGCAGCAG CTGGGGAGCT CCCTGCTGTC CGAGACTTAA AGAAGCTGGA GTTTGCGCTG 
GGCCCTGTCT TGGGCCCACA GGTTTTTCCT AAACTGGTGA AGATCCTTGA GGCCTTTACT 
TCCCTTCAGC ATCTAGACCT GGACTCGCTG AGCGAGAACA AGATTGGGGA CGAGGGTGTC 
GCCCAGCTCT CAGCCACCTT CCCTCAGCTG AAGGCCCTGG AGACACTCAA CTTGTCCCAG 
AACAACATCA CCGACGTGGG TGCCTGCAAG CTGGCCGAGG CTCTGCCCGC GCTGGCCACG 
TCCCTCCTCA GGTTGAGCTT GTACAATAAC TGTATCTGCG ACGCGGGAGC CGAGAGCCTG 
GCGCACGCGC TTCCAGACAT GGTGTCCCTC CGGGTGCTGG ACGTCCAGTA CAACAAGTTC 
ACAGCCGCTG GGGCTCAGCA GCTTGCCGCT GGCCTGAGAA AGTGCCCTCA GGTGAAGACA 
CTGGCGATGT GGACGCCCAC CATCCCCTTT GGCGTCCAGG AACACCTGCA GCAGCTGGAC 
CCACGAATCA TTCTGAGATG A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

CIITA ( XM_010819255.3 ) cDNA ORF clone, Bos taurus(cattle) -> XP_010817557.1 Bos taurus class II major histocompatibility complex transactivator (CIITA), transcript variant X1, mRNA.

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CloneID	OBa47246
Clone ID Related Accession (Same CDS sequence)	XM_010819255.2 , XM_015469297.1 , XM_010819255.3
Accession Version	XM_010819255.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3621bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2018-05-06
Organism	Bos taurus(cattle)
Product	MHC class II transactivator isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037352.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 7, 2018 this sequence version replaced XM_010819255.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGAATCACT TCCAGACCAT CCTGTCTCAG GTCCGGATGT TGCTCTCTAG CCATCGGCCG 
AGCCAAGTGC AGGCGCTTCT GGACAACCTG CTGGCGGAAG AGCTCCTCTC CAGGGAGTAC 
CACCATGCCC TGCTCCATGA GTCTGATGGT GAGGCTCTGG CCAGGAAGAT CTCCTTGACC 
CTGCTGGAGA AAGGAGACCC AGACTTCGCC CTCTTGGGGT GGATCTGGAG TGGGCTGCAG 
GCCCCCACAG CAGAGAGGGG CCCCAGCTAC AAGGACCCTG GTGGCAGTGG ACAGTGCCCA 
ACCATGGAGC TGGGGCCTCT AGAAGGCAGT TACTTAGAAC TTCTCAACAG CAGTGCTGAC 
CCTTTGCAGC TCTACCACCT CTACGACCGG ATGGATCTGA CAGGAGAAGA AGAAATAGAG 
CTCTGCTCAG AGCCTGACAC AGACACCATC AACTGCGAAC AGTTCAGCAG GCTGTTGTGT 
GACATGGAAG GTGATGAAGA GACCAGGGAA GCTTATGCCA ATATCGCGGA ATTGGACCAG 
TACGTCTTCC AGGACACCCA GCTGGAGGGC CTGAGCAAAG ACATTTTCAT CGAGCACATA 
GGATTGGAAG AAATGATCAG CGAGAGCGTG GAATTGCTGG AGGAGGCAGG GCAGAAAAGT 
CAGAAGAGAC CCTTCCCAGA GGAGCTGCCT GTGGATCTGA AGCACCGGAA GCTAGCCGAG 
CCCCTCACCA TGCCCGTGGT GACTGGCACT TTCCTGGTGG GGCCAGTGAG CGACTCCTTG 
GTTCAGCCTT GCCCGCCACC TCCTGCTCTG TTCAACACGG AGCCAGCATC CAGCCAGACC 
CGGCTGAAGG ACGCAGCGCC TCCGTCCAGT TCCTTGTTGA GCTGCCTGAG TCTTCCCGCG 
GGACCCATTC AGATTATCCC CACTCTCCCC ACTCTGCCCC AGGGGCTGTG GCCGATCTCA 
GGGACTGGGA CGGGGGTCTC CAGTATACTC ATCTACCAAA GTGAGATGCC CCCGGCCAGC 
CAAACACCCC CATCCAGCGG GCCTGCTGTC CAGAGCCTTC CCAAGTCCCC AGACCGGCCT 
GGCTCTGCCA GCCCCTTTGC CCCGTCTGCC GCTGACCTCC CCAGCATGCC CGAACCGGCC 
CTCACCTCCC GTGCAGGCCT GACAGAGGAT GAGATGTCCC CCACCAAATG CCCAGCAGCT 
GGCGGGGCCT CCAGCAAACT TCCCAAGTGG CCTGAGAGCG TGGAGCAGTT CTACCAGTCG 
CTACGGGACA AGTACCAGGC CCAGCCCACC GGCCCGGAAG GCACCCTGGT GGACATGGAC 
CTGGTGAGGG TGAGGCTGGA GAAGAGCAGC GGGAAGAGCC AGGAGAGAGA GCTGGCCACC 
CTGGACTGGG CAGAGCGGCA GCCGGCCCGA GGGGGTCTGG CCGAGGTGCT GCTGGCCGCC 
AGCGACCGCC AGCAGCCCCG GGAGACGCGG GTGATCGCTG TGCTGGGCAA AGCGGGACAT 
GGGAAGAGTC ACTGGGCCCG GGCCGTGAGC CGGGCCTGGG CCCACGGCCA GCTGCCACAG 
TACGACTTTG TCTTCTGTGT CCCCTGCCAT CGTTTGGACC GTCCGGGGAC CTCCTACCGC 
CTGCAGGATC TGCTGTCCTC CCTGGGCCCG CAGCCGTTGC CAGTGGACGA CGAGGTCCTC 
AGTTACATTG CGAGGAGACC CAACCGCATC CTGCTCATCC TGGATGGCTT CGAGGACCTG 
GAAGCCCACG ATGGCTCCCT GCACAGCACA GGAGGCCCCG GGTCGGCAGA GCCCCGCTCC 
CTCCGGGGGC TGCTGGCGGG CCTCCTCCAG CGCAAGCTGC TGCGGGGCTG CACCCTGCTG 
CTCACGGCCT GGCCCCGGGG CCGCCTGGCC CAGAGCCTGA GCAAGGTGGA CGCCCTGTTT 
GAGGTGGCCG GCTTCTCGGC CCAGCAGGTT GAGACCTATG TGAGGCGTTA CTTTGAGTCG 
GAGGGGACCG CTGAGCACCA AGAGAGAGCC CTGGCGCTCC TGCAGGCCCG GCCGTTCCTC 
CTGAGCCACA GCCACAGCCC CACCGTGTGC CGGACCGTGT GCCAGCTCGC AGAGGCCCTC 
CTGCAGCGGA GTGATGAAGC CCAGCTGCCC TCCACGCTCA CGGGCCTCTA CGTGGGCCTG 
CTAGGCCCAG CAGCTCGAGA TAGCCCCCCA GGGGCCCTGG CGGAACTGGC CAGGCTGGCC 
TGGGAGCTGG GCCGTGTGCA CCAGAGGGGC CTGAAGGCGG GCTGTTTACC GTCGGCGGAG 
GCGAGGGCCT GGGCTGTGGC CCAAGGCTGG TTGCGGCCCA CCCCGGGGGC CCCAGAGACG 
GAGCTGGCCT TCTCCAGCTT CCTCCTGCAG TGCTTCCTGG GGGCTGTGTG GCTGGCTCTG 
AGCGGCGAAA TCAAGGACAA GGAGCTGCCG CAGTATCTGG CCTTGACCCC GAGGAAGAAG 
CGGCCCTATG ACAACTGGCT GGAGGGCGTG CCGCGCTTCT TGGTCGGACT GGTCTTCCAG 
CCTCGCGCCG GCTGCCTGGG GGCCCTGGCA GGGCCGGCGG CCACCACGTC AGCGGACAGG 
AAGCAGAAGG TGCTCACGAG GTACCTGAAG CGTCTGCAGC CCGGGACGCT GCAGGCGGGG 
CGGCTGCTGG AGCTGCTGCA CTGTGCCCAC GAGGCGCTGG ACCCCGGGCT CTGGCAGCAC 
GTGCTGCAGG GGCTCCCTGC CCGCCTCTCC TTCCTGGGCA CACGGCTCAC GCCTCCTGAC 
ACCCATGTGC TGGGCAGCGC CCTGGAGGCC GCGGGCCGAG ACTTTTCCCT GGACCTCCGC 
AGCACTGGCG TCGACGCCTC TGGACTGGGG AGCCTCGTGG GACTCAGCTG TGTCACCCGT 
TTCAGGGCTG CATTGAGTGA CACTGTGGAG CTATGGGAGT CCCTGCAGCA GCGTGGGGAG 
GCCAAGCTAC TCCGGGCAGT GGAGGAGAAG TTCACCATCG AGCCTTTCAA GGCCAAGTCC 
ATGAAGGATG TGGAAGACCT TGGCAATCTC GTGCAGATCC AGAGGACAAG AAGCTCCTCT 
GAAGCAGCAG CTGGGGAGCT CCCTGCTGTC CGAGACTTAA AGAAGCTGGA GTTTGCGCTG 
GGCCCTGTCT TGGGCCCACA GGTTTTTCCT AAACTGGTGA AGATCCTTGA GGCCTTTACT 
TCCCTTCAGC ATCTAGACCT GGACTCGCTG AGCGAGAACA AGATTGGGGA CGAGGGTGTC 
GCCCAGCTCT CAGCCACCTT CCCTCAGCTG AAGGCCCTGG AGACACTCAA CTTGTCCCAG 
AACAACATCA CCGACGTGGG TGCCTGCAAG CTGGCCGAGG CTCTGCCCGC GCTGGCCACG 
TCCCTCCTCA GGTTGAGCTT GTACAATAAC TGTATCTGCG ACGCGGGAGC CGAGAGCCTG 
GCGCACGCGC TTCCAGACAT GGTGTCCCTC CGGGTGCTGG ACGTCCAGTA CAACAAGTTC 
ACAGCCGCTG GGGCTCAGCA GCTTGCCGCT GGCCTGAGAA AGTGCCCTCA GGTGAAGACA 
CTGGCGATGT GGACGCCCAC CATCCCCTTT GGCGTCCAGG AACACCTGCA GCAGCTGGAC 
CCACGAATCA TTCTGAGATG A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_010817557.1
CDS	277..3897
Translation	MNHFQTILSQVRMLLSSHRPSQVQALLDNLLAEELLSREYHHALLHESDGEALARKISLTLLEKGDPDFALLGWIWSGLQAPTAERGPSYKDPGGSGQCPTMELGPLEGSYLELLNSSADPLQLYHLYDRMDLTGEEEIELCSEPDTDTINCEQFSRLLCDMEGDEETREAYANIAELDQYVFQDTQLEGLSKDIFIEHIGLEEMISESVELLEEAGQKSQKRPFPEELPVDLKHRKLAEPLTMPVVTGTFLVGPVSDSLVQPCPPPPALFNTEPASSQTRLKDAAPPSSSLLSCLSLPAGPIQIIPTLPTLPQGLWPISGTGTGVSSILIYQSEMPPASQTPPSSGPAVQSLPKSPDRPGSASPFAPSAADLPSMPEPALTSRAGLTEDEMSPTKCPAAGGASSKLPKWPESVEQFYQSLRDKYQAQPTGPEGTLVDMDLVRVRLEKSSGKSQERELATLDWAERQPARGGLAEVLLAASDRQQPRETRVIAVLGKAGHGKSHWARAVSRAWAHGQLPQYDFVFCVPCHRLDRPGTSYRLQDLLSSLGPQPLPVDDEVLSYIARRPNRILLILDGFEDLEAHDGSLHSTGGPGSAEPRSLRGLLAGLLQRKLLRGCTLLLTAWPRGRLAQSLSKVDALFEVAGFSAQQVETYVRRYFESEGTAEHQERALALLQARPFLLSHSHSPTVCRTVCQLAEALLQRSDEAQLPSTLTGLYVGLLGPAARDSPPGALAELARLAWELGRVHQRGLKAGCLPSAEARAWAVAQGWLRPTPGAPETELAFSSFLLQCFLGAVWLALSGEIKDKELPQYLALTPRKKRPYDNWLEGVPRFLVGLVFQPRAGCLGALAGPAATTSADRKQKVLTRYLKRLQPGTLQAGRLLELLHCAHEALDPGLWQHVLQGLPARLSFLGTRLTPPDTHVLGSALEAAGRDFSLDLRSTGVDASGLGSLVGLSCVTRFRAALSDTVELWESLQQRGEAKLLRAVEEKFTIEPFKAKSMKDVEDLGNLVQIQRTRSSSEAAAGELPAVRDLKKLEFALGPVLGPQVFPKLVKILEAFTSLQHLDLDSLSENKIGDEGVAQLSATFPQLKALETLNLSQNNITDVGACKLAEALPALATSLLRLSLYNNCICDAGAESLAHALPDMVSLRVLDVQYNKFTAAGAQQLAAGLRKCPQVKTLAMWTPTIPFGVQEHLQQLDPRIILR

