Gene Symbol | PPM1A |
Entrez Gene ID | 281994 |
Full Name | protein phosphatase, Mg2+/Mn2+ dependent 1A |
Synonyms | PP2C-alpha |
Gene Type | protein-coding |
Organism | Bos taurus(cattle) |
ORF » Species Summary » Bos taurus » PPM1A cDNA ORF clone
Gene Symbol | PPM1A |
Entrez Gene ID | 281994 |
Full Name | protein phosphatase, Mg2+/Mn2+ dependent 1A |
Synonyms | PP2C-alpha |
Gene Type | protein-coding |
Organism | Bos taurus(cattle) |
mRNA | Protein | Name |
---|---|---|
XM_015473222.1 | XP_015328708.1 | protein phosphatase 1A isoform X1 |
NM_001302772.1 | NP_001289701.1 | protein phosphatase 1A isoform 1 |
XM_024997274.1 | XP_024853042.1 | protein phosphatase 1A isoform X1 |
NM_174429.3 | NP_776854.1 | protein phosphatase 1A isoform 2 |
XM_024997273.1 | XP_024853041.1 | protein phosphatase 1A isoform X1 |
XM_015473222.2 | XP_015328708.1 | protein phosphatase 1A isoform X1 |
Pan troglodytes (chimpanzee) | PPM1A | XP_001167412.2 |
Canis lupus familiaris (dog) | PPM1A | XP_537467.3 |
Danio rerio (zebrafish) | ppm1aa | NP_571504.1 |
Homo sapiens (human) | PPM1A | NP_808821.2 |
Gallus gallus (chicken) | PPM1A | XP_421422.1 |
Xenopus tropicalis (tropical clawed frog) | ppm1a | NP_001016158.2 |
Rattus norvegicus (Norway rat) | Ppm1a | NP_058734.1 |
PPM1A | XP_001096358.2 | |
Bos taurus (cattle) | PPM1A | NP_776854.1 |
Mus musculus (house mouse) | Ppm1a | NP_032936.1 |
A whole-genome assembly of the domestic cow, Bos taurus.
Zimin AV, Delcher AL, Florea L, Kelley DR, Schatz MC, Puiu D, Hanrahan F, Pertea G, Van Tassell CP, Sonstegard TS, Mar?ais G, Roberts M, Subramanian P, Yorke JA, Salzberg SL
Genome biology10(4)R42(2009)
Protein phosphatase type-2C isozymes present in vertebrate retinae: purification, characterization, and localization in photoreceptors.
Klumpp S, Selke D, Fischer D, Baumann A, M?ller F, Thanos S
Journal of neuroscience research51(3)328-38(1998 Feb)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following PPM1A gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the PPM1A cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OBa43611 | |
Clone ID Related Accession (Same CDS sequence) | XM_015473222.1 , XM_024997274.1 , NM_174429.3 , XM_024997273.1 , XM_015473222.2 | |
Accession Version | NM_174429.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1149bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-22 | |
Organism | Bos taurus(cattle) | |
Product | protein phosphatase 1A isoform 2 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AJ005457.1. On Nov 15, 2014 this sequence version replaced NM_174429.2. Transcript Variant: This variant (2) lacks an alternate exon in the 5' UTR, lacks a portion of the 5' coding region, and initiates translation at a downstream start codon, compared to variant 1. The encoded isoform (2) has a shorter N-terminus, compared to isoform 1. ##Evidence-Data-START## Transcript exon combination :: AJ005457.1, DN520062.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN03145412, SAMN03145413 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGGAGCAT TTTTAGACAA ACCAAAGATG GAAAAACATA ATGCCCAGGG GCAGGGTAAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_776854.1 |
CDS | 21..1169 |
Translation |
Target ORF information:
Target ORF information:
|
NM_174429.3 |
1 | ATGGGAGCAT TTTTAGACAA ACCAAAGATG GAAAAACATA ATGCCCAGGG GCAGGGTAAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa45307 | |
Clone ID Related Accession (Same CDS sequence) | NM_001302772.1 | |
Accession Version | NM_001302772.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1365bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-22 | |
Organism | Bos taurus(cattle) | |
Product | protein phosphatase 1A isoform 1 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BC112558.1 and AJ005457.1. Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1). ##Evidence-Data-START## Transcript exon combination :: BC112558.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN03145479, SAMN03145485 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGTATTTCT TCAGCAGAAA GTGGGTAGCA GAAACTGTAA TTTCTACTAG GCTCAGGAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001289701.1 |
CDS | 15..1379 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001302772.1 |
1 | ATGTATTTCT TCAGCAGAAA GTGGGTAGCA GAAACTGTAA TTTCTACTAG GCTCAGGAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa43611 | |
Clone ID Related Accession (Same CDS sequence) | XM_015473222.1 , XM_024997274.1 , NM_174429.3 , XM_024997273.1 , XM_015473222.2 | |
Accession Version | XM_015473222.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1149bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-01-25 | |
Organism | Bos taurus(cattle) | |
Product | protein phosphatase 1A isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003104283.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bos taurus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGAGCAT TTTTAGACAA ACCAAAGATG GAAAAACATA ATGCCCAGGG GCAGGGTAAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_015328708.1 |
CDS | 136..1284 |
Translation |
Target ORF information:
Target ORF information:
|
XM_015473222.1 |
1 | ATGGGAGCAT TTTTAGACAA ACCAAAGATG GAAAAACATA ATGCCCAGGG GCAGGGTAAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa43611 | |
Clone ID Related Accession (Same CDS sequence) | XM_015473222.1 , XM_024997274.1 , NM_174429.3 , XM_024997273.1 , XM_015473222.2 | |
Accession Version | XM_024997274.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1149bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | protein phosphatase 1A isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037337.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGAGCAT TTTTAGACAA ACCAAAGATG GAAAAACATA ATGCCCAGGG GCAGGGTAAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_024853042.1 |
CDS | 679..1827 |
Translation |
Target ORF information:
Target ORF information:
|
XM_024997274.1 |
1 | ATGGGAGCAT TTTTAGACAA ACCAAAGATG GAAAAACATA ATGCCCAGGG GCAGGGTAAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa43611 | |
Clone ID Related Accession (Same CDS sequence) | XM_015473222.1 , XM_024997274.1 , NM_174429.3 , XM_024997273.1 , XM_015473222.2 | |
Accession Version | XM_024997273.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1149bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | protein phosphatase 1A isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037337.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGAGCAT TTTTAGACAA ACCAAAGATG GAAAAACATA ATGCCCAGGG GCAGGGTAAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_024853041.1 |
CDS | 474..1622 |
Translation |
Target ORF information:
Target ORF information:
|
XM_024997273.1 |
1 | ATGGGAGCAT TTTTAGACAA ACCAAAGATG GAAAAACATA ATGCCCAGGG GCAGGGTAAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa43611 | |
Clone ID Related Accession (Same CDS sequence) | XM_015473222.1 , XM_024997274.1 , NM_174429.3 , XM_024997273.1 , XM_015473222.2 | |
Accession Version | XM_015473222.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1149bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | protein phosphatase 1A isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037337.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On May 7, 2018 this sequence version replaced XM_015473222.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGAGCAT TTTTAGACAA ACCAAAGATG GAAAAACATA ATGCCCