Ciita gene cDNA ORF clone, Mus musculus(house mouse)

mRNA	Protein	Name
NM_007575.4	NP_031601.1	MHC class II transactivator isoform 2
NM_001302618.1	NP_001289547.1	MHC class II transactivator isoform 4
XM_006521725.3	XP_006521788.1	MHC class II transactivator isoform X2
XM_030248943.1	XP_030104803.1	MHC class II transactivator isoform X1
XM_011245810.3	XP_011244112.1	MHC class II transactivator isoform X3
NM_001243761.2	NP_001230690.1	MHC class II transactivator isoform 3
XM_006521726.3	XP_006521789.1	MHC class II transactivator isoform X3
XM_006521724.2	XP_006521787.1	MHC class II transactivator isoform X2
NM_001243760.2	NP_001230689.1	MHC class II transactivator isoform 1
XM_011245810.2	XP_011244112.1	MHC class II transactivator isoform X2
NM_001302619.1	NP_001289548.1	MHC class II transactivator isoform 5
XM_006521726.4	XP_006521789.1	MHC class II transactivator isoform X4

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)
OMu51824	NM_001302619.1 Latest version!	Mus musculus class II transactivator (Ciita), transcript variant 5, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	16	$559.30 $799.00
OMu51824	XM_006521725.3 Latest version!	Mus musculus class II transactivator (Ciita), transcript variant X2, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	16	$559.30 $799.00
OMu21731	NM_007575.4 Latest version!	Mus musculus class II transactivator (Ciita), transcript variant 2, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	16	$559.30 $799.00
OMu67229	NM_001302618.1 Latest version!	Mus musculus class II transactivator (Ciita), transcript variant 4, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	20	$559.30 $799.00
OMu51824	XM_011245810.3 Latest version!	Mus musculus class II transactivator (Ciita), transcript variant X3, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	19-21	$559.30 $799.00
OMu51825	XM_006521726.4 Latest version!	Mus musculus class II transactivator (Ciita), transcript variant X4, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	19-21	$559.30 $799.00
OMu86862	XM_030248943.1 Latest version!	Mus musculus class II transactivator (Ciita), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	19-21	$559.30 $799.00
OMu21832	NM_001243760.2 Latest version!	Mus musculus class II transactivator (Ciita), transcript variant 1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	20	$559.30 $799.00
OMu21834	NM_001243761.2 Latest version!	Mus musculus class II transactivator (Ciita), transcript variant 3, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	20	$559.30 $799.00
OMu51823	XM_006521724.2 Latest version!	Mus musculus class II transactivator (Ciita), transcript variant X2, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	20	$559.30 $799.00
View Old Accession Versions >>
OMu51824	XM_011245810.2	Mus musculus class II transactivator (Ciita), transcript variant X3, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	16	$559.30 $799.00
OMu51825	XM_006521726.3	Mus musculus class II transactivator (Ciita), transcript variant X4, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	20	$559.30 $799.00
Hide Old Accession Versions >>

Ciita ( NM_001302619.1 ) cDNA ORF clone, Mus musculus(house mouse) -> NP_001289548.1 Mus musculus class II transactivator (Ciita), transcript variant 5, mRNA.

Price & Availability↑

CloneID	OMu51824
Clone ID Related Accession (Same CDS sequence)	XM_006521725.3 , XM_011245810.3 , XM_011245810.2 , NM_001302619.1
Accession Version	NM_001302619.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3165bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-10-24
Organism	Mus musculus(house mouse)
Product	MHC class II transactivator isoform 5
Comment	Comment: REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from AK143956.1, AC122352.4, AK138822.1, AK153609.1, BC107330.1, BE850370.1 and AI182240.1. Transcript Variant: This variant (5) differs in the 5' UTR, lacks a portion of the 5' coding region and uses a downstream start codon compared to variant 4. It encodes isoform 5, which is shorter and has a distinct N-terminus, compared to isoform 4. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## RNAseq introns :: single sample supports all introns SAMN00849385 [ECO:0000348] ##Evidence-Data-END##

ATGGATCTGG GATCTCCAGA GGGCAGCTAC CTGGAACTCC TTAACAGTGA TGCCGACCCC 
CTACATCTCT ACCACCTCTA TGACCAGATG GACCTGGCTG GGGAGGAGGA GATCGAACTC 
AGCTCAGAGC CAGACACAGA TACCATCAAC TGCGACCAGT TCAGCAAGCT GTTGCAGGAC 
ATGGAACTGG ATGAAGAGAC CCGGGAGGCC TATGCCAACA TTGCGGAACT GGATCAGTAC 
GTGTTCCAGG ATACCCAGCT CGAGGGCCTG AGCAAGGACC TCTTCATAGA GCACATTGGA 
GCAGAGGAAG GCTTTGGTGA GAACATAGAG ATCCCTGTAG AAGCAGGACA GAAGCCTCAG 
AAGAGACGCT TCCCGGAAGA GCATGCTATG GACTCAAAGC ACAGGAAGCT AGTGCCCACC 
TCTAGGACCT CACTGAACTA TTTGGATCTC CCCACTGGGC ACATCCAGAT CTTCACCACT 
CTGCCCCAGG GACTCTGGCA AATCTCAGGG GCTGGCACAG GTCTCTCCAG TGTCCTAATC 
TACCACGGTG AGATGCCCCA GGTCAACCAA GTGCTCCCTT CAAGCAGCCT CAGTATCCCC 
AGTCTCCCCG AGTCCCCAGA CCGGCCTGGC TCCACCAGCC CCTTCACACC ATCTGCAGCT 
GACCTGCCCA GCATGCCCGA ACCTGCGCTG ACCTCCCGTG TAAATGAGAC AGAGGACACA 
TCTCCCTCCC CATGCCAAGA GGGTCCCGAG TCTTCCATCA AGCTTCCAAA ATGGCCAGAG 
GCTGTGGAGC GATTCCAGCA CTCCCTACAG GACAAATACA AGGCATTGCC CCAGAGCCCA 
AGGGGTCCTC TGGTGGCCGT GGAGCTGGTA CGGGCCAGGC TGGAAAGAGG CAGCAACAAG 
AGCCAGGAAA GGGAGCTGGC CACTCCCGAC TGGACAGAGC GCCAGCTAGC CCACGGTGGT 
CTGGCAGAGG TACTTCAGGT TGTCAGTGAC TGCAGGCGAC CAGGAGAGAC ACAGGTGGTC 
GCTGTGCTGG GCAAGGCTGG CCAGGGAAAG AGCCACTGGG CCAGGACAGT GAGTCACACC 
TGGGCATGTG GCCAGTTGCT ACAATATGAC TTTGTCTTCT ATGTCCCCTG TCATTGCTTG 
GATCGTCCCG GGGACACCTA CCACCTGCGG GATCTGCTCT GTCCCCCGAG CCTGCAGCCA 
CTGGCCATGG ATGACGAGGT CCTTGATTAT ATCGTGAGGC AGCCAGACCG TGTTCTGCTC 
ATCCTAGATG CTTTCGAGGA GCTAGAGGCC CAAGATGGCC TCCTGCACGG ACCCTGTGGA 
TCTCTGTCCC CAGAGCCCTG CTCCCTCCGA GGACTGCTGG CTGGGATCTT CCAGCGGAAG 
CTACTGCGAG GCTGCACACT GCTCCTCACA GCCCGGCCCC GGGGCCGCCT GGCTCAGAGC 
CTGAGCAAGG CAGATGCCAT CTTTGAGGTG CCCAGCTTCT CTACCAAGCA GGCCAAGACT 
TACATGAGGC ACTACTTTGA GAACTCAGGG ACAGCGGGGA ACCAAGACAA GGCCCTGGGC 
CTCCTGGAGG GCCAGCCTCT TCTCTGCAGC TATAGTCACA GCCCTGTTGT GTGCAGGGCT 
GTGTGCCAGC TCTCCAAGGC CCTGCTAGAA CAGGGCACAG AGGCCCAGCT ACCTTGTACA 
CTTACAGGAC TCTATGTCAG CCTGCTAGGT CCTGCAGCTC AGAACAGTCC TCCCGGAGCC 
TTAGTCGAGC TGGCCAAGCT GGCCTGGGAG CTGGGACGAA GACACCAAAG CACCTTGCAA 
GAAACCCGGT TTTCATCCGT GGAGGTGAAA ACCTGGGCAG TGACCCAAGG CTTGATGCAG 
CAGACCCTGG AGACCACGGA GGCTCAACTG GCCTTCTCCA GTTTTCTGCT ACAGTGTTTC 
CTGGGTGCTG TGTGGCTGGC ACAGTGCAAT GAAATCAAAG ACAAGGAGCT GCCACAGTAC 
CTGGCCTTGA CTCCGAGGAA GAAGAGACCC TATGACAACT GGCTGGAGGG TGTACCACGC 
TTTCTGGCTG GATTAGTTTT CCAGCCTCGA GCCCACTGCC TGGGAGCTCT GGTGGAGCCT 
GCAGTGGCTG CAGTGGCGGA TAGGAAACAG AAGGTTCTTA CCAGGTACCT GAAGCGCCTG 
AAGCTGGGGA CACTCCGGGC AGGGAGGCTG CTGGAGCTGC TCCACTGTGC CCACGAGACA 
CAGCAACCTG GGATATGGGA GCATGTTGCA CACCAGCTCC CTGGCCACCT CTCCTTCCTG 
GGCACCCGGC TCACACCCCC AGATGTGTAT GTGCTGGGCA GGGCCTTGGA GACAGCCAGC 
CAGGACTTCT CCTTGGACCT TCGTCAGACT GGCGTTGAGC CTTCTGGACT GGGAAACCTC 
GTGGGACTCA GCTGTGTCAC CAGTTTCAGG GCCTCCTTGA GTGATACAAT GGCATTATGG 
GAGTCCCTTC AGCAGCAGGG AGAAGCCCAG CTACTCCAGG CGGCAGAGGA GAAGTTCACC 
ATTGAGCCAT TTAAAGCCAA ATCCCCAAAG GATGTGGAAG ACCTGGATCG TCTCGTGCAG 
ACCCAGAGGC TGAGAAACCC CTCAGAAGAT GCAGCCAAGG ATCTTCCTGC CATCCGGGAC 
CTTAAGAAGC TAGAGTTTGC GTTGGGCCCC ATCTTGGGCC CCCAGGCTTT CCCCACACTG 
GCAAAGATCC TTCCAGCCTT CTCTTCTCTG CAACACCTGG ACCTGGACTC ACTTAGTGAG 
AACAAGATCG GAGACAAGGG TGTGTCGAAG CTCTCAGCCA CCTTCCCTCA GCTGAAGGCC 
CTGGAGACGC TCAACTTGTC CCAAAACAAC ATCACTGATG TGGGTGCCTG CAAGCTTGCA 
GAAGCTCTGC CAGCCCTAGC CAAGTCCCTC CTAAGGCTGA GCTTGTACAA TAACTGCATC 
TGTGACAAAG GAGCCAAGAG CCTGGCACAA GTACTTCCGG ACATGGTGTC CCTGCGTGTG 
ATGGATGTCC AGTTCAACAA GTTCACGGCT GCCGGTGCCC AGCAACTGGC CTCCAGCCTT 
CAGAAGTGCC CTCAGGTGGA AACACTGGCA ATGTGGACAC CCACTATCCC CTTTGGGGTT 
CAGGAACACC TGCAGCAGCT GGATGCCAGG ATCAGTCTGA GATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001289548.1
CDS	604..3768
Translation	MDLGSPEGSYLELLNSDADPLHLYHLYDQMDLAGEEEIELSSEPDTDTINCDQFSKLLQDMELDEETREAYANIAELDQYVFQDTQLEGLSKDLFIEHIGAEEGFGENIEIPVEAGQKPQKRRFPEEHAMDSKHRKLVPTSRTSLNYLDLPTGHIQIFTTLPQGLWQISGAGTGLSSVLIYHGEMPQVNQVLPSSSLSIPSLPESPDRPGSTSPFTPSAADLPSMPEPALTSRVNETEDTSPSPCQEGPESSIKLPKWPEAVERFQHSLQDKYKALPQSPRGPLVAVELVRARLERGSNKSQERELATPDWTERQLAHGGLAEVLQVVSDCRRPGETQVVAVLGKAGQGKSHWARTVSHTWACGQLLQYDFVFYVPCHCLDRPGDTYHLRDLLCPPSLQPLAMDDEVLDYIVRQPDRVLLILDAFEELEAQDGLLHGPCGSLSPEPCSLRGLLAGIFQRKLLRGCTLLLTARPRGRLAQSLSKADAIFEVPSFSTKQAKTYMRHYFENSGTAGNQDKALGLLEGQPLLCSYSHSPVVCRAVCQLSKALLEQGTEAQLPCTLTGLYVSLLGPAAQNSPPGALVELAKLAWELGRRHQSTLQETRFSSVEVKTWAVTQGLMQQTLETTEAQLAFSSFLLQCFLGAVWLAQCNEIKDKELPQYLALTPRKKRPYDNWLEGVPRFLAGLVFQPRAHCLGALVEPAVAAVADRKQKVLTRYLKRLKLGTLRAGRLLELLHCAHETQQPGIWEHVAHQLPGHLSFLGTRLTPPDVYVLGRALETASQDFSLDLRQTGVEPSGLGNLVGLSCVTSFRASLSDTMALWESLQQQGEAQLLQAAEEKFTIEPFKAKSPKDVEDLDRLVQTQRLRNPSEDAAKDLPAIRDLKKLEFALGPILGPQAFPTLAKILPAFSSLQHLDLDSLSENKIGDKGVSKLSATFPQLKALETLNLSQNNITDVGACKLAEALPALAKSLLRLSLYNNCICDKGAKSLAQVLPDMVSLRVMDVQFNKFTAAGAQQLASSLQKCPQVETLAMWTPTIPFGVQEHLQQLDARISLR

Target ORF information:

RefSeq Version	NM_001302619.1
Organism	Mus musculus(house mouse)
Definition	Mus musculus class II transactivator (Ciita), transcript variant 5, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001302619.1

ORF Insert Sequence:

ATGGATCTGG GATCTCCAGA GGGCAGCTAC CTGGAACTCC TTAACAGTGA TGCCGACCCC 
CTACATCTCT ACCACCTCTA TGACCAGATG GACCTGGCTG GGGAGGAGGA GATCGAACTC 
AGCTCAGAGC CAGACACAGA TACCATCAAC TGCGACCAGT TCAGCAAGCT GTTGCAGGAC 
ATGGAACTGG ATGAAGAGAC CCGGGAGGCC TATGCCAACA TTGCGGAACT GGATCAGTAC 
GTGTTCCAGG ATACCCAGCT CGAGGGCCTG AGCAAGGACC TCTTCATAGA GCACATTGGA 
GCAGAGGAAG GCTTTGGTGA GAACATAGAG ATCCCTGTAG AAGCAGGACA GAAGCCTCAG 
AAGAGACGCT TCCCGGAAGA GCATGCTATG GACTCAAAGC ACAGGAAGCT AGTGCCCACC 
TCTAGGACCT CACTGAACTA TTTGGATCTC CCCACTGGGC ACATCCAGAT CTTCACCACT 
CTGCCCCAGG GACTCTGGCA AATCTCAGGG GCTGGCACAG GTCTCTCCAG TGTCCTAATC 
TACCACGGTG AGATGCCCCA GGTCAACCAA GTGCTCCCTT CAAGCAGCCT CAGTATCCCC 
AGTCTCCCCG AGTCCCCAGA CCGGCCTGGC TCCACCAGCC CCTTCACACC ATCTGCAGCT 
GACCTGCCCA GCATGCCCGA ACCTGCGCTG ACCTCCCGTG TAAATGAGAC AGAGGACACA 
TCTCCCTCCC CATGCCAAGA GGGTCCCGAG TCTTCCATCA AGCTTCCAAA ATGGCCAGAG 
GCTGTGGAGC GATTCCAGCA CTCCCTACAG GACAAATACA AGGCATTGCC CCAGAGCCCA 
AGGGGTCCTC TGGTGGCCGT GGAGCTGGTA CGGGCCAGGC TGGAAAGAGG CAGCAACAAG 
AGCCAGGAAA GGGAGCTGGC CACTCCCGAC TGGACAGAGC GCCAGCTAGC CCACGGTGGT 
CTGGCAGAGG TACTTCAGGT TGTCAGTGAC TGCAGGCGAC CAGGAGAGAC ACAGGTGGTC 
GCTGTGCTGG GCAAGGCTGG CCAGGGAAAG AGCCACTGGG CCAGGACAGT GAGTCACACC 
TGGGCATGTG GCCAGTTGCT ACAATATGAC TTTGTCTTCT ATGTCCCCTG TCATTGCTTG 
GATCGTCCCG GGGACACCTA CCACCTGCGG GATCTGCTCT GTCCCCCGAG CCTGCAGCCA 
CTGGCCATGG ATGACGAGGT CCTTGATTAT ATCGTGAGGC AGCCAGACCG TGTTCTGCTC 
ATCCTAGATG CTTTCGAGGA GCTAGAGGCC CAAGATGGCC TCCTGCACGG ACCCTGTGGA 
TCTCTGTCCC CAGAGCCCTG CTCCCTCCGA GGACTGCTGG CTGGGATCTT CCAGCGGAAG 
CTACTGCGAG GCTGCACACT GCTCCTCACA GCCCGGCCCC GGGGCCGCCT GGCTCAGAGC 
CTGAGCAAGG CAGATGCCAT CTTTGAGGTG CCCAGCTTCT CTACCAAGCA GGCCAAGACT 
TACATGAGGC ACTACTTTGA GAACTCAGGG ACAGCGGGGA ACCAAGACAA GGCCCTGGGC 
CTCCTGGAGG GCCAGCCTCT TCTCTGCAGC TATAGTCACA GCCCTGTTGT GTGCAGGGCT 
GTGTGCCAGC TCTCCAAGGC CCTGCTAGAA CAGGGCACAG AGGCCCAGCT ACCTTGTACA 
CTTACAGGAC TCTATGTCAG CCTGCTAGGT CCTGCAGCTC AGAACAGTCC TCCCGGAGCC 
TTAGTCGAGC TGGCCAAGCT GGCCTGGGAG CTGGGACGAA GACACCAAAG CACCTTGCAA 
GAAACCCGGT TTTCATCCGT GGAGGTGAAA ACCTGGGCAG TGACCCAAGG CTTGATGCAG 
CAGACCCTGG AGACCACGGA GGCTCAACTG GCCTTCTCCA GTTTTCTGCT ACAGTGTTTC 
CTGGGTGCTG TGTGGCTGGC ACAGTGCAAT GAAATCAAAG ACAAGGAGCT GCCACAGTAC 
CTGGCCTTGA CTCCGAGGAA GAAGAGACCC TATGACAACT GGCTGGAGGG TGTACCACGC 
TTTCTGGCTG GATTAGTTTT CCAGCCTCGA GCCCACTGCC TGGGAGCTCT GGTGGAGCCT 
GCAGTGGCTG CAGTGGCGGA TAGGAAACAG AAGGTTCTTA CCAGGTACCT GAAGCGCCTG 
AAGCTGGGGA CACTCCGGGC AGGGAGGCTG CTGGAGCTGC TCCACTGTGC CCACGAGACA 
CAGCAACCTG GGATATGGGA GCATGTTGCA CACCAGCTCC CTGGCCACCT CTCCTTCCTG 
GGCACCCGGC TCACACCCCC AGATGTGTAT GTGCTGGGCA GGGCCTTGGA GACAGCCAGC 
CAGGACTTCT CCTTGGACCT TCGTCAGACT GGCGTTGAGC CTTCTGGACT GGGAAACCTC 
GTGGGACTCA GCTGTGTCAC CAGTTTCAGG GCCTCCTTGA GTGATACAAT GGCATTATGG 
GAGTCCCTTC AGCAGCAGGG AGAAGCCCAG CTACTCCAGG CGGCAGAGGA GAAGTTCACC 
ATTGAGCCAT TTAAAGCCAA ATCCCCAAAG GATGTGGAAG ACCTGGATCG TCTCGTGCAG 
ACCCAGAGGC TGAGAAACCC CTCAGAAGAT GCAGCCAAGG ATCTTCCTGC CATCCGGGAC 
CTTAAGAAGC TAGAGTTTGC GTTGGGCCCC ATCTTGGGCC CCCAGGCTTT CCCCACACTG 
GCAAAGATCC TTCCAGCCTT CTCTTCTCTG CAACACCTGG ACCTGGACTC ACTTAGTGAG 
AACAAGATCG GAGACAAGGG TGTGTCGAAG CTCTCAGCCA CCTTCCCTCA GCTGAAGGCC 
CTGGAGACGC TCAACTTGTC CCAAAACAAC ATCACTGATG TGGGTGCCTG CAAGCTTGCA 
GAAGCTCTGC CAGCCCTAGC CAAGTCCCTC CTAAGGCTGA GCTTGTACAA TAACTGCATC 
TGTGACAAAG GAGCCAAGAG CCTGGCACAA GTACTTCCGG ACATGGTGTC CCTGCGTGTG 
ATGGATGTCC AGTTCAACAA GTTCACGGCT GCCGGTGCCC AGCAACTGGC CTCCAGCCTT 
CAGAAGTGCC CTCAGGTGGA AACACTGGCA ATGTGGACAC CCACTATCCC CTTTGGGGTT 
CAGGAACACC TGCAGCAGCT GGATGCCAGG ATCAGTCTGA GATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Ciita ( XM_006521725.3 ) cDNA ORF clone, Mus musculus(house mouse) -> XP_006521788.1 Mus musculus class II transactivator (Ciita), transcript variant X2, mRNA.

Price & Availability↑

CloneID	OMu51824
Clone ID Related Accession (Same CDS sequence)	XM_006521725.3 , XM_011245810.3 , XM_011245810.2 , NM_001302619.1
Accession Version	XM_006521725.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3165bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-06-21
Organism	Mus musculus(house mouse)
Product	MHC class II transactivator isoform X2
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000082.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 22, 2016 this sequence version replaced XM_006521725.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGATCTGG GATCTCCAGA GGGCAGCTAC CTGGAACTCC TTAACAGTGA TGCCGACCCC 
CTACATCTCT ACCACCTCTA TGACCAGATG GACCTGGCTG GGGAGGAGGA GATCGAACTC 
AGCTCAGAGC CAGACACAGA TACCATCAAC TGCGACCAGT TCAGCAAGCT GTTGCAGGAC 
ATGGAACTGG ATGAAGAGAC CCGGGAGGCC TATGCCAACA TTGCGGAACT GGATCAGTAC 
GTGTTCCAGG ATACCCAGCT CGAGGGCCTG AGCAAGGACC TCTTCATAGA GCACATTGGA 
GCAGAGGAAG GCTTTGGTGA GAACATAGAG ATCCCTGTAG AAGCAGGACA GAAGCCTCAG 
AAGAGACGCT TCCCGGAAGA GCATGCTATG GACTCAAAGC ACAGGAAGCT AGTGCCCACC 
TCTAGGACCT CACTGAACTA TTTGGATCTC CCCACTGGGC ACATCCAGAT CTTCACCACT 
CTGCCCCAGG GACTCTGGCA AATCTCAGGG GCTGGCACAG GTCTCTCCAG TGTCCTAATC 
TACCACGGTG AGATGCCCCA GGTCAACCAA GTGCTCCCTT CAAGCAGCCT CAGTATCCCC 
AGTCTCCCCG AGTCCCCAGA CCGGCCTGGC TCCACCAGCC CCTTCACACC ATCTGCAGCT 
GACCTGCCCA GCATGCCCGA ACCTGCGCTG ACCTCCCGTG TAAATGAGAC AGAGGACACA 
TCTCCCTCCC CATGCCAAGA GGGTCCCGAG TCTTCCATCA AGCTTCCAAA ATGGCCAGAG 
GCTGTGGAGC GATTCCAGCA CTCCCTACAG GACAAATACA AGGCATTGCC CCAGAGCCCA 
AGGGGTCCTC TGGTGGCCGT GGAGCTGGTA CGGGCCAGGC TGGAAAGAGG CAGCAACAAG 
AGCCAGGAAA GGGAGCTGGC CACTCCCGAC TGGACAGAGC GCCAGCTAGC CCACGGTGGT 
CTGGCAGAGG TACTTCAGGT TGTCAGTGAC TGCAGGCGAC CAGGAGAGAC ACAGGTGGTC 
GCTGTGCTGG GCAAGGCTGG CCAGGGAAAG AGCCACTGGG CCAGGACAGT GAGTCACACC 
TGGGCATGTG GCCAGTTGCT ACAATATGAC TTTGTCTTCT ATGTCCCCTG TCATTGCTTG 
GATCGTCCCG GGGACACCTA CCACCTGCGG GATCTGCTCT GTCCCCCGAG CCTGCAGCCA 
CTGGCCATGG ATGACGAGGT CCTTGATTAT ATCGTGAGGC AGCCAGACCG TGTTCTGCTC 
ATCCTAGATG CTTTCGAGGA GCTAGAGGCC CAAGATGGCC TCCTGCACGG ACCCTGTGGA 
TCTCTGTCCC CAGAGCCCTG CTCCCTCCGA GGACTGCTGG CTGGGATCTT CCAGCGGAAG 
CTACTGCGAG GCTGCACACT GCTCCTCACA GCCCGGCCCC GGGGCCGCCT GGCTCAGAGC 
CTGAGCAAGG CAGATGCCAT CTTTGAGGTG CCCAGCTTCT CTACCAAGCA GGCCAAGACT 
TACATGAGGC ACTACTTTGA GAACTCAGGG ACAGCGGGGA ACCAAGACAA GGCCCTGGGC 
CTCCTGGAGG GCCAGCCTCT TCTCTGCAGC TATAGTCACA GCCCTGTTGT GTGCAGGGCT 
GTGTGCCAGC TCTCCAAGGC CCTGCTAGAA CAGGGCACAG AGGCCCAGCT ACCTTGTACA 
CTTACAGGAC TCTATGTCAG CCTGCTAGGT CCTGCAGCTC AGAACAGTCC TCCCGGAGCC 
TTAGTCGAGC TGGCCAAGCT GGCCTGGGAG CTGGGACGAA GACACCAAAG CACCTTGCAA 
GAAACCCGGT TTTCATCCGT GGAGGTGAAA ACCTGGGCAG TGACCCAAGG CTTGATGCAG 
CAGACCCTGG AGACCACGGA GGCTCAACTG GCCTTCTCCA GTTTTCTGCT ACAGTGTTTC 
CTGGGTGCTG TGTGGCTGGC ACAGTGCAAT GAAATCAAAG ACAAGGAGCT GCCACAGTAC 
CTGGCCTTGA CTCCGAGGAA GAAGAGACCC TATGACAACT GGCTGGAGGG TGTACCACGC 
TTTCTGGCTG GATTAGTTTT CCAGCCTCGA GCCCACTGCC TGGGAGCTCT GGTGGAGCCT 
GCAGTGGCTG CAGTGGCGGA TAGGAAACAG AAGGTTCTTA CCAGGTACCT GAAGCGCCTG 
AAGCTGGGGA CACTCCGGGC AGGGAGGCTG CTGGAGCTGC TCCACTGTGC CCACGAGACA 
CAGCAACCTG GGATATGGGA GCATGTTGCA CACCAGCTCC CTGGCCACCT CTCCTTCCTG 
GGCACCCGGC TCACACCCCC AGATGTGTAT GTGCTGGGCA GGGCCTTGGA GACAGCCAGC 
CAGGACTTCT CCTTGGACCT TCGTCAGACT GGCGTTGAGC CTTCTGGACT GGGAAACCTC 
GTGGGACTCA GCTGTGTCAC CAGTTTCAGG GCCTCCTTGA GTGATACAAT GGCATTATGG 
GAGTCCCTTC AGCAGCAGGG AGAAGCCCAG CTACTCCAGG CGGCAGAGGA GAAGTTCACC 
ATTGAGCCAT TTAAAGCCAA ATCCCCAAAG GATGTGGAAG ACCTGGATCG TCTCGTGCAG 
ACCCAGAGGC TGAGAAACCC CTCAGAAGAT GCAGCCAAGG ATCTTCCTGC CATCCGGGAC 
CTTAAGAAGC TAGAGTTTGC GTTGGGCCCC ATCTTGGGCC CCCAGGCTTT CCCCACACTG 
GCAAAGATCC TTCCAGCCTT CTCTTCTCTG CAACACCTGG ACCTGGACTC ACTTAGTGAG 
AACAAGATCG GAGACAAGGG TGTGTCGAAG CTCTCAGCCA CCTTCCCTCA GCTGAAGGCC 
CTGGAGACGC TCAACTTGTC CCAAAACAAC ATCACTGATG TGGGTGCCTG CAAGCTTGCA 
GAAGCTCTGC CAGCCCTAGC CAAGTCCCTC CTAAGGCTGA GCTTGTACAA TAACTGCATC 
TGTGACAAAG GAGCCAAGAG CCTGGCACAA GTACTTCCGG ACATGGTGTC CCTGCGTGTG 
ATGGATGTCC AGTTCAACAA GTTCACGGCT GCCGGTGCCC AGCAACTGGC CTCCAGCCTT 
CAGAAGTGCC CTCAGGTGGA AACACTGGCA ATGTGGACAC CCACTATCCC CTTTGGGGTT 
CAGGAACACC TGCAGCAGCT GGATGCCAGG ATCAGTCTGA GATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_006521788.1
CDS	371..3535
Translation	MDLGSPEGSYLELLNSDADPLHLYHLYDQMDLAGEEEIELSSEPDTDTINCDQFSKLLQDMELDEETREAYANIAELDQYVFQDTQLEGLSKDLFIEHIGAEEGFGENIEIPVEAGQKPQKRRFPEEHAMDSKHRKLVPTSRTSLNYLDLPTGHIQIFTTLPQGLWQISGAGTGLSSVLIYHGEMPQVNQVLPSSSLSIPSLPESPDRPGSTSPFTPSAADLPSMPEPALTSRVNETEDTSPSPCQEGPESSIKLPKWPEAVERFQHSLQDKYKALPQSPRGPLVAVELVRARLERGSNKSQERELATPDWTERQLAHGGLAEVLQVVSDCRRPGETQVVAVLGKAGQGKSHWARTVSHTWACGQLLQYDFVFYVPCHCLDRPGDTYHLRDLLCPPSLQPLAMDDEVLDYIVRQPDRVLLILDAFEELEAQDGLLHGPCGSLSPEPCSLRGLLAGIFQRKLLRGCTLLLTARPRGRLAQSLSKADAIFEVPSFSTKQAKTYMRHYFENSGTAGNQDKALGLLEGQPLLCSYSHSPVVCRAVCQLSKALLEQGTEAQLPCTLTGLYVSLLGPAAQNSPPGALVELAKLAWELGRRHQSTLQETRFSSVEVKTWAVTQGLMQQTLETTEAQLAFSSFLLQCFLGAVWLAQCNEIKDKELPQYLALTPRKKRPYDNWLEGVPRFLAGLVFQPRAHCLGALVEPAVAAVADRKQKVLTRYLKRLKLGTLRAGRLLELLHCAHETQQPGIWEHVAHQLPGHLSFLGTRLTPPDVYVLGRALETASQDFSLDLRQTGVEPSGLGNLVGLSCVTSFRASLSDTMALWESLQQQGEAQLLQAAEEKFTIEPFKAKSPKDVEDLDRLVQTQRLRNPSEDAAKDLPAIRDLKKLEFALGPILGPQAFPTLAKILPAFSSLQHLDLDSLSENKIGDKGVSKLSATFPQLKALETLNLSQNNITDVGACKLAEALPALAKSLLRLSLYNNCICDKGAKSLAQVLPDMVSLRVMDVQFNKFTAAGAQQLASSLQKCPQVETLAMWTPTIPFGVQEHLQQLDARISLR

Target ORF information:

RefSeq Version	XM_006521725.3
Organism	Mus musculus(house mouse)
Definition	Mus musculus class II transactivator (Ciita), transcript variant X2, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_006521725.3

ORF Insert Sequence:

ATGGATCTGG GATCTCCAGA GGGCAGCTAC CTGGAACTCC TTAACAGTGA TGCCGACCCC 
CTACATCTCT ACCACCTCTA TGACCAGATG GACCTGGCTG GGGAGGAGGA GATCGAACTC 
AGCTCAGAGC CAGACACAGA TACCATCAAC TGCGACCAGT TCAGCAAGCT GTTGCAGGAC 
ATGGAACTGG ATGAAGAGAC CCGGGAGGCC TATGCCAACA TTGCGGAACT GGATCAGTAC 
GTGTTCCAGG ATACCCAGCT CGAGGGCCTG AGCAAGGACC TCTTCATAGA GCACATTGGA 
GCAGAGGAAG GCTTTGGTGA GAACATAGAG ATCCCTGTAG AAGCAGGACA GAAGCCTCAG 
AAGAGACGCT TCCCGGAAGA GCATGCTATG GACTCAAAGC ACAGGAAGCT AGTGCCCACC 
TCTAGGACCT CACTGAACTA TTTGGATCTC CCCACTGGGC ACATCCAGAT CTTCACCACT 
CTGCCCCAGG GACTCTGGCA AATCTCAGGG GCTGGCACAG GTCTCTCCAG TGTCCTAATC 
TACCACGGTG AGATGCCCCA GGTCAACCAA GTGCTCCCTT CAAGCAGCCT CAGTATCCCC 
AGTCTCCCCG AGTCCCCAGA CCGGCCTGGC TCCACCAGCC CCTTCACACC ATCTGCAGCT 
GACCTGCCCA GCATGCCCGA ACCTGCGCTG ACCTCCCGTG TAAATGAGAC AGAGGACACA 
TCTCCCTCCC CATGCCAAGA GGGTCCCGAG TCTTCCATCA AGCTTCCAAA ATGGCCAGAG 
GCTGTGGAGC GATTCCAGCA CTCCCTACAG GACAAATACA AGGCATTGCC CCAGAGCCCA 
AGGGGTCCTC TGGTGGCCGT GGAGCTGGTA CGGGCCAGGC TGGAAAGAGG CAGCAACAAG 
AGCCAGGAAA GGGAGCTGGC CACTCCCGAC TGGACAGAGC GCCAGCTAGC CCACGGTGGT 
CTGGCAGAGG TACTTCAGGT TGTCAGTGAC TGCAGGCGAC CAGGAGAGAC ACAGGTGGTC 
GCTGTGCTGG GCAAGGCTGG CCAGGGAAAG AGCCACTGGG CCAGGACAGT GAGTCACACC 
TGGGCATGTG GCCAGTTGCT ACAATATGAC TTTGTCTTCT ATGTCCCCTG TCATTGCTTG 
GATCGTCCCG GGGACACCTA CCACCTGCGG GATCTGCTCT GTCCCCCGAG CCTGCAGCCA 
CTGGCCATGG ATGACGAGGT CCTTGATTAT ATCGTGAGGC AGCCAGACCG TGTTCTGCTC 
ATCCTAGATG CTTTCGAGGA GCTAGAGGCC CAAGATGGCC TCCTGCACGG ACCCTGTGGA 
TCTCTGTCCC CAGAGCCCTG CTCCCTCCGA GGACTGCTGG CTGGGATCTT CCAGCGGAAG 
CTACTGCGAG GCTGCACACT GCTCCTCACA GCCCGGCCCC GGGGCCGCCT GGCTCAGAGC 
CTGAGCAAGG CAGATGCCAT CTTTGAGGTG CCCAGCTTCT CTACCAAGCA GGCCAAGACT 
TACATGAGGC ACTACTTTGA GAACTCAGGG ACAGCGGGGA ACCAAGACAA GGCCCTGGGC 
CTCCTGGAGG GCCAGCCTCT TCTCTGCAGC TATAGTCACA GCCCTGTTGT GTGCAGGGCT 
GTGTGCCAGC TCTCCAAGGC CCTGCTAGAA CAGGGCACAG AGGCCCAGCT ACCTTGTACA 
CTTACAGGAC TCTATGTCAG CCTGCTAGGT CCTGCAGCTC AGAACAGTCC TCCCGGAGCC 
TTAGTCGAGC TGGCCAAGCT GGCCTGGGAG CTGGGACGAA GACACCAAAG CACCTTGCAA 
GAAACCCGGT TTTCATCCGT GGAGGTGAAA ACCTGGGCAG TGACCCAAGG CTTGATGCAG 
CAGACCCTGG AGACCACGGA GGCTCAACTG GCCTTCTCCA GTTTTCTGCT ACAGTGTTTC 
CTGGGTGCTG TGTGGCTGGC ACAGTGCAAT GAAATCAAAG ACAAGGAGCT GCCACAGTAC 
CTGGCCTTGA CTCCGAGGAA GAAGAGACCC TATGACAACT GGCTGGAGGG TGTACCACGC 
TTTCTGGCTG GATTAGTTTT CCAGCCTCGA GCCCACTGCC TGGGAGCTCT GGTGGAGCCT 
GCAGTGGCTG CAGTGGCGGA TAGGAAACAG AAGGTTCTTA CCAGGTACCT GAAGCGCCTG 
AAGCTGGGGA CACTCCGGGC AGGGAGGCTG CTGGAGCTGC TCCACTGTGC CCACGAGACA 
CAGCAACCTG GGATATGGGA GCATGTTGCA CACCAGCTCC CTGGCCACCT CTCCTTCCTG 
GGCACCCGGC TCACACCCCC AGATGTGTAT GTGCTGGGCA GGGCCTTGGA GACAGCCAGC 
CAGGACTTCT CCTTGGACCT TCGTCAGACT GGCGTTGAGC CTTCTGGACT GGGAAACCTC 
GTGGGACTCA GCTGTGTCAC CAGTTTCAGG GCCTCCTTGA GTGATACAAT GGCATTATGG 
GAGTCCCTTC AGCAGCAGGG AGAAGCCCAG CTACTCCAGG CGGCAGAGGA GAAGTTCACC 
ATTGAGCCAT TTAAAGCCAA ATCCCCAAAG GATGTGGAAG ACCTGGATCG TCTCGTGCAG 
ACCCAGAGGC TGAGAAACCC CTCAGAAGAT GCAGCCAAGG ATCTTCCTGC CATCCGGGAC 
CTTAAGAAGC TAGAGTTTGC GTTGGGCCCC ATCTTGGGCC CCCAGGCTTT CCCCACACTG 
GCAAAGATCC TTCCAGCCTT CTCTTCTCTG CAACACCTGG ACCTGGACTC ACTTAGTGAG 
AACAAGATCG GAGACAAGGG TGTGTCGAAG CTCTCAGCCA CCTTCCCTCA GCTGAAGGCC 
CTGGAGACGC TCAACTTGTC CCAAAACAAC ATCACTGATG TGGGTGCCTG CAAGCTTGCA 
GAAGCTCTGC CAGCCCTAGC CAAGTCCCTC CTAAGGCTGA GCTTGTACAA TAACTGCATC 
TGTGACAAAG GAGCCAAGAG CCTGGCACAA GTACTTCCGG ACATGGTGTC CCTGCGTGTG 
ATGGATGTCC AGTTCAACAA GTTCACGGCT GCCGGTGCCC AGCAACTGGC CTCCAGCCTT 
CAGAAGTGCC CTCAGGTGGA AACACTGGCA ATGTGGACAC CCACTATCCC CTTTGGGGTT 
CAGGAACACC TGCAGCAGCT GGATGCCAGG ATCAGTCTGA GATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Ciita ( XM_011245810.2 ) cDNA ORF clone, Mus musculus(house mouse) -> XP_011244112.1 Mus musculus class II transactivator (Ciita), transcript variant X3, mRNA.

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CloneID	OMu51824
Clone ID Related Accession (Same CDS sequence)	XM_006521725.3 , XM_011245810.3 , XM_011245810.2 , NM_001302619.1
Accession Version	XM_011245810.2	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3165bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-06-21
Organism	Mus musculus(house mouse)
Product	MHC class II transactivator isoform X2
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000082.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 22, 2016 this sequence version replaced XM_011245810.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGATCTGG GATCTCCAGA GGGCAGCTAC CTGGAACTCC TTAACAGTGA TGCCGACCCC 
CTACATCTCT ACCACCTCTA TGACCAGATG GACCTGGCTG GGGAGGAGGA GATCGAACTC 
AGCTCAGAGC CAGACACAGA TACCATCAAC TGCGACCAGT TCAGCAAGCT GTTGCAGGAC 
ATGGAACTGG ATGAAGAGAC CCGGGAGGCC TATGCCAACA TTGCGGAACT GGATCAGTAC 
GTGTTCCAGG ATACCCAGCT CGAGGGCCTG AGCAAGGACC TCTTCATAGA GCACATTGGA 
GCAGAGGAAG GCTTTGGTGA GAACATAGAG ATCCCTGTAG AAGCAGGACA GAAGCCTCAG 
AAGAGACGCT TCCCGGAAGA GCATGCTATG GACTCAAAGC ACAGGAAGCT AGTGCCCACC 
TCTAGGACCT CACTGAACTA TTTGGATCTC CCCACTGGGC ACATCCAGAT CTTCACCACT 
CTGCCCCAGG GACTCTGGCA AATCTCAGGG GCTGGCACAG GTCTCTCCAG TGTCCTAATC 
TACCACGGTG AGATGCCCCA GGTCAACCAA GTGCTCCCTT CAAGCAGCCT CAGTATCCCC 
AGTCTCCCCG AGTCCCCAGA CCGGCCTGGC TCCACCAGCC CCTTCACACC ATCTGCAGCT 
GACCTGCCCA GCATGCCCGA ACCTGCGCTG ACCTCCCGTG TAAATGAGAC AGAGGACACA 
TCTCCCTCCC CATGCCAAGA GGGTCCCGAG TCTTCCATCA AGCTTCCAAA ATGGCCAGAG 
GCTGTGGAGC GATTCCAGCA CTCCCTACAG GACAAATACA AGGCATTGCC CCAGAGCCCA 
AGGGGTCCTC TGGTGGCCGT GGAGCTGGTA CGGGCCAGGC TGGAAAGAGG CAGCAACAAG 
AGCCAGGAAA GGGAGCTGGC CACTCCCGAC TGGACAGAGC GCCAGCTAGC CCACGGTGGT 
CTGGCAGAGG TACTTCAGGT TGTCAGTGAC TGCAGGCGAC CAGGAGAGAC ACAGGTGGTC 
GCTGTGCTGG GCAAGGCTGG CCAGGGAAAG AGCCACTGGG CCAGGACAGT GAGTCACACC 
TGGGCATGTG GCCAGTTGCT ACAATATGAC TTTGTCTTCT ATGTCCCCTG TCATTGCTTG 
GATCGTCCCG GGGACACCTA CCACCTGCGG GATCTGCTCT GTCCCCCGAG CCTGCAGCCA 
CTGGCCATGG ATGACGAGGT CCTTGATTAT ATCGTGAGGC AGCCAGACCG TGTTCTGCTC 
ATCCTAGATG CTTTCGAGGA GCTAGAGGCC CAAGATGGCC TCCTGCACGG ACCCTGTGGA 
TCTCTGTCCC CAGAGCCCTG CTCCCTCCGA GGACTGCTGG CTGGGATCTT CCAGCGGAAG 
CTACTGCGAG GCTGCACACT GCTCCTCACA GCCCGGCCCC GGGGCCGCCT GGCTCAGAGC 
CTGAGCAAGG CAGATGCCAT CTTTGAGGTG CCCAGCTTCT CTACCAAGCA GGCCAAGACT 
TACATGAGGC ACTACTTTGA GAACTCAGGG ACAGCGGGGA ACCAAGACAA GGCCCTGGGC 
CTCCTGGAGG GCCAGCCTCT TCTCTGCAGC TATAGTCACA GCCCTGTTGT GTGCAGGGCT 
GTGTGCCAGC TCTCCAAGGC CCTGCTAGAA CAGGGCACAG AGGCCCAGCT ACCTTGTACA 
CTTACAGGAC TCTATGTCAG CCTGCTAGGT CCTGCAGCTC AGAACAGTCC TCCCGGAGCC 
TTAGTCGAGC TGGCCAAGCT GGCCTGGGAG CTGGGACGAA GACACCAAAG CACCTTGCAA 
GAAACCCGGT TTTCATCCGT GGAGGTGAAA ACCTGGGCAG TGACCCAAGG CTTGATGCAG 
CAGACCCTGG AGACCACGGA GGCTCAACTG GCCTTCTCCA GTTTTCTGCT ACAGTGTTTC 
CTGGGTGCTG TGTGGCTGGC ACAGTGCAAT GAAATCAAAG ACAAGGAGCT GCCACAGTAC 
CTGGCCTTGA CTCCGAGGAA GAAGAGACCC TATGACAACT GGCTGGAGGG TGTACCACGC 
TTTCTGGCTG GATTAGTTTT CCAGCCTCGA GCCCACTGCC TGGGAGCTCT GGTGGAGCCT 
GCAGTGGCTG CAGTGGCGGA TAGGAAACAG AAGGTTCTTA CCAGGTACCT GAAGCGCCTG 
AAGCTGGGGA CACTCCGGGC AGGGAGGCTG CTGGAGCTGC TCCACTGTGC CCACGAGACA 
CAGCAACCTG GGATATGGGA GCATGTTGCA CACCAGCTCC CTGGCCACCT CTCCTTCCTG 
GGCACCCGGC TCACACCCCC AGATGTGTAT GTGCTGGGCA GGGCCTTGGA GACAGCCAGC 
CAGGACTTCT CCTTGGACCT TCGTCAGACT GGCGTTGAGC CTTCTGGACT GGGAAACCTC 
GTGGGACTCA GCTGTGTCAC CAGTTTCAGG GCCTCCTTGA GTGATACAAT GGCATTATGG 
GAGTCCCTTC AGCAGCAGGG AGAAGCCCAG CTACTCCAGG CGGCAGAGGA GAAGTTCACC 
ATTGAGCCAT TTAAAGCCAA ATCCCCAAAG GATGTGGAAG ACCTGGATCG TCTCGTGCAG 
ACCCAGAGGC TGAGAAACCC CTCAGAAGAT GCAGCCAAGG ATCTTCCTGC CATCCGGGAC 
CTTAAGAAGC TAGAGTTTGC GTTGGGCCCC ATCTTGGGCC CCCAGGCTTT CCCCACACTG 
GCAAAGATCC TTCCAGCCTT CTCTTCTCTG CAACACCTGG ACCTGGACTC ACTTAGTGAG 
AACAAGATCG GAGACAAGGG TGTGTCGAAG CTCTCAGCCA CCTTCCCTCA GCTGAAGGCC 
CTGGAGACGC TCAACTTGTC CCAAAACAAC ATCACTGATG TGGGTGCCTG CAAGCTTGCA 
GAAGCTCTGC CAGCCCTAGC CAAGTCCCTC CTAAGGCTGA GCTTGTACAA TAACTGCATC 
TGTGACAAAG GAGCCAAGAG CCTGGCACAA GTACTTCCGG ACATGGTGTC CCTGCGTGTG 
ATGGATGTCC AGTTCAACAA GTTCACGGCT GCCGGTGCCC AGCAACTGGC CTCCAGCCTT 
CAGAAGTGCC CTCAGGTGGA AACACTGGCA ATGTGGACAC CCACTATCCC CTTTGGGGTT 
CAGGAACACC TGCAGCAGCT GGATGCCAGG ATCAGTCTGA GATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_011244112.1
CDS	451..3615
Translation	MDLGSPEGSYLELLNSDADPLHLYHLYDQMDLAGEEEIELSSEPDTDTINCDQFSKLLQDMELDEETREAYANIAELDQYVFQDTQLEGLSKDLFIEHIGAEEGFGENIEIPVEAGQKPQKRRFPEEHAMDSKHRKLVPTSRTSLNYLDLPTGHIQIFTTLPQGLWQISGAGTGLSSVLIYHGEMPQVNQVLPSSSLSIPSLPESPDRPGSTSPFTPSAADLPSMPEPALTSRVNETEDTSPSPCQEGPESSIKLPKWPEAVERFQHSLQDKYKALPQSPRGPLVAVELVRARLERGSNKSQERELATPDWTERQLAHGGLAEVLQVVSDCRRPGETQVVAVLGKAGQGKSHWARTVSHTWACGQLLQYDFVFYVPCHCLDRPGDTYHLRDLLCPPSLQPLAMDDEVLDYIVRQPDRVLLILDAFEELEAQDGLLHGPCGSLSPEPCSLRGLLAGIFQRKLLRGCTLLLTARPRGRLAQSLSKADAIFEVPSFSTKQAKTYMRHYFENSGTAGNQDKALGLLEGQPLLCSYSHSPVVCRAVCQLSKALLEQGTEAQLPCTLTGLYVSLLGPAAQNSPPGALVELAKLAWELGRRHQSTLQETRFSSVEVKTWAVTQGLMQQTLETTEAQLAFSSFLLQCFLGAVWLAQCNEIKDKELPQYLALTPRKKRPYDNWLEGVPRFLAGLVFQPRAHCLGALVEPAVAAVADRKQKVLTRYLKRLKLGTLRAGRLLELLHCAHETQQPGIWEHVAHQLPGHLSFLGTRLTPPDVYVLGRALETASQDFSLDLRQTGVEPSGLGNLVGLSCVTSFRASLSDTMALWESLQQQGEAQLLQAAEEKFTIEPFKAKSPKDVEDLDRLVQTQRLRNPSEDAAKDLPAIRDLKKLEFALGPILGPQAFPTLAKILPAFSSLQHLDLDSLSENKIGDKGVSKLSATFPQLKALETLNLSQNNITDVGACKLAEALPALAKSLLRLSLYNNCICDKGAKSLAQVLPDMVSLRVMDVQFNKFTAAGAQQLASSLQKCPQVETLAMWTPTIPFGVQEHLQQLDARISLR

Target ORF information:

RefSeq Version	XM_011245810.2
Organism	Mus musculus(house mouse)
Definition	Mus musculus class II transactivator (Ciita), transcript variant X3, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_011245810.2

ORF Insert Sequence:

ATGGATCTGG GATCTCCAGA GGGCAGCTAC CTGGAACTCC TTAACAGTGA TGCCGACCCC 
CTACATCTCT ACCACCTCTA TGACCAGATG GACCTGGCTG GGGAGGAGGA GATCGAACTC 
AGCTCAGAGC CAGACACAGA TACCATCAAC TGCGACCAGT TCAGCAAGCT GTTGCAGGAC 
ATGGAACTGG ATGAAGAGAC CCGGGAGGCC TATGCCAACA TTGCGGAACT GGATCAGTAC 
GTGTTCCAGG ATACCCAGCT CGAGGGCCTG AGCAAGGACC TCTTCATAGA GCACATTGGA 
GCAGAGGAAG GCTTTGGTGA GAACATAGAG ATCCCTGTAG AAGCAGGACA GAAGCCTCAG 
AAGAGACGCT TCCCGGAAGA GCATGCTATG GACTCAAAGC ACAGGAAGCT AGTGCCCACC 
TCTAGGACCT CACTGAACTA TTTGGATCTC CCCACTGGGC ACATCCAGAT CTTCACCACT 
CTGCCCCAGG GACTCTGGCA AATCTCAGGG GCTGGCACAG GTCTCTCCAG TGTCCTAATC 
TACCACGGTG AGATGCCCCA GGTCAACCAA GTGCTCCCTT CAAGCAGCCT CAGTATCCCC 
AGTCTCCCCG AGTCCCCAGA CCGGCCTGGC TCCACCAGCC CCTTCACACC ATCTGCAGCT 
GACCTGCCCA GCATGCCCGA ACCTGCGCTG ACCTCCCGTG TAAATGAGAC AGAGGACACA 
TCTCCCTCCC CATGCCAAGA GGGTCCCGAG TCTTCCATCA AGCTTCCAAA ATGGCCAGAG 
GCTGTGGAGC GATTCCAGCA CTCCCTACAG GACAAATACA AGGCATTGCC CCAGAGCCCA 
AGGGGTCCTC TGGTGGCCGT GGAGCTGGTA CGGGCCAGGC TGGAAAGAGG CAGCAACAAG 
AGCCAGGAAA GGGAGCTGGC CACTCCCGAC TGGACAGAGC GCCAGCTAGC CCACGGTGGT 
CTGGCAGAGG TACTTCAGGT TGTCAGTGAC TGCAGGCGAC CAGGAGAGAC ACAGGTGGTC 
GCTGTGCTGG GCAAGGCTGG CCAGGGAAAG AGCCACTGGG CCAGGACAGT GAGTCACACC 
TGGGCATGTG GCCAGTTGCT ACAATATGAC TTTGTCTTCT ATGTCCCCTG TCATTGCTTG 
GATCGTCCCG GGGACACCTA CCACCTGCGG GATCTGCTCT GTCCCCCGAG CCTGCAGCCA 
CTGGCCATGG ATGACGAGGT CCTTGATTAT ATCGTGAGGC AGCCAGACCG TGTTCTGCTC 
ATCCTAGATG CTTTCGAGGA GCTAGAGGCC CAAGATGGCC TCCTGCACGG ACCCTGTGGA 
TCTCTGTCCC CAGAGCCCTG CTCCCTCCGA GGACTGCTGG CTGGGATCTT CCAGCGGAAG 
CTACTGCGAG GCTGCACACT GCTCCTCACA GCCCGGCCCC GGGGCCGCCT GGCTCAGAGC 
CTGAGCAAGG CAGATGCCAT CTTTGAGGTG CCCAGCTTCT CTACCAAGCA GGCCAAGACT 
TACATGAGGC ACTACTTTGA GAACTCAGGG ACAGCGGGGA ACCAAGACAA GGCCCTGGGC 
CTCCTGGAGG GCCAGCCTCT TCTCTGCAGC TATAGTCACA GCCCTGTTGT GTGCAGGGCT 
GTGTGCCAGC TCTCCAAGGC CCTGCTAGAA CAGGGCACAG AGGCCCAGCT ACCTTGTACA 
CTTACAGGAC TCTATGTCAG CCTGCTAGGT CCTGCAGCTC AGAACAGTCC TCCCGGAGCC 
TTAGTCGAGC TGGCCAAGCT GGCCTGGGAG CTGGGACGAA GACACCAAAG CACCTTGCAA 
GAAACCCGGT TTTCATCCGT GGAGGTGAAA ACCTGGGCAG TGACCCAAGG CTTGATGCAG 
CAGACCCTGG AGACCACGGA GGCTCAACTG GCCTTCTCCA GTTTTCTGCT ACAGTGTTTC 
CTGGGTGCTG TGTGGCTGGC ACAGTGCAAT GAAATCAAAG ACAAGGAGCT GCCACAGTAC 
CTGGCCTTGA CTCCGAGGAA GAAGAGACCC TATGACAACT GGCTGGAGGG TGTACCACGC 
TTTCTGGCTG GATTAGTTTT CCAGCCTCGA GCCCACTGCC TGGGAGCTCT GGTGGAGCCT 
GCAGTGGCTG CAGTGGCGGA TAGGAAACAG AAGGTTCTTA CCAGGTACCT GAAGCGCCTG 
AAGCTGGGGA CACTCCGGGC AGGGAGGCTG CTGGAGCTGC TCCACTGTGC CCACGAGACA 
CAGCAACCTG GGATATGGGA GCATGTTGCA CACCAGCTCC CTGGCCACCT CTCCTTCCTG 
GGCACCCGGC TCACACCCCC AGATGTGTAT GTGCTGGGCA GGGCCTTGGA GACAGCCAGC 
CAGGACTTCT CCTTGGACCT TCGTCAGACT GGCGTTGAGC CTTCTGGACT GGGAAACCTC 
GTGGGACTCA GCTGTGTCAC CAGTTTCAGG GCCTCCTTGA GTGATACAAT GGCATTATGG 
GAGTCCCTTC AGCAGCAGGG AGAAGCCCAG CTACTCCAGG CGGCAGAGGA GAAGTTCACC 
ATTGAGCCAT TTAAAGCCAA ATCCCCAAAG GATGTGGAAG ACCTGGATCG TCTCGTGCAG 
ACCCAGAGGC TGAGAAACCC CTCAGAAGAT GCAGCCAAGG ATCTTCCTGC CATCCGGGAC 
CTTAAGAAGC TAGAGTTTGC GTTGGGCCCC ATCTTGGGCC CCCAGGCTTT CCCCACACTG 
GCAAAGATCC TTCCAGCCTT CTCTTCTCTG CAACACCTGG ACCTGGACTC ACTTAGTGAG 
AACAAGATCG GAGACAAGGG TGTGTCGAAG CTCTCAGCCA CCTTCCCTCA GCTGAAGGCC 
CTGGAGACGC TCAACTTGTC CCAAAACAAC ATCACTGATG TGGGTGCCTG CAAGCTTGCA 
GAAGCTCTGC CAGCCCTAGC CAAGTCCCTC CTAAGGCTGA GCTTGTACAA TAACTGCATC 
TGTGACAAAG GAGCCAAGAG CCTGGCACAA GTACTTCCGG ACATGGTGTC CCTGCGTGTG 
ATGGATGTCC AGTTCAACAA GTTCACGGCT GCCGGTGCCC AGCAACTGGC CTCCAGCCTT 
CAGAAGTGCC CTCAGGTGGA AACACTGGCA ATGTGGACAC CCACTATCCC CTTTGGGGTT 
CAGGAACACC TGCAGCAGCT GGATGCCAGG ATCAGTCTGA GATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Ciita ( NM_007575.4 ) cDNA ORF clone, Mus musculus(house mouse) -> NP_031601.1 Mus musculus class II transactivator (Ciita), transcript variant 2, mRNA.