Target ORF information:

RefSeq Version	XM_010819255.3
Organism	Bos taurus(cattle)
Definition	Bos taurus class II major histocompatibility complex transactivator (CIITA), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_010819255.3

ORF Insert Sequence:

ATGAATCACT TCCAGACCAT CCTGTCTCAG GTCCGGATGT TGCTCTCTAG CCATCGGCCG 
AGCCAAGTGC AGGCGCTTCT GGACAACCTG CTGGCGGAAG AGCTCCTCTC CAGGGAGTAC 
CACCATGCCC TGCTCCATGA GTCTGATGGT GAGGCTCTGG CCAGGAAGAT CTCCTTGACC 
CTGCTGGAGA AAGGAGACCC AGACTTCGCC CTCTTGGGGT GGATCTGGAG TGGGCTGCAG 
GCCCCCACAG CAGAGAGGGG CCCCAGCTAC AAGGACCCTG GTGGCAGTGG ACAGTGCCCA 
ACCATGGAGC TGGGGCCTCT AGAAGGCAGT TACTTAGAAC TTCTCAACAG CAGTGCTGAC 
CCTTTGCAGC TCTACCACCT CTACGACCGG ATGGATCTGA CAGGAGAAGA AGAAATAGAG 
CTCTGCTCAG AGCCTGACAC AGACACCATC AACTGCGAAC AGTTCAGCAG GCTGTTGTGT 
GACATGGAAG GTGATGAAGA GACCAGGGAA GCTTATGCCA ATATCGCGGA ATTGGACCAG 
TACGTCTTCC AGGACACCCA GCTGGAGGGC CTGAGCAAAG ACATTTTCAT CGAGCACATA 
GGATTGGAAG AAATGATCAG CGAGAGCGTG GAATTGCTGG AGGAGGCAGG GCAGAAAAGT 
CAGAAGAGAC CCTTCCCAGA GGAGCTGCCT GTGGATCTGA AGCACCGGAA GCTAGCCGAG 
CCCCTCACCA TGCCCGTGGT GACTGGCACT TTCCTGGTGG GGCCAGTGAG CGACTCCTTG 
GTTCAGCCTT GCCCGCCACC TCCTGCTCTG TTCAACACGG AGCCAGCATC CAGCCAGACC 
CGGCTGAAGG ACGCAGCGCC TCCGTCCAGT TCCTTGTTGA GCTGCCTGAG TCTTCCCGCG 
GGACCCATTC AGATTATCCC CACTCTCCCC ACTCTGCCCC AGGGGCTGTG GCCGATCTCA 
GGGACTGGGA CGGGGGTCTC CAGTATACTC ATCTACCAAA GTGAGATGCC CCCGGCCAGC 
CAAACACCCC CATCCAGCGG GCCTGCTGTC CAGAGCCTTC CCAAGTCCCC AGACCGGCCT 
GGCTCTGCCA GCCCCTTTGC CCCGTCTGCC GCTGACCTCC CCAGCATGCC CGAACCGGCC 
CTCACCTCCC GTGCAGGCCT GACAGAGGAT GAGATGTCCC CCACCAAATG CCCAGCAGCT 
GGCGGGGCCT CCAGCAAACT TCCCAAGTGG CCTGAGAGCG TGGAGCAGTT CTACCAGTCG 
CTACGGGACA AGTACCAGGC CCAGCCCACC GGCCCGGAAG GCACCCTGGT GGACATGGAC 
CTGGTGAGGG TGAGGCTGGA GAAGAGCAGC GGGAAGAGCC AGGAGAGAGA GCTGGCCACC 
CTGGACTGGG CAGAGCGGCA GCCGGCCCGA GGGGGTCTGG CCGAGGTGCT GCTGGCCGCC 
AGCGACCGCC AGCAGCCCCG GGAGACGCGG GTGATCGCTG TGCTGGGCAA AGCGGGACAT 
GGGAAGAGTC ACTGGGCCCG GGCCGTGAGC CGGGCCTGGG CCCACGGCCA GCTGCCACAG 
TACGACTTTG TCTTCTGTGT CCCCTGCCAT CGTTTGGACC GTCCGGGGAC CTCCTACCGC 
CTGCAGGATC TGCTGTCCTC CCTGGGCCCG CAGCCGTTGC CAGTGGACGA CGAGGTCCTC 
AGTTACATTG CGAGGAGACC CAACCGCATC CTGCTCATCC TGGATGGCTT CGAGGACCTG 
GAAGCCCACG ATGGCTCCCT GCACAGCACA GGAGGCCCCG GGTCGGCAGA GCCCCGCTCC 
CTCCGGGGGC TGCTGGCGGG CCTCCTCCAG CGCAAGCTGC TGCGGGGCTG CACCCTGCTG 
CTCACGGCCT GGCCCCGGGG CCGCCTGGCC CAGAGCCTGA GCAAGGTGGA CGCCCTGTTT 
GAGGTGGCCG GCTTCTCGGC CCAGCAGGTT GAGACCTATG TGAGGCGTTA CTTTGAGTCG 
GAGGGGACCG CTGAGCACCA AGAGAGAGCC CTGGCGCTCC TGCAGGCCCG GCCGTTCCTC 
CTGAGCCACA GCCACAGCCC CACCGTGTGC CGGACCGTGT GCCAGCTCGC AGAGGCCCTC 
CTGCAGCGGA GTGATGAAGC CCAGCTGCCC TCCACGCTCA CGGGCCTCTA CGTGGGCCTG 
CTAGGCCCAG CAGCTCGAGA TAGCCCCCCA GGGGCCCTGG CGGAACTGGC CAGGCTGGCC 
TGGGAGCTGG GCCGTGTGCA CCAGAGGGGC CTGAAGGCGG GCTGTTTACC GTCGGCGGAG 
GCGAGGGCCT GGGCTGTGGC CCAAGGCTGG TTGCGGCCCA CCCCGGGGGC CCCAGAGACG 
GAGCTGGCCT TCTCCAGCTT CCTCCTGCAG TGCTTCCTGG GGGCTGTGTG GCTGGCTCTG 
AGCGGCGAAA TCAAGGACAA GGAGCTGCCG CAGTATCTGG CCTTGACCCC GAGGAAGAAG 
CGGCCCTATG ACAACTGGCT GGAGGGCGTG CCGCGCTTCT TGGTCGGACT GGTCTTCCAG 
CCTCGCGCCG GCTGCCTGGG GGCCCTGGCA GGGCCGGCGG CCACCACGTC AGCGGACAGG 
AAGCAGAAGG TGCTCACGAG GTACCTGAAG CGTCTGCAGC CCGGGACGCT GCAGGCGGGG 
CGGCTGCTGG AGCTGCTGCA CTGTGCCCAC GAGGCGCTGG ACCCCGGGCT CTGGCAGCAC 
GTGCTGCAGG GGCTCCCTGC CCGCCTCTCC TTCCTGGGCA CACGGCTCAC GCCTCCTGAC 
ACCCATGTGC TGGGCAGCGC CCTGGAGGCC GCGGGCCGAG ACTTTTCCCT GGACCTCCGC 
AGCACTGGCG TCGACGCCTC TGGACTGGGG AGCCTCGTGG GACTCAGCTG TGTCACCCGT 
TTCAGGGCTG CATTGAGTGA CACTGTGGAG CTATGGGAGT CCCTGCAGCA GCGTGGGGAG 
GCCAAGCTAC TCCGGGCAGT GGAGGAGAAG TTCACCATCG AGCCTTTCAA GGCCAAGTCC 
ATGAAGGATG TGGAAGACCT TGGCAATCTC GTGCAGATCC AGAGGACAAG AAGCTCCTCT 
GAAGCAGCAG CTGGGGAGCT CCCTGCTGTC CGAGACTTAA AGAAGCTGGA GTTTGCGCTG 
GGCCCTGTCT TGGGCCCACA GGTTTTTCCT AAACTGGTGA AGATCCTTGA GGCCTTTACT 
TCCCTTCAGC ATCTAGACCT GGACTCGCTG AGCGAGAACA AGATTGGGGA CGAGGGTGTC 
GCCCAGCTCT CAGCCACCTT CCCTCAGCTG AAGGCCCTGG AGACACTCAA CTTGTCCCAG 
AACAACATCA CCGACGTGGG TGCCTGCAAG CTGGCCGAGG CTCTGCCCGC GCTGGCCACG 
TCCCTCCTCA GGTTGAGCTT GTACAATAAC TGTATCTGCG ACGCGGGAGC CGAGAGCCTG 
GCGCACGCGC TTCCAGACAT GGTGTCCCTC CGGGTGCTGG ACGTCCAGTA CAACAAGTTC 
ACAGCCGCTG GGGCTCAGCA GCTTGCCGCT GGCCTGAGAA AGTGCCCTCA GGTGAAGACA 
CTGGCGATGT GGACGCCCAC CATCCCCTTT GGCGTCCAGG AACACCTGCA GCAGCTGGAC 
CCACGAATCA TTCTGAGATG A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

CIITA ( XM_015469299.1 ) cDNA ORF clone, Bos taurus(cattle) -> XP_015324785.1 Bos taurus class II, major histocompatibility complex, transactivator (CIITA), transcript variant X3, mRNA.

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CloneID	OBa47247
Clone ID Related Accession (Same CDS sequence)	XM_015469299.1 , XM_010819256.3 , XM_010819256.2
Accession Version	XM_015469299.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3453bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-01-25
Organism	Bos taurus(cattle)
Product	MHC class II transactivator isoform X3
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_014646645.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bos taurus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGAATCACT TCCAGACCAT CCTGTCTCAG GTCCGGATGT TGCTCTCTAG CCATCGGCCG 
AGCCAAGTGC AGGCGCTTCT GGACAACCTG CTGGCGGAAG AGCTCCTCTC CAGGGAGTAC 
CACCATGCCC TGCTCCATGA GTCTGATGGT GAGGCTCTGG CCAGGAAGAT CTCCTTGACC 
CTGCTGGAGA AAGGAGACCC AGACTTCGCC CTCTTGGGGT GGATCTGGAG TGGGCTGCAG 
GCCCCCACAG CAGAGAGGGG CCCCAGCTAC AAGGACCCTG GTGGCAGTGG ACAGTGCCCA 
ACCATGGAGC TGGGGCCTCT AGAAGGCAGT TACTTAGAAC TTCTCAACAG CAGTGCTGAC 
CCTTTGCAGC TCTACCACCT CTACGACCGG ATGGATCTGA CAGGAGAAGA AGAAATAGAG 
CTCTGCTCAG AGCCTGACAC AGACACCATC AACTGCGAAC AGTTCAGCAG GCTGTTGTGT 
GACATGGAAG GTGATGAAGA GACCAGGGAA GCTTATGCCA ATATCGCGGA ATTGGACCAG 
TACGTCTTCC AGGACACCCA GCTGGAGGGC CTGAGCAAAG ACATTTTCAT CGAGCACATA 
GGATTGGAAG AAATGATCAG CGAGAGCGTG GAATTGCTGG AGGAGGCAGG GCAGAAAAGT 
CAGAAGAGAC CCTTCCCAGA GGAGCTGCCT GTGGATCTGA AGCACCGGAA GCTAGCCGAG 
CCCCTCACCA TGCCCGTGGT GACTGGCACT TTCCTGGTGG GGCCAGTGAG CGACTCCTTG 
GTTCAGCCTT GCCCGCCACC TCCTGCTCTG TTCAACACGG AGCCAGCATC CAGCCAGACC 
CGGCTGAAGG ACGCAGCGCC TCCGTCCAGT TCCTTGTTGA GCTGCCTGAG TCTTCCCGCG 
GGACCCATTC AGATTATCCC CACTCTCCCC ACTCTGCCCC AGGGGCTGTG GCCGATCTCA 
GGGACTGGGA CGGGGGTCTC CAGTATACTC ATCTACCAAA GTGAGATGCC CCCGGCCAGC 
CAAACACCCC CATCCAGCGG GCCTGCTGTC CAGAGCCTTC CCAAGTCCCC AGACCGGCCT 
GGCTCTGCCA GCCCCTTTGC CCCGTCTGCC GCTGACCTCC CCAGCATGCC CGAACCGGCC 
CTCACCTCCC GTGCAGGCCT GACAGAGGAT GAGATGTCCC CCACCAAATG CCCAGCAGCT 
GGCGGGGCCT CCAGCAAACT TCCCAAGTGG CCTGAGAGCG TGGAGCAGTT CTACCAGTCG 
CTACGGGACA AGTACCAGGC CCAGCCCACC GGCCCGGAAG GCACCCTGGT GGACATGGAC 
CTGGTGAGGG TGAGGCTGGA GAAGAGCAGC GGGAAGAGCC AGGAGAGAGA GCTGGCCACC 
CTGGACTGGG CAGAGCGGCA GCCGGCCCGA GGGGGTCTGG CCGAGGTGCT GCTGGCCGCC 
AGCGACCGCC AGCAGCCCCG GGAGACGCGG GTGATCGCTG TGCTGGGCAA AGCGGGACAT 
GGGAAGAGTC ACTGGGCCCG GGCCGTGAGC CGGGCCTGGG CCCACGGCCA GCTGCCACAG 
TACGACTTTG TCTTCTGTGT CCCCTGCCAT CGTTTGGACC GTCCGGGGAC CTCCTACCGC 
CTGCAGGATC TGCTGTCCTC CCTGGGCCCG CAGCCGTTGC CAGTGGACGA CGAGGTCCTC 
AGTTACATTG CGAGGAGACC CAACCGCATC CTGCTCATCC TGGATGGCTT CGAGGACCTG 
GAAGCCCACG ATGGCTCCCT GCACAGCACA GGAGGCCCCG GGTCGGCAGA GCCCCGCTCC 
CTCCGGGGGC TGCTGGCGGG CCTCCTCCAG CGCAAGCTGC TGCGGGGCTG CACCCTGCTG 
CTCACGGCCT GGCCCCGGGG CCGCCTGGCC CAGAGCCTGA GCAAGGTGGA CGCCCTGTTT 
GAGGTGGCCG GCTTCTCGGC CCAGCAGGTT GAGACCTATG TGAGGCGTTA CTTTGAGTCG 
GAGGGGACCG CTGAGCACCA AGAGAGAGCC CTGGCGCTCC TGCAGGCCCG GCCGTTCCTC 
CTGAGCCACA GCCACAGCCC CACCGTGTGC CGGACCGTGT GCCAGCTCGC AGAGGCCCTC 
CTGCAGCGGA GTGATGAAGC CCAGCTGCCC TCCACGCTCA CGGGCCTCTA CGTGGGCCTG 
CTAGGCCCAG CAGCTCGAGA TAGCCCCCCA GGGGCCCTGG CGGAACTGGC CAGGCTGGCC 
TGGGAGCTGG GCCGTGTGCA CCAGAGGGGC CTGAAGGCGG GCTGTTTACC GTCGGCGGAG 
GCGAGGGCCT GGGCTGTGGC CCAAGGCTGG TTGCGGCCCA CCCCGGGGGC CCCAGAGACG 
GAGCTGGCCT TCTCCAGCTT CCTCCTGCAG TGCTTCCTGG GGGCTGTGTG GCTGGCTCTG 
AGCGGCGAAA TCAAGGACAA GGAGCTGCCG CAGTATCTGG CCTTGACCCC GAGGAAGAAG 
CGGCCCTATG ACAACTGGCT GGAGGGCGTG CCGCGCTTCT TGGTCGGACT GGTCTTCCAG 
CCTCGCGCCG GCTGCCTGGG GGCCCTGGCA GGGCCGGCGG CCACCACGTC AGCGGACAGG 
AAGCAGAAGG TGCTCACGAG GTACCTGAAG CGTCTGCAGC CCGGGACGCT GCAGGCGGGG 
CGGCTGCTGG AGCTGCTGCA CTGTGCCCAC GAGGCGCTGG ACCCCGGGCT CTGGCAGCAC 
GTGCTGCAGG GGCTCCCTGC CCGCCTCTCC TTCCTGGGCA CACGGCTCAC GCCTCCTGAC 
ACCCATGTGC TGGGCAGCGC CCTGGAGGCC GCGGGCCGAG ACTTTTCCCT GGACCTCCGC 
AGCACTGGCG TCGACGCCTC TGGACTGGGG AGCCTCGTGG GACTCAGCTG TGTCACCCGT 
TTCAGGGCTG CATTGAGTGA CACTGTGGAG CTATGGGAGT CCCTGCAGCA GCGTGGGGAG 
GCCAAGCTAC TCCGGGCAGT GGAGGAGAAG TTCACCATCG AGCCTTTCAA GGCCAAGTCC 
ATGAAGGATG TGGAAGACCT TGGCAATCTC GTGCAGATCC AGAGGACAAG AAGCTCCTCT 
GAAGCAGCAG CTGGGGAGCT CCCTGCTGTC CGAGACTTAA AGAAGCTGGA GTTTGCGCTG 
GGCCCTGTCT TGGGCCCACA GGTTTTTCCT AAACTGGTGA AGATCCTTGA GGCCTTTACT 
TCCCTTCAGC ATCTAGACCT GGACTCGCTG AGCGAGAACA AGATTGGGGA CGAGGGTGTC 
GCCCAGCTCT CAGCCACCTT CCCTCAGCTG AAGGCCCTGG AGACACTCAA CTTGTCCCAG 
AACAACATCA CCGACGTGGG TGCCTGCAAG CTGGCCGAGG CTCTGCCCGC GCTGGCCACG 
TCCCTCCTCA GGTTGAGGAT GTGGACGCCC ACCATCCCCT TTGGCGTCCA GGAACACCTG 
CAGCAGCTGG ACCCACGAAT CATTCTGAGA TGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_015324785.1
CDS	266..3718
Translation	MNHFQTILSQVRMLLSSHRPSQVQALLDNLLAEELLSREYHHALLHESDGEALARKISLTLLEKGDPDFALLGWIWSGLQAPTAERGPSYKDPGGSGQCPTMELGPLEGSYLELLNSSADPLQLYHLYDRMDLTGEEEIELCSEPDTDTINCEQFSRLLCDMEGDEETREAYANIAELDQYVFQDTQLEGLSKDIFIEHIGLEEMISESVELLEEAGQKSQKRPFPEELPVDLKHRKLAEPLTMPVVTGTFLVGPVSDSLVQPCPPPPALFNTEPASSQTRLKDAAPPSSSLLSCLSLPAGPIQIIPTLPTLPQGLWPISGTGTGVSSILIYQSEMPPASQTPPSSGPAVQSLPKSPDRPGSASPFAPSAADLPSMPEPALTSRAGLTEDEMSPTKCPAAGGASSKLPKWPESVEQFYQSLRDKYQAQPTGPEGTLVDMDLVRVRLEKSSGKSQERELATLDWAERQPARGGLAEVLLAASDRQQPRETRVIAVLGKAGHGKSHWARAVSRAWAHGQLPQYDFVFCVPCHRLDRPGTSYRLQDLLSSLGPQPLPVDDEVLSYIARRPNRILLILDGFEDLEAHDGSLHSTGGPGSAEPRSLRGLLAGLLQRKLLRGCTLLLTAWPRGRLAQSLSKVDALFEVAGFSAQQVETYVRRYFESEGTAEHQERALALLQARPFLLSHSHSPTVCRTVCQLAEALLQRSDEAQLPSTLTGLYVGLLGPAARDSPPGALAELARLAWELGRVHQRGLKAGCLPSAEARAWAVAQGWLRPTPGAPETELAFSSFLLQCFLGAVWLALSGEIKDKELPQYLALTPRKKRPYDNWLEGVPRFLVGLVFQPRAGCLGALAGPAATTSADRKQKVLTRYLKRLQPGTLQAGRLLELLHCAHEALDPGLWQHVLQGLPARLSFLGTRLTPPDTHVLGSALEAAGRDFSLDLRSTGVDASGLGSLVGLSCVTRFRAALSDTVELWESLQQRGEAKLLRAVEEKFTIEPFKAKSMKDVEDLGNLVQIQRTRSSSEAAAGELPAVRDLKKLEFALGPVLGPQVFPKLVKILEAFTSLQHLDLDSLSENKIGDEGVAQLSATFPQLKALETLNLSQNNITDVGACKLAEALPALATSLLRLRMWTPTIPFGVQEHLQQLDPRIILR