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CloneID	OMu21731
Clone ID Related Accession (Same CDS sequence)	NM_007575.4
Accession Version	NM_007575.4 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3237bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-09-14
Organism	Mus musculus(house mouse)
Product	MHC class II transactivator isoform 2
Comment	Comment: REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from AK040723.1, AK153609.1, BC107330.1, BE850370.1 and AI182240.1. On Nov 1, 2014 this sequence version replaced NM_007575.3. Transcript Variant: This variant (2) differs in the 5' UTR and uses an alternate start codon compared to variant 4. It encodes isoform 2, which is shorter and has a distinct N-terminus, compared to isoform 4. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## RNAseq introns :: single sample supports all introns SAMN00849375, SAMN00849377 [ECO:0000348] ##Evidence-Data-END##

ATGCGCTGCC TGGTTCCTGG CCCTTCTGGG TCTTACCTGC CGGAGTTGCA AGACCATAGT 
CTGTGTGCCA CCATGGATCT GGGATCTCCA GAGGGCAGCT ACCTGGAACT CCTTAACAGT 
GATGCCGACC CCCTACATCT CTACCACCTC TATGACCAGA TGGACCTGGC TGGGGAGGAG 
GAGATCGAAC TCAGCTCAGA GCCAGACACA GATACCATCA ACTGCGACCA GTTCAGCAAG 
CTGTTGCAGG ACATGGAACT GGATGAAGAG ACCCGGGAGG CCTATGCCAA CATTGCGGAA 
CTGGATCAGT ACGTGTTCCA GGATACCCAG CTCGAGGGCC TGAGCAAGGA CCTCTTCATA 
GAGCACATTG GAGCAGAGGA AGGCTTTGGT GAGAACATAG AGATCCCTGT AGAAGCAGGA 
CAGAAGCCTC AGAAGAGACG CTTCCCGGAA GAGCATGCTA TGGACTCAAA GCACAGGAAG 
CTAGTGCCCA CCTCTAGGAC CTCACTGAAC TATTTGGATC TCCCCACTGG GCACATCCAG 
ATCTTCACCA CTCTGCCCCA GGGACTCTGG CAAATCTCAG GGGCTGGCAC AGGTCTCTCC 
AGTGTCCTAA TCTACCACGG TGAGATGCCC CAGGTCAACC AAGTGCTCCC TTCAAGCAGC 
CTCAGTATCC CCAGTCTCCC CGAGTCCCCA GACCGGCCTG GCTCCACCAG CCCCTTCACA 
CCATCTGCAG CTGACCTGCC CAGCATGCCC GAACCTGCGC TGACCTCCCG TGTAAATGAG 
ACAGAGGACA CATCTCCCTC CCCATGCCAA GAGGGTCCCG AGTCTTCCAT CAAGCTTCCA 
AAATGGCCAG AGGCTGTGGA GCGATTCCAG CACTCCCTAC AGGACAAATA CAAGGCATTG 
CCCCAGAGCC CAAGGGGTCC TCTGGTGGCC GTGGAGCTGG TACGGGCCAG GCTGGAAAGA 
GGCAGCAACA AGAGCCAGGA AAGGGAGCTG GCCACTCCCG ACTGGACAGA GCGCCAGCTA 
GCCCACGGTG GTCTGGCAGA GGTACTTCAG GTTGTCAGTG ACTGCAGGCG ACCAGGAGAG 
ACACAGGTGG TCGCTGTGCT GGGCAAGGCT GGCCAGGGAA AGAGCCACTG GGCCAGGACA 
GTGAGTCACA CCTGGGCATG TGGCCAGTTG CTACAATATG ACTTTGTCTT CTATGTCCCC 
TGTCATTGCT TGGATCGTCC CGGGGACACC TACCACCTGC GGGATCTGCT CTGTCCCCCG 
AGCCTGCAGC CACTGGCCAT GGATGACGAG GTCCTTGATT ATATCGTGAG GCAGCCAGAC 
CGTGTTCTGC TCATCCTAGA TGCTTTCGAG GAGCTAGAGG CCCAAGATGG CCTCCTGCAC 
GGACCCTGTG GATCTCTGTC CCCAGAGCCC TGCTCCCTCC GAGGACTGCT GGCTGGGATC 
TTCCAGCGGA AGCTACTGCG AGGCTGCACA CTGCTCCTCA CAGCCCGGCC CCGGGGCCGC 
CTGGCTCAGA GCCTGAGCAA GGCAGATGCC ATCTTTGAGG TGCCCAGCTT CTCTACCAAG 
CAGGCCAAGA CTTACATGAG GCACTACTTT GAGAACTCAG GGACAGCGGG GAACCAAGAC 
AAGGCCCTGG GCCTCCTGGA GGGCCAGCCT CTTCTCTGCA GCTATAGTCA CAGCCCTGTT 
GTGTGCAGGG CTGTGTGCCA GCTCTCCAAG GCCCTGCTAG AACAGGGCAC AGAGGCCCAG 
CTACCTTGTA CACTTACAGG ACTCTATGTC AGCCTGCTAG GTCCTGCAGC TCAGAACAGT 
CCTCCCGGAG CCTTAGTCGA GCTGGCCAAG CTGGCCTGGG AGCTGGGACG AAGACACCAA 
AGCACCTTGC AAGAAACCCG GTTTTCATCC GTGGAGGTGA AAACCTGGGC AGTGACCCAA 
GGCTTGATGC AGCAGACCCT GGAGACCACG GAGGCTCAAC TGGCCTTCTC CAGTTTTCTG 
CTACAGTGTT TCCTGGGTGC TGTGTGGCTG GCACAGTGCA ATGAAATCAA AGACAAGGAG 
CTGCCACAGT ACCTGGCCTT GACTCCGAGG AAGAAGAGAC CCTATGACAA CTGGCTGGAG 
GGTGTACCAC GCTTTCTGGC TGGATTAGTT TTCCAGCCTC GAGCCCACTG CCTGGGAGCT 
CTGGTGGAGC CTGCAGTGGC TGCAGTGGCG GATAGGAAAC AGAAGGTTCT TACCAGGTAC 
CTGAAGCGCC TGAAGCTGGG GACACTCCGG GCAGGGAGGC TGCTGGAGCT GCTCCACTGT 
GCCCACGAGA CACAGCAACC TGGGATATGG GAGCATGTTG CACACCAGCT CCCTGGCCAC 
CTCTCCTTCC TGGGCACCCG GCTCACACCC CCAGATGTGT ATGTGCTGGG CAGGGCCTTG 
GAGACAGCCA GCCAGGACTT CTCCTTGGAC CTTCGTCAGA CTGGCGTTGA GCCTTCTGGA 
CTGGGAAACC TCGTGGGACT CAGCTGTGTC ACCAGTTTCA GGGCCTCCTT GAGTGATACA 
ATGGCATTAT GGGAGTCCCT TCAGCAGCAG GGAGAAGCCC AGCTACTCCA GGCGGCAGAG 
GAGAAGTTCA CCATTGAGCC ATTTAAAGCC AAATCCCCAA AGGATGTGGA AGACCTGGAT 
CGTCTCGTGC AGACCCAGAG GCTGAGAAAC CCCTCAGAAG ATGCAGCCAA GGATCTTCCT 
GCCATCCGGG ACCTTAAGAA GCTAGAGTTT GCGTTGGGCC CCATCTTGGG CCCCCAGGCT 
TTCCCCACAC TGGCAAAGAT CCTTCCAGCC TTCTCTTCTC TGCAACACCT GGACCTGGAC 
TCACTTAGTG AGAACAAGAT CGGAGACAAG GGTGTGTCGA AGCTCTCAGC CACCTTCCCT 
CAGCTGAAGG CCCTGGAGAC GCTCAACTTG TCCCAAAACA ACATCACTGA TGTGGGTGCC 
TGCAAGCTTG CAGAAGCTCT GCCAGCCCTA GCCAAGTCCC TCCTAAGGCT GAGCTTGTAC 
AATAACTGCA TCTGTGACAA AGGAGCCAAG AGCCTGGCAC AAGTACTTCC GGACATGGTG 
TCCCTGCGTG TGATGGATGT CCAGTTCAAC AAGTTCACGG CTGCCGGTGC CCAGCAACTG 
GCCTCCAGCC TTCAGAAGTG CCCTCAGGTG GAAACACTGG CAATGTGGAC ACCCACTATC 
CCCTTTGGGG TTCAGGAACA CCTGCAGCAG CTGGATGCCA GGATCAGTCT GAGATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_031601.1
CDS	196..3432
Translation	MRCLVPGPSGSYLPELQDHSLCATMDLGSPEGSYLELLNSDADPLHLYHLYDQMDLAGEEEIELSSEPDTDTINCDQFSKLLQDMELDEETREAYANIAELDQYVFQDTQLEGLSKDLFIEHIGAEEGFGENIEIPVEAGQKPQKRRFPEEHAMDSKHRKLVPTSRTSLNYLDLPTGHIQIFTTLPQGLWQISGAGTGLSSVLIYHGEMPQVNQVLPSSSLSIPSLPESPDRPGSTSPFTPSAADLPSMPEPALTSRVNETEDTSPSPCQEGPESSIKLPKWPEAVERFQHSLQDKYKALPQSPRGPLVAVELVRARLERGSNKSQERELATPDWTERQLAHGGLAEVLQVVSDCRRPGETQVVAVLGKAGQGKSHWARTVSHTWACGQLLQYDFVFYVPCHCLDRPGDTYHLRDLLCPPSLQPLAMDDEVLDYIVRQPDRVLLILDAFEELEAQDGLLHGPCGSLSPEPCSLRGLLAGIFQRKLLRGCTLLLTARPRGRLAQSLSKADAIFEVPSFSTKQAKTYMRHYFENSGTAGNQDKALGLLEGQPLLCSYSHSPVVCRAVCQLSKALLEQGTEAQLPCTLTGLYVSLLGPAAQNSPPGALVELAKLAWELGRRHQSTLQETRFSSVEVKTWAVTQGLMQQTLETTEAQLAFSSFLLQCFLGAVWLAQCNEIKDKELPQYLALTPRKKRPYDNWLEGVPRFLAGLVFQPRAHCLGALVEPAVAAVADRKQKVLTRYLKRLKLGTLRAGRLLELLHCAHETQQPGIWEHVAHQLPGHLSFLGTRLTPPDVYVLGRALETASQDFSLDLRQTGVEPSGLGNLVGLSCVTSFRASLSDTMALWESLQQQGEAQLLQAAEEKFTIEPFKAKSPKDVEDLDRLVQTQRLRNPSEDAAKDLPAIRDLKKLEFALGPILGPQAFPTLAKILPAFSSLQHLDLDSLSENKIGDKGVSKLSATFPQLKALETLNLSQNNITDVGACKLAEALPALAKSLLRLSLYNNCICDKGAKSLAQVLPDMVSLRVMDVQFNKFTAAGAQQLASSLQKCPQVETLAMWTPTIPFGVQEHLQQLDARISLR

Target ORF information:

RefSeq Version	NM_007575.4
Organism	Mus musculus(house mouse)
Definition	Mus musculus class II transactivator (Ciita), transcript variant 2, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_007575.4

ORF Insert Sequence:

ATGCGCTGCC TGGTTCCTGG CCCTTCTGGG TCTTACCTGC CGGAGTTGCA AGACCATAGT 
CTGTGTGCCA CCATGGATCT GGGATCTCCA GAGGGCAGCT ACCTGGAACT CCTTAACAGT 
GATGCCGACC CCCTACATCT CTACCACCTC TATGACCAGA TGGACCTGGC TGGGGAGGAG 
GAGATCGAAC TCAGCTCAGA GCCAGACACA GATACCATCA ACTGCGACCA GTTCAGCAAG 
CTGTTGCAGG ACATGGAACT GGATGAAGAG ACCCGGGAGG CCTATGCCAA CATTGCGGAA 
CTGGATCAGT ACGTGTTCCA GGATACCCAG CTCGAGGGCC TGAGCAAGGA CCTCTTCATA 
GAGCACATTG GAGCAGAGGA AGGCTTTGGT GAGAACATAG AGATCCCTGT AGAAGCAGGA 
CAGAAGCCTC AGAAGAGACG CTTCCCGGAA GAGCATGCTA TGGACTCAAA GCACAGGAAG 
CTAGTGCCCA CCTCTAGGAC CTCACTGAAC TATTTGGATC TCCCCACTGG GCACATCCAG 
ATCTTCACCA CTCTGCCCCA GGGACTCTGG CAAATCTCAG GGGCTGGCAC AGGTCTCTCC 
AGTGTCCTAA TCTACCACGG TGAGATGCCC CAGGTCAACC AAGTGCTCCC TTCAAGCAGC 
CTCAGTATCC CCAGTCTCCC CGAGTCCCCA GACCGGCCTG GCTCCACCAG CCCCTTCACA 
CCATCTGCAG CTGACCTGCC CAGCATGCCC GAACCTGCGC TGACCTCCCG TGTAAATGAG 
ACAGAGGACA CATCTCCCTC CCCATGCCAA GAGGGTCCCG AGTCTTCCAT CAAGCTTCCA 
AAATGGCCAG AGGCTGTGGA GCGATTCCAG CACTCCCTAC AGGACAAATA CAAGGCATTG 
CCCCAGAGCC CAAGGGGTCC TCTGGTGGCC GTGGAGCTGG TACGGGCCAG GCTGGAAAGA 
GGCAGCAACA AGAGCCAGGA AAGGGAGCTG GCCACTCCCG ACTGGACAGA GCGCCAGCTA 
GCCCACGGTG GTCTGGCAGA GGTACTTCAG GTTGTCAGTG ACTGCAGGCG ACCAGGAGAG 
ACACAGGTGG TCGCTGTGCT GGGCAAGGCT GGCCAGGGAA AGAGCCACTG GGCCAGGACA 
GTGAGTCACA CCTGGGCATG TGGCCAGTTG CTACAATATG ACTTTGTCTT CTATGTCCCC 
TGTCATTGCT TGGATCGTCC CGGGGACACC TACCACCTGC GGGATCTGCT CTGTCCCCCG 
AGCCTGCAGC CACTGGCCAT GGATGACGAG GTCCTTGATT ATATCGTGAG GCAGCCAGAC 
CGTGTTCTGC TCATCCTAGA TGCTTTCGAG GAGCTAGAGG CCCAAGATGG CCTCCTGCAC 
GGACCCTGTG GATCTCTGTC CCCAGAGCCC TGCTCCCTCC GAGGACTGCT GGCTGGGATC 
TTCCAGCGGA AGCTACTGCG AGGCTGCACA CTGCTCCTCA CAGCCCGGCC CCGGGGCCGC 
CTGGCTCAGA GCCTGAGCAA GGCAGATGCC ATCTTTGAGG TGCCCAGCTT CTCTACCAAG 
CAGGCCAAGA CTTACATGAG GCACTACTTT GAGAACTCAG GGACAGCGGG GAACCAAGAC 
AAGGCCCTGG GCCTCCTGGA GGGCCAGCCT CTTCTCTGCA GCTATAGTCA CAGCCCTGTT 
GTGTGCAGGG CTGTGTGCCA GCTCTCCAAG GCCCTGCTAG AACAGGGCAC AGAGGCCCAG 
CTACCTTGTA CACTTACAGG ACTCTATGTC AGCCTGCTAG GTCCTGCAGC TCAGAACAGT 
CCTCCCGGAG CCTTAGTCGA GCTGGCCAAG CTGGCCTGGG AGCTGGGACG AAGACACCAA 
AGCACCTTGC AAGAAACCCG GTTTTCATCC GTGGAGGTGA AAACCTGGGC AGTGACCCAA 
GGCTTGATGC AGCAGACCCT GGAGACCACG GAGGCTCAAC TGGCCTTCTC CAGTTTTCTG 
CTACAGTGTT TCCTGGGTGC TGTGTGGCTG GCACAGTGCA ATGAAATCAA AGACAAGGAG 
CTGCCACAGT ACCTGGCCTT GACTCCGAGG AAGAAGAGAC CCTATGACAA CTGGCTGGAG 
GGTGTACCAC GCTTTCTGGC TGGATTAGTT TTCCAGCCTC GAGCCCACTG CCTGGGAGCT 
CTGGTGGAGC CTGCAGTGGC TGCAGTGGCG GATAGGAAAC AGAAGGTTCT TACCAGGTAC 
CTGAAGCGCC TGAAGCTGGG GACACTCCGG GCAGGGAGGC TGCTGGAGCT GCTCCACTGT 
GCCCACGAGA CACAGCAACC TGGGATATGG GAGCATGTTG CACACCAGCT CCCTGGCCAC 
CTCTCCTTCC TGGGCACCCG GCTCACACCC CCAGATGTGT ATGTGCTGGG CAGGGCCTTG 
GAGACAGCCA GCCAGGACTT CTCCTTGGAC CTTCGTCAGA CTGGCGTTGA GCCTTCTGGA 
CTGGGAAACC TCGTGGGACT CAGCTGTGTC ACCAGTTTCA GGGCCTCCTT GAGTGATACA 
ATGGCATTAT GGGAGTCCCT TCAGCAGCAG GGAGAAGCCC AGCTACTCCA GGCGGCAGAG 
GAGAAGTTCA CCATTGAGCC ATTTAAAGCC AAATCCCCAA AGGATGTGGA AGACCTGGAT 
CGTCTCGTGC AGACCCAGAG GCTGAGAAAC CCCTCAGAAG ATGCAGCCAA GGATCTTCCT 
GCCATCCGGG ACCTTAAGAA GCTAGAGTTT GCGTTGGGCC CCATCTTGGG CCCCCAGGCT 
TTCCCCACAC TGGCAAAGAT CCTTCCAGCC TTCTCTTCTC TGCAACACCT GGACCTGGAC 
TCACTTAGTG AGAACAAGAT CGGAGACAAG GGTGTGTCGA AGCTCTCAGC CACCTTCCCT 
CAGCTGAAGG CCCTGGAGAC GCTCAACTTG TCCCAAAACA ACATCACTGA TGTGGGTGCC 
TGCAAGCTTG CAGAAGCTCT GCCAGCCCTA GCCAAGTCCC TCCTAAGGCT GAGCTTGTAC 
AATAACTGCA TCTGTGACAA AGGAGCCAAG AGCCTGGCAC AAGTACTTCC GGACATGGTG 
TCCCTGCGTG TGATGGATGT CCAGTTCAAC AAGTTCACGG CTGCCGGTGC CCAGCAACTG 
GCCTCCAGCC TTCAGAAGTG CCCTCAGGTG GAAACACTGG CAATGTGGAC ACCCACTATC 
CCCTTTGGGG TTCAGGAACA CCTGCAGCAG CTGGATGCCA GGATCAGTCT GAGATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Ciita ( NM_001302618.1 ) cDNA ORF clone, Mus musculus(house mouse) -> NP_001289547.1 Mus musculus class II transactivator (Ciita), transcript variant 4, mRNA.

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CloneID	OMu67229
Clone ID Related Accession (Same CDS sequence)	NM_001302618.1
Accession Version	NM_001302618.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3468bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-10-24
Organism	Mus musculus(house mouse)
Product	MHC class II transactivator isoform 4
Comment	Comment: REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from AK143956.1, AK138822.1, AK153609.1, BC107330.1, BE850370.1 and AI182240.1. Transcript Variant: This variant (4) represents the longest transcript and encodes the longest isoform (4). Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## RNAseq introns :: single sample supports all introns SAMN00849374, SAMN00849375 [ECO:0000348] ##Evidence-Data-END##

ATGAACCACT TCCAGGCCAT CCTGGCCCAA GTACAGACAC TGCTCTCCAG CCAGAAGCCC 
AGGCAGGTGC GGGCCCTCCT GGATGGCCTG CTGGAAGAAG AGCTGCTCTC ACGGGAATAC 
CACTGTGCCT TGCTGCATGA GCCTGATGGT GATGCCCTGG CCCGGAAGAT TTCCCTGACC 
CTGCTGGAGA AAGGGGACTT AGACTTGACT TTCTTGAGCT GGGTCTGCAA CAGTCTGCAG 
GCTCCCACGG TAGAGAGGGG CACCAGCTAC AGGGACCATG GAGACCATAG TCTGTGTGCC 
ACCATGGATC TGGGATCTCC AGAGGGCAGC TACCTGGAAC TCCTTAACAG TGATGCCGAC 
CCCCTACATC TCTACCACCT CTATGACCAG ATGGACCTGG CTGGGGAGGA GGAGATCGAA 
CTCAGCTCAG AGCCAGACAC AGATACCATC AACTGCGACC AGTTCAGCAA GCTGTTGCAG 
GACATGGAAC TGGATGAAGA GACCCGGGAG GCCTATGCCA ACATTGCGGA ACTGGATCAG 
TACGTGTTCC AGGATACCCA GCTCGAGGGC CTGAGCAAGG ACCTCTTCAT AGAGCACATT 
GGAGCAGAGG AAGGCTTTGG TGAGAACATA GAGATCCCTG TAGAAGCAGG ACAGAAGCCT 
CAGAAGAGAC GCTTCCCGGA AGAGCATGCT ATGGACTCAA AGCACAGGAA GCTAGTGCCC 
ACCTCTAGGA CCTCACTGAA CTATTTGGAT CTCCCCACTG GGCACATCCA GATCTTCACC 
ACTCTGCCCC AGGGACTCTG GCAAATCTCA GGGGCTGGCA CAGGTCTCTC CAGTGTCCTA 
ATCTACCACG GTGAGATGCC CCAGGTCAAC CAAGTGCTCC CTTCAAGCAG CCTCAGTATC 
CCCAGTCTCC CCGAGTCCCC AGACCGGCCT GGCTCCACCA GCCCCTTCAC ACCATCTGCA 
GCTGACCTGC CCAGCATGCC CGAACCTGCG CTGACCTCCC GTGTAAATGA GACAGAGGAC 
ACATCTCCCT CCCCATGCCA AGAGGGTCCC GAGTCTTCCA TCAAGCTTCC AAAATGGCCA 
GAGGCTGTGG AGCGATTCCA GCACTCCCTA CAGGACAAAT ACAAGGCATT GCCCCAGAGC 
CCAAGGGGTC CTCTGGTGGC CGTGGAGCTG GTACGGGCCA GGCTGGAAAG AGGCAGCAAC 
AAGAGCCAGG AAAGGGAGCT GGCCACTCCC GACTGGACAG AGCGCCAGCT AGCCCACGGT 
GGTCTGGCAG AGGTACTTCA GGTTGTCAGT GACTGCAGGC GACCAGGAGA GACACAGGTG 
GTCGCTGTGC TGGGCAAGGC TGGCCAGGGA AAGAGCCACT GGGCCAGGAC AGTGAGTCAC 
ACCTGGGCAT GTGGCCAGTT GCTACAATAT GACTTTGTCT TCTATGTCCC CTGTCATTGC 
TTGGATCGTC CCGGGGACAC CTACCACCTG CGGGATCTGC TCTGTCCCCC GAGCCTGCAG 
CCACTGGCCA TGGATGACGA GGTCCTTGAT TATATCGTGA GGCAGCCAGA CCGTGTTCTG 
CTCATCCTAG ATGCTTTCGA GGAGCTAGAG GCCCAAGATG GCCTCCTGCA CGGACCCTGT 
GGATCTCTGT CCCCAGAGCC CTGCTCCCTC CGAGGACTGC TGGCTGGGAT CTTCCAGCGG 
AAGCTACTGC GAGGCTGCAC ACTGCTCCTC ACAGCCCGGC CCCGGGGCCG CCTGGCTCAG 
AGCCTGAGCA AGGCAGATGC CATCTTTGAG GTGCCCAGCT TCTCTACCAA GCAGGCCAAG 
ACTTACATGA GGCACTACTT TGAGAACTCA GGGACAGCGG GGAACCAAGA CAAGGCCCTG 
GGCCTCCTGG AGGGCCAGCC TCTTCTCTGC AGCTATAGTC ACAGCCCTGT TGTGTGCAGG 
GCTGTGTGCC AGCTCTCCAA GGCCCTGCTA GAACAGGGCA CAGAGGCCCA GCTACCTTGT 
ACACTTACAG GACTCTATGT CAGCCTGCTA GGTCCTGCAG CTCAGAACAG TCCTCCCGGA 
GCCTTAGTCG AGCTGGCCAA GCTGGCCTGG GAGCTGGGAC GAAGACACCA AAGCACCTTG 
CAAGAAACCC GGTTTTCATC CGTGGAGGTG AAAACCTGGG CAGTGACCCA AGGCTTGATG 
CAGCAGACCC TGGAGACCAC GGAGGCTCAA CTGGCCTTCT CCAGTTTTCT GCTACAGTGT 
TTCCTGGGTG CTGTGTGGCT GGCACAGTGC AATGAAATCA AAGACAAGGA GCTGCCACAG 
TACCTGGCCT TGACTCCGAG GAAGAAGAGA CCCTATGACA ACTGGCTGGA GGGTGTACCA 
CGCTTTCTGG CTGGATTAGT TTTCCAGCCT CGAGCCCACT GCCTGGGAGC TCTGGTGGAG 
CCTGCAGTGG CTGCAGTGGC GGATAGGAAA CAGAAGGTTC TTACCAGGTA CCTGAAGCGC 
CTGAAGCTGG GGACACTCCG GGCAGGGAGG CTGCTGGAGC TGCTCCACTG TGCCCACGAG 
ACACAGCAAC CTGGGATATG GGAGCATGTT GCACACCAGC TCCCTGGCCA CCTCTCCTTC 
CTGGGCACCC GGCTCACACC CCCAGATGTG TATGTGCTGG GCAGGGCCTT GGAGACAGCC 
AGCCAGGACT TCTCCTTGGA CCTTCGTCAG ACTGGCGTTG AGCCTTCTGG ACTGGGAAAC 
CTCGTGGGAC TCAGCTGTGT CACCAGTTTC AGGGCCTCCT TGAGTGATAC AATGGCATTA 
TGGGAGTCCC TTCAGCAGCA GGGAGAAGCC CAGCTACTCC AGGCGGCAGA GGAGAAGTTC 
ACCATTGAGC CATTTAAAGC CAAATCCCCA AAGGATGTGG AAGACCTGGA TCGTCTCGTG 
CAGACCCAGA GGCTGAGAAA CCCCTCAGAA GATGCAGCCA AGGATCTTCC TGCCATCCGG 
GACCTTAAGA AGCTAGAGTT TGCGTTGGGC CCCATCTTGG GCCCCCAGGC TTTCCCCACA 
CTGGCAAAGA TCCTTCCAGC CTTCTCTTCT CTGCAACACC TGGACCTGGA CTCACTTAGT 
GAGAACAAGA TCGGAGACAA GGGTGTGTCG AAGCTCTCAG CCACCTTCCC TCAGCTGAAG 
GCCCTGGAGA CGCTCAACTT GTCCCAAAAC AACATCACTG ATGTGGGTGC CTGCAAGCTT 
GCAGAAGCTC TGCCAGCCCT AGCCAAGTCC CTCCTAAGGC TGAGCTTGTA CAATAACTGC 
ATCTGTGACA AAGGAGCCAA GAGCCTGGCA CAAGTACTTC CGGACATGGT GTCCCTGCGT 
GTGATGGATG TCCAGTTCAA CAAGTTCACG GCTGCCGGTG CCCAGCAACT GGCCTCCAGC 
CTTCAGAAGT GCCCTCAGGT GGAAACACTG GCAATGTGGA CACCCACTAT CCCCTTTGGG 
GTTCAGGAAC ACCTGCAGCA GCTGGATGCC AGGATCAGTC TGAGATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001289547.1
CDS	73..3540
Translation	MNHFQAILAQVQTLLSSQKPRQVRALLDGLLEEELLSREYHCALLHEPDGDALARKISLTLLEKGDLDLTFLSWVCNSLQAPTVERGTSYRDHGDHSLCATMDLGSPEGSYLELLNSDADPLHLYHLYDQMDLAGEEEIELSSEPDTDTINCDQFSKLLQDMELDEETREAYANIAELDQYVFQDTQLEGLSKDLFIEHIGAEEGFGENIEIPVEAGQKPQKRRFPEEHAMDSKHRKLVPTSRTSLNYLDLPTGHIQIFTTLPQGLWQISGAGTGLSSVLIYHGEMPQVNQVLPSSSLSIPSLPESPDRPGSTSPFTPSAADLPSMPEPALTSRVNETEDTSPSPCQEGPESSIKLPKWPEAVERFQHSLQDKYKALPQSPRGPLVAVELVRARLERGSNKSQERELATPDWTERQLAHGGLAEVLQVVSDCRRPGETQVVAVLGKAGQGKSHWARTVSHTWACGQLLQYDFVFYVPCHCLDRPGDTYHLRDLLCPPSLQPLAMDDEVLDYIVRQPDRVLLILDAFEELEAQDGLLHGPCGSLSPEPCSLRGLLAGIFQRKLLRGCTLLLTARPRGRLAQSLSKADAIFEVPSFSTKQAKTYMRHYFENSGTAGNQDKALGLLEGQPLLCSYSHSPVVCRAVCQLSKALLEQGTEAQLPCTLTGLYVSLLGPAAQNSPPGALVELAKLAWELGRRHQSTLQETRFSSVEVKTWAVTQGLMQQTLETTEAQLAFSSFLLQCFLGAVWLAQCNEIKDKELPQYLALTPRKKRPYDNWLEGVPRFLAGLVFQPRAHCLGALVEPAVAAVADRKQKVLTRYLKRLKLGTLRAGRLLELLHCAHETQQPGIWEHVAHQLPGHLSFLGTRLTPPDVYVLGRALETASQDFSLDLRQTGVEPSGLGNLVGLSCVTSFRASLSDTMALWESLQQQGEAQLLQAAEEKFTIEPFKAKSPKDVEDLDRLVQTQRLRNPSEDAAKDLPAIRDLKKLEFALGPILGPQAFPTLAKILPAFSSLQHLDLDSLSENKIGDKGVSKLSATFPQLKALETLNLSQNNITDVGACKLAEALPALAKSLLRLSLYNNCICDKGAKSLAQVLPDMVSLRVMDVQFNKFTAAGAQQLASSLQKCPQVETLAMWTPTIPFGVQEHLQQLDARISLR