Target ORF information:

RefSeq Version	XM_015469299.1
Organism	Bos taurus(cattle)
Definition	Bos taurus class II, major histocompatibility complex, transactivator (CIITA), transcript variant X3, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_015469299.1

ORF Insert Sequence:

ATGAATCACT TCCAGACCAT CCTGTCTCAG GTCCGGATGT TGCTCTCTAG CCATCGGCCG 
AGCCAAGTGC AGGCGCTTCT GGACAACCTG CTGGCGGAAG AGCTCCTCTC CAGGGAGTAC 
CACCATGCCC TGCTCCATGA GTCTGATGGT GAGGCTCTGG CCAGGAAGAT CTCCTTGACC 
CTGCTGGAGA AAGGAGACCC AGACTTCGCC CTCTTGGGGT GGATCTGGAG TGGGCTGCAG 
GCCCCCACAG CAGAGAGGGG CCCCAGCTAC AAGGACCCTG GTGGCAGTGG ACAGTGCCCA 
ACCATGGAGC TGGGGCCTCT AGAAGGCAGT TACTTAGAAC TTCTCAACAG CAGTGCTGAC 
CCTTTGCAGC TCTACCACCT CTACGACCGG ATGGATCTGA CAGGAGAAGA AGAAATAGAG 
CTCTGCTCAG AGCCTGACAC AGACACCATC AACTGCGAAC AGTTCAGCAG GCTGTTGTGT 
GACATGGAAG GTGATGAAGA GACCAGGGAA GCTTATGCCA ATATCGCGGA ATTGGACCAG 
TACGTCTTCC AGGACACCCA GCTGGAGGGC CTGAGCAAAG ACATTTTCAT CGAGCACATA 
GGATTGGAAG AAATGATCAG CGAGAGCGTG GAATTGCTGG AGGAGGCAGG GCAGAAAAGT 
CAGAAGAGAC CCTTCCCAGA GGAGCTGCCT GTGGATCTGA AGCACCGGAA GCTAGCCGAG 
CCCCTCACCA TGCCCGTGGT GACTGGCACT TTCCTGGTGG GGCCAGTGAG CGACTCCTTG 
GTTCAGCCTT GCCCGCCACC TCCTGCTCTG TTCAACACGG AGCCAGCATC CAGCCAGACC 
CGGCTGAAGG ACGCAGCGCC TCCGTCCAGT TCCTTGTTGA GCTGCCTGAG TCTTCCCGCG 
GGACCCATTC AGATTATCCC CACTCTCCCC ACTCTGCCCC AGGGGCTGTG GCCGATCTCA 
GGGACTGGGA CGGGGGTCTC CAGTATACTC ATCTACCAAA GTGAGATGCC CCCGGCCAGC 
CAAACACCCC CATCCAGCGG GCCTGCTGTC CAGAGCCTTC CCAAGTCCCC AGACCGGCCT 
GGCTCTGCCA GCCCCTTTGC CCCGTCTGCC GCTGACCTCC CCAGCATGCC CGAACCGGCC 
CTCACCTCCC GTGCAGGCCT GACAGAGGAT GAGATGTCCC CCACCAAATG CCCAGCAGCT 
GGCGGGGCCT CCAGCAAACT TCCCAAGTGG CCTGAGAGCG TGGAGCAGTT CTACCAGTCG 
CTACGGGACA AGTACCAGGC CCAGCCCACC GGCCCGGAAG GCACCCTGGT GGACATGGAC 
CTGGTGAGGG TGAGGCTGGA GAAGAGCAGC GGGAAGAGCC AGGAGAGAGA GCTGGCCACC 
CTGGACTGGG CAGAGCGGCA GCCGGCCCGA GGGGGTCTGG CCGAGGTGCT GCTGGCCGCC 
AGCGACCGCC AGCAGCCCCG GGAGACGCGG GTGATCGCTG TGCTGGGCAA AGCGGGACAT 
GGGAAGAGTC ACTGGGCCCG GGCCGTGAGC CGGGCCTGGG CCCACGGCCA GCTGCCACAG 
TACGACTTTG TCTTCTGTGT CCCCTGCCAT CGTTTGGACC GTCCGGGGAC CTCCTACCGC 
CTGCAGGATC TGCTGTCCTC CCTGGGCCCG CAGCCGTTGC CAGTGGACGA CGAGGTCCTC 
AGTTACATTG CGAGGAGACC CAACCGCATC CTGCTCATCC TGGATGGCTT CGAGGACCTG 
GAAGCCCACG ATGGCTCCCT GCACAGCACA GGAGGCCCCG GGTCGGCAGA GCCCCGCTCC 
CTCCGGGGGC TGCTGGCGGG CCTCCTCCAG CGCAAGCTGC TGCGGGGCTG CACCCTGCTG 
CTCACGGCCT GGCCCCGGGG CCGCCTGGCC CAGAGCCTGA GCAAGGTGGA CGCCCTGTTT 
GAGGTGGCCG GCTTCTCGGC CCAGCAGGTT GAGACCTATG TGAGGCGTTA CTTTGAGTCG 
GAGGGGACCG CTGAGCACCA AGAGAGAGCC CTGGCGCTCC TGCAGGCCCG GCCGTTCCTC 
CTGAGCCACA GCCACAGCCC CACCGTGTGC CGGACCGTGT GCCAGCTCGC AGAGGCCCTC 
CTGCAGCGGA GTGATGAAGC CCAGCTGCCC TCCACGCTCA CGGGCCTCTA CGTGGGCCTG 
CTAGGCCCAG CAGCTCGAGA TAGCCCCCCA GGGGCCCTGG CGGAACTGGC CAGGCTGGCC 
TGGGAGCTGG GCCGTGTGCA CCAGAGGGGC CTGAAGGCGG GCTGTTTACC GTCGGCGGAG 
GCGAGGGCCT GGGCTGTGGC CCAAGGCTGG TTGCGGCCCA CCCCGGGGGC CCCAGAGACG 
GAGCTGGCCT TCTCCAGCTT CCTCCTGCAG TGCTTCCTGG GGGCTGTGTG GCTGGCTCTG 
AGCGGCGAAA TCAAGGACAA GGAGCTGCCG CAGTATCTGG CCTTGACCCC GAGGAAGAAG 
CGGCCCTATG ACAACTGGCT GGAGGGCGTG CCGCGCTTCT TGGTCGGACT GGTCTTCCAG 
CCTCGCGCCG GCTGCCTGGG GGCCCTGGCA GGGCCGGCGG CCACCACGTC AGCGGACAGG 
AAGCAGAAGG TGCTCACGAG GTACCTGAAG CGTCTGCAGC CCGGGACGCT GCAGGCGGGG 
CGGCTGCTGG AGCTGCTGCA CTGTGCCCAC GAGGCGCTGG ACCCCGGGCT CTGGCAGCAC 
GTGCTGCAGG GGCTCCCTGC CCGCCTCTCC TTCCTGGGCA CACGGCTCAC GCCTCCTGAC 
ACCCATGTGC TGGGCAGCGC CCTGGAGGCC GCGGGCCGAG ACTTTTCCCT GGACCTCCGC 
AGCACTGGCG TCGACGCCTC TGGACTGGGG AGCCTCGTGG GACTCAGCTG TGTCACCCGT 
TTCAGGGCTG CATTGAGTGA CACTGTGGAG CTATGGGAGT CCCTGCAGCA GCGTGGGGAG 
GCCAAGCTAC TCCGGGCAGT GGAGGAGAAG TTCACCATCG AGCCTTTCAA GGCCAAGTCC 
ATGAAGGATG TGGAAGACCT TGGCAATCTC GTGCAGATCC AGAGGACAAG AAGCTCCTCT 
GAAGCAGCAG CTGGGGAGCT CCCTGCTGTC CGAGACTTAA AGAAGCTGGA GTTTGCGCTG 
GGCCCTGTCT TGGGCCCACA GGTTTTTCCT AAACTGGTGA AGATCCTTGA GGCCTTTACT 
TCCCTTCAGC ATCTAGACCT GGACTCGCTG AGCGAGAACA AGATTGGGGA CGAGGGTGTC 
GCCCAGCTCT CAGCCACCTT CCCTCAGCTG AAGGCCCTGG AGACACTCAA CTTGTCCCAG 
AACAACATCA CCGACGTGGG TGCCTGCAAG CTGGCCGAGG CTCTGCCCGC GCTGGCCACG 
TCCCTCCTCA GGTTGAGGAT GTGGACGCCC ACCATCCCCT TTGGCGTCCA GGAACACCTG 
CAGCAGCTGG ACCCACGAAT CATTCTGAGA TGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

CIITA ( XM_010819256.3 ) cDNA ORF clone, Bos taurus(cattle) -> XP_010817558.1 Bos taurus class II major histocompatibility complex transactivator (CIITA), transcript variant X2, mRNA.

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CloneID	OBa47247
Clone ID Related Accession (Same CDS sequence)	XM_015469299.1 , XM_010819256.3 , XM_010819256.2
Accession Version	XM_010819256.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3453bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2018-05-06
Organism	Bos taurus(cattle)
Product	MHC class II transactivator isoform X2
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037352.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 7, 2018 this sequence version replaced XM_010819256.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGAATCACT TCCAGACCAT CCTGTCTCAG GTCCGGATGT TGCTCTCTAG CCATCGGCCG 
AGCCAAGTGC AGGCGCTTCT GGACAACCTG CTGGCGGAAG AGCTCCTCTC CAGGGAGTAC 
CACCATGCCC TGCTCCATGA GTCTGATGGT GAGGCTCTGG CCAGGAAGAT CTCCTTGACC 
CTGCTGGAGA AAGGAGACCC AGACTTCGCC CTCTTGGGGT GGATCTGGAG TGGGCTGCAG 
GCCCCCACAG CAGAGAGGGG CCCCAGCTAC AAGGACCCTG GTGGCAGTGG ACAGTGCCCA 
ACCATGGAGC TGGGGCCTCT AGAAGGCAGT TACTTAGAAC TTCTCAACAG CAGTGCTGAC 
CCTTTGCAGC TCTACCACCT CTACGACCGG ATGGATCTGA CAGGAGAAGA AGAAATAGAG 
CTCTGCTCAG AGCCTGACAC AGACACCATC AACTGCGAAC AGTTCAGCAG GCTGTTGTGT 
GACATGGAAG GTGATGAAGA GACCAGGGAA GCTTATGCCA ATATCGCGGA ATTGGACCAG 
TACGTCTTCC AGGACACCCA GCTGGAGGGC CTGAGCAAAG ACATTTTCAT CGAGCACATA 
GGATTGGAAG AAATGATCAG CGAGAGCGTG GAATTGCTGG AGGAGGCAGG GCAGAAAAGT 
CAGAAGAGAC CCTTCCCAGA GGAGCTGCCT GTGGATCTGA AGCACCGGAA GCTAGCCGAG 
CCCCTCACCA TGCCCGTGGT GACTGGCACT TTCCTGGTGG GGCCAGTGAG CGACTCCTTG 
GTTCAGCCTT GCCCGCCACC TCCTGCTCTG TTCAACACGG AGCCAGCATC CAGCCAGACC 
CGGCTGAAGG ACGCAGCGCC TCCGTCCAGT TCCTTGTTGA GCTGCCTGAG TCTTCCCGCG 
GGACCCATTC AGATTATCCC CACTCTCCCC ACTCTGCCCC AGGGGCTGTG GCCGATCTCA 
GGGACTGGGA CGGGGGTCTC CAGTATACTC ATCTACCAAA GTGAGATGCC CCCGGCCAGC 
CAAACACCCC CATCCAGCGG GCCTGCTGTC CAGAGCCTTC CCAAGTCCCC AGACCGGCCT 
GGCTCTGCCA GCCCCTTTGC CCCGTCTGCC GCTGACCTCC CCAGCATGCC CGAACCGGCC 
CTCACCTCCC GTGCAGGCCT GACAGAGGAT GAGATGTCCC CCACCAAATG CCCAGCAGCT 
GGCGGGGCCT CCAGCAAACT TCCCAAGTGG CCTGAGAGCG TGGAGCAGTT CTACCAGTCG 
CTACGGGACA AGTACCAGGC CCAGCCCACC GGCCCGGAAG GCACCCTGGT GGACATGGAC 
CTGGTGAGGG TGAGGCTGGA GAAGAGCAGC GGGAAGAGCC AGGAGAGAGA GCTGGCCACC 
CTGGACTGGG CAGAGCGGCA GCCGGCCCGA GGGGGTCTGG CCGAGGTGCT GCTGGCCGCC 
AGCGACCGCC AGCAGCCCCG GGAGACGCGG GTGATCGCTG TGCTGGGCAA AGCGGGACAT 
GGGAAGAGTC ACTGGGCCCG GGCCGTGAGC CGGGCCTGGG CCCACGGCCA GCTGCCACAG 
TACGACTTTG TCTTCTGTGT CCCCTGCCAT CGTTTGGACC GTCCGGGGAC CTCCTACCGC 
CTGCAGGATC TGCTGTCCTC CCTGGGCCCG CAGCCGTTGC CAGTGGACGA CGAGGTCCTC 
AGTTACATTG CGAGGAGACC CAACCGCATC CTGCTCATCC TGGATGGCTT CGAGGACCTG 
GAAGCCCACG ATGGCTCCCT GCACAGCACA GGAGGCCCCG GGTCGGCAGA GCCCCGCTCC 
CTCCGGGGGC TGCTGGCGGG CCTCCTCCAG CGCAAGCTGC TGCGGGGCTG CACCCTGCTG 
CTCACGGCCT GGCCCCGGGG CCGCCTGGCC CAGAGCCTGA GCAAGGTGGA CGCCCTGTTT 
GAGGTGGCCG GCTTCTCGGC CCAGCAGGTT GAGACCTATG TGAGGCGTTA CTTTGAGTCG 
GAGGGGACCG CTGAGCACCA AGAGAGAGCC CTGGCGCTCC TGCAGGCCCG GCCGTTCCTC 
CTGAGCCACA GCCACAGCCC CACCGTGTGC CGGACCGTGT GCCAGCTCGC AGAGGCCCTC 
CTGCAGCGGA GTGATGAAGC CCAGCTGCCC TCCACGCTCA CGGGCCTCTA CGTGGGCCTG 
CTAGGCCCAG CAGCTCGAGA TAGCCCCCCA GGGGCCCTGG CGGAACTGGC CAGGCTGGCC 
TGGGAGCTGG GCCGTGTGCA CCAGAGGGGC CTGAAGGCGG GCTGTTTACC GTCGGCGGAG 
GCGAGGGCCT GGGCTGTGGC CCAAGGCTGG TTGCGGCCCA CCCCGGGGGC CCCAGAGACG 
GAGCTGGCCT TCTCCAGCTT CCTCCTGCAG TGCTTCCTGG GGGCTGTGTG GCTGGCTCTG 
AGCGGCGAAA TCAAGGACAA GGAGCTGCCG CAGTATCTGG CCTTGACCCC GAGGAAGAAG 
CGGCCCTATG ACAACTGGCT GGAGGGCGTG CCGCGCTTCT TGGTCGGACT GGTCTTCCAG 
CCTCGCGCCG GCTGCCTGGG GGCCCTGGCA GGGCCGGCGG CCACCACGTC AGCGGACAGG 
AAGCAGAAGG TGCTCACGAG GTACCTGAAG CGTCTGCAGC CCGGGACGCT GCAGGCGGGG 
CGGCTGCTGG AGCTGCTGCA CTGTGCCCAC GAGGCGCTGG ACCCCGGGCT CTGGCAGCAC 
GTGCTGCAGG GGCTCCCTGC CCGCCTCTCC TTCCTGGGCA CACGGCTCAC GCCTCCTGAC 
ACCCATGTGC TGGGCAGCGC CCTGGAGGCC GCGGGCCGAG ACTTTTCCCT GGACCTCCGC 
AGCACTGGCG TCGACGCCTC TGGACTGGGG AGCCTCGTGG GACTCAGCTG TGTCACCCGT 
TTCAGGGCTG CATTGAGTGA CACTGTGGAG CTATGGGAGT CCCTGCAGCA GCGTGGGGAG 
GCCAAGCTAC TCCGGGCAGT GGAGGAGAAG TTCACCATCG AGCCTTTCAA GGCCAAGTCC 
ATGAAGGATG TGGAAGACCT TGGCAATCTC GTGCAGATCC AGAGGACAAG AAGCTCCTCT 
GAAGCAGCAG CTGGGGAGCT CCCTGCTGTC CGAGACTTAA AGAAGCTGGA GTTTGCGCTG 
GGCCCTGTCT TGGGCCCACA GGTTTTTCCT AAACTGGTGA AGATCCTTGA GGCCTTTACT 
TCCCTTCAGC ATCTAGACCT GGACTCGCTG AGCGAGAACA AGATTGGGGA CGAGGGTGTC 
GCCCAGCTCT CAGCCACCTT CCCTCAGCTG AAGGCCCTGG AGACACTCAA CTTGTCCCAG 
AACAACATCA CCGACGTGGG TGCCTGCAAG CTGGCCGAGG CTCTGCCCGC GCTGGCCACG 
TCCCTCCTCA GGTTGAGGAT GTGGACGCCC ACCATCCCCT TTGGCGTCCA GGAACACCTG 
CAGCAGCTGG ACCCACGAAT CATTCTGAGA TGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_010817558.1
CDS	277..3729
Translation	MNHFQTILSQVRMLLSSHRPSQVQALLDNLLAEELLSREYHHALLHESDGEALARKISLTLLEKGDPDFALLGWIWSGLQAPTAERGPSYKDPGGSGQCPTMELGPLEGSYLELLNSSADPLQLYHLYDRMDLTGEEEIELCSEPDTDTINCEQFSRLLCDMEGDEETREAYANIAELDQYVFQDTQLEGLSKDIFIEHIGLEEMISESVELLEEAGQKSQKRPFPEELPVDLKHRKLAEPLTMPVVTGTFLVGPVSDSLVQPCPPPPALFNTEPASSQTRLKDAAPPSSSLLSCLSLPAGPIQIIPTLPTLPQGLWPISGTGTGVSSILIYQSEMPPASQTPPSSGPAVQSLPKSPDRPGSASPFAPSAADLPSMPEPALTSRAGLTEDEMSPTKCPAAGGASSKLPKWPESVEQFYQSLRDKYQAQPTGPEGTLVDMDLVRVRLEKSSGKSQERELATLDWAERQPARGGLAEVLLAASDRQQPRETRVIAVLGKAGHGKSHWARAVSRAWAHGQLPQYDFVFCVPCHRLDRPGTSYRLQDLLSSLGPQPLPVDDEVLSYIARRPNRILLILDGFEDLEAHDGSLHSTGGPGSAEPRSLRGLLAGLLQRKLLRGCTLLLTAWPRGRLAQSLSKVDALFEVAGFSAQQVETYVRRYFESEGTAEHQERALALLQARPFLLSHSHSPTVCRTVCQLAEALLQRSDEAQLPSTLTGLYVGLLGPAARDSPPGALAELARLAWELGRVHQRGLKAGCLPSAEARAWAVAQGWLRPTPGAPETELAFSSFLLQCFLGAVWLALSGEIKDKELPQYLALTPRKKRPYDNWLEGVPRFLVGLVFQPRAGCLGALAGPAATTSADRKQKVLTRYLKRLQPGTLQAGRLLELLHCAHEALDPGLWQHVLQGLPARLSFLGTRLTPPDTHVLGSALEAAGRDFSLDLRSTGVDASGLGSLVGLSCVTRFRAALSDTVELWESLQQRGEAKLLRAVEEKFTIEPFKAKSMKDVEDLGNLVQIQRTRSSSEAAAGELPAVRDLKKLEFALGPVLGPQVFPKLVKILEAFTSLQHLDLDSLSENKIGDEGVAQLSATFPQLKALETLNLSQNNITDVGACKLAEALPALATSLLRLRMWTPTIPFGVQEHLQQLDPRIILR