Target ORF information:

RefSeq Version	NM_001302618.1
Organism	Mus musculus(house mouse)
Definition	Mus musculus class II transactivator (Ciita), transcript variant 4, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001302618.1

ORF Insert Sequence:

ATGAACCACT TCCAGGCCAT CCTGGCCCAA GTACAGACAC TGCTCTCCAG CCAGAAGCCC 
AGGCAGGTGC GGGCCCTCCT GGATGGCCTG CTGGAAGAAG AGCTGCTCTC ACGGGAATAC 
CACTGTGCCT TGCTGCATGA GCCTGATGGT GATGCCCTGG CCCGGAAGAT TTCCCTGACC 
CTGCTGGAGA AAGGGGACTT AGACTTGACT TTCTTGAGCT GGGTCTGCAA CAGTCTGCAG 
GCTCCCACGG TAGAGAGGGG CACCAGCTAC AGGGACCATG GAGACCATAG TCTGTGTGCC 
ACCATGGATC TGGGATCTCC AGAGGGCAGC TACCTGGAAC TCCTTAACAG TGATGCCGAC 
CCCCTACATC TCTACCACCT CTATGACCAG ATGGACCTGG CTGGGGAGGA GGAGATCGAA 
CTCAGCTCAG AGCCAGACAC AGATACCATC AACTGCGACC AGTTCAGCAA GCTGTTGCAG 
GACATGGAAC TGGATGAAGA GACCCGGGAG GCCTATGCCA ACATTGCGGA ACTGGATCAG 
TACGTGTTCC AGGATACCCA GCTCGAGGGC CTGAGCAAGG ACCTCTTCAT AGAGCACATT 
GGAGCAGAGG AAGGCTTTGG TGAGAACATA GAGATCCCTG TAGAAGCAGG ACAGAAGCCT 
CAGAAGAGAC GCTTCCCGGA AGAGCATGCT ATGGACTCAA AGCACAGGAA GCTAGTGCCC 
ACCTCTAGGA CCTCACTGAA CTATTTGGAT CTCCCCACTG GGCACATCCA GATCTTCACC 
ACTCTGCCCC AGGGACTCTG GCAAATCTCA GGGGCTGGCA CAGGTCTCTC CAGTGTCCTA 
ATCTACCACG GTGAGATGCC CCAGGTCAAC CAAGTGCTCC CTTCAAGCAG CCTCAGTATC 
CCCAGTCTCC CCGAGTCCCC AGACCGGCCT GGCTCCACCA GCCCCTTCAC ACCATCTGCA 
GCTGACCTGC CCAGCATGCC CGAACCTGCG CTGACCTCCC GTGTAAATGA GACAGAGGAC 
ACATCTCCCT CCCCATGCCA AGAGGGTCCC GAGTCTTCCA TCAAGCTTCC AAAATGGCCA 
GAGGCTGTGG AGCGATTCCA GCACTCCCTA CAGGACAAAT ACAAGGCATT GCCCCAGAGC 
CCAAGGGGTC CTCTGGTGGC CGTGGAGCTG GTACGGGCCA GGCTGGAAAG AGGCAGCAAC 
AAGAGCCAGG AAAGGGAGCT GGCCACTCCC GACTGGACAG AGCGCCAGCT AGCCCACGGT 
GGTCTGGCAG AGGTACTTCA GGTTGTCAGT GACTGCAGGC GACCAGGAGA GACACAGGTG 
GTCGCTGTGC TGGGCAAGGC TGGCCAGGGA AAGAGCCACT GGGCCAGGAC AGTGAGTCAC 
ACCTGGGCAT GTGGCCAGTT GCTACAATAT GACTTTGTCT TCTATGTCCC CTGTCATTGC 
TTGGATCGTC CCGGGGACAC CTACCACCTG CGGGATCTGC TCTGTCCCCC GAGCCTGCAG 
CCACTGGCCA TGGATGACGA GGTCCTTGAT TATATCGTGA GGCAGCCAGA CCGTGTTCTG 
CTCATCCTAG ATGCTTTCGA GGAGCTAGAG GCCCAAGATG GCCTCCTGCA CGGACCCTGT 
GGATCTCTGT CCCCAGAGCC CTGCTCCCTC CGAGGACTGC TGGCTGGGAT CTTCCAGCGG 
AAGCTACTGC GAGGCTGCAC ACTGCTCCTC ACAGCCCGGC CCCGGGGCCG CCTGGCTCAG 
AGCCTGAGCA AGGCAGATGC CATCTTTGAG GTGCCCAGCT TCTCTACCAA GCAGGCCAAG 
ACTTACATGA GGCACTACTT TGAGAACTCA GGGACAGCGG GGAACCAAGA CAAGGCCCTG 
GGCCTCCTGG AGGGCCAGCC TCTTCTCTGC AGCTATAGTC ACAGCCCTGT TGTGTGCAGG 
GCTGTGTGCC AGCTCTCCAA GGCCCTGCTA GAACAGGGCA CAGAGGCCCA GCTACCTTGT 
ACACTTACAG GACTCTATGT CAGCCTGCTA GGTCCTGCAG CTCAGAACAG TCCTCCCGGA 
GCCTTAGTCG AGCTGGCCAA GCTGGCCTGG GAGCTGGGAC GAAGACACCA AAGCACCTTG 
CAAGAAACCC GGTTTTCATC CGTGGAGGTG AAAACCTGGG CAGTGACCCA AGGCTTGATG 
CAGCAGACCC TGGAGACCAC GGAGGCTCAA CTGGCCTTCT CCAGTTTTCT GCTACAGTGT 
TTCCTGGGTG CTGTGTGGCT GGCACAGTGC AATGAAATCA AAGACAAGGA GCTGCCACAG 
TACCTGGCCT TGACTCCGAG GAAGAAGAGA CCCTATGACA ACTGGCTGGA GGGTGTACCA 
CGCTTTCTGG CTGGATTAGT TTTCCAGCCT CGAGCCCACT GCCTGGGAGC TCTGGTGGAG 
CCTGCAGTGG CTGCAGTGGC GGATAGGAAA CAGAAGGTTC TTACCAGGTA CCTGAAGCGC 
CTGAAGCTGG GGACACTCCG GGCAGGGAGG CTGCTGGAGC TGCTCCACTG TGCCCACGAG 
ACACAGCAAC CTGGGATATG GGAGCATGTT GCACACCAGC TCCCTGGCCA CCTCTCCTTC 
CTGGGCACCC GGCTCACACC CCCAGATGTG TATGTGCTGG GCAGGGCCTT GGAGACAGCC 
AGCCAGGACT TCTCCTTGGA CCTTCGTCAG ACTGGCGTTG AGCCTTCTGG ACTGGGAAAC 
CTCGTGGGAC TCAGCTGTGT CACCAGTTTC AGGGCCTCCT TGAGTGATAC AATGGCATTA 
TGGGAGTCCC TTCAGCAGCA GGGAGAAGCC CAGCTACTCC AGGCGGCAGA GGAGAAGTTC 
ACCATTGAGC CATTTAAAGC CAAATCCCCA AAGGATGTGG AAGACCTGGA TCGTCTCGTG 
CAGACCCAGA GGCTGAGAAA CCCCTCAGAA GATGCAGCCA AGGATCTTCC TGCCATCCGG 
GACCTTAAGA AGCTAGAGTT TGCGTTGGGC CCCATCTTGG GCCCCCAGGC TTTCCCCACA 
CTGGCAAAGA TCCTTCCAGC CTTCTCTTCT CTGCAACACC TGGACCTGGA CTCACTTAGT 
GAGAACAAGA TCGGAGACAA GGGTGTGTCG AAGCTCTCAG CCACCTTCCC TCAGCTGAAG 
GCCCTGGAGA CGCTCAACTT GTCCCAAAAC AACATCACTG ATGTGGGTGC CTGCAAGCTT 
GCAGAAGCTC TGCCAGCCCT AGCCAAGTCC CTCCTAAGGC TGAGCTTGTA CAATAACTGC 
ATCTGTGACA AAGGAGCCAA GAGCCTGGCA CAAGTACTTC CGGACATGGT GTCCCTGCGT 
GTGATGGATG TCCAGTTCAA CAAGTTCACG GCTGCCGGTG CCCAGCAACT GGCCTCCAGC 
CTTCAGAAGT GCCCTCAGGT GGAAACACTG GCAATGTGGA CACCCACTAT CCCCTTTGGG 
GTTCAGGAAC ACCTGCAGCA GCTGGATGCC AGGATCAGTC TGAGATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Ciita ( XM_011245810.3 ) cDNA ORF clone, Mus musculus(house mouse) -> XP_011244112.1 Mus musculus class II transactivator (Ciita), transcript variant X3, mRNA.

Price & Availability↑

CloneID	OMu51824
Clone ID Related Accession (Same CDS sequence)	XM_006521725.3 , XM_011245810.3 , XM_011245810.2 , NM_001302619.1
Accession Version	XM_011245810.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3165bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-08-07
Organism	Mus musculus(house mouse)
Product	MHC class II transactivator isoform X3
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000082.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 8, 2019 this sequence version replaced XM_011245810.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGATCTGG GATCTCCAGA GGGCAGCTAC CTGGAACTCC TTAACAGTGA TGCCGACCCC 
CTACATCTCT ACCACCTCTA TGACCAGATG GACCTGGCTG GGGAGGAGGA GATCGAACTC 
AGCTCAGAGC CAGACACAGA TACCATCAAC TGCGACCAGT TCAGCAAGCT GTTGCAGGAC 
ATGGAACTGG ATGAAGAGAC CCGGGAGGCC TATGCCAACA TTGCGGAACT GGATCAGTAC 
GTGTTCCAGG ATACCCAGCT CGAGGGCCTG AGCAAGGACC TCTTCATAGA GCACATTGGA 
GCAGAGGAAG GCTTTGGTGA GAACATAGAG ATCCCTGTAG AAGCAGGACA GAAGCCTCAG 
AAGAGACGCT TCCCGGAAGA GCATGCTATG GACTCAAAGC ACAGGAAGCT AGTGCCCACC 
TCTAGGACCT CACTGAACTA TTTGGATCTC CCCACTGGGC ACATCCAGAT CTTCACCACT 
CTGCCCCAGG GACTCTGGCA AATCTCAGGG GCTGGCACAG GTCTCTCCAG TGTCCTAATC 
TACCACGGTG AGATGCCCCA GGTCAACCAA GTGCTCCCTT CAAGCAGCCT CAGTATCCCC 
AGTCTCCCCG AGTCCCCAGA CCGGCCTGGC TCCACCAGCC CCTTCACACC ATCTGCAGCT 
GACCTGCCCA GCATGCCCGA ACCTGCGCTG ACCTCCCGTG TAAATGAGAC AGAGGACACA 
TCTCCCTCCC CATGCCAAGA GGGTCCCGAG TCTTCCATCA AGCTTCCAAA ATGGCCAGAG 
GCTGTGGAGC GATTCCAGCA CTCCCTACAG GACAAATACA AGGCATTGCC CCAGAGCCCA 
AGGGGTCCTC TGGTGGCCGT GGAGCTGGTA CGGGCCAGGC TGGAAAGAGG CAGCAACAAG 
AGCCAGGAAA GGGAGCTGGC CACTCCCGAC TGGACAGAGC GCCAGCTAGC CCACGGTGGT 
CTGGCAGAGG TACTTCAGGT TGTCAGTGAC TGCAGGCGAC CAGGAGAGAC ACAGGTGGTC 
GCTGTGCTGG GCAAGGCTGG CCAGGGAAAG AGCCACTGGG CCAGGACAGT GAGTCACACC 
TGGGCATGTG GCCAGTTGCT ACAATATGAC TTTGTCTTCT ATGTCCCCTG TCATTGCTTG 
GATCGTCCCG GGGACACCTA CCACCTGCGG GATCTGCTCT GTCCCCCGAG CCTGCAGCCA 
CTGGCCATGG ATGACGAGGT CCTTGATTAT ATCGTGAGGC AGCCAGACCG TGTTCTGCTC 
ATCCTAGATG CTTTCGAGGA GCTAGAGGCC CAAGATGGCC TCCTGCACGG ACCCTGTGGA 
TCTCTGTCCC CAGAGCCCTG CTCCCTCCGA GGACTGCTGG CTGGGATCTT CCAGCGGAAG 
CTACTGCGAG GCTGCACACT GCTCCTCACA GCCCGGCCCC GGGGCCGCCT GGCTCAGAGC 
CTGAGCAAGG CAGATGCCAT CTTTGAGGTG CCCAGCTTCT CTACCAAGCA GGCCAAGACT 
TACATGAGGC ACTACTTTGA GAACTCAGGG ACAGCGGGGA ACCAAGACAA GGCCCTGGGC 
CTCCTGGAGG GCCAGCCTCT TCTCTGCAGC TATAGTCACA GCCCTGTTGT GTGCAGGGCT 
GTGTGCCAGC TCTCCAAGGC CCTGCTAGAA CAGGGCACAG AGGCCCAGCT ACCTTGTACA 
CTTACAGGAC TCTATGTCAG CCTGCTAGGT CCTGCAGCTC AGAACAGTCC TCCCGGAGCC 
TTAGTCGAGC TGGCCAAGCT GGCCTGGGAG CTGGGACGAA GACACCAAAG CACCTTGCAA 
GAAACCCGGT TTTCATCCGT GGAGGTGAAA ACCTGGGCAG TGACCCAAGG CTTGATGCAG 
CAGACCCTGG AGACCACGGA GGCTCAACTG GCCTTCTCCA GTTTTCTGCT ACAGTGTTTC 
CTGGGTGCTG TGTGGCTGGC ACAGTGCAAT GAAATCAAAG ACAAGGAGCT GCCACAGTAC 
CTGGCCTTGA CTCCGAGGAA GAAGAGACCC TATGACAACT GGCTGGAGGG TGTACCACGC 
TTTCTGGCTG GATTAGTTTT CCAGCCTCGA GCCCACTGCC TGGGAGCTCT GGTGGAGCCT 
GCAGTGGCTG CAGTGGCGGA TAGGAAACAG AAGGTTCTTA CCAGGTACCT GAAGCGCCTG 
AAGCTGGGGA CACTCCGGGC AGGGAGGCTG CTGGAGCTGC TCCACTGTGC CCACGAGACA 
CAGCAACCTG GGATATGGGA GCATGTTGCA CACCAGCTCC CTGGCCACCT CTCCTTCCTG 
GGCACCCGGC TCACACCCCC AGATGTGTAT GTGCTGGGCA GGGCCTTGGA GACAGCCAGC 
CAGGACTTCT CCTTGGACCT TCGTCAGACT GGCGTTGAGC CTTCTGGACT GGGAAACCTC 
GTGGGACTCA GCTGTGTCAC CAGTTTCAGG GCCTCCTTGA GTGATACAAT GGCATTATGG 
GAGTCCCTTC AGCAGCAGGG AGAAGCCCAG CTACTCCAGG CGGCAGAGGA GAAGTTCACC 
ATTGAGCCAT TTAAAGCCAA ATCCCCAAAG GATGTGGAAG ACCTGGATCG TCTCGTGCAG 
ACCCAGAGGC TGAGAAACCC CTCAGAAGAT GCAGCCAAGG ATCTTCCTGC CATCCGGGAC 
CTTAAGAAGC TAGAGTTTGC GTTGGGCCCC ATCTTGGGCC CCCAGGCTTT CCCCACACTG 
GCAAAGATCC TTCCAGCCTT CTCTTCTCTG CAACACCTGG ACCTGGACTC ACTTAGTGAG 
AACAAGATCG GAGACAAGGG TGTGTCGAAG CTCTCAGCCA CCTTCCCTCA GCTGAAGGCC 
CTGGAGACGC TCAACTTGTC CCAAAACAAC ATCACTGATG TGGGTGCCTG CAAGCTTGCA 
GAAGCTCTGC CAGCCCTAGC CAAGTCCCTC CTAAGGCTGA GCTTGTACAA TAACTGCATC 
TGTGACAAAG GAGCCAAGAG CCTGGCACAA GTACTTCCGG ACATGGTGTC CCTGCGTGTG 
ATGGATGTCC AGTTCAACAA GTTCACGGCT GCCGGTGCCC AGCAACTGGC CTCCAGCCTT 
CAGAAGTGCC CTCAGGTGGA AACACTGGCA ATGTGGACAC CCACTATCCC CTTTGGGGTT 
CAGGAACACC TGCAGCAGCT GGATGCCAGG ATCAGTCTGA GATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_011244112.1
CDS	419..3583
Translation	MDLGSPEGSYLELLNSDADPLHLYHLYDQMDLAGEEEIELSSEPDTDTINCDQFSKLLQDMELDEETREAYANIAELDQYVFQDTQLEGLSKDLFIEHIGAEEGFGENIEIPVEAGQKPQKRRFPEEHAMDSKHRKLVPTSRTSLNYLDLPTGHIQIFTTLPQGLWQISGAGTGLSSVLIYHGEMPQVNQVLPSSSLSIPSLPESPDRPGSTSPFTPSAADLPSMPEPALTSRVNETEDTSPSPCQEGPESSIKLPKWPEAVERFQHSLQDKYKALPQSPRGPLVAVELVRARLERGSNKSQERELATPDWTERQLAHGGLAEVLQVVSDCRRPGETQVVAVLGKAGQGKSHWARTVSHTWACGQLLQYDFVFYVPCHCLDRPGDTYHLRDLLCPPSLQPLAMDDEVLDYIVRQPDRVLLILDAFEELEAQDGLLHGPCGSLSPEPCSLRGLLAGIFQRKLLRGCTLLLTARPRGRLAQSLSKADAIFEVPSFSTKQAKTYMRHYFENSGTAGNQDKALGLLEGQPLLCSYSHSPVVCRAVCQLSKALLEQGTEAQLPCTLTGLYVSLLGPAAQNSPPGALVELAKLAWELGRRHQSTLQETRFSSVEVKTWAVTQGLMQQTLETTEAQLAFSSFLLQCFLGAVWLAQCNEIKDKELPQYLALTPRKKRPYDNWLEGVPRFLAGLVFQPRAHCLGALVEPAVAAVADRKQKVLTRYLKRLKLGTLRAGRLLELLHCAHETQQPGIWEHVAHQLPGHLSFLGTRLTPPDVYVLGRALETASQDFSLDLRQTGVEPSGLGNLVGLSCVTSFRASLSDTMALWESLQQQGEAQLLQAAEEKFTIEPFKAKSPKDVEDLDRLVQTQRLRNPSEDAAKDLPAIRDLKKLEFALGPILGPQAFPTLAKILPAFSSLQHLDLDSLSENKIGDKGVSKLSATFPQLKALETLNLSQNNITDVGACKLAEALPALAKSLLRLSLYNNCICDKGAKSLAQVLPDMVSLRVMDVQFNKFTAAGAQQLASSLQKCPQVETLAMWTPTIPFGVQEHLQQLDARISLR

Target ORF information:

RefSeq Version	XM_011245810.3
Organism	Mus musculus(house mouse)
Definition	Mus musculus class II transactivator (Ciita), transcript variant X3, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_011245810.3

ORF Insert Sequence:

ATGGATCTGG GATCTCCAGA GGGCAGCTAC CTGGAACTCC TTAACAGTGA TGCCGACCCC 
CTACATCTCT ACCACCTCTA TGACCAGATG GACCTGGCTG GGGAGGAGGA GATCGAACTC 
AGCTCAGAGC CAGACACAGA TACCATCAAC TGCGACCAGT TCAGCAAGCT GTTGCAGGAC 
ATGGAACTGG ATGAAGAGAC CCGGGAGGCC TATGCCAACA TTGCGGAACT GGATCAGTAC 
GTGTTCCAGG ATACCCAGCT CGAGGGCCTG AGCAAGGACC TCTTCATAGA GCACATTGGA 
GCAGAGGAAG GCTTTGGTGA GAACATAGAG ATCCCTGTAG AAGCAGGACA GAAGCCTCAG 
AAGAGACGCT TCCCGGAAGA GCATGCTATG GACTCAAAGC ACAGGAAGCT AGTGCCCACC 
TCTAGGACCT CACTGAACTA TTTGGATCTC CCCACTGGGC ACATCCAGAT CTTCACCACT 
CTGCCCCAGG GACTCTGGCA AATCTCAGGG GCTGGCACAG GTCTCTCCAG TGTCCTAATC 
TACCACGGTG AGATGCCCCA GGTCAACCAA GTGCTCCCTT CAAGCAGCCT CAGTATCCCC 
AGTCTCCCCG AGTCCCCAGA CCGGCCTGGC TCCACCAGCC CCTTCACACC ATCTGCAGCT 
GACCTGCCCA GCATGCCCGA ACCTGCGCTG ACCTCCCGTG TAAATGAGAC AGAGGACACA 
TCTCCCTCCC CATGCCAAGA GGGTCCCGAG TCTTCCATCA AGCTTCCAAA ATGGCCAGAG 
GCTGTGGAGC GATTCCAGCA CTCCCTACAG GACAAATACA AGGCATTGCC CCAGAGCCCA 
AGGGGTCCTC TGGTGGCCGT GGAGCTGGTA CGGGCCAGGC TGGAAAGAGG CAGCAACAAG 
AGCCAGGAAA GGGAGCTGGC CACTCCCGAC TGGACAGAGC GCCAGCTAGC CCACGGTGGT 
CTGGCAGAGG TACTTCAGGT TGTCAGTGAC TGCAGGCGAC CAGGAGAGAC ACAGGTGGTC 
GCTGTGCTGG GCAAGGCTGG CCAGGGAAAG AGCCACTGGG CCAGGACAGT GAGTCACACC 
TGGGCATGTG GCCAGTTGCT ACAATATGAC TTTGTCTTCT ATGTCCCCTG TCATTGCTTG 
GATCGTCCCG GGGACACCTA CCACCTGCGG GATCTGCTCT GTCCCCCGAG CCTGCAGCCA 
CTGGCCATGG ATGACGAGGT CCTTGATTAT ATCGTGAGGC AGCCAGACCG TGTTCTGCTC 
ATCCTAGATG CTTTCGAGGA GCTAGAGGCC CAAGATGGCC TCCTGCACGG ACCCTGTGGA 
TCTCTGTCCC CAGAGCCCTG CTCCCTCCGA GGACTGCTGG CTGGGATCTT CCAGCGGAAG 
CTACTGCGAG GCTGCACACT GCTCCTCACA GCCCGGCCCC GGGGCCGCCT GGCTCAGAGC 
CTGAGCAAGG CAGATGCCAT CTTTGAGGTG CCCAGCTTCT CTACCAAGCA GGCCAAGACT 
TACATGAGGC ACTACTTTGA GAACTCAGGG ACAGCGGGGA ACCAAGACAA GGCCCTGGGC 
CTCCTGGAGG GCCAGCCTCT TCTCTGCAGC TATAGTCACA GCCCTGTTGT GTGCAGGGCT 
GTGTGCCAGC TCTCCAAGGC CCTGCTAGAA CAGGGCACAG AGGCCCAGCT ACCTTGTACA 
CTTACAGGAC TCTATGTCAG CCTGCTAGGT CCTGCAGCTC AGAACAGTCC TCCCGGAGCC 
TTAGTCGAGC TGGCCAAGCT GGCCTGGGAG CTGGGACGAA GACACCAAAG CACCTTGCAA 
GAAACCCGGT TTTCATCCGT GGAGGTGAAA ACCTGGGCAG TGACCCAAGG CTTGATGCAG 
CAGACCCTGG AGACCACGGA GGCTCAACTG GCCTTCTCCA GTTTTCTGCT ACAGTGTTTC 
CTGGGTGCTG TGTGGCTGGC ACAGTGCAAT GAAATCAAAG ACAAGGAGCT GCCACAGTAC 
CTGGCCTTGA CTCCGAGGAA GAAGAGACCC TATGACAACT GGCTGGAGGG TGTACCACGC 
TTTCTGGCTG GATTAGTTTT CCAGCCTCGA GCCCACTGCC TGGGAGCTCT GGTGGAGCCT 
GCAGTGGCTG CAGTGGCGGA TAGGAAACAG AAGGTTCTTA CCAGGTACCT GAAGCGCCTG 
AAGCTGGGGA CACTCCGGGC AGGGAGGCTG CTGGAGCTGC TCCACTGTGC CCACGAGACA 
CAGCAACCTG GGATATGGGA GCATGTTGCA CACCAGCTCC CTGGCCACCT CTCCTTCCTG 
GGCACCCGGC TCACACCCCC AGATGTGTAT GTGCTGGGCA GGGCCTTGGA GACAGCCAGC 
CAGGACTTCT CCTTGGACCT TCGTCAGACT GGCGTTGAGC CTTCTGGACT GGGAAACCTC 
GTGGGACTCA GCTGTGTCAC CAGTTTCAGG GCCTCCTTGA GTGATACAAT GGCATTATGG 
GAGTCCCTTC AGCAGCAGGG AGAAGCCCAG CTACTCCAGG CGGCAGAGGA GAAGTTCACC 
ATTGAGCCAT TTAAAGCCAA ATCCCCAAAG GATGTGGAAG ACCTGGATCG TCTCGTGCAG 
ACCCAGAGGC TGAGAAACCC CTCAGAAGAT GCAGCCAAGG ATCTTCCTGC CATCCGGGAC 
CTTAAGAAGC TAGAGTTTGC GTTGGGCCCC ATCTTGGGCC CCCAGGCTTT CCCCACACTG 
GCAAAGATCC TTCCAGCCTT CTCTTCTCTG CAACACCTGG ACCTGGACTC ACTTAGTGAG 
AACAAGATCG GAGACAAGGG TGTGTCGAAG CTCTCAGCCA CCTTCCCTCA GCTGAAGGCC 
CTGGAGACGC TCAACTTGTC CCAAAACAAC ATCACTGATG TGGGTGCCTG CAAGCTTGCA 
GAAGCTCTGC CAGCCCTAGC CAAGTCCCTC CTAAGGCTGA GCTTGTACAA TAACTGCATC 
TGTGACAAAG GAGCCAAGAG CCTGGCACAA GTACTTCCGG ACATGGTGTC CCTGCGTGTG 
ATGGATGTCC AGTTCAACAA GTTCACGGCT GCCGGTGCCC AGCAACTGGC CTCCAGCCTT 
CAGAAGTGCC CTCAGGTGGA AACACTGGCA ATGTGGACAC CCACTATCCC CTTTGGGGTT 
CAGGAACACC TGCAGCAGCT GGATGCCAGG ATCAGTCTGA GATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Ciita ( XM_006521726.4 ) cDNA ORF clone, Mus musculus(house mouse) -> XP_006521789.1 Mus musculus class II transactivator (Ciita), transcript variant X4, mRNA.