Target ORF information:

RefSeq Version	XM_010819256.3
Organism	Bos taurus(cattle)
Definition	Bos taurus class II major histocompatibility complex transactivator (CIITA), transcript variant X2, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_010819256.3

ORF Insert Sequence:

ATGAATCACT TCCAGACCAT CCTGTCTCAG GTCCGGATGT TGCTCTCTAG CCATCGGCCG 
AGCCAAGTGC AGGCGCTTCT GGACAACCTG CTGGCGGAAG AGCTCCTCTC CAGGGAGTAC 
CACCATGCCC TGCTCCATGA GTCTGATGGT GAGGCTCTGG CCAGGAAGAT CTCCTTGACC 
CTGCTGGAGA AAGGAGACCC AGACTTCGCC CTCTTGGGGT GGATCTGGAG TGGGCTGCAG 
GCCCCCACAG CAGAGAGGGG CCCCAGCTAC AAGGACCCTG GTGGCAGTGG ACAGTGCCCA 
ACCATGGAGC TGGGGCCTCT AGAAGGCAGT TACTTAGAAC TTCTCAACAG CAGTGCTGAC 
CCTTTGCAGC TCTACCACCT CTACGACCGG ATGGATCTGA CAGGAGAAGA AGAAATAGAG 
CTCTGCTCAG AGCCTGACAC AGACACCATC AACTGCGAAC AGTTCAGCAG GCTGTTGTGT 
GACATGGAAG GTGATGAAGA GACCAGGGAA GCTTATGCCA ATATCGCGGA ATTGGACCAG 
TACGTCTTCC AGGACACCCA GCTGGAGGGC CTGAGCAAAG ACATTTTCAT CGAGCACATA 
GGATTGGAAG AAATGATCAG CGAGAGCGTG GAATTGCTGG AGGAGGCAGG GCAGAAAAGT 
CAGAAGAGAC CCTTCCCAGA GGAGCTGCCT GTGGATCTGA AGCACCGGAA GCTAGCCGAG 
CCCCTCACCA TGCCCGTGGT GACTGGCACT TTCCTGGTGG GGCCAGTGAG CGACTCCTTG 
GTTCAGCCTT GCCCGCCACC TCCTGCTCTG TTCAACACGG AGCCAGCATC CAGCCAGACC 
CGGCTGAAGG ACGCAGCGCC TCCGTCCAGT TCCTTGTTGA GCTGCCTGAG TCTTCCCGCG 
GGACCCATTC AGATTATCCC CACTCTCCCC ACTCTGCCCC AGGGGCTGTG GCCGATCTCA 
GGGACTGGGA CGGGGGTCTC CAGTATACTC ATCTACCAAA GTGAGATGCC CCCGGCCAGC 
CAAACACCCC CATCCAGCGG GCCTGCTGTC CAGAGCCTTC CCAAGTCCCC AGACCGGCCT 
GGCTCTGCCA GCCCCTTTGC CCCGTCTGCC GCTGACCTCC CCAGCATGCC CGAACCGGCC 
CTCACCTCCC GTGCAGGCCT GACAGAGGAT GAGATGTCCC CCACCAAATG CCCAGCAGCT 
GGCGGGGCCT CCAGCAAACT TCCCAAGTGG CCTGAGAGCG TGGAGCAGTT CTACCAGTCG 
CTACGGGACA AGTACCAGGC CCAGCCCACC GGCCCGGAAG GCACCCTGGT GGACATGGAC 
CTGGTGAGGG TGAGGCTGGA GAAGAGCAGC GGGAAGAGCC AGGAGAGAGA GCTGGCCACC 
CTGGACTGGG CAGAGCGGCA GCCGGCCCGA GGGGGTCTGG CCGAGGTGCT GCTGGCCGCC 
AGCGACCGCC AGCAGCCCCG GGAGACGCGG GTGATCGCTG TGCTGGGCAA AGCGGGACAT 
GGGAAGAGTC ACTGGGCCCG GGCCGTGAGC CGGGCCTGGG CCCACGGCCA GCTGCCACAG 
TACGACTTTG TCTTCTGTGT CCCCTGCCAT CGTTTGGACC GTCCGGGGAC CTCCTACCGC 
CTGCAGGATC TGCTGTCCTC CCTGGGCCCG CAGCCGTTGC CAGTGGACGA CGAGGTCCTC 
AGTTACATTG CGAGGAGACC CAACCGCATC CTGCTCATCC TGGATGGCTT CGAGGACCTG 
GAAGCCCACG ATGGCTCCCT GCACAGCACA GGAGGCCCCG GGTCGGCAGA GCCCCGCTCC 
CTCCGGGGGC TGCTGGCGGG CCTCCTCCAG CGCAAGCTGC TGCGGGGCTG CACCCTGCTG 
CTCACGGCCT GGCCCCGGGG CCGCCTGGCC CAGAGCCTGA GCAAGGTGGA CGCCCTGTTT 
GAGGTGGCCG GCTTCTCGGC CCAGCAGGTT GAGACCTATG TGAGGCGTTA CTTTGAGTCG 
GAGGGGACCG CTGAGCACCA AGAGAGAGCC CTGGCGCTCC TGCAGGCCCG GCCGTTCCTC 
CTGAGCCACA GCCACAGCCC CACCGTGTGC CGGACCGTGT GCCAGCTCGC AGAGGCCCTC 
CTGCAGCGGA GTGATGAAGC CCAGCTGCCC TCCACGCTCA CGGGCCTCTA CGTGGGCCTG 
CTAGGCCCAG CAGCTCGAGA TAGCCCCCCA GGGGCCCTGG CGGAACTGGC CAGGCTGGCC 
TGGGAGCTGG GCCGTGTGCA CCAGAGGGGC CTGAAGGCGG GCTGTTTACC GTCGGCGGAG 
GCGAGGGCCT GGGCTGTGGC CCAAGGCTGG TTGCGGCCCA CCCCGGGGGC CCCAGAGACG 
GAGCTGGCCT TCTCCAGCTT CCTCCTGCAG TGCTTCCTGG GGGCTGTGTG GCTGGCTCTG 
AGCGGCGAAA TCAAGGACAA GGAGCTGCCG CAGTATCTGG CCTTGACCCC GAGGAAGAAG 
CGGCCCTATG ACAACTGGCT GGAGGGCGTG CCGCGCTTCT TGGTCGGACT GGTCTTCCAG 
CCTCGCGCCG GCTGCCTGGG GGCCCTGGCA GGGCCGGCGG CCACCACGTC AGCGGACAGG 
AAGCAGAAGG TGCTCACGAG GTACCTGAAG CGTCTGCAGC CCGGGACGCT GCAGGCGGGG 
CGGCTGCTGG AGCTGCTGCA CTGTGCCCAC GAGGCGCTGG ACCCCGGGCT CTGGCAGCAC 
GTGCTGCAGG GGCTCCCTGC CCGCCTCTCC TTCCTGGGCA CACGGCTCAC GCCTCCTGAC 
ACCCATGTGC TGGGCAGCGC CCTGGAGGCC GCGGGCCGAG ACTTTTCCCT GGACCTCCGC 
AGCACTGGCG TCGACGCCTC TGGACTGGGG AGCCTCGTGG GACTCAGCTG TGTCACCCGT 
TTCAGGGCTG CATTGAGTGA CACTGTGGAG CTATGGGAGT CCCTGCAGCA GCGTGGGGAG 
GCCAAGCTAC TCCGGGCAGT GGAGGAGAAG TTCACCATCG AGCCTTTCAA GGCCAAGTCC 
ATGAAGGATG TGGAAGACCT TGGCAATCTC GTGCAGATCC AGAGGACAAG AAGCTCCTCT 
GAAGCAGCAG CTGGGGAGCT CCCTGCTGTC CGAGACTTAA AGAAGCTGGA GTTTGCGCTG 
GGCCCTGTCT TGGGCCCACA GGTTTTTCCT AAACTGGTGA AGATCCTTGA GGCCTTTACT 
TCCCTTCAGC ATCTAGACCT GGACTCGCTG AGCGAGAACA AGATTGGGGA CGAGGGTGTC 
GCCCAGCTCT CAGCCACCTT CCCTCAGCTG AAGGCCCTGG AGACACTCAA CTTGTCCCAG 
AACAACATCA CCGACGTGGG TGCCTGCAAG CTGGCCGAGG CTCTGCCCGC GCTGGCCACG 
TCCCTCCTCA GGTTGAGGAT GTGGACGCCC ACCATCCCCT TTGGCGTCCA GGAACACCTG 
CAGCAGCTGG ACCCACGAAT CATTCTGAGA TGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

CIITA ( XM_010819256.2 ) cDNA ORF clone, Bos taurus(cattle) -> XP_010817558.1 Bos taurus class II, major histocompatibility complex, transactivator (CIITA), transcript variant X3, mRNA.