Price & Availability↑

CloneID	OMu51825
Clone ID Related Accession (Same CDS sequence)	XM_006521726.3 , XM_006521726.4
Accession Version	XM_006521726.4 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3165bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-08-07
Organism	Mus musculus(house mouse)
Product	MHC class II transactivator isoform X4
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000082.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 8, 2019 this sequence version replaced XM_006521726.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGAACCACT TCCAGGCCAT CCTGGCCCAA GTACAGACAC TGCTCTCCAG CCAGAAGCCC 
AGGCAGGTGC GGGCCCTCCT GGATGGCCTG CTGGAAGAAG AGCTGCTCTC ACGGGAATAC 
CACTGTGCCT TGCTGCATGA GCCTGATGGT GATGCCCTGG CCCGGAAGAT TTCCCTGACC 
CTGCTGGAGA AAGGGGACTT AGACTTGACT TTCTTGAGCT GGGTCTGCAA CAGTCTGCAG 
GCTCCCACGG TAGAGAGGGG CACCAGCTAC AGGGACCATG GAGACCATAG TCTGTGTGCC 
ACCATGGATC TGGGATCTCC AGAGGGCAGC TACCTGGAAC TCCTTAACAG TGATGCCGAC 
CCCCTACATC TCTACCACCT CTATGACCAG ATGGACCTGG CTGGGGAGGA GGAGATCGAA 
CTCAGCTCAG AGCCAGACAC AGATACCATC AACTGCGACC AGTTCAGCAA GCTGTTGCAG 
GACATGGAAC TGGATGAAGA GACCCGGGAG GCCTATGCCA ACATTGCGGA ACTGGATCAG 
TACGTGTTCC AGGATACCCA GCTCGAGGGC CTGAGCAAGG ACCTCTTCAT AGAGCACATT 
GGAGCAGAGG AAGGCTTTGG TGAGAACATA GAGATCCCTG TAGAAGCAGG ACAGAAGCCT 
CAGAAGAGAC GCTTCCCGGA AGAGCATGCT ATGGACTCAA AGCACAGGAA GCTAGTGCCC 
ACCTCTAGGA CCTCACTGAA CTATTTGGAT CTCCCCACTG GGCACATCCA GATCTTCACC 
ACTCTGCCCC AGGGACTCTG GCAAATCTCA GGGGCTGGCA CAGGTCTCTC CAGTGTCCTA 
ATCTACCACG GTGAGATGCC CCAGGTCAAC CAAGTGCTCC CTTCAAGCAG CCTCAGTATC 
CCCAGTCTCC CCGAGTCCCC AGACCGGCCT GGCTCCACCA GCCCCTTCAC ACCATCTGCA 
GCTGACCTGC CCAGCATGCC CGAACCTGCG CTGACCTCCC GTGTAAATGA GACAGAGGAC 
ACATCTCCCT CCCCATGCCA AGAGGGTCCC GAGTCTTCCA TCAAGCTTCC AAAATGGCCA 
GAGGCTGTGG AGCGATTCCA GCACTCCCTA CAGGACAAAT ACAAGGCATT GCCCCAGAGC 
CCAAGGGGTC CTCTGGTGGC CGTGGAGCTG GTACGGGCCA GGCTGGAAAG AGGCAGCAAC 
AAGAGCCAGG AAAGGGAGCT GGCCACTCCC GACTGGACAG AGCGCCAGCT AGCCCACGGT 
GGTCTGGCAG AGGTACTTCA GGTTGTCAGT GACTGCAGGC GACCAGGAGA GACACAGGTG 
GTCGCTGTGC TGGGCAAGGC TGGCCAGGGA AAGAGCCACT GGGCCAGGAC AGTGAGTCAC 
ACCTGGGCAT GTGGCCAGTT GCTACAATAT GACTTTGTCT TCTATGTCCC CTGTCATTGC 
TTGGATCGTC CCGGGGACAC CTACCACCTG CGGGATCTGC TCTGTCCCCC GAGCCTGCAG 
CCACTGGCCA TGGATGACGA GGTCCTTGAT TATATCGTGA GGCAGCCAGA CCGTGTTCTG 
CTCATCCTAG ATGCTTTCGA GGAGCTAGAG GCCCAAGATG GCCTCCTGCA CGGACCCTGT 
GGATCTCTGT CCCCAGAGCC CTGCTCCCTC CGAGGACTGC TGGCTGGGAT CTTCCAGCGG 
AAGCTACTGC GAGGCTGCAC ACTGCTCCTC ACAGCCCGGC CCCGGGGCCG CCTGGCTCAG 
AGCCTGAGCA AGGCAGATGC CATCTTTGAG GTGCCCAGCT TCTCTACCAA GCAGGCCAAG 
ACTTACATGA GGCACTACTT TGAGAACTCA GGGACAGCGG GGAACCAAGA CAAGGCCCTG 
GGCCTCCTGG AGGGCCAGCC TCTTCTCTGC AGCTATAGTC ACAGCCCTGT TGTGTGCAGG 
GCTGTGTGCC AGCTCTCCAA GGCCCTGCTA GAACAGGGCA CAGAGGCCCA GCTACCTTGT 
ACACTTACAG GACTCTATGT CAGCCTGCTA GGTCCTGCAG CTCAGAACAG TCCTCCCGGA 
GCCTTAGTCG AGCTGGCCAA GCTGGCCTGG GAGCTGGGAC GAAGACACCA AAGCACCTTG 
CAAGAAACCC GGTTTTCATC CGTGGAGGTG AAAACCTGGG CAGTGACCCA AGGCTTGATG 
CAGCAGACCC TGGAGACCAC GGAGGCTCAA CTGGCCTTCT CCAGTTTTCT GCTACAGTGT 
TTCCTGGGTG CTGTGTGGCT GGCACAGTGC AATGAAATCA AAGACAAGGA GCTGCCACAG 
TACCTGGCCT TGACTCCGAG GAAGAAGAGA CCCTATGACA ACTGGCTGGA GGGTGTACCA 
CGCTTTCTGG CTGGATTAGT TTTCCAGCCT CGAGCCCACT GCCTGGGAGC TCTGGTGGAG 
CCTGCAGTGG CTGCAGTGGC GGATAGGAAA CAGAAGGTTC TTACCAGGTA CCTGAAGCGC 
CTGAAGCTGG GGACACTCCG GGCAGGGAGG CTGCTGGAGC TGCTCCACTG TGCCCACGAG 
ACACAGCAAC CTGGGATATG GGAGCATGTT GCACACCAGC TCCCTGGCCA CCTCTCCTTC 
CTGGGCACCC GGCTCACACC CCCAGATGTG TATGTGCTGG GCAGGGCCTT GGAGACAGCC 
AGCCAGGACT TCTCCTTGGA CCTTCGTCAG ACTGGCGTTG AGCCTTCTGG ACTGGGAAAC 
CTCGTGGGAC TCAGCTGTGT CACCAGTTTC AGGGCCTCCT TGAGTGATAC AATGGCATTA 
TGGGAGTCCC TTCAGCAGCA GGGAGAAGCC CAGCTACTCC AGGCGGCAGA GGAGAAGTTC 
ACCATTGAGC CATTTAAAGC CAAATCCCCA AAGGATGTGG AAGACCTGGA TCGTCTCGTG 
CAGACCCAGA GGCTGAGAAA CCCCTCAGAA GATGCAGCCA AGGATCTTCC TGCCATCCGG 
GACCTTAAGA AGCTAGAGTT TGCGTTGGGC CCCATCTTGG GCCCCCAGGC TTTCCCCACA 
CTGGCAAAGA TCCTTCCAGC CTTCTCTTCT CTGCAACACC TGGACCTGGA CTCACTTAGT 
GAGAACAAGA TCGGAGACAA GGGTGTGTCG AAGCTCTCAG CCACCTTCCC TCAGCTGAAG 
GCCCTGGAGA CGCTCAAATC ATGCACTCTC CCATTCAGCC ACTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_006521789.1
CDS	131..3295
Translation	MNHFQAILAQVQTLLSSQKPRQVRALLDGLLEEELLSREYHCALLHEPDGDALARKISLTLLEKGDLDLTFLSWVCNSLQAPTVERGTSYRDHGDHSLCATMDLGSPEGSYLELLNSDADPLHLYHLYDQMDLAGEEEIELSSEPDTDTINCDQFSKLLQDMELDEETREAYANIAELDQYVFQDTQLEGLSKDLFIEHIGAEEGFGENIEIPVEAGQKPQKRRFPEEHAMDSKHRKLVPTSRTSLNYLDLPTGHIQIFTTLPQGLWQISGAGTGLSSVLIYHGEMPQVNQVLPSSSLSIPSLPESPDRPGSTSPFTPSAADLPSMPEPALTSRVNETEDTSPSPCQEGPESSIKLPKWPEAVERFQHSLQDKYKALPQSPRGPLVAVELVRARLERGSNKSQERELATPDWTERQLAHGGLAEVLQVVSDCRRPGETQVVAVLGKAGQGKSHWARTVSHTWACGQLLQYDFVFYVPCHCLDRPGDTYHLRDLLCPPSLQPLAMDDEVLDYIVRQPDRVLLILDAFEELEAQDGLLHGPCGSLSPEPCSLRGLLAGIFQRKLLRGCTLLLTARPRGRLAQSLSKADAIFEVPSFSTKQAKTYMRHYFENSGTAGNQDKALGLLEGQPLLCSYSHSPVVCRAVCQLSKALLEQGTEAQLPCTLTGLYVSLLGPAAQNSPPGALVELAKLAWELGRRHQSTLQETRFSSVEVKTWAVTQGLMQQTLETTEAQLAFSSFLLQCFLGAVWLAQCNEIKDKELPQYLALTPRKKRPYDNWLEGVPRFLAGLVFQPRAHCLGALVEPAVAAVADRKQKVLTRYLKRLKLGTLRAGRLLELLHCAHETQQPGIWEHVAHQLPGHLSFLGTRLTPPDVYVLGRALETASQDFSLDLRQTGVEPSGLGNLVGLSCVTSFRASLSDTMALWESLQQQGEAQLLQAAEEKFTIEPFKAKSPKDVEDLDRLVQTQRLRNPSEDAAKDLPAIRDLKKLEFALGPILGPQAFPTLAKILPAFSSLQHLDLDSLSENKIGDKGVSKLSATFPQLKALETLKSCTLPFSH

Target ORF information:

RefSeq Version	XM_006521726.4
Organism	Mus musculus(house mouse)
Definition	Mus musculus class II transactivator (Ciita), transcript variant X4, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_006521726.4

ORF Insert Sequence:

ATGAACCACT TCCAGGCCAT CCTGGCCCAA GTACAGACAC TGCTCTCCAG CCAGAAGCCC 
AGGCAGGTGC GGGCCCTCCT GGATGGCCTG CTGGAAGAAG AGCTGCTCTC ACGGGAATAC 
CACTGTGCCT TGCTGCATGA GCCTGATGGT GATGCCCTGG CCCGGAAGAT TTCCCTGACC 
CTGCTGGAGA AAGGGGACTT AGACTTGACT TTCTTGAGCT GGGTCTGCAA CAGTCTGCAG 
GCTCCCACGG TAGAGAGGGG CACCAGCTAC AGGGACCATG GAGACCATAG TCTGTGTGCC 
ACCATGGATC TGGGATCTCC AGAGGGCAGC TACCTGGAAC TCCTTAACAG TGATGCCGAC 
CCCCTACATC TCTACCACCT CTATGACCAG ATGGACCTGG CTGGGGAGGA GGAGATCGAA 
CTCAGCTCAG AGCCAGACAC AGATACCATC AACTGCGACC AGTTCAGCAA GCTGTTGCAG 
GACATGGAAC TGGATGAAGA GACCCGGGAG GCCTATGCCA ACATTGCGGA ACTGGATCAG 
TACGTGTTCC AGGATACCCA GCTCGAGGGC CTGAGCAAGG ACCTCTTCAT AGAGCACATT 
GGAGCAGAGG AAGGCTTTGG TGAGAACATA GAGATCCCTG TAGAAGCAGG ACAGAAGCCT 
CAGAAGAGAC GCTTCCCGGA AGAGCATGCT ATGGACTCAA AGCACAGGAA GCTAGTGCCC 
ACCTCTAGGA CCTCACTGAA CTATTTGGAT CTCCCCACTG GGCACATCCA GATCTTCACC 
ACTCTGCCCC AGGGACTCTG GCAAATCTCA GGGGCTGGCA CAGGTCTCTC CAGTGTCCTA 
ATCTACCACG GTGAGATGCC CCAGGTCAAC CAAGTGCTCC CTTCAAGCAG CCTCAGTATC 
CCCAGTCTCC CCGAGTCCCC AGACCGGCCT GGCTCCACCA GCCCCTTCAC ACCATCTGCA 
GCTGACCTGC CCAGCATGCC CGAACCTGCG CTGACCTCCC GTGTAAATGA GACAGAGGAC 
ACATCTCCCT CCCCATGCCA AGAGGGTCCC GAGTCTTCCA TCAAGCTTCC AAAATGGCCA 
GAGGCTGTGG AGCGATTCCA GCACTCCCTA CAGGACAAAT ACAAGGCATT GCCCCAGAGC 
CCAAGGGGTC CTCTGGTGGC CGTGGAGCTG GTACGGGCCA GGCTGGAAAG AGGCAGCAAC 
AAGAGCCAGG AAAGGGAGCT GGCCACTCCC GACTGGACAG AGCGCCAGCT AGCCCACGGT 
GGTCTGGCAG AGGTACTTCA GGTTGTCAGT GACTGCAGGC GACCAGGAGA GACACAGGTG 
GTCGCTGTGC TGGGCAAGGC TGGCCAGGGA AAGAGCCACT GGGCCAGGAC AGTGAGTCAC 
ACCTGGGCAT GTGGCCAGTT GCTACAATAT GACTTTGTCT TCTATGTCCC CTGTCATTGC 
TTGGATCGTC CCGGGGACAC CTACCACCTG CGGGATCTGC TCTGTCCCCC GAGCCTGCAG 
CCACTGGCCA TGGATGACGA GGTCCTTGAT TATATCGTGA GGCAGCCAGA CCGTGTTCTG 
CTCATCCTAG ATGCTTTCGA GGAGCTAGAG GCCCAAGATG GCCTCCTGCA CGGACCCTGT 
GGATCTCTGT CCCCAGAGCC CTGCTCCCTC CGAGGACTGC TGGCTGGGAT CTTCCAGCGG 
AAGCTACTGC GAGGCTGCAC ACTGCTCCTC ACAGCCCGGC CCCGGGGCCG CCTGGCTCAG 
AGCCTGAGCA AGGCAGATGC CATCTTTGAG GTGCCCAGCT TCTCTACCAA GCAGGCCAAG 
ACTTACATGA GGCACTACTT TGAGAACTCA GGGACAGCGG GGAACCAAGA CAAGGCCCTG 
GGCCTCCTGG AGGGCCAGCC TCTTCTCTGC AGCTATAGTC ACAGCCCTGT TGTGTGCAGG 
GCTGTGTGCC AGCTCTCCAA GGCCCTGCTA GAACAGGGCA CAGAGGCCCA GCTACCTTGT 
ACACTTACAG GACTCTATGT CAGCCTGCTA GGTCCTGCAG CTCAGAACAG TCCTCCCGGA 
GCCTTAGTCG AGCTGGCCAA GCTGGCCTGG GAGCTGGGAC GAAGACACCA AAGCACCTTG 
CAAGAAACCC GGTTTTCATC CGTGGAGGTG AAAACCTGGG CAGTGACCCA AGGCTTGATG 
CAGCAGACCC TGGAGACCAC GGAGGCTCAA CTGGCCTTCT CCAGTTTTCT GCTACAGTGT 
TTCCTGGGTG CTGTGTGGCT GGCACAGTGC AATGAAATCA AAGACAAGGA GCTGCCACAG 
TACCTGGCCT TGACTCCGAG GAAGAAGAGA CCCTATGACA ACTGGCTGGA GGGTGTACCA 
CGCTTTCTGG CTGGATTAGT TTTCCAGCCT CGAGCCCACT GCCTGGGAGC TCTGGTGGAG 
CCTGCAGTGG CTGCAGTGGC GGATAGGAAA CAGAAGGTTC TTACCAGGTA CCTGAAGCGC 
CTGAAGCTGG GGACACTCCG GGCAGGGAGG CTGCTGGAGC TGCTCCACTG TGCCCACGAG 
ACACAGCAAC CTGGGATATG GGAGCATGTT GCACACCAGC TCCCTGGCCA CCTCTCCTTC 
CTGGGCACCC GGCTCACACC CCCAGATGTG TATGTGCTGG GCAGGGCCTT GGAGACAGCC 
AGCCAGGACT TCTCCTTGGA CCTTCGTCAG ACTGGCGTTG AGCCTTCTGG ACTGGGAAAC 
CTCGTGGGAC TCAGCTGTGT CACCAGTTTC AGGGCCTCCT TGAGTGATAC AATGGCATTA 
TGGGAGTCCC TTCAGCAGCA GGGAGAAGCC CAGCTACTCC AGGCGGCAGA GGAGAAGTTC 
ACCATTGAGC CATTTAAAGC CAAATCCCCA AAGGATGTGG AAGACCTGGA TCGTCTCGTG 
CAGACCCAGA GGCTGAGAAA CCCCTCAGAA GATGCAGCCA AGGATCTTCC TGCCATCCGG 
GACCTTAAGA AGCTAGAGTT TGCGTTGGGC CCCATCTTGG GCCCCCAGGC TTTCCCCACA 
CTGGCAAAGA TCCTTCCAGC CTTCTCTTCT CTGCAACACC TGGACCTGGA CTCACTTAGT 
GAGAACAAGA TCGGAGACAA GGGTGTGTCG AAGCTCTCAG CCACCTTCCC TCAGCTGAAG 
GCCCTGGAGA CGCTCAAATC ATGCACTCTC CCATTCAGCC ACTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Ciita ( XM_030248943.1 ) cDNA ORF clone, Mus musculus(house mouse) -> XP_030104803.1 Mus musculus class II transactivator (Ciita), transcript variant X1, mRNA.

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CloneID	OMu86862
Clone ID Related Accession (Same CDS sequence)	XM_030248943.1
Accession Version	XM_030248943.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3234bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-08-07
Organism	Mus musculus(house mouse)
Product	MHC class II transactivator isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000082.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGCGCTGCC TGGTTCCTGG CCCTTCTGGG TCTTACCTGC CGGAGTTGCA AGACCATAGT 
CTGTGTGCCA CCATGGATCT GGGATCTCCA GAGGGCAGCT ACCTGGAACT CCTTAACAGT 
GATGCCGACC CCCTACATCT CTACCACCTC TATGACCAGA TGGACCTGGC TGGGGAGGAG 
GAGATCGAAC TCAGCTCAGA GCCAGACACA GATACCATCA ACTGCGACCA GTTCAGCAAG 
CTGTTGCAGG ACATGGAACT GGATGAAGAG ACCCGGGAGG CCTATGCCAA CATTGCGGAA 
CTGGATCAGT ACGTGTTCCA GGATACCCAG CTCGAGGGCC TGAGCAAGGA CCTCTTCAAG 
CACATTGGAG CAGAGGAAGG CTTTGGTGAG AACATAGAGA TCCCTGTAGA AGCAGGACAG 
AAGCCTCAGA AGAGACGCTT CCCGGAAGAG CATGCTATGG ACTCAAAGCA CAGGAAGCTA 
GTGCCCACCT CTAGGACCTC ACTGAACTAT TTGGATCTCC CCACTGGGCA CATCCAGATC 
TTCACCACTC TGCCCCAGGG ACTCTGGCAA ATCTCAGGGG CTGGCACAGG TCTCTCCAGT 
GTCCTAATCT ACCACGGTGA GATGCCCCAG GTCAACCAAG TGCTCCCTTC AAGCAGCCTC 
AGTATCCCCA GTCTCCCCGA GTCCCCAGAC CGGCCTGGCT CCACCAGCCC CTTCACACCA 
TCTGCAGCTG ACCTGCCCAG CATGCCCGAA CCTGCGCTGA CCTCCCGTGT AAATGAGACA 
GAGGACACAT CTCCCTCCCC ATGCCAAGAG GGTCCCGAGT CTTCCATCAA GCTTCCAAAA 
TGGCCAGAGG CTGTGGAGCG ATTCCAGCAC TCCCTACAGG ACAAATACAA GGCATTGCCC 
CAGAGCCCAA GGGGTCCTCT GGTGGCCGTG GAGCTGGTAC GGGCCAGGCT GGAAAGAGGC 
AGCAACAAGA GCCAGGAAAG GGAGCTGGCC ACTCCCGACT GGACAGAGCG CCAGCTAGCC 
CACGGTGGTC TGGCAGAGGT ACTTCAGGTT GTCAGTGACT GCAGGCGACC AGGAGAGACA 
CAGGTGGTCG CTGTGCTGGG CAAGGCTGGC CAGGGAAAGA GCCACTGGGC CAGGACAGTG 
AGTCACACCT GGGCATGTGG CCAGTTGCTA CAATATGACT TTGTCTTCTA TGTCCCCTGT 
CATTGCTTGG ATCGTCCCGG GGACACCTAC CACCTGCGGG ATCTGCTCTG TCCCCCGAGC 
CTGCAGCCAC TGGCCATGGA TGACGAGGTC CTTGATTATA TCGTGAGGCA GCCAGACCGT 
GTTCTGCTCA TCCTAGATGC TTTCGAGGAG CTAGAGGCCC AAGATGGCCT CCTGCACGGA 
CCCTGTGGAT CTCTGTCCCC AGAGCCCTGC TCCCTCCGAG GACTGCTGGC TGGGATCTTC 
CAGCGGAAGC TACTGCGAGG CTGCACACTG CTCCTCACAG CCCGGCCCCG GGGCCGCCTG 
GCTCAGAGCC TGAGCAAGGC AGATGCCATC TTTGAGGTGC CCAGCTTCTC TACCAAGCAG 
GCCAAGACTT ACATGAGGCA CTACTTTGAG AACTCAGGGA CAGCGGGGAA CCAAGACAAG 
GCCCTGGGCC TCCTGGAGGG CCAGCCTCTT CTCTGCAGCT ATAGTCACAG CCCTGTTGTG 
TGCAGGGCTG TGTGCCAGCT CTCCAAGGCC CTGCTAGAAC AGGGCACAGA GGCCCAGCTA 
CCTTGTACAC TTACAGGACT CTATGTCAGC CTGCTAGGTC CTGCAGCTCA GAACAGTCCT 
CCCGGAGCCT TAGTCGAGCT GGCCAAGCTG GCCTGGGAGC TGGGACGAAG ACACCAAAGC 
ACCTTGCAAG AAACCCGGTT TTCATCCGTG GAGGTGAAAA CCTGGGCAGT GACCCAAGGC 
TTGATGCAGC AGACCCTGGA GACCACGGAG GCTCAACTGG CCTTCTCCAG TTTTCTGCTA 
CAGTGTTTCC TGGGTGCTGT GTGGCTGGCA CAGTGCAATG AAATCAAAGA CAAGGAGCTG 
CCACAGTACC TGGCCTTGAC TCCGAGGAAG AAGAGACCCT ATGACAACTG GCTGGAGGGT 
GTACCACGCT TTCTGGCTGG ATTAGTTTTC CAGCCTCGAG CCCACTGCCT GGGAGCTCTG 
GTGGAGCCTG CAGTGGCTGC AGTGGCGGAT AGGAAACAGA AGGTTCTTAC CAGGTACCTG 
AAGCGCCTGA AGCTGGGGAC ACTCCGGGCA GGGAGGCTGC TGGAGCTGCT CCACTGTGCC 
CACGAGACAC AGCAACCTGG GATATGGGAG CATGTTGCAC ACCAGCTCCC TGGCCACCTC 
TCCTTCCTGG GCACCCGGCT CACACCCCCA GATGTGTATG TGCTGGGCAG GGCCTTGGAG 
ACAGCCAGCC AGGACTTCTC CTTGGACCTT CGTCAGACTG GCGTTGAGCC TTCTGGACTG 
GGAAACCTCG TGGGACTCAG CTGTGTCACC AGTTTCAGGG CCTCCTTGAG TGATACAATG 
GCATTATGGG AGTCCCTTCA GCAGCAGGGA GAAGCCCAGC TACTCCAGGC GGCAGAGGAG 
AAGTTCACCA TTGAGCCATT TAAAGCCAAA TCCCCAAAGG ATGTGGAAGA CCTGGATCGT 
CTCGTGCAGA CCCAGAGGCT GAGAAACCCC TCAGAAGATG CAGCCAAGGA TCTTCCTGCC 
ATCCGGGACC TTAAGAAGCT AGAGTTTGCG TTGGGCCCCA TCTTGGGCCC CCAGGCTTTC 
CCCACACTGG CAAAGATCCT TCCAGCCTTC TCTTCTCTGC AACACCTGGA CCTGGACTCA 
CTTAGTGAGA ACAAGATCGG AGACAAGGGT GTGTCGAAGC TCTCAGCCAC CTTCCCTCAG 
CTGAAGGCCC TGGAGACGCT CAACTTGTCC CAAAACAACA TCACTGATGT GGGTGCCTGC 
AAGCTTGCAG AAGCTCTGCC AGCCCTAGCC AAGTCCCTCC TAAGGCTGAG CTTGTACAAT 
AACTGCATCT GTGACAAAGG AGCCAAGAGC CTGGCACAAG TACTTCCGGA CATGGTGTCC 
CTGCGTGTGA TGGATGTCCA GTTCAACAAG TTCACGGCTG CCGGTGCCCA GCAACTGGCC 
TCCAGCCTTC AGAAGTGCCC TCAGGTGGAA ACACTGGCAA TGTGGACACC CACTATCCCC 
TTTGGGGTTC AGGAACACCT GCAGCAGCTG GATGCCAGGA TCAGTCTGAG ATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_030104803.1
CDS	250..3483
Translation	MRCLVPGPSGSYLPELQDHSLCATMDLGSPEGSYLELLNSDADPLHLYHLYDQMDLAGEEEIELSSEPDTDTINCDQFSKLLQDMELDEETREAYANIAELDQYVFQDTQLEGLSKDLFKHIGAEEGFGENIEIPVEAGQKPQKRRFPEEHAMDSKHRKLVPTSRTSLNYLDLPTGHIQIFTTLPQGLWQISGAGTGLSSVLIYHGEMPQVNQVLPSSSLSIPSLPESPDRPGSTSPFTPSAADLPSMPEPALTSRVNETEDTSPSPCQEGPESSIKLPKWPEAVERFQHSLQDKYKALPQSPRGPLVAVELVRARLERGSNKSQERELATPDWTERQLAHGGLAEVLQVVSDCRRPGETQVVAVLGKAGQGKSHWARTVSHTWACGQLLQYDFVFYVPCHCLDRPGDTYHLRDLLCPPSLQPLAMDDEVLDYIVRQPDRVLLILDAFEELEAQDGLLHGPCGSLSPEPCSLRGLLAGIFQRKLLRGCTLLLTARPRGRLAQSLSKADAIFEVPSFSTKQAKTYMRHYFENSGTAGNQDKALGLLEGQPLLCSYSHSPVVCRAVCQLSKALLEQGTEAQLPCTLTGLYVSLLGPAAQNSPPGALVELAKLAWELGRRHQSTLQETRFSSVEVKTWAVTQGLMQQTLETTEAQLAFSSFLLQCFLGAVWLAQCNEIKDKELPQYLALTPRKKRPYDNWLEGVPRFLAGLVFQPRAHCLGALVEPAVAAVADRKQKVLTRYLKRLKLGTLRAGRLLELLHCAHETQQPGIWEHVAHQLPGHLSFLGTRLTPPDVYVLGRALETASQDFSLDLRQTGVEPSGLGNLVGLSCVTSFRASLSDTMALWESLQQQGEAQLLQAAEEKFTIEPFKAKSPKDVEDLDRLVQTQRLRNPSEDAAKDLPAIRDLKKLEFALGPILGPQAFPTLAKILPAFSSLQHLDLDSLSENKIGDKGVSKLSATFPQLKALETLNLSQNNITDVGACKLAEALPALAKSLLRLSLYNNCICDKGAKSLAQVLPDMVSLRVMDVQFNKFTAAGAQQLASSLQKCPQVETLAMWTPTIPFGVQEHLQQLDARISLR