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CloneID	OBa47247
Clone ID Related Accession (Same CDS sequence)	XM_015469299.1 , XM_010819256.3 , XM_010819256.2
Accession Version	XM_010819256.2	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3453bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-01-25
Organism	Bos taurus(cattle)
Product	MHC class II transactivator isoform X3
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003104571.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jan 26, 2016 this sequence version replaced XM_010819256.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bos taurus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGAATCACT TCCAGACCAT CCTGTCTCAG GTCCGGATGT TGCTCTCTAG CCATCGGCCG 
AGCCAAGTGC AGGCGCTTCT GGACAACCTG CTGGCGGAAG AGCTCCTCTC CAGGGAGTAC 
CACCATGCCC TGCTCCATGA GTCTGATGGT GAGGCTCTGG CCAGGAAGAT CTCCTTGACC 
CTGCTGGAGA AAGGAGACCC AGACTTCGCC CTCTTGGGGT GGATCTGGAG TGGGCTGCAG 
GCCCCCACAG CAGAGAGGGG CCCCAGCTAC AAGGACCCTG GTGGCAGTGG ACAGTGCCCA 
ACCATGGAGC TGGGGCCTCT AGAAGGCAGT TACTTAGAAC TTCTCAACAG CAGTGCTGAC 
CCTTTGCAGC TCTACCACCT CTACGACCGG ATGGATCTGA CAGGAGAAGA AGAAATAGAG 
CTCTGCTCAG AGCCTGACAC AGACACCATC AACTGCGAAC AGTTCAGCAG GCTGTTGTGT 
GACATGGAAG GTGATGAAGA GACCAGGGAA GCTTATGCCA ATATCGCGGA ATTGGACCAG 
TACGTCTTCC AGGACACCCA GCTGGAGGGC CTGAGCAAAG ACATTTTCAT CGAGCACATA 
GGATTGGAAG AAATGATCAG CGAGAGCGTG GAATTGCTGG AGGAGGCAGG GCAGAAAAGT 
CAGAAGAGAC CCTTCCCAGA GGAGCTGCCT GTGGATCTGA AGCACCGGAA GCTAGCCGAG 
CCCCTCACCA TGCCCGTGGT GACTGGCACT TTCCTGGTGG GGCCAGTGAG CGACTCCTTG 
GTTCAGCCTT GCCCGCCACC TCCTGCTCTG TTCAACACGG AGCCAGCATC CAGCCAGACC 
CGGCTGAAGG ACGCAGCGCC TCCGTCCAGT TCCTTGTTGA GCTGCCTGAG TCTTCCCGCG 
GGACCCATTC AGATTATCCC CACTCTCCCC ACTCTGCCCC AGGGGCTGTG GCCGATCTCA 
GGGACTGGGA CGGGGGTCTC CAGTATACTC ATCTACCAAA GTGAGATGCC CCCGGCCAGC 
CAAACACCCC CATCCAGCGG GCCTGCTGTC CAGAGCCTTC CCAAGTCCCC AGACCGGCCT 
GGCTCTGCCA GCCCCTTTGC CCCGTCTGCC GCTGACCTCC CCAGCATGCC CGAACCGGCC 
CTCACCTCCC GTGCAGGCCT GACAGAGGAT GAGATGTCCC CCACCAAATG CCCAGCAGCT 
GGCGGGGCCT CCAGCAAACT TCCCAAGTGG CCTGAGAGCG TGGAGCAGTT CTACCAGTCG 
CTACGGGACA AGTACCAGGC CCAGCCCACC GGCCCGGAAG GCACCCTGGT GGACATGGAC 
CTGGTGAGGG TGAGGCTGGA GAAGAGCAGC GGGAAGAGCC AGGAGAGAGA GCTGGCCACC 
CTGGACTGGG CAGAGCGGCA GCCGGCCCGA GGGGGTCTGG CCGAGGTGCT GCTGGCCGCC 
AGCGACCGCC AGCAGCCCCG GGAGACGCGG GTGATCGCTG TGCTGGGCAA AGCGGGACAT 
GGGAAGAGTC ACTGGGCCCG GGCCGTGAGC CGGGCCTGGG CCCACGGCCA GCTGCCACAG 
TACGACTTTG TCTTCTGTGT CCCCTGCCAT CGTTTGGACC GTCCGGGGAC CTCCTACCGC 
CTGCAGGATC TGCTGTCCTC CCTGGGCCCG CAGCCGTTGC CAGTGGACGA CGAGGTCCTC 
AGTTACATTG CGAGGAGACC CAACCGCATC CTGCTCATCC TGGATGGCTT CGAGGACCTG 
GAAGCCCACG ATGGCTCCCT GCACAGCACA GGAGGCCCCG GGTCGGCAGA GCCCCGCTCC 
CTCCGGGGGC TGCTGGCGGG CCTCCTCCAG CGCAAGCTGC TGCGGGGCTG CACCCTGCTG 
CTCACGGCCT GGCCCCGGGG CCGCCTGGCC CAGAGCCTGA GCAAGGTGGA CGCCCTGTTT 
GAGGTGGCCG GCTTCTCGGC CCAGCAGGTT GAGACCTATG TGAGGCGTTA CTTTGAGTCG 
GAGGGGACCG CTGAGCACCA AGAGAGAGCC CTGGCGCTCC TGCAGGCCCG GCCGTTCCTC 
CTGAGCCACA GCCACAGCCC CACCGTGTGC CGGACCGTGT GCCAGCTCGC AGAGGCCCTC 
CTGCAGCGGA GTGATGAAGC CCAGCTGCCC TCCACGCTCA CGGGCCTCTA CGTGGGCCTG 
CTAGGCCCAG CAGCTCGAGA TAGCCCCCCA GGGGCCCTGG CGGAACTGGC CAGGCTGGCC 
TGGGAGCTGG GCCGTGTGCA CCAGAGGGGC CTGAAGGCGG GCTGTTTACC GTCGGCGGAG 
GCGAGGGCCT GGGCTGTGGC CCAAGGCTGG TTGCGGCCCA CCCCGGGGGC CCCAGAGACG 
GAGCTGGCCT TCTCCAGCTT CCTCCTGCAG TGCTTCCTGG GGGCTGTGTG GCTGGCTCTG 
AGCGGCGAAA TCAAGGACAA GGAGCTGCCG CAGTATCTGG CCTTGACCCC GAGGAAGAAG 
CGGCCCTATG ACAACTGGCT GGAGGGCGTG CCGCGCTTCT TGGTCGGACT GGTCTTCCAG 
CCTCGCGCCG GCTGCCTGGG GGCCCTGGCA GGGCCGGCGG CCACCACGTC AGCGGACAGG 
AAGCAGAAGG TGCTCACGAG GTACCTGAAG CGTCTGCAGC CCGGGACGCT GCAGGCGGGG 
CGGCTGCTGG AGCTGCTGCA CTGTGCCCAC GAGGCGCTGG ACCCCGGGCT CTGGCAGCAC 
GTGCTGCAGG GGCTCCCTGC CCGCCTCTCC TTCCTGGGCA CACGGCTCAC GCCTCCTGAC 
ACCCATGTGC TGGGCAGCGC CCTGGAGGCC GCGGGCCGAG ACTTTTCCCT GGACCTCCGC 
AGCACTGGCG TCGACGCCTC TGGACTGGGG AGCCTCGTGG GACTCAGCTG TGTCACCCGT 
TTCAGGGCTG CATTGAGTGA CACTGTGGAG CTATGGGAGT CCCTGCAGCA GCGTGGGGAG 
GCCAAGCTAC TCCGGGCAGT GGAGGAGAAG TTCACCATCG AGCCTTTCAA GGCCAAGTCC 
ATGAAGGATG TGGAAGACCT TGGCAATCTC GTGCAGATCC AGAGGACAAG AAGCTCCTCT 
GAAGCAGCAG CTGGGGAGCT CCCTGCTGTC CGAGACTTAA AGAAGCTGGA GTTTGCGCTG 
GGCCCTGTCT TGGGCCCACA GGTTTTTCCT AAACTGGTGA AGATCCTTGA GGCCTTTACT 
TCCCTTCAGC ATCTAGACCT GGACTCGCTG AGCGAGAACA AGATTGGGGA CGAGGGTGTC 
GCCCAGCTCT CAGCCACCTT CCCTCAGCTG AAGGCCCTGG AGACACTCAA CTTGTCCCAG 
AACAACATCA CCGACGTGGG TGCCTGCAAG CTGGCCGAGG CTCTGCCCGC GCTGGCCACG 
TCCCTCCTCA GGTTGAGGAT GTGGACGCCC ACCATCCCCT TTGGCGTCCA GGAACACCTG 
CAGCAGCTGG ACCCACGAAT CATTCTGAGA TGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_010817558.1
CDS	266..3718
Translation	MNHFQTILSQVRMLLSSHRPSQVQALLDNLLAEELLSREYHHALLHESDGEALARKISLTLLEKGDPDFALLGWIWSGLQAPTAERGPSYKDPGGSGQCPTMELGPLEGSYLELLNSSADPLQLYHLYDRMDLTGEEEIELCSEPDTDTINCEQFSRLLCDMEGDEETREAYANIAELDQYVFQDTQLEGLSKDIFIEHIGLEEMISESVELLEEAGQKSQKRPFPEELPVDLKHRKLAEPLTMPVVTGTFLVGPVSDSLVQPCPPPPALFNTEPASSQTRLKDAAPPSSSLLSCLSLPAGPIQIIPTLPTLPQGLWPISGTGTGVSSILIYQSEMPPASQTPPSSGPAVQSLPKSPDRPGSASPFAPSAADLPSMPEPALTSRAGLTEDEMSPTKCPAAGGASSKLPKWPESVEQFYQSLRDKYQAQPTGPEGTLVDMDLVRVRLEKSSGKSQERELATLDWAERQPARGGLAEVLLAASDRQQPRETRVIAVLGKAGHGKSHWARAVSRAWAHGQLPQYDFVFCVPCHRLDRPGTSYRLQDLLSSLGPQPLPVDDEVLSYIARRPNRILLILDGFEDLEAHDGSLHSTGGPGSAEPRSLRGLLAGLLQRKLLRGCTLLLTAWPRGRLAQSLSKVDALFEVAGFSAQQVETYVRRYFESEGTAEHQERALALLQARPFLLSHSHSPTVCRTVCQLAEALLQRSDEAQLPSTLTGLYVGLLGPAARDSPPGALAELARLAWELGRVHQRGLKAGCLPSAEARAWAVAQGWLRPTPGAPETELAFSSFLLQCFLGAVWLALSGEIKDKELPQYLALTPRKKRPYDNWLEGVPRFLVGLVFQPRAGCLGALAGPAATTSADRKQKVLTRYLKRLQPGTLQAGRLLELLHCAHEALDPGLWQHVLQGLPARLSFLGTRLTPPDTHVLGSALEAAGRDFSLDLRSTGVDASGLGSLVGLSCVTRFRAALSDTVELWESLQQRGEAKLLRAVEEKFTIEPFKAKSMKDVEDLGNLVQIQRTRSSSEAAAGELPAVRDLKKLEFALGPVLGPQVFPKLVKILEAFTSLQHLDLDSLSENKIGDEGVAQLSATFPQLKALETLNLSQNNITDVGACKLAEALPALATSLLRLRMWTPTIPFGVQEHLQQLDPRIILR