Target ORF information:

RefSeq Version	XM_030248943.1
Organism	Mus musculus(house mouse)
Definition	Mus musculus class II transactivator (Ciita), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_030248943.1

ORF Insert Sequence:

ATGCGCTGCC TGGTTCCTGG CCCTTCTGGG TCTTACCTGC CGGAGTTGCA AGACCATAGT 
CTGTGTGCCA CCATGGATCT GGGATCTCCA GAGGGCAGCT ACCTGGAACT CCTTAACAGT 
GATGCCGACC CCCTACATCT CTACCACCTC TATGACCAGA TGGACCTGGC TGGGGAGGAG 
GAGATCGAAC TCAGCTCAGA GCCAGACACA GATACCATCA ACTGCGACCA GTTCAGCAAG 
CTGTTGCAGG ACATGGAACT GGATGAAGAG ACCCGGGAGG CCTATGCCAA CATTGCGGAA 
CTGGATCAGT ACGTGTTCCA GGATACCCAG CTCGAGGGCC TGAGCAAGGA CCTCTTCAAG 
CACATTGGAG CAGAGGAAGG CTTTGGTGAG AACATAGAGA TCCCTGTAGA AGCAGGACAG 
AAGCCTCAGA AGAGACGCTT CCCGGAAGAG CATGCTATGG ACTCAAAGCA CAGGAAGCTA 
GTGCCCACCT CTAGGACCTC ACTGAACTAT TTGGATCTCC CCACTGGGCA CATCCAGATC 
TTCACCACTC TGCCCCAGGG ACTCTGGCAA ATCTCAGGGG CTGGCACAGG TCTCTCCAGT 
GTCCTAATCT ACCACGGTGA GATGCCCCAG GTCAACCAAG TGCTCCCTTC AAGCAGCCTC 
AGTATCCCCA GTCTCCCCGA GTCCCCAGAC CGGCCTGGCT CCACCAGCCC CTTCACACCA 
TCTGCAGCTG ACCTGCCCAG CATGCCCGAA CCTGCGCTGA CCTCCCGTGT AAATGAGACA 
GAGGACACAT CTCCCTCCCC ATGCCAAGAG GGTCCCGAGT CTTCCATCAA GCTTCCAAAA 
TGGCCAGAGG CTGTGGAGCG ATTCCAGCAC TCCCTACAGG ACAAATACAA GGCATTGCCC 
CAGAGCCCAA GGGGTCCTCT GGTGGCCGTG GAGCTGGTAC GGGCCAGGCT GGAAAGAGGC 
AGCAACAAGA GCCAGGAAAG GGAGCTGGCC ACTCCCGACT GGACAGAGCG CCAGCTAGCC 
CACGGTGGTC TGGCAGAGGT ACTTCAGGTT GTCAGTGACT GCAGGCGACC AGGAGAGACA 
CAGGTGGTCG CTGTGCTGGG CAAGGCTGGC CAGGGAAAGA GCCACTGGGC CAGGACAGTG 
AGTCACACCT GGGCATGTGG CCAGTTGCTA CAATATGACT TTGTCTTCTA TGTCCCCTGT 
CATTGCTTGG ATCGTCCCGG GGACACCTAC CACCTGCGGG ATCTGCTCTG TCCCCCGAGC 
CTGCAGCCAC TGGCCATGGA TGACGAGGTC CTTGATTATA TCGTGAGGCA GCCAGACCGT 
GTTCTGCTCA TCCTAGATGC TTTCGAGGAG CTAGAGGCCC AAGATGGCCT CCTGCACGGA 
CCCTGTGGAT CTCTGTCCCC AGAGCCCTGC TCCCTCCGAG GACTGCTGGC TGGGATCTTC 
CAGCGGAAGC TACTGCGAGG CTGCACACTG CTCCTCACAG CCCGGCCCCG GGGCCGCCTG 
GCTCAGAGCC TGAGCAAGGC AGATGCCATC TTTGAGGTGC CCAGCTTCTC TACCAAGCAG 
GCCAAGACTT ACATGAGGCA CTACTTTGAG AACTCAGGGA CAGCGGGGAA CCAAGACAAG 
GCCCTGGGCC TCCTGGAGGG CCAGCCTCTT CTCTGCAGCT ATAGTCACAG CCCTGTTGTG 
TGCAGGGCTG TGTGCCAGCT CTCCAAGGCC CTGCTAGAAC AGGGCACAGA GGCCCAGCTA 
CCTTGTACAC TTACAGGACT CTATGTCAGC CTGCTAGGTC CTGCAGCTCA GAACAGTCCT 
CCCGGAGCCT TAGTCGAGCT GGCCAAGCTG GCCTGGGAGC TGGGACGAAG ACACCAAAGC 
ACCTTGCAAG AAACCCGGTT TTCATCCGTG GAGGTGAAAA CCTGGGCAGT GACCCAAGGC 
TTGATGCAGC AGACCCTGGA GACCACGGAG GCTCAACTGG CCTTCTCCAG TTTTCTGCTA 
CAGTGTTTCC TGGGTGCTGT GTGGCTGGCA CAGTGCAATG AAATCAAAGA CAAGGAGCTG 
CCACAGTACC TGGCCTTGAC TCCGAGGAAG AAGAGACCCT ATGACAACTG GCTGGAGGGT 
GTACCACGCT TTCTGGCTGG ATTAGTTTTC CAGCCTCGAG CCCACTGCCT GGGAGCTCTG 
GTGGAGCCTG CAGTGGCTGC AGTGGCGGAT AGGAAACAGA AGGTTCTTAC CAGGTACCTG 
AAGCGCCTGA AGCTGGGGAC ACTCCGGGCA GGGAGGCTGC TGGAGCTGCT CCACTGTGCC 
CACGAGACAC AGCAACCTGG GATATGGGAG CATGTTGCAC ACCAGCTCCC TGGCCACCTC 
TCCTTCCTGG GCACCCGGCT CACACCCCCA GATGTGTATG TGCTGGGCAG GGCCTTGGAG 
ACAGCCAGCC AGGACTTCTC CTTGGACCTT CGTCAGACTG GCGTTGAGCC TTCTGGACTG 
GGAAACCTCG TGGGACTCAG CTGTGTCACC AGTTTCAGGG CCTCCTTGAG TGATACAATG 
GCATTATGGG AGTCCCTTCA GCAGCAGGGA GAAGCCCAGC TACTCCAGGC GGCAGAGGAG 
AAGTTCACCA TTGAGCCATT TAAAGCCAAA TCCCCAAAGG ATGTGGAAGA CCTGGATCGT 
CTCGTGCAGA CCCAGAGGCT GAGAAACCCC TCAGAAGATG CAGCCAAGGA TCTTCCTGCC 
ATCCGGGACC TTAAGAAGCT AGAGTTTGCG TTGGGCCCCA TCTTGGGCCC CCAGGCTTTC 
CCCACACTGG CAAAGATCCT TCCAGCCTTC TCTTCTCTGC AACACCTGGA CCTGGACTCA 
CTTAGTGAGA ACAAGATCGG AGACAAGGGT GTGTCGAAGC TCTCAGCCAC CTTCCCTCAG 
CTGAAGGCCC TGGAGACGCT CAACTTGTCC CAAAACAACA TCACTGATGT GGGTGCCTGC 
AAGCTTGCAG AAGCTCTGCC AGCCCTAGCC AAGTCCCTCC TAAGGCTGAG CTTGTACAAT 
AACTGCATCT GTGACAAAGG AGCCAAGAGC CTGGCACAAG TACTTCCGGA CATGGTGTCC 
CTGCGTGTGA TGGATGTCCA GTTCAACAAG TTCACGGCTG CCGGTGCCCA GCAACTGGCC 
TCCAGCCTTC AGAAGTGCCC TCAGGTGGAA ACACTGGCAA TGTGGACACC CACTATCCCC 
TTTGGGGTTC AGGAACACCT GCAGCAGCTG GATGCCAGGA TCAGTCTGAG ATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Ciita ( NM_001243760.2 ) cDNA ORF clone, Mus musculus(house mouse) -> NP_001230689.1 Mus musculus class II transactivator (Ciita), transcript variant 1, mRNA.

Price & Availability↑

CloneID	OMu21832
Clone ID Related Accession (Same CDS sequence)	NM_001243760.2
Accession Version	NM_001243760.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3465bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-09-14
Organism	Mus musculus(house mouse)
Product	MHC class II transactivator isoform 1
Comment	Comment: REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from AK143956.1, AK138822.1, AK153609.1, BC107330.1, BE850370.1 and AI182240.1. On Nov 1, 2014 this sequence version replaced NM_001243760.1. Transcript Variant: This variant (1) uses an alternate in-frame splice site in the 5' coding region, compared to variant 4. It encodes isoform 1, which is shorter than isoform 4. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## RNAseq introns :: single sample supports all introns SAMN00849374, SAMN00849375 [ECO:0000348] ##Evidence-Data-END##

ATGAACCACT TCCAGGCCAT CCTGGCCCAA GTACAGACAC TGCTCTCCAG CCAGAAGCCC 
AGGCAGGTGC GGGCCCTCCT GGATGGCCTG CTGGAAGAAG AGCTGCTCTC ACGGGAATAC 
CACTGTGCCT TGCTGCATGA GCCTGATGGT GATGCCCTGG CCCGGAAGAT TTCCCTGACC 
CTGCTGGAGA AAGGGGACTT AGACTTGACT TTCTTGAGCT GGGTCTGCAA CAGTCTGCAG 
GCTCCCACGG TAGAGAGGGG CACCAGCTAC AGGGACCATG GAGACCATAG TCTGTGTGCC 
ACCATGGATC TGGGATCTCC AGAGGGCAGC TACCTGGAAC TCCTTAACAG TGATGCCGAC 
CCCCTACATC TCTACCACCT CTATGACCAG ATGGACCTGG CTGGGGAGGA GGAGATCGAA 
CTCAGCTCAG AGCCAGACAC AGATACCATC AACTGCGACC AGTTCAGCAA GCTGTTGCAG 
GACATGGAAC TGGATGAAGA GACCCGGGAG GCCTATGCCA ACATTGCGGA ACTGGATCAG 
TACGTGTTCC AGGATACCCA GCTCGAGGGC CTGAGCAAGG ACCTCTTCAA GCACATTGGA 
GCAGAGGAAG GCTTTGGTGA GAACATAGAG ATCCCTGTAG AAGCAGGACA GAAGCCTCAG 
AAGAGACGCT TCCCGGAAGA GCATGCTATG GACTCAAAGC ACAGGAAGCT AGTGCCCACC 
TCTAGGACCT CACTGAACTA TTTGGATCTC CCCACTGGGC ACATCCAGAT CTTCACCACT 
CTGCCCCAGG GACTCTGGCA AATCTCAGGG GCTGGCACAG GTCTCTCCAG TGTCCTAATC 
TACCACGGTG AGATGCCCCA GGTCAACCAA GTGCTCCCTT CAAGCAGCCT CAGTATCCCC 
AGTCTCCCCG AGTCCCCAGA CCGGCCTGGC TCCACCAGCC CCTTCACACC ATCTGCAGCT 
GACCTGCCCA GCATGCCCGA ACCTGCGCTG ACCTCCCGTG TAAATGAGAC AGAGGACACA 
TCTCCCTCCC CATGCCAAGA GGGTCCCGAG TCTTCCATCA AGCTTCCAAA ATGGCCAGAG 
GCTGTGGAGC GATTCCAGCA CTCCCTACAG GACAAATACA AGGCATTGCC CCAGAGCCCA 
AGGGGTCCTC TGGTGGCCGT GGAGCTGGTA CGGGCCAGGC TGGAAAGAGG CAGCAACAAG 
AGCCAGGAAA GGGAGCTGGC CACTCCCGAC TGGACAGAGC GCCAGCTAGC CCACGGTGGT 
CTGGCAGAGG TACTTCAGGT TGTCAGTGAC TGCAGGCGAC CAGGAGAGAC ACAGGTGGTC 
GCTGTGCTGG GCAAGGCTGG CCAGGGAAAG AGCCACTGGG CCAGGACAGT GAGTCACACC 
TGGGCATGTG GCCAGTTGCT ACAATATGAC TTTGTCTTCT ATGTCCCCTG TCATTGCTTG 
GATCGTCCCG GGGACACCTA CCACCTGCGG GATCTGCTCT GTCCCCCGAG CCTGCAGCCA 
CTGGCCATGG ATGACGAGGT CCTTGATTAT ATCGTGAGGC AGCCAGACCG TGTTCTGCTC 
ATCCTAGATG CTTTCGAGGA GCTAGAGGCC CAAGATGGCC TCCTGCACGG ACCCTGTGGA 
TCTCTGTCCC CAGAGCCCTG CTCCCTCCGA GGACTGCTGG CTGGGATCTT CCAGCGGAAG 
CTACTGCGAG GCTGCACACT GCTCCTCACA GCCCGGCCCC GGGGCCGCCT GGCTCAGAGC 
CTGAGCAAGG CAGATGCCAT CTTTGAGGTG CCCAGCTTCT CTACCAAGCA GGCCAAGACT 
TACATGAGGC ACTACTTTGA GAACTCAGGG ACAGCGGGGA ACCAAGACAA GGCCCTGGGC 
CTCCTGGAGG GCCAGCCTCT TCTCTGCAGC TATAGTCACA GCCCTGTTGT GTGCAGGGCT 
GTGTGCCAGC TCTCCAAGGC CCTGCTAGAA CAGGGCACAG AGGCCCAGCT ACCTTGTACA 
CTTACAGGAC TCTATGTCAG CCTGCTAGGT CCTGCAGCTC AGAACAGTCC TCCCGGAGCC 
TTAGTCGAGC TGGCCAAGCT GGCCTGGGAG CTGGGACGAA GACACCAAAG CACCTTGCAA 
GAAACCCGGT TTTCATCCGT GGAGGTGAAA ACCTGGGCAG TGACCCAAGG CTTGATGCAG 
CAGACCCTGG AGACCACGGA GGCTCAACTG GCCTTCTCCA GTTTTCTGCT ACAGTGTTTC 
CTGGGTGCTG TGTGGCTGGC ACAGTGCAAT GAAATCAAAG ACAAGGAGCT GCCACAGTAC 
CTGGCCTTGA CTCCGAGGAA GAAGAGACCC TATGACAACT GGCTGGAGGG TGTACCACGC 
TTTCTGGCTG GATTAGTTTT CCAGCCTCGA GCCCACTGCC TGGGAGCTCT GGTGGAGCCT 
GCAGTGGCTG CAGTGGCGGA TAGGAAACAG AAGGTTCTTA CCAGGTACCT GAAGCGCCTG 
AAGCTGGGGA CACTCCGGGC AGGGAGGCTG CTGGAGCTGC TCCACTGTGC CCACGAGACA 
CAGCAACCTG GGATATGGGA GCATGTTGCA CACCAGCTCC CTGGCCACCT CTCCTTCCTG 
GGCACCCGGC TCACACCCCC AGATGTGTAT GTGCTGGGCA GGGCCTTGGA GACAGCCAGC 
CAGGACTTCT CCTTGGACCT TCGTCAGACT GGCGTTGAGC CTTCTGGACT GGGAAACCTC 
GTGGGACTCA GCTGTGTCAC CAGTTTCAGG GCCTCCTTGA GTGATACAAT GGCATTATGG 
GAGTCCCTTC AGCAGCAGGG AGAAGCCCAG CTACTCCAGG CGGCAGAGGA GAAGTTCACC 
ATTGAGCCAT TTAAAGCCAA ATCCCCAAAG GATGTGGAAG ACCTGGATCG TCTCGTGCAG 
ACCCAGAGGC TGAGAAACCC CTCAGAAGAT GCAGCCAAGG ATCTTCCTGC CATCCGGGAC 
CTTAAGAAGC TAGAGTTTGC GTTGGGCCCC ATCTTGGGCC CCCAGGCTTT CCCCACACTG 
GCAAAGATCC TTCCAGCCTT CTCTTCTCTG CAACACCTGG ACCTGGACTC ACTTAGTGAG 
AACAAGATCG GAGACAAGGG TGTGTCGAAG CTCTCAGCCA CCTTCCCTCA GCTGAAGGCC 
CTGGAGACGC TCAACTTGTC CCAAAACAAC ATCACTGATG TGGGTGCCTG CAAGCTTGCA 
GAAGCTCTGC CAGCCCTAGC CAAGTCCCTC CTAAGGCTGA GCTTGTACAA TAACTGCATC 
TGTGACAAAG GAGCCAAGAG CCTGGCACAA GTACTTCCGG ACATGGTGTC CCTGCGTGTG 
ATGGATGTCC AGTTCAACAA GTTCACGGCT GCCGGTGCCC AGCAACTGGC CTCCAGCCTT 
CAGAAGTGCC CTCAGGTGGA AACACTGGCA ATGTGGACAC CCACTATCCC CTTTGGGGTT 
CAGGAACACC TGCAGCAGCT GGATGCCAGG ATCAGTCTGA GATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001230689.1
CDS	73..3537
Translation	MNHFQAILAQVQTLLSSQKPRQVRALLDGLLEEELLSREYHCALLHEPDGDALARKISLTLLEKGDLDLTFLSWVCNSLQAPTVERGTSYRDHGDHSLCATMDLGSPEGSYLELLNSDADPLHLYHLYDQMDLAGEEEIELSSEPDTDTINCDQFSKLLQDMELDEETREAYANIAELDQYVFQDTQLEGLSKDLFKHIGAEEGFGENIEIPVEAGQKPQKRRFPEEHAMDSKHRKLVPTSRTSLNYLDLPTGHIQIFTTLPQGLWQISGAGTGLSSVLIYHGEMPQVNQVLPSSSLSIPSLPESPDRPGSTSPFTPSAADLPSMPEPALTSRVNETEDTSPSPCQEGPESSIKLPKWPEAVERFQHSLQDKYKALPQSPRGPLVAVELVRARLERGSNKSQERELATPDWTERQLAHGGLAEVLQVVSDCRRPGETQVVAVLGKAGQGKSHWARTVSHTWACGQLLQYDFVFYVPCHCLDRPGDTYHLRDLLCPPSLQPLAMDDEVLDYIVRQPDRVLLILDAFEELEAQDGLLHGPCGSLSPEPCSLRGLLAGIFQRKLLRGCTLLLTARPRGRLAQSLSKADAIFEVPSFSTKQAKTYMRHYFENSGTAGNQDKALGLLEGQPLLCSYSHSPVVCRAVCQLSKALLEQGTEAQLPCTLTGLYVSLLGPAAQNSPPGALVELAKLAWELGRRHQSTLQETRFSSVEVKTWAVTQGLMQQTLETTEAQLAFSSFLLQCFLGAVWLAQCNEIKDKELPQYLALTPRKKRPYDNWLEGVPRFLAGLVFQPRAHCLGALVEPAVAAVADRKQKVLTRYLKRLKLGTLRAGRLLELLHCAHETQQPGIWEHVAHQLPGHLSFLGTRLTPPDVYVLGRALETASQDFSLDLRQTGVEPSGLGNLVGLSCVTSFRASLSDTMALWESLQQQGEAQLLQAAEEKFTIEPFKAKSPKDVEDLDRLVQTQRLRNPSEDAAKDLPAIRDLKKLEFALGPILGPQAFPTLAKILPAFSSLQHLDLDSLSENKIGDKGVSKLSATFPQLKALETLNLSQNNITDVGACKLAEALPALAKSLLRLSLYNNCICDKGAKSLAQVLPDMVSLRVMDVQFNKFTAAGAQQLASSLQKCPQVETLAMWTPTIPFGVQEHLQQLDARISLR

Target ORF information:

RefSeq Version	NM_001243760.2
Organism	Mus musculus(house mouse)
Definition	Mus musculus class II transactivator (Ciita), transcript variant 1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001243760.2

ORF Insert Sequence:

ATGAACCACT TCCAGGCCAT CCTGGCCCAA GTACAGACAC TGCTCTCCAG CCAGAAGCCC 
AGGCAGGTGC GGGCCCTCCT GGATGGCCTG CTGGAAGAAG AGCTGCTCTC ACGGGAATAC 
CACTGTGCCT TGCTGCATGA GCCTGATGGT GATGCCCTGG CCCGGAAGAT TTCCCTGACC 
CTGCTGGAGA AAGGGGACTT AGACTTGACT TTCTTGAGCT GGGTCTGCAA CAGTCTGCAG 
GCTCCCACGG TAGAGAGGGG CACCAGCTAC AGGGACCATG GAGACCATAG TCTGTGTGCC 
ACCATGGATC TGGGATCTCC AGAGGGCAGC TACCTGGAAC TCCTTAACAG TGATGCCGAC 
CCCCTACATC TCTACCACCT CTATGACCAG ATGGACCTGG CTGGGGAGGA GGAGATCGAA 
CTCAGCTCAG AGCCAGACAC AGATACCATC AACTGCGACC AGTTCAGCAA GCTGTTGCAG 
GACATGGAAC TGGATGAAGA GACCCGGGAG GCCTATGCCA ACATTGCGGA ACTGGATCAG 
TACGTGTTCC AGGATACCCA GCTCGAGGGC CTGAGCAAGG ACCTCTTCAA GCACATTGGA 
GCAGAGGAAG GCTTTGGTGA GAACATAGAG ATCCCTGTAG AAGCAGGACA GAAGCCTCAG 
AAGAGACGCT TCCCGGAAGA GCATGCTATG GACTCAAAGC ACAGGAAGCT AGTGCCCACC 
TCTAGGACCT CACTGAACTA TTTGGATCTC CCCACTGGGC ACATCCAGAT CTTCACCACT 
CTGCCCCAGG GACTCTGGCA AATCTCAGGG GCTGGCACAG GTCTCTCCAG TGTCCTAATC 
TACCACGGTG AGATGCCCCA GGTCAACCAA GTGCTCCCTT CAAGCAGCCT CAGTATCCCC 
AGTCTCCCCG AGTCCCCAGA CCGGCCTGGC TCCACCAGCC CCTTCACACC ATCTGCAGCT 
GACCTGCCCA GCATGCCCGA ACCTGCGCTG ACCTCCCGTG TAAATGAGAC AGAGGACACA 
TCTCCCTCCC CATGCCAAGA GGGTCCCGAG TCTTCCATCA AGCTTCCAAA ATGGCCAGAG 
GCTGTGGAGC GATTCCAGCA CTCCCTACAG GACAAATACA AGGCATTGCC CCAGAGCCCA 
AGGGGTCCTC TGGTGGCCGT GGAGCTGGTA CGGGCCAGGC TGGAAAGAGG CAGCAACAAG 
AGCCAGGAAA GGGAGCTGGC CACTCCCGAC TGGACAGAGC GCCAGCTAGC CCACGGTGGT 
CTGGCAGAGG TACTTCAGGT TGTCAGTGAC TGCAGGCGAC CAGGAGAGAC ACAGGTGGTC 
GCTGTGCTGG GCAAGGCTGG CCAGGGAAAG AGCCACTGGG CCAGGACAGT GAGTCACACC 
TGGGCATGTG GCCAGTTGCT ACAATATGAC TTTGTCTTCT ATGTCCCCTG TCATTGCTTG 
GATCGTCCCG GGGACACCTA CCACCTGCGG GATCTGCTCT GTCCCCCGAG CCTGCAGCCA 
CTGGCCATGG ATGACGAGGT CCTTGATTAT ATCGTGAGGC AGCCAGACCG TGTTCTGCTC 
ATCCTAGATG CTTTCGAGGA GCTAGAGGCC CAAGATGGCC TCCTGCACGG ACCCTGTGGA 
TCTCTGTCCC CAGAGCCCTG CTCCCTCCGA GGACTGCTGG CTGGGATCTT CCAGCGGAAG 
CTACTGCGAG GCTGCACACT GCTCCTCACA GCCCGGCCCC GGGGCCGCCT GGCTCAGAGC 
CTGAGCAAGG CAGATGCCAT CTTTGAGGTG CCCAGCTTCT CTACCAAGCA GGCCAAGACT 
TACATGAGGC ACTACTTTGA GAACTCAGGG ACAGCGGGGA ACCAAGACAA GGCCCTGGGC 
CTCCTGGAGG GCCAGCCTCT TCTCTGCAGC TATAGTCACA GCCCTGTTGT GTGCAGGGCT 
GTGTGCCAGC TCTCCAAGGC CCTGCTAGAA CAGGGCACAG AGGCCCAGCT ACCTTGTACA 
CTTACAGGAC TCTATGTCAG CCTGCTAGGT CCTGCAGCTC AGAACAGTCC TCCCGGAGCC 
TTAGTCGAGC TGGCCAAGCT GGCCTGGGAG CTGGGACGAA GACACCAAAG CACCTTGCAA 
GAAACCCGGT TTTCATCCGT GGAGGTGAAA ACCTGGGCAG TGACCCAAGG CTTGATGCAG 
CAGACCCTGG AGACCACGGA GGCTCAACTG GCCTTCTCCA GTTTTCTGCT ACAGTGTTTC 
CTGGGTGCTG TGTGGCTGGC ACAGTGCAAT GAAATCAAAG ACAAGGAGCT GCCACAGTAC 
CTGGCCTTGA CTCCGAGGAA GAAGAGACCC TATGACAACT GGCTGGAGGG TGTACCACGC 
TTTCTGGCTG GATTAGTTTT CCAGCCTCGA GCCCACTGCC TGGGAGCTCT GGTGGAGCCT 
GCAGTGGCTG CAGTGGCGGA TAGGAAACAG AAGGTTCTTA CCAGGTACCT GAAGCGCCTG 
AAGCTGGGGA CACTCCGGGC AGGGAGGCTG CTGGAGCTGC TCCACTGTGC CCACGAGACA 
CAGCAACCTG GGATATGGGA GCATGTTGCA CACCAGCTCC CTGGCCACCT CTCCTTCCTG 
GGCACCCGGC TCACACCCCC AGATGTGTAT GTGCTGGGCA GGGCCTTGGA GACAGCCAGC 
CAGGACTTCT CCTTGGACCT TCGTCAGACT GGCGTTGAGC CTTCTGGACT GGGAAACCTC 
GTGGGACTCA GCTGTGTCAC CAGTTTCAGG GCCTCCTTGA GTGATACAAT GGCATTATGG 
GAGTCCCTTC AGCAGCAGGG AGAAGCCCAG CTACTCCAGG CGGCAGAGGA GAAGTTCACC 
ATTGAGCCAT TTAAAGCCAA ATCCCCAAAG GATGTGGAAG ACCTGGATCG TCTCGTGCAG 
ACCCAGAGGC TGAGAAACCC CTCAGAAGAT GCAGCCAAGG ATCTTCCTGC CATCCGGGAC 
CTTAAGAAGC TAGAGTTTGC GTTGGGCCCC ATCTTGGGCC CCCAGGCTTT CCCCACACTG 
GCAAAGATCC TTCCAGCCTT CTCTTCTCTG CAACACCTGG ACCTGGACTC ACTTAGTGAG 
AACAAGATCG GAGACAAGGG TGTGTCGAAG CTCTCAGCCA CCTTCCCTCA GCTGAAGGCC 
CTGGAGACGC TCAACTTGTC CCAAAACAAC ATCACTGATG TGGGTGCCTG CAAGCTTGCA 
GAAGCTCTGC CAGCCCTAGC CAAGTCCCTC CTAAGGCTGA GCTTGTACAA TAACTGCATC 
TGTGACAAAG GAGCCAAGAG CCTGGCACAA GTACTTCCGG ACATGGTGTC CCTGCGTGTG 
ATGGATGTCC AGTTCAACAA GTTCACGGCT GCCGGTGCCC AGCAACTGGC CTCCAGCCTT 
CAGAAGTGCC CTCAGGTGGA AACACTGGCA ATGTGGACAC CCACTATCCC CTTTGGGGTT 
CAGGAACACC TGCAGCAGCT GGATGCCAGG ATCAGTCTGA GATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Ciita ( NM_001243761.2 ) cDNA ORF clone, Mus musculus(house mouse) -> NP_001230690.1 Mus musculus class II transactivator (Ciita), transcript variant 3, mRNA.