Target ORF information:

RefSeq Version	XM_010819256.2
Organism	Bos taurus(cattle)
Definition	Bos taurus class II, major histocompatibility complex, transactivator (CIITA), transcript variant X3, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_010819256.2

ORF Insert Sequence:

ATGAATCACT TCCAGACCAT CCTGTCTCAG GTCCGGATGT TGCTCTCTAG CCATCGGCCG 
AGCCAAGTGC AGGCGCTTCT GGACAACCTG CTGGCGGAAG AGCTCCTCTC CAGGGAGTAC 
CACCATGCCC TGCTCCATGA GTCTGATGGT GAGGCTCTGG CCAGGAAGAT CTCCTTGACC 
CTGCTGGAGA AAGGAGACCC AGACTTCGCC CTCTTGGGGT GGATCTGGAG TGGGCTGCAG 
GCCCCCACAG CAGAGAGGGG CCCCAGCTAC AAGGACCCTG GTGGCAGTGG ACAGTGCCCA 
ACCATGGAGC TGGGGCCTCT AGAAGGCAGT TACTTAGAAC TTCTCAACAG CAGTGCTGAC 
CCTTTGCAGC TCTACCACCT CTACGACCGG ATGGATCTGA CAGGAGAAGA AGAAATAGAG 
CTCTGCTCAG AGCCTGACAC AGACACCATC AACTGCGAAC AGTTCAGCAG GCTGTTGTGT 
GACATGGAAG GTGATGAAGA GACCAGGGAA GCTTATGCCA ATATCGCGGA ATTGGACCAG 
TACGTCTTCC AGGACACCCA GCTGGAGGGC CTGAGCAAAG ACATTTTCAT CGAGCACATA 
GGATTGGAAG AAATGATCAG CGAGAGCGTG GAATTGCTGG AGGAGGCAGG GCAGAAAAGT 
CAGAAGAGAC CCTTCCCAGA GGAGCTGCCT GTGGATCTGA AGCACCGGAA GCTAGCCGAG 
CCCCTCACCA TGCCCGTGGT GACTGGCACT TTCCTGGTGG GGCCAGTGAG CGACTCCTTG 
GTTCAGCCTT GCCCGCCACC TCCTGCTCTG TTCAACACGG AGCCAGCATC CAGCCAGACC 
CGGCTGAAGG ACGCAGCGCC TCCGTCCAGT TCCTTGTTGA GCTGCCTGAG TCTTCCCGCG 
GGACCCATTC AGATTATCCC CACTCTCCCC ACTCTGCCCC AGGGGCTGTG GCCGATCTCA 
GGGACTGGGA CGGGGGTCTC CAGTATACTC ATCTACCAAA GTGAGATGCC CCCGGCCAGC 
CAAACACCCC CATCCAGCGG GCCTGCTGTC CAGAGCCTTC CCAAGTCCCC AGACCGGCCT 
GGCTCTGCCA GCCCCTTTGC CCCGTCTGCC GCTGACCTCC CCAGCATGCC CGAACCGGCC 
CTCACCTCCC GTGCAGGCCT GACAGAGGAT GAGATGTCCC CCACCAAATG CCCAGCAGCT 
GGCGGGGCCT CCAGCAAACT TCCCAAGTGG CCTGAGAGCG TGGAGCAGTT CTACCAGTCG 
CTACGGGACA AGTACCAGGC CCAGCCCACC GGCCCGGAAG GCACCCTGGT GGACATGGAC 
CTGGTGAGGG TGAGGCTGGA GAAGAGCAGC GGGAAGAGCC AGGAGAGAGA GCTGGCCACC 
CTGGACTGGG CAGAGCGGCA GCCGGCCCGA GGGGGTCTGG CCGAGGTGCT GCTGGCCGCC 
AGCGACCGCC AGCAGCCCCG GGAGACGCGG GTGATCGCTG TGCTGGGCAA AGCGGGACAT 
GGGAAGAGTC ACTGGGCCCG GGCCGTGAGC CGGGCCTGGG CCCACGGCCA GCTGCCACAG 
TACGACTTTG TCTTCTGTGT CCCCTGCCAT CGTTTGGACC GTCCGGGGAC CTCCTACCGC 
CTGCAGGATC TGCTGTCCTC CCTGGGCCCG CAGCCGTTGC CAGTGGACGA CGAGGTCCTC 
AGTTACATTG CGAGGAGACC CAACCGCATC CTGCTCATCC TGGATGGCTT CGAGGACCTG 
GAAGCCCACG ATGGCTCCCT GCACAGCACA GGAGGCCCCG GGTCGGCAGA GCCCCGCTCC 
CTCCGGGGGC TGCTGGCGGG CCTCCTCCAG CGCAAGCTGC TGCGGGGCTG CACCCTGCTG 
CTCACGGCCT GGCCCCGGGG CCGCCTGGCC CAGAGCCTGA GCAAGGTGGA CGCCCTGTTT 
GAGGTGGCCG GCTTCTCGGC CCAGCAGGTT GAGACCTATG TGAGGCGTTA CTTTGAGTCG 
GAGGGGACCG CTGAGCACCA AGAGAGAGCC CTGGCGCTCC TGCAGGCCCG GCCGTTCCTC 
CTGAGCCACA GCCACAGCCC CACCGTGTGC CGGACCGTGT GCCAGCTCGC AGAGGCCCTC 
CTGCAGCGGA GTGATGAAGC CCAGCTGCCC TCCACGCTCA CGGGCCTCTA CGTGGGCCTG 
CTAGGCCCAG CAGCTCGAGA TAGCCCCCCA GGGGCCCTGG CGGAACTGGC CAGGCTGGCC 
TGGGAGCTGG GCCGTGTGCA CCAGAGGGGC CTGAAGGCGG GCTGTTTACC GTCGGCGGAG 
GCGAGGGCCT GGGCTGTGGC CCAAGGCTGG TTGCGGCCCA CCCCGGGGGC CCCAGAGACG 
GAGCTGGCCT TCTCCAGCTT CCTCCTGCAG TGCTTCCTGG GGGCTGTGTG GCTGGCTCTG 
AGCGGCGAAA TCAAGGACAA GGAGCTGCCG CAGTATCTGG CCTTGACCCC GAGGAAGAAG 
CGGCCCTATG ACAACTGGCT GGAGGGCGTG CCGCGCTTCT TGGTCGGACT GGTCTTCCAG 
CCTCGCGCCG GCTGCCTGGG GGCCCTGGCA GGGCCGGCGG CCACCACGTC AGCGGACAGG 
AAGCAGAAGG TGCTCACGAG GTACCTGAAG CGTCTGCAGC CCGGGACGCT GCAGGCGGGG 
CGGCTGCTGG AGCTGCTGCA CTGTGCCCAC GAGGCGCTGG ACCCCGGGCT CTGGCAGCAC 
GTGCTGCAGG GGCTCCCTGC CCGCCTCTCC TTCCTGGGCA CACGGCTCAC GCCTCCTGAC 
ACCCATGTGC TGGGCAGCGC CCTGGAGGCC GCGGGCCGAG ACTTTTCCCT GGACCTCCGC 
AGCACTGGCG TCGACGCCTC TGGACTGGGG AGCCTCGTGG GACTCAGCTG TGTCACCCGT 
TTCAGGGCTG CATTGAGTGA CACTGTGGAG CTATGGGAGT CCCTGCAGCA GCGTGGGGAG 
GCCAAGCTAC TCCGGGCAGT GGAGGAGAAG TTCACCATCG AGCCTTTCAA GGCCAAGTCC 
ATGAAGGATG TGGAAGACCT TGGCAATCTC GTGCAGATCC AGAGGACAAG AAGCTCCTCT 
GAAGCAGCAG CTGGGGAGCT CCCTGCTGTC CGAGACTTAA AGAAGCTGGA GTTTGCGCTG 
GGCCCTGTCT TGGGCCCACA GGTTTTTCCT AAACTGGTGA AGATCCTTGA GGCCTTTACT 
TCCCTTCAGC ATCTAGACCT GGACTCGCTG AGCGAGAACA AGATTGGGGA CGAGGGTGTC 
GCCCAGCTCT CAGCCACCTT CCCTCAGCTG AAGGCCCTGG AGACACTCAA CTTGTCCCAG 
AACAACATCA CCGACGTGGG TGCCTGCAAG CTGGCCGAGG CTCTGCCCGC GCTGGCCACG 
TCCCTCCTCA GGTTGAGGAT GTGGACGCCC ACCATCCCCT TTGGCGTCCA GGAACACCTG 
CAGCAGCTGG ACCCACGAAT CATTCTGAGA TGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Gene Symbol	CIITA
Entrez Gene ID	508720
Full Name	class II major histocompatibility complex transactivator
General protein information	Preferred Names class II major histocompatibility complex transactivator Names MHC class II transactivator
Gene Type	protein-coding
Organism	Bos taurus(cattle)

Bos taurus (cattle)	CIITA	XP_002698008.2
	CIITA	XP_001103518.2
Canis lupus familiaris (dog)	CIITA	XP_005621604.1
Gallus gallus (chicken)	LOC416633	XP_004945372.1
Xenopus tropicalis (tropical clawed frog)	ciita	XP_004918329.1
Pan troglodytes (chimpanzee)	CIITA	XP_510813.2
Rattus norvegicus (Norway rat)	Ciita	NP_445981.2
Homo sapiens (human)	CIITA	NP_001273331.1
Mus musculus (house mouse)	Ciita	NP_001230689.1
Danio rerio (zebrafish)	ciita	XP_005163972.1

Next-day Shipping ORF Clones ( in default vector with tag)
1 Clone	30% OFF
2-4 Clone	40% OFF
5 or more Clone	50% OFF
All Other ORF Clones
30% OFF

CIITA cDNA ORF clone, Bos taurus(cattle)

Gene

Clones

gRNAs

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見積依頼

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