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CloneID	OMu21834
Clone ID Related Accession (Same CDS sequence)	NM_001243761.2
Accession Version	NM_001243761.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3228bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-10-26
Organism	Mus musculus(house mouse)
Product	MHC class II transactivator isoform 3
Comment	Comment: REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from AF100710.1, AK153609.1, BC107330.1, BE850370.1 and AI182240.1. On Nov 1, 2014 this sequence version replaced NM_001243761.1. Transcript Variant: This variant (3) differs in the 5' UTR and uses an alternate start codon compared to variant 4. It encodes isoform 3, which is shorter and has a distinct N-terminus, compared to isoform 4. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## RNAseq introns :: single sample supports all introns SAMN00849374, SAMN00849375 [ECO:0000348] ##Evidence-Data-END##

ATGCAGGCAG CACTCAGAAG CACGGGGCAC AGCCACAGCC GCGACCATAG TCTGTGTGCC 
ACCATGGATC TGGGATCTCC AGAGGGCAGC TACCTGGAAC TCCTTAACAG TGATGCCGAC 
CCCCTACATC TCTACCACCT CTATGACCAG ATGGACCTGG CTGGGGAGGA GGAGATCGAA 
CTCAGCTCAG AGCCAGACAC AGATACCATC AACTGCGACC AGTTCAGCAA GCTGTTGCAG 
GACATGGAAC TGGATGAAGA GACCCGGGAG GCCTATGCCA ACATTGCGGA ACTGGATCAG 
TACGTGTTCC AGGATACCCA GCTCGAGGGC CTGAGCAAGG ACCTCTTCAT AGAGCACATT 
GGAGCAGAGG AAGGCTTTGG TGAGAACATA GAGATCCCTG TAGAAGCAGG ACAGAAGCCT 
CAGAAGAGAC GCTTCCCGGA AGAGCATGCT ATGGACTCAA AGCACAGGAA GCTAGTGCCC 
ACCTCTAGGA CCTCACTGAA CTATTTGGAT CTCCCCACTG GGCACATCCA GATCTTCACC 
ACTCTGCCCC AGGGACTCTG GCAAATCTCA GGGGCTGGCA CAGGTCTCTC CAGTGTCCTA 
ATCTACCACG GTGAGATGCC CCAGGTCAAC CAAGTGCTCC CTTCAAGCAG CCTCAGTATC 
CCCAGTCTCC CCGAGTCCCC AGACCGGCCT GGCTCCACCA GCCCCTTCAC ACCATCTGCA 
GCTGACCTGC CCAGCATGCC CGAACCTGCG CTGACCTCCC GTGTAAATGA GACAGAGGAC 
ACATCTCCCT CCCCATGCCA AGAGGGTCCC GAGTCTTCCA TCAAGCTTCC AAAATGGCCA 
GAGGCTGTGG AGCGATTCCA GCACTCCCTA CAGGACAAAT ACAAGGCATT GCCCCAGAGC 
CCAAGGGGTC CTCTGGTGGC CGTGGAGCTG GTACGGGCCA GGCTGGAAAG AGGCAGCAAC 
AAGAGCCAGG AAAGGGAGCT GGCCACTCCC GACTGGACAG AGCGCCAGCT AGCCCACGGT 
GGTCTGGCAG AGGTACTTCA GGTTGTCAGT GACTGCAGGC GACCAGGAGA GACACAGGTG 
GTCGCTGTGC TGGGCAAGGC TGGCCAGGGA AAGAGCCACT GGGCCAGGAC AGTGAGTCAC 
ACCTGGGCAT GTGGCCAGTT GCTACAATAT GACTTTGTCT TCTATGTCCC CTGTCATTGC 
TTGGATCGTC CCGGGGACAC CTACCACCTG CGGGATCTGC TCTGTCCCCC GAGCCTGCAG 
CCACTGGCCA TGGATGACGA GGTCCTTGAT TATATCGTGA GGCAGCCAGA CCGTGTTCTG 
CTCATCCTAG ATGCTTTCGA GGAGCTAGAG GCCCAAGATG GCCTCCTGCA CGGACCCTGT 
GGATCTCTGT CCCCAGAGCC CTGCTCCCTC CGAGGACTGC TGGCTGGGAT CTTCCAGCGG 
AAGCTACTGC GAGGCTGCAC ACTGCTCCTC ACAGCCCGGC CCCGGGGCCG CCTGGCTCAG 
AGCCTGAGCA AGGCAGATGC CATCTTTGAG GTGCCCAGCT TCTCTACCAA GCAGGCCAAG 
ACTTACATGA GGCACTACTT TGAGAACTCA GGGACAGCGG GGAACCAAGA CAAGGCCCTG 
GGCCTCCTGG AGGGCCAGCC TCTTCTCTGC AGCTATAGTC ACAGCCCTGT TGTGTGCAGG 
GCTGTGTGCC AGCTCTCCAA GGCCCTGCTA GAACAGGGCA CAGAGGCCCA GCTACCTTGT 
ACACTTACAG GACTCTATGT CAGCCTGCTA GGTCCTGCAG CTCAGAACAG TCCTCCCGGA 
GCCTTAGTCG AGCTGGCCAA GCTGGCCTGG GAGCTGGGAC GAAGACACCA AAGCACCTTG 
CAAGAAACCC GGTTTTCATC CGTGGAGGTG AAAACCTGGG CAGTGACCCA AGGCTTGATG 
CAGCAGACCC TGGAGACCAC GGAGGCTCAA CTGGCCTTCT CCAGTTTTCT GCTACAGTGT 
TTCCTGGGTG CTGTGTGGCT GGCACAGTGC AATGAAATCA AAGACAAGGA GCTGCCACAG 
TACCTGGCCT TGACTCCGAG GAAGAAGAGA CCCTATGACA ACTGGCTGGA GGGTGTACCA 
CGCTTTCTGG CTGGATTAGT TTTCCAGCCT CGAGCCCACT GCCTGGGAGC TCTGGTGGAG 
CCTGCAGTGG CTGCAGTGGC GGATAGGAAA CAGAAGGTTC TTACCAGGTA CCTGAAGCGC 
CTGAAGCTGG GGACACTCCG GGCAGGGAGG CTGCTGGAGC TGCTCCACTG TGCCCACGAG 
ACACAGCAAC CTGGGATATG GGAGCATGTT GCACACCAGC TCCCTGGCCA CCTCTCCTTC 
CTGGGCACCC GGCTCACACC CCCAGATGTG TATGTGCTGG GCAGGGCCTT GGAGACAGCC 
AGCCAGGACT TCTCCTTGGA CCTTCGTCAG ACTGGCGTTG AGCCTTCTGG ACTGGGAAAC 
CTCGTGGGAC TCAGCTGTGT CACCAGTTTC AGGGCCTCCT TGAGTGATAC AATGGCATTA 
TGGGAGTCCC TTCAGCAGCA GGGAGAAGCC CAGCTACTCC AGGCGGCAGA GGAGAAGTTC 
ACCATTGAGC CATTTAAAGC CAAATCCCCA AAGGATGTGG AAGACCTGGA TCGTCTCGTG 
CAGACCCAGA GGCTGAGAAA CCCCTCAGAA GATGCAGCCA AGGATCTTCC TGCCATCCGG 
GACCTTAAGA AGCTAGAGTT TGCGTTGGGC CCCATCTTGG GCCCCCAGGC TTTCCCCACA 
CTGGCAAAGA TCCTTCCAGC CTTCTCTTCT CTGCAACACC TGGACCTGGA CTCACTTAGT 
GAGAACAAGA TCGGAGACAA GGGTGTGTCG AAGCTCTCAG CCACCTTCCC TCAGCTGAAG 
GCCCTGGAGA CGCTCAACTT GTCCCAAAAC AACATCACTG ATGTGGGTGC CTGCAAGCTT 
GCAGAAGCTC TGCCAGCCCT AGCCAAGTCC CTCCTAAGGC TGAGCTTGTA CAATAACTGC 
ATCTGTGACA AAGGAGCCAA GAGCCTGGCA CAAGTACTTC CGGACATGGT GTCCCTGCGT 
GTGATGGATG TCCAGTTCAA CAAGTTCACG GCTGCCGGTG CCCAGCAACT GGCCTCCAGC 
CTTCAGAAGT GCCCTCAGGT GGAAACACTG GCAATGTGGA CACCCACTAT CCCCTTTGGG 
GTTCAGGAAC ACCTGCAGCA GCTGGATGCC AGGATCAGTC TGAGATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001230690.1
CDS	42..3269
Translation	MQAALRSTGHSHSRDHSLCATMDLGSPEGSYLELLNSDADPLHLYHLYDQMDLAGEEEIELSSEPDTDTINCDQFSKLLQDMELDEETREAYANIAELDQYVFQDTQLEGLSKDLFIEHIGAEEGFGENIEIPVEAGQKPQKRRFPEEHAMDSKHRKLVPTSRTSLNYLDLPTGHIQIFTTLPQGLWQISGAGTGLSSVLIYHGEMPQVNQVLPSSSLSIPSLPESPDRPGSTSPFTPSAADLPSMPEPALTSRVNETEDTSPSPCQEGPESSIKLPKWPEAVERFQHSLQDKYKALPQSPRGPLVAVELVRARLERGSNKSQERELATPDWTERQLAHGGLAEVLQVVSDCRRPGETQVVAVLGKAGQGKSHWARTVSHTWACGQLLQYDFVFYVPCHCLDRPGDTYHLRDLLCPPSLQPLAMDDEVLDYIVRQPDRVLLILDAFEELEAQDGLLHGPCGSLSPEPCSLRGLLAGIFQRKLLRGCTLLLTARPRGRLAQSLSKADAIFEVPSFSTKQAKTYMRHYFENSGTAGNQDKALGLLEGQPLLCSYSHSPVVCRAVCQLSKALLEQGTEAQLPCTLTGLYVSLLGPAAQNSPPGALVELAKLAWELGRRHQSTLQETRFSSVEVKTWAVTQGLMQQTLETTEAQLAFSSFLLQCFLGAVWLAQCNEIKDKELPQYLALTPRKKRPYDNWLEGVPRFLAGLVFQPRAHCLGALVEPAVAAVADRKQKVLTRYLKRLKLGTLRAGRLLELLHCAHETQQPGIWEHVAHQLPGHLSFLGTRLTPPDVYVLGRALETASQDFSLDLRQTGVEPSGLGNLVGLSCVTSFRASLSDTMALWESLQQQGEAQLLQAAEEKFTIEPFKAKSPKDVEDLDRLVQTQRLRNPSEDAAKDLPAIRDLKKLEFALGPILGPQAFPTLAKILPAFSSLQHLDLDSLSENKIGDKGVSKLSATFPQLKALETLNLSQNNITDVGACKLAEALPALAKSLLRLSLYNNCICDKGAKSLAQVLPDMVSLRVMDVQFNKFTAAGAQQLASSLQKCPQVETLAMWTPTIPFGVQEHLQQLDARISLR

Target ORF information:

RefSeq Version	NM_001243761.2
Organism	Mus musculus(house mouse)
Definition	Mus musculus class II transactivator (Ciita), transcript variant 3, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001243761.2

ORF Insert Sequence:

ATGCAGGCAG CACTCAGAAG CACGGGGCAC AGCCACAGCC GCGACCATAG TCTGTGTGCC 
ACCATGGATC TGGGATCTCC AGAGGGCAGC TACCTGGAAC TCCTTAACAG TGATGCCGAC 
CCCCTACATC TCTACCACCT CTATGACCAG ATGGACCTGG CTGGGGAGGA GGAGATCGAA 
CTCAGCTCAG AGCCAGACAC AGATACCATC AACTGCGACC AGTTCAGCAA GCTGTTGCAG 
GACATGGAAC TGGATGAAGA GACCCGGGAG GCCTATGCCA ACATTGCGGA ACTGGATCAG 
TACGTGTTCC AGGATACCCA GCTCGAGGGC CTGAGCAAGG ACCTCTTCAT AGAGCACATT 
GGAGCAGAGG AAGGCTTTGG TGAGAACATA GAGATCCCTG TAGAAGCAGG ACAGAAGCCT 
CAGAAGAGAC GCTTCCCGGA AGAGCATGCT ATGGACTCAA AGCACAGGAA GCTAGTGCCC 
ACCTCTAGGA CCTCACTGAA CTATTTGGAT CTCCCCACTG GGCACATCCA GATCTTCACC 
ACTCTGCCCC AGGGACTCTG GCAAATCTCA GGGGCTGGCA CAGGTCTCTC CAGTGTCCTA 
ATCTACCACG GTGAGATGCC CCAGGTCAAC CAAGTGCTCC CTTCAAGCAG CCTCAGTATC 
CCCAGTCTCC CCGAGTCCCC AGACCGGCCT GGCTCCACCA GCCCCTTCAC ACCATCTGCA 
GCTGACCTGC CCAGCATGCC CGAACCTGCG CTGACCTCCC GTGTAAATGA GACAGAGGAC 
ACATCTCCCT CCCCATGCCA AGAGGGTCCC GAGTCTTCCA TCAAGCTTCC AAAATGGCCA 
GAGGCTGTGG AGCGATTCCA GCACTCCCTA CAGGACAAAT ACAAGGCATT GCCCCAGAGC 
CCAAGGGGTC CTCTGGTGGC CGTGGAGCTG GTACGGGCCA GGCTGGAAAG AGGCAGCAAC 
AAGAGCCAGG AAAGGGAGCT GGCCACTCCC GACTGGACAG AGCGCCAGCT AGCCCACGGT 
GGTCTGGCAG AGGTACTTCA GGTTGTCAGT GACTGCAGGC GACCAGGAGA GACACAGGTG 
GTCGCTGTGC TGGGCAAGGC TGGCCAGGGA AAGAGCCACT GGGCCAGGAC AGTGAGTCAC 
ACCTGGGCAT GTGGCCAGTT GCTACAATAT GACTTTGTCT TCTATGTCCC CTGTCATTGC 
TTGGATCGTC CCGGGGACAC CTACCACCTG CGGGATCTGC TCTGTCCCCC GAGCCTGCAG 
CCACTGGCCA TGGATGACGA GGTCCTTGAT TATATCGTGA GGCAGCCAGA CCGTGTTCTG 
CTCATCCTAG ATGCTTTCGA GGAGCTAGAG GCCCAAGATG GCCTCCTGCA CGGACCCTGT 
GGATCTCTGT CCCCAGAGCC CTGCTCCCTC CGAGGACTGC TGGCTGGGAT CTTCCAGCGG 
AAGCTACTGC GAGGCTGCAC ACTGCTCCTC ACAGCCCGGC CCCGGGGCCG CCTGGCTCAG 
AGCCTGAGCA AGGCAGATGC CATCTTTGAG GTGCCCAGCT TCTCTACCAA GCAGGCCAAG 
ACTTACATGA GGCACTACTT TGAGAACTCA GGGACAGCGG GGAACCAAGA CAAGGCCCTG 
GGCCTCCTGG AGGGCCAGCC TCTTCTCTGC AGCTATAGTC ACAGCCCTGT TGTGTGCAGG 
GCTGTGTGCC AGCTCTCCAA GGCCCTGCTA GAACAGGGCA CAGAGGCCCA GCTACCTTGT 
ACACTTACAG GACTCTATGT CAGCCTGCTA GGTCCTGCAG CTCAGAACAG TCCTCCCGGA 
GCCTTAGTCG AGCTGGCCAA GCTGGCCTGG GAGCTGGGAC GAAGACACCA AAGCACCTTG 
CAAGAAACCC GGTTTTCATC CGTGGAGGTG AAAACCTGGG CAGTGACCCA AGGCTTGATG 
CAGCAGACCC TGGAGACCAC GGAGGCTCAA CTGGCCTTCT CCAGTTTTCT GCTACAGTGT 
TTCCTGGGTG CTGTGTGGCT GGCACAGTGC AATGAAATCA AAGACAAGGA GCTGCCACAG 
TACCTGGCCT TGACTCCGAG GAAGAAGAGA CCCTATGACA ACTGGCTGGA GGGTGTACCA 
CGCTTTCTGG CTGGATTAGT TTTCCAGCCT CGAGCCCACT GCCTGGGAGC TCTGGTGGAG 
CCTGCAGTGG CTGCAGTGGC GGATAGGAAA CAGAAGGTTC TTACCAGGTA CCTGAAGCGC 
CTGAAGCTGG GGACACTCCG GGCAGGGAGG CTGCTGGAGC TGCTCCACTG TGCCCACGAG 
ACACAGCAAC CTGGGATATG GGAGCATGTT GCACACCAGC TCCCTGGCCA CCTCTCCTTC 
CTGGGCACCC GGCTCACACC CCCAGATGTG TATGTGCTGG GCAGGGCCTT GGAGACAGCC 
AGCCAGGACT TCTCCTTGGA CCTTCGTCAG ACTGGCGTTG AGCCTTCTGG ACTGGGAAAC 
CTCGTGGGAC TCAGCTGTGT CACCAGTTTC AGGGCCTCCT TGAGTGATAC AATGGCATTA 
TGGGAGTCCC TTCAGCAGCA GGGAGAAGCC CAGCTACTCC AGGCGGCAGA GGAGAAGTTC 
ACCATTGAGC CATTTAAAGC CAAATCCCCA AAGGATGTGG AAGACCTGGA TCGTCTCGTG 
CAGACCCAGA GGCTGAGAAA CCCCTCAGAA GATGCAGCCA AGGATCTTCC TGCCATCCGG 
GACCTTAAGA AGCTAGAGTT TGCGTTGGGC CCCATCTTGG GCCCCCAGGC TTTCCCCACA 
CTGGCAAAGA TCCTTCCAGC CTTCTCTTCT CTGCAACACC TGGACCTGGA CTCACTTAGT 
GAGAACAAGA TCGGAGACAA GGGTGTGTCG AAGCTCTCAG CCACCTTCCC TCAGCTGAAG 
GCCCTGGAGA CGCTCAACTT GTCCCAAAAC AACATCACTG ATGTGGGTGC CTGCAAGCTT 
GCAGAAGCTC TGCCAGCCCT AGCCAAGTCC CTCCTAAGGC TGAGCTTGTA CAATAACTGC 
ATCTGTGACA AAGGAGCCAA GAGCCTGGCA CAAGTACTTC CGGACATGGT GTCCCTGCGT 
GTGATGGATG TCCAGTTCAA CAAGTTCACG GCTGCCGGTG CCCAGCAACT GGCCTCCAGC 
CTTCAGAAGT GCCCTCAGGT GGAAACACTG GCAATGTGGA CACCCACTAT CCCCTTTGGG 
GTTCAGGAAC ACCTGCAGCA GCTGGATGCC AGGATCAGTC TGAGATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Ciita ( XM_006521724.2 ) cDNA ORF clone, Mus musculus(house mouse) -> XP_006521787.1 Mus musculus class II transactivator (Ciita), transcript variant X2, mRNA.

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CloneID	OMu51823
Clone ID Related Accession (Same CDS sequence)	XM_006521724.2
Accession Version	XM_006521724.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3222bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-08-07
Organism	Mus musculus(house mouse)
Product	MHC class II transactivator isoform X2
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000082.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 22, 2016 this sequence version replaced XM_006521724.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGAACCACT TCCAGGCCAT CCTGGCCCAA GTACAGACAC TGCTCTCCAG CCAGAAGCCC 
AGGCAGGTGC GGGCCCTCCT GGATGGCCTG CTGGAAGAAG AGCTGCTCTC ACGGGAATAC 
CACTGTGCCT TGCTGCATGA GCCTGATGGT GATGCCCTGG CCCGGAAGAT TTCCCTGACC 
CTGCTGGAGA AAGGGGACTT AGACTTGACT TTCTTGAGCT GGGTCTGCAA CAGTCTGCAG 
GCTCCCACGG TAGAGAGGGG CACCAGCTAC AGGGACCATG GAGACCATAG TCTGTGTGCC 
ACCATGGATC TGGGATCTCC AGAGGGCAGC TACCTGGAAC TCCTTAACAG TGATGCCGAC 
CCCCTACATC TCTACCACCT CTATGACCAG ATGGACCTGG CTGGGGAGGA GGAGATCGAA 
CTCAGCTCAG AGCCAGACAC AGATACCATC AACTGCGACC AGTTCAGCAA GCTGTTGCAG 
GACATGGAAC TGGATGAAGA GACCCGGGAG GCCTATGCCA ACATTGCGGA ACTGGATCAG 
TACGTGTTCC AGGATACCCA GCTCGAGGGC CTGAGCAAGG ACCTCTTCAT AGAGCACATT 
GGAGCAGAGG AAGGCTTTGG TGAGAACATA GAGATCCCTG TAGAAGCAGG ACAGAAGCCT 
CAGAAGAGAC GCTTCCCGGA AGAGCATGCT ATGGACTCAA AGCACAGGAA GCTAGTGCCC 
ACCTCTAGGA CCTCACTGAA CTATTTGGAT CTCCCCACTG GGCACATCCA GATCTTCACC 
ACTCTGCCCC AGGGACTCTG GCAAATCTCA GGGGCTGGCA CAGGTCTCTC CAGTGTCCTA 
ATCTACCACG GTGAGATGCC CCAGGTCAAC CAAGTGCTCC CTTCAAGCAG CCTCAGTATC 
CCCAGTCTCC CCGAGTCCCC AGACCGGCCT GGCTCCACCA GCCCCTTCAC ACCATCTGCA 
GCTGACCTGC CCAGCATGCC CGAACCTGCG CTGACCTCCC GTGTAAATGA GACAGAGGAC 
ACATCTCCCT CCCCATGCCA AGAGGGTCCC GAGTCTTCCA TCAAGCTTCC AAAATGGCCA 
GAGGCTGTGG AGCGATTCCA GCACTCCCTA CAGGACAAAT ACAAGGCATT GCCCCAGAGC 
CCAAGGGGTC CTCTGGTGGC CGTGGAGCTG GTACGGGCCA GGCTGGAAAG AGGCAGCAAC 
AAGAGCCAGG AAAGGGAGCT GGCCACTCCC GACTGGACAG AGCGCCAGCT AGCCCACGGT 
GGTCTGGCAG AGGTACTTCA GGTTGTCAGT GACTGCAGGC GACCAGGAGA GACACAGGTG 
GTCGCTGTGC TGGGCAAGGC TGGCCAGGGA AAGAGCCACT GGGCCAGGAC AGTGAGTCAC 
ACCTGGGCAT GTGGCCAGTT GCTACAATAT GACTTTGTCT TCTATGTCCC CTGTCATTGC 
TTGGATCGTC CCGGGGACAC CTACCACCTG CGGGATCTGC TCTGTCCCCC GAGCCTGCAG 
CCACTGGCCA TGGATGACGA GGTCCTTGAT TATATCGTGA GGCAGCCAGA CCGTGTTCTG 
CTCATCCTAG ATGCTTTCGA GGAGCTAGAG GCCCAAGATG GCCTCCTGCA CGGACCCTGT 
GGATCTCTGT CCCCAGAGCC CTGCTCCCTC CGAGGACTGC TGGCTGGGAT CTTCCAGCGG 
AAGCTACTGC GAGGCTGCAC ACTGCTCCTC ACAGCCCGGC CCCGGGGCCG CCTGGCTCAG 
AGCCTGAGCA AGGCAGATGC CATCTTTGAG GTGCCCAGCT TCTCTACCAA GCAGGCCAAG 
ACTTACATGA GGCACTACTT TGAGAACTCA GGGACAGCGG GGAACCAAGA CAAGGCCCTG 
GGCCTCCTGG AGGGCCAGCC TCTTCTCTGC AGCTATAGTC ACAGCCCTGT TGTGTGCAGG 
GCTGTGTGCC AGCTCTCCAA GGCCCTGCTA GAACAGGGCA CAGAGGCCCA GCTACCTTGT 
ACACTTACAG GACTCTATGT CAGCCTGCTA GGTCCTGCAG CTCAGAACAG TCCTCCCGGA 
GCCTTAGTCG AGCTGGCCAA GCTGGCCTGG GAGCTGGGAC GAAGACACCA AAGCACCTTG 
CAAGAAACCC GGTTTTCATC CGTGGAGGTG AAAACCTGGG CAGTGACCCA AGGCTTGATG 
CAGCAGACCC TGGAGACCAC GGAGGCTCAA CTGGCCTTCT CCAGTTTTCT GCTACAGTGT 
TTCCTGGGTG CTGTGTGGCT GGCACAGTGC AATGAAATCA AAGACAAGGA GCTGCCACAG 
TACCTGGCCT TGACTCCGAG GAAGAAGAGA CCCTATGACA ACTGGCTGGA GGGTGTACCA 
CGCTTTCTGG CTGGATTAGT TTTCCAGCCT CGAGCCCACT GCCTGGGAGC TCTGGTGGAG 
CCTGCAGTGG CTGCAGTGGC GGATAGGAAA CAGAAGGTTC TTACCAGGTA CCTGAAGCGC 
CTGAAGCTGG GGACACTCCG GGCAGGGAGG CTGCTGGAGC TGCTCCACTG TGCCCACGAG 
ACACAGCAAC CTGGGATATG GGAGCATGTT GCACACCAGC TCCCTGGCCA CCTCTCCTTC 
CTGGGCACCC GGCTCACACC CCCAGATGTG TATGTGCTGG GCAGGGCCTT GGAGACAGCC 
AGCCAGGACT TCTCCTTGGA CCTTCGTCAG ACTGGCGTTG AGCCTTCTGG ACTGGGAAAC 
CTCGTGGGAC TCAGCTGTGT CACCAGTTTC AGGGCCTCCT TGAGTGATAC AATGGCATTA 
TGGGAGTCCC TTCAGCAGCA GGGAGAAGCC CAGCTACTCC AGGCGGCAGA GGAGAAGTTC 
ACCATTGAGC CATTTAAAGC CAAATCCCCA AAGGATGTGG AAGACCTGGA TCGTCTCGTG 
CAGACCCAGA GGCTGAGAAA CCCCTCAGAA GATGCAGCCA AGGATCTTCC TGCCATCCGG 
GACCTTAAGA AGCTAGAGTT TGCGTTGGGC CCCATCTTGG GCCCCCAGGC TTTCCCCACA 
CTGGCAAAGA TCCTTCCAGC CTTCTCTTCT CTGCAACACC TGGACCTGGA CTCACTTAGT 
GAGAACAAGA TCGGAGACAA GGGTGTGTCG AAGCTCTCAG CCACCTTCCC TCAGCTGAAG 
GCCCTGGAGA CGCTCAAGGC TGGCTATCAT GGCTGTGTGG CTACAGTCCC CTGTGAAGCA 
GCGAGTTTCC AGCCGGTGAG GAAGGGAGAG CCTTCCACTT AG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_006521787.1
CDS	131..3352
Translation	MNHFQAILAQVQTLLSSQKPRQVRALLDGLLEEELLSREYHCALLHEPDGDALARKISLTLLEKGDLDLTFLSWVCNSLQAPTVERGTSYRDHGDHSLCATMDLGSPEGSYLELLNSDADPLHLYHLYDQMDLAGEEEIELSSEPDTDTINCDQFSKLLQDMELDEETREAYANIAELDQYVFQDTQLEGLSKDLFIEHIGAEEGFGENIEIPVEAGQKPQKRRFPEEHAMDSKHRKLVPTSRTSLNYLDLPTGHIQIFTTLPQGLWQISGAGTGLSSVLIYHGEMPQVNQVLPSSSLSIPSLPESPDRPGSTSPFTPSAADLPSMPEPALTSRVNETEDTSPSPCQEGPESSIKLPKWPEAVERFQHSLQDKYKALPQSPRGPLVAVELVRARLERGSNKSQERELATPDWTERQLAHGGLAEVLQVVSDCRRPGETQVVAVLGKAGQGKSHWARTVSHTWACGQLLQYDFVFYVPCHCLDRPGDTYHLRDLLCPPSLQPLAMDDEVLDYIVRQPDRVLLILDAFEELEAQDGLLHGPCGSLSPEPCSLRGLLAGIFQRKLLRGCTLLLTARPRGRLAQSLSKADAIFEVPSFSTKQAKTYMRHYFENSGTAGNQDKALGLLEGQPLLCSYSHSPVVCRAVCQLSKALLEQGTEAQLPCTLTGLYVSLLGPAAQNSPPGALVELAKLAWELGRRHQSTLQETRFSSVEVKTWAVTQGLMQQTLETTEAQLAFSSFLLQCFLGAVWLAQCNEIKDKELPQYLALTPRKKRPYDNWLEGVPRFLAGLVFQPRAHCLGALVEPAVAAVADRKQKVLTRYLKRLKLGTLRAGRLLELLHCAHETQQPGIWEHVAHQLPGHLSFLGTRLTPPDVYVLGRALETASQDFSLDLRQTGVEPSGLGNLVGLSCVTSFRASLSDTMALWESLQQQGEAQLLQAAEEKFTIEPFKAKSPKDVEDLDRLVQTQRLRNPSEDAAKDLPAIRDLKKLEFALGPILGPQAFPTLAKILPAFSSLQHLDLDSLSENKIGDKGVSKLSATFPQLKALETLKAGYHGCVATVPCEAASFQPVRKGEPST

Target ORF information:

RefSeq Version	XM_006521724.2
Organism	Mus musculus(house mouse)
Definition	Mus musculus class II transactivator (Ciita), transcript variant X2, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_006521724.2

ORF Insert Sequence:

ATGAACCACT TCCAGGCCAT CCTGGCCCAA GTACAGACAC TGCTCTCCAG CCAGAAGCCC 
AGGCAGGTGC GGGCCCTCCT GGATGGCCTG CTGGAAGAAG AGCTGCTCTC ACGGGAATAC 
CACTGTGCCT TGCTGCATGA GCCTGATGGT GATGCCCTGG CCCGGAAGAT TTCCCTGACC 
CTGCTGGAGA AAGGGGACTT AGACTTGACT TTCTTGAGCT GGGTCTGCAA CAGTCTGCAG 
GCTCCCACGG TAGAGAGGGG CACCAGCTAC AGGGACCATG GAGACCATAG TCTGTGTGCC 
ACCATGGATC TGGGATCTCC AGAGGGCAGC TACCTGGAAC TCCTTAACAG TGATGCCGAC 
CCCCTACATC TCTACCACCT CTATGACCAG ATGGACCTGG CTGGGGAGGA GGAGATCGAA 
CTCAGCTCAG AGCCAGACAC AGATACCATC AACTGCGACC AGTTCAGCAA GCTGTTGCAG 
GACATGGAAC TGGATGAAGA GACCCGGGAG GCCTATGCCA ACATTGCGGA ACTGGATCAG 
TACGTGTTCC AGGATACCCA GCTCGAGGGC CTGAGCAAGG ACCTCTTCAT AGAGCACATT 
GGAGCAGAGG AAGGCTTTGG TGAGAACATA GAGATCCCTG TAGAAGCAGG ACAGAAGCCT 
CAGAAGAGAC GCTTCCCGGA AGAGCATGCT ATGGACTCAA AGCACAGGAA GCTAGTGCCC 
ACCTCTAGGA CCTCACTGAA CTATTTGGAT CTCCCCACTG GGCACATCCA GATCTTCACC 
ACTCTGCCCC AGGGACTCTG GCAAATCTCA GGGGCTGGCA CAGGTCTCTC CAGTGTCCTA 
ATCTACCACG GTGAGATGCC CCAGGTCAAC CAAGTGCTCC CTTCAAGCAG CCTCAGTATC 
CCCAGTCTCC CCGAGTCCCC AGACCGGCCT GGCTCCACCA GCCCCTTCAC ACCATCTGCA 
GCTGACCTGC CCAGCATGCC CGAACCTGCG CTGACCTCCC GTGTAAATGA GACAGAGGAC 
ACATCTCCCT CCCCATGCCA AGAGGGTCCC GAGTCTTCCA TCAAGCTTCC AAAATGGCCA 
GAGGCTGTGG AGCGATTCCA GCACTCCCTA CAGGACAAAT ACAAGGCATT GCCCCAGAGC 
CCAAGGGGTC CTCTGGTGGC CGTGGAGCTG GTACGGGCCA GGCTGGAAAG AGGCAGCAAC 
AAGAGCCAGG AAAGGGAGCT GGCCACTCCC GACTGGACAG AGCGCCAGCT AGCCCACGGT 
GGTCTGGCAG AGGTACTTCA GGTTGTCAGT GACTGCAGGC GACCAGGAGA GACACAGGTG 
GTCGCTGTGC TGGGCAAGGC TGGCCAGGGA AAGAGCCACT GGGCCAGGAC AGTGAGTCAC 
ACCTGGGCAT GTGGCCAGTT GCTACAATAT GACTTTGTCT TCTATGTCCC CTGTCATTGC 
TTGGATCGTC CCGGGGACAC CTACCACCTG CGGGATCTGC TCTGTCCCCC GAGCCTGCAG 
CCACTGGCCA TGGATGACGA GGTCCTTGAT TATATCGTGA GGCAGCCAGA CCGTGTTCTG 
CTCATCCTAG ATGCTTTCGA GGAGCTAGAG GCCCAAGATG GCCTCCTGCA CGGACCCTGT 
GGATCTCTGT CCCCAGAGCC CTGCTCCCTC CGAGGACTGC TGGCTGGGAT CTTCCAGCGG 
AAGCTACTGC GAGGCTGCAC ACTGCTCCTC ACAGCCCGGC CCCGGGGCCG CCTGGCTCAG 
AGCCTGAGCA AGGCAGATGC CATCTTTGAG GTGCCCAGCT TCTCTACCAA GCAGGCCAAG 
ACTTACATGA GGCACTACTT TGAGAACTCA GGGACAGCGG GGAACCAAGA CAAGGCCCTG 
GGCCTCCTGG AGGGCCAGCC TCTTCTCTGC AGCTATAGTC ACAGCCCTGT TGTGTGCAGG 
GCTGTGTGCC AGCTCTCCAA GGCCCTGCTA GAACAGGGCA CAGAGGCCCA GCTACCTTGT 
ACACTTACAG GACTCTATGT CAGCCTGCTA GGTCCTGCAG CTCAGAACAG TCCTCCCGGA 
GCCTTAGTCG AGCTGGCCAA GCTGGCCTGG GAGCTGGGAC GAAGACACCA AAGCACCTTG 
CAAGAAACCC GGTTTTCATC CGTGGAGGTG AAAACCTGGG CAGTGACCCA AGGCTTGATG 
CAGCAGACCC TGGAGACCAC GGAGGCTCAA CTGGCCTTCT CCAGTTTTCT GCTACAGTGT 
TTCCTGGGTG CTGTGTGGCT GGCACAGTGC AATGAAATCA AAGACAAGGA GCTGCCACAG 
TACCTGGCCT TGACTCCGAG GAAGAAGAGA CCCTATGACA ACTGGCTGGA GGGTGTACCA 
CGCTTTCTGG CTGGATTAGT TTTCCAGCCT CGAGCCCACT GCCTGGGAGC TCTGGTGGAG 
CCTGCAGTGG CTGCAGTGGC GGATAGGAAA CAGAAGGTTC TTACCAGGTA CCTGAAGCGC 
CTGAAGCTGG GGACACTCCG GGCAGGGAGG CTGCTGGAGC TGCTCCACTG TGCCCACGAG 
ACACAGCAAC CTGGGATATG GGAGCATGTT GCACACCAGC TCCCTGGCCA CCTCTCCTTC 
CTGGGCACCC GGCTCACACC CCCAGATGTG TATGTGCTGG GCAGGGCCTT GGAGACAGCC 
AGCCAGGACT TCTCCTTGGA CCTTCGTCAG ACTGGCGTTG AGCCTTCTGG ACTGGGAAAC 
CTCGTGGGAC TCAGCTGTGT CACCAGTTTC AGGGCCTCCT TGAGTGATAC AATGGCATTA 
TGGGAGTCCC TTCAGCAGCA GGGAGAAGCC CAGCTACTCC AGGCGGCAGA GGAGAAGTTC 
ACCATTGAGC CATTTAAAGC CAAATCCCCA AAGGATGTGG AAGACCTGGA TCGTCTCGTG 
CAGACCCAGA GGCTGAGAAA CCCCTCAGAA GATGCAGCCA AGGATCTTCC TGCCATCCGG 
GACCTTAAGA AGCTAGAGTT TGCGTTGGGC CCCATCTTGG GCCCCCAGGC TTTCCCCACA 
CTGGCAAAGA TCCTTCCAGC CTTCTCTTCT CTGCAACACC TGGACCTGGA CTCACTTAGT 
GAGAACAAGA TCGGAGACAA GGGTGTGTCG AAGCTCTCAG CCACCTTCCC TCAGCTGAAG 
GCCCTGGAGA CGCTCAAGGC TGGCTATCAT GGCTGTGTGG CTACAGTCCC CTGTGAAGCA 
GCGAGTTTCC AGCCGGTGAG GAAGGGAGAG CCTTCCACTT AG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Ciita ( XM_006521726.3 ) cDNA ORF clone, Mus musculus(house mouse) -> XP_006521789.1 Mus musculus class II transactivator (Ciita), transcript variant X4, mRNA.

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CloneID	OMu51825
Clone ID Related Accession (Same CDS sequence)	XM_006521726.3 , XM_006521726.4
Accession Version	XM_006521726.3	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3165bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-06-21
Organism	Mus musculus(house mouse)
Product	MHC class II transactivator isoform X3
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000082.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 22, 2016 this sequence version replaced XM_006521726.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGAACCACT TCCAGGCCAT CCTGGCCCAA GTACAGACAC TGCTCTCCAG CCAGAAGCCC 
AGGCAGGTGC GGGCCCTCCT GGATGGCCTG CTGGAAGAAG AGCTGCTCTC ACGGGAATAC 
CACTGTGCCT TGCTGCATGA GCCTGATGGT GATGCCCTGG CCCGGAAGAT TTCCCTGACC 
CTGCTGGAGA AAGGGGACTT AGACTTGACT TTCTTGAGCT GGGTCTGCAA CAGTCTGCAG 
GCTCCCACGG TAGAGAGGGG CACCAGCTAC AGGGACCATG GAGACCATAG TCTGTGTGCC 
ACCATGGATC TGGGATCTCC AGAGGGCAGC TACCTGGAAC TCCTTAACAG TGATGCCGAC 
CCCCTACATC TCTACCACCT CTATGACCAG ATGGACCTGG CTGGGGAGGA GGAGATCGAA 
CTCAGCTCAG AGCCAGACAC AGATACCATC AACTGCGACC AGTTCAGCAA GCTGTTGCAG 
GACATGGAAC TGGATGAAGA GACCCGGGAG GCCTATGCCA ACATTGCGGA ACTGGATCAG 
TACGTGTTCC AGGATACCCA GCTCGAGGGC CTGAGCAAGG ACCTCTTCAT AGAGCACATT 
GGAGCAGAGG AAGGCTTTGG TGAGAACATA GAGATCCCTG TAGAAGCAGG ACAGAAGCCT 
CAGAAGAGAC GCTTCCCGGA AGAGCATGCT ATGGACTCAA AGCACAGGAA GCTAGTGCCC 
ACCTCTAGGA CCTCACTGAA CTATTTGGAT CTCCCCACTG GGCACATCCA GATCTTCACC 
ACTCTGCCCC AGGGACTCTG GCAAATCTCA GGGGCTGGCA CAGGTCTCTC CAGTGTCCTA 
ATCTACCACG GTGAGATGCC CCAGGTCAAC CAAGTGCTCC CTTCAAGCAG CCTCAGTATC 
CCCAGTCTCC CCGAGTCCCC AGACCGGCCT GGCTCCACCA GCCCCTTCAC ACCATCTGCA 
GCTGACCTGC CCAGCATGCC CGAACCTGCG CTGACCTCCC GTGTAAATGA GACAGAGGAC 
ACATCTCCCT CCCCATGCCA AGAGGGTCCC GAGTCTTCCA TCAAGCTTCC AAAATGGCCA 
GAGGCTGTGG AGCGATTCCA GCACTCCCTA CAGGACAAAT ACAAGGCATT GCCCCAGAGC 
CCAAGGGGTC CTCTGGTGGC CGTGGAGCTG GTACGGGCCA GGCTGGAAAG AGGCAGCAAC 
AAGAGCCAGG AAAGGGAGCT GGCCACTCCC GACTGGACAG AGCGCCAGCT AGCCCACGGT 
GGTCTGGCAG AGGTACTTCA GGTTGTCAGT GACTGCAGGC GACCAGGAGA GACACAGGTG 
GTCGCTGTGC TGGGCAAGGC TGGCCAGGGA AAGAGCCACT GGGCCAGGAC AGTGAGTCAC 
ACCTGGGCAT GTGGCCAGTT GCTACAATAT GACTTTGTCT TCTATGTCCC CTGTCATTGC 
TTGGATCGTC CCGGGGACAC CTACCACCTG CGGGATCTGC TCTGTCCCCC GAGCCTGCAG 
CCACTGGCCA TGGATGACGA GGTCCTTGAT TATATCGTGA GGCAGCCAGA CCGTGTTCTG 
CTCATCCTAG ATGCTTTCGA GGAGCTAGAG GCCCAAGATG GCCTCCTGCA CGGACCCTGT 
GGATCTCTGT CCCCAGAGCC CTGCTCCCTC CGAGGACTGC TGGCTGGGAT CTTCCAGCGG 
AAGCTACTGC GAGGCTGCAC ACTGCTCCTC ACAGCCCGGC CCCGGGGCCG CCTGGCTCAG 
AGCCTGAGCA AGGCAGATGC CATCTTTGAG GTGCCCAGCT TCTCTACCAA GCAGGCCAAG 
ACTTACATGA GGCACTACTT TGAGAACTCA GGGACAGCGG GGAACCAAGA CAAGGCCCTG 
GGCCTCCTGG AGGGCCAGCC TCTTCTCTGC AGCTATAGTC ACAGCCCTGT TGTGTGCAGG 
GCTGTGTGCC AGCTCTCCAA GGCCCTGCTA GAACAGGGCA CAGAGGCCCA GCTACCTTGT 
ACACTTACAG GACTCTATGT CAGCCTGCTA GGTCCTGCAG CTCAGAACAG TCCTCCCGGA 
GCCTTAGTCG AGCTGGCCAA GCTGGCCTGG GAGCTGGGAC GAAGACACCA AAGCACCTTG 
CAAGAAACCC GGTTTTCATC CGTGGAGGTG AAAACCTGGG CAGTGACCCA AGGCTTGATG 
CAGCAGACCC TGGAGACCAC GGAGGCTCAA CTGGCCTTCT CCAGTTTTCT GCTACAGTGT 
TTCCTGGGTG CTGTGTGGCT GGCACAGTGC AATGAAATCA AAGACAAGGA GCTGCCACAG 
TACCTGGCCT TGACTCCGAG GAAGAAGAGA CCCTATGACA ACTGGCTGGA GGGTGTACCA 
CGCTTTCTGG CTGGATTAGT TTTCCAGCCT CGAGCCCACT GCCTGGGAGC TCTGGTGGAG 
CCTGCAGTGG CTGCAGTGGC GGATAGGAAA CAGAAGGTTC TTACCAGGTA CCTGAAGCGC 
CTGAAGCTGG GGACACTCCG GGCAGGGAGG CTGCTGGAGC TGCTCCACTG TGCCCACGAG 
ACACAGCAAC CTGGGATATG GGAGCATGTT GCACACCAGC TCCCTGGCCA CCTCTCCTTC 
CTGGGCACCC GGCTCACACC CCCAGATGTG TATGTGCTGG GCAGGGCCTT GGAGACAGCC 
AGCCAGGACT TCTCCTTGGA CCTTCGTCAG ACTGGCGTTG AGCCTTCTGG ACTGGGAAAC 
CTCGTGGGAC TCAGCTGTGT CACCAGTTTC AGGGCCTCCT TGAGTGATAC AATGGCATTA 
TGGGAGTCCC TTCAGCAGCA GGGAGAAGCC CAGCTACTCC AGGCGGCAGA GGAGAAGTTC 
ACCATTGAGC CATTTAAAGC CAAATCCCCA AAGGATGTGG AAGACCTGGA TCGTCTCGTG 
CAGACCCAGA GGCTGAGAAA CCCCTCAGAA GATGCAGCCA AGGATCTTCC TGCCATCCGG 
GACCTTAAGA AGCTAGAGTT TGCGTTGGGC CCCATCTTGG GCCCCCAGGC TTTCCCCACA 
CTGGCAAAGA TCCTTCCAGC CTTCTCTTCT CTGCAACACC TGGACCTGGA CTCACTTAGT 
GAGAACAAGA TCGGAGACAA GGGTGTGTCG AAGCTCTCAG CCACCTTCCC TCAGCTGAAG 
GCCCTGGAGA CGCTCAAATC ATGCACTCTC CCATTCAGCC ACTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_006521789.1
CDS	131..3295
Translation	MNHFQAILAQVQTLLSSQKPRQVRALLDGLLEEELLSREYHCALLHEPDGDALARKISLTLLEKGDLDLTFLSWVCNSLQAPTVERGTSYRDHGDHSLCATMDLGSPEGSYLELLNSDADPLHLYHLYDQMDLAGEEEIELSSEPDTDTINCDQFSKLLQDMELDEETREAYANIAELDQYVFQDTQLEGLSKDLFIEHIGAEEGFGENIEIPVEAGQKPQKRRFPEEHAMDSKHRKLVPTSRTSLNYLDLPTGHIQIFTTLPQGLWQISGAGTGLSSVLIYHGEMPQVNQVLPSSSLSIPSLPESPDRPGSTSPFTPSAADLPSMPEPALTSRVNETEDTSPSPCQEGPESSIKLPKWPEAVERFQHSLQDKYKALPQSPRGPLVAVELVRARLERGSNKSQERELATPDWTERQLAHGGLAEVLQVVSDCRRPGETQVVAVLGKAGQGKSHWARTVSHTWACGQLLQYDFVFYVPCHCLDRPGDTYHLRDLLCPPSLQPLAMDDEVLDYIVRQPDRVLLILDAFEELEAQDGLLHGPCGSLSPEPCSLRGLLAGIFQRKLLRGCTLLLTARPRGRLAQSLSKADAIFEVPSFSTKQAKTYMRHYFENSGTAGNQDKALGLLEGQPLLCSYSHSPVVCRAVCQLSKALLEQGTEAQLPCTLTGLYVSLLGPAAQNSPPGALVELAKLAWELGRRHQSTLQETRFSSVEVKTWAVTQGLMQQTLETTEAQLAFSSFLLQCFLGAVWLAQCNEIKDKELPQYLALTPRKKRPYDNWLEGVPRFLAGLVFQPRAHCLGALVEPAVAAVADRKQKVLTRYLKRLKLGTLRAGRLLELLHCAHETQQPGIWEHVAHQLPGHLSFLGTRLTPPDVYVLGRALETASQDFSLDLRQTGVEPSGLGNLVGLSCVTSFRASLSDTMALWESLQQQGEAQLLQAAEEKFTIEPFKAKSPKDVEDLDRLVQTQRLRNPSEDAAKDLPAIRDLKKLEFALGPILGPQAFPTLAKILPAFSSLQHLDLDSLSENKIGDKGVSKLSATFPQLKALETLKSCTLPFSH

Target ORF information:

RefSeq Version	XM_006521726.3
Organism	Mus musculus(house mouse)
Definition	Mus musculus class II transactivator (Ciita), transcript variant X4, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_006521726.3

ORF Insert Sequence:

ATGAACCACT TCCAGGCCAT CCTGGCCCAA GTACAGACAC TGCTCTCCAG CCAGAAGCCC 
AGGCAGGTGC GGGCCCTCCT GGATGGCCTG CTGGAAGAAG AGCTGCTCTC ACGGGAATAC 
CACTGTGCCT TGCTGCATGA GCCTGATGGT GATGCCCTGG CCCGGAAGAT TTCCCTGACC 
CTGCTGGAGA AAGGGGACTT AGACTTGACT TTCTTGAGCT GGGTCTGCAA CAGTCTGCAG 
GCTCCCACGG TAGAGAGGGG CACCAGCTAC AGGGACCATG GAGACCATAG TCTGTGTGCC 
ACCATGGATC TGGGATCTCC AGAGGGCAGC TACCTGGAAC TCCTTAACAG TGATGCCGAC 
CCCCTACATC TCTACCACCT CTATGACCAG ATGGACCTGG CTGGGGAGGA GGAGATCGAA 
CTCAGCTCAG AGCCAGACAC AGATACCATC AACTGCGACC AGTTCAGCAA GCTGTTGCAG 
GACATGGAAC TGGATGAAGA GACCCGGGAG GCCTATGCCA ACATTGCGGA ACTGGATCAG 
TACGTGTTCC AGGATACCCA GCTCGAGGGC CTGAGCAAGG ACCTCTTCAT AGAGCACATT 
GGAGCAGAGG AAGGCTTTGG TGAGAACATA GAGATCCCTG TAGAAGCAGG ACAGAAGCCT 
CAGAAGAGAC GCTTCCCGGA AGAGCATGCT ATGGACTCAA AGCACAGGAA GCTAGTGCCC 
ACCTCTAGGA CCTCACTGAA CTATTTGGAT CTCCCCACTG GGCACATCCA GATCTTCACC 
ACTCTGCCCC AGGGACTCTG GCAAATCTCA GGGGCTGGCA CAGGTCTCTC CAGTGTCCTA 
ATCTACCACG GTGAGATGCC CCAGGTCAAC CAAGTGCTCC CTTCAAGCAG CCTCAGTATC 
CCCAGTCTCC CCGAGTCCCC AGACCGGCCT GGCTCCACCA GCCCCTTCAC ACCATCTGCA 
GCTGACCTGC CCAGCATGCC CGAACCTGCG CTGACCTCCC GTGTAAATGA GACAGAGGAC 
ACATCTCCCT CCCCATGCCA AGAGGGTCCC GAGTCTTCCA TCAAGCTTCC AAAATGGCCA 
GAGGCTGTGG AGCGATTCCA GCACTCCCTA CAGGACAAAT ACAAGGCATT GCCCCAGAGC 
CCAAGGGGTC CTCTGGTGGC CGTGGAGCTG GTACGGGCCA GGCTGGAAAG AGGCAGCAAC 
AAGAGCCAGG AAAGGGAGCT GGCCACTCCC GACTGGACAG AGCGCCAGCT AGCCCACGGT 
GGTCTGGCAG AGGTACTTCA GGTTGTCAGT GACTGCAGGC GACCAGGAGA GACACAGGTG 
GTCGCTGTGC TGGGCAAGGC TGGCCAGGGA AAGAGCCACT GGGCCAGGAC AGTGAGTCAC 
ACCTGGGCAT GTGGCCAGTT GCTACAATAT GACTTTGTCT TCTATGTCCC CTGTCATTGC 
TTGGATCGTC CCGGGGACAC CTACCACCTG CGGGATCTGC TCTGTCCCCC GAGCCTGCAG 
CCACTGGCCA TGGATGACGA GGTCCTTGAT TATATCGTGA GGCAGCCAGA CCGTGTTCTG 
CTCATCCTAG ATGCTTTCGA GGAGCTAGAG GCCCAAGATG GCCTCCTGCA CGGACCCTGT 
GGATCTCTGT CCCCAGAGCC CTGCTCCCTC CGAGGACTGC TGGCTGGGAT CTTCCAGCGG 
AAGCTACTGC GAGGCTGCAC ACTGCTCCTC ACAGCCCGGC CCCGGGGCCG CCTGGCTCAG 
AGCCTGAGCA AGGCAGATGC CATCTTTGAG GTGCCCAGCT TCTCTACCAA GCAGGCCAAG 
ACTTACATGA GGCACTACTT TGAGAACTCA GGGACAGCGG GGAACCAAGA CAAGGCCCTG 
GGCCTCCTGG AGGGCCAGCC TCTTCTCTGC AGCTATAGTC ACAGCCCTGT TGTGTGCAGG 
GCTGTGTGCC AGCTCTCCAA GGCCCTGCTA GAACAGGGCA CAGAGGCCCA GCTACCTTGT 
ACACTTACAG GACTCTATGT CAGCCTGCTA GGTCCTGCAG CTCAGAACAG TCCTCCCGGA 
GCCTTAGTCG AGCTGGCCAA GCTGGCCTGG GAGCTGGGAC GAAGACACCA AAGCACCTTG 
CAAGAAACCC GGTTTTCATC CGTGGAGGTG AAAACCTGGG CAGTGACCCA AGGCTTGATG 
CAGCAGACCC TGGAGACCAC GGAGGCTCAA CTGGCCTTCT CCAGTTTTCT GCTACAGTGT 
TTCCTGGGTG CTGTGTGGCT GGCACAGTGC AATGAAATCA AAGACAAGGA GCTGCCACAG 
TACCTGGCCT TGACTCCGAG GAAGAAGAGA CCCTATGACA ACTGGCTGGA GGGTGTACCA 
CGCTTTCTGG CTGGATTAGT TTTCCAGCCT CGAGCCCACT GCCTGGGAGC TCTGGTGGAG 
CCTGCAGTGG CTGCAGTGGC GGATAGGAAA CAGAAGGTTC TTACCAGGTA CCTGAAGCGC 
CTGAAGCTGG GGACACTCCG GGCAGGGAGG CTGCTGGAGC TGCTCCACTG TGCCCACGAG 
ACACAGCAAC CTGGGATATG GGAGCATGTT GCACACCAGC TCCCTGGCCA CCTCTCCTTC 
CTGGGCACCC GGCTCACACC CCCAGATGTG TATGTGCTGG GCAGGGCCTT GGAGACAGCC 
AGCCAGGACT TCTCCTTGGA CCTTCGTCAG ACTGGCGTTG AGCCTTCTGG ACTGGGAAAC 
CTCGTGGGAC TCAGCTGTGT CACCAGTTTC AGGGCCTCCT TGAGTGATAC AATGGCATTA 
TGGGAGTCCC TTCAGCAGCA GGGAGAAGCC CAGCTACTCC AGGCGGCAGA GGAGAAGTTC 
ACCATTGAGC CATTTAAAGC CAAATCCCCA AAGGATGTGG AAGACCTGGA TCGTCTCGTG 
CAGACCCAGA GGCTGAGAAA CCCCTCAGAA GATGCAGCCA AGGATCTTCC TGCCATCCGG 
GACCTTAAGA AGCTAGAGTT TGCGTTGGGC CCCATCTTGG GCCCCCAGGC TTTCCCCACA 
CTGGCAAAGA TCCTTCCAGC CTTCTCTTCT CTGCAACACC TGGACCTGGA CTCACTTAGT 
GAGAACAAGA TCGGAGACAA GGGTGTGTCG AAGCTCTCAG CCACCTTCCC TCAGCTGAAG 
GCCCTGGAGA CGCTCAAATC ATGCACTCTC CCATTCAGCC ACTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Gene Symbol	Ciita
Entrez Gene ID	12265
Full Name	class II transactivator
Synonyms	C2ta,EG669998,Gm9475,Mhc2ta
General protein information	Preferred Names class II transactivator Names MHC class II transactivator
Gene Type	protein-coding
Organism	Mus musculus(house mouse)
Genome	Chromosome: 16 Map Location: 16\|16 A1
Summary	This gene encodes a member of the NOD-like receptor protein family. This protein acts as a transcriptional coactivator and component of the enhanceosome complex to stimulate transcription of MHC class II genes in the adaptive immune response. This protein may also regulate the transcription of MHC class I genes. Mutations in the human gene have been linked to a rare immunodeficiency, bare lymphocyte syndrome, and homozygous knockout mice exhibit many features of this disease. Alternative splicing results in multiple transcript variants encoding different isoforms. [provided by RefSeq, Oct 2014].

Bos taurus (cattle)	CIITA	XP_002698008.2
	CIITA	XP_001103518.2
Canis lupus familiaris (dog)	CIITA	XP_005621604.1
Gallus gallus (chicken)	LOC416633	XP_004945372.1
Xenopus tropicalis (tropical clawed frog)	ciita	XP_004918329.1
Pan troglodytes (chimpanzee)	CIITA	XP_510813.2
Rattus norvegicus (Norway rat)	Ciita	NP_445981.2
Homo sapiens (human)	CIITA	NP_001273331.1
Mus musculus (house mouse)	Ciita	NP_001230689.1
Danio rerio (zebrafish)	ciita	XP_005163972.1

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Ciita cDNA ORF clone, Mus musculus(house mouse)

Gene

Clones

gRNAs

Related articles in PubMed

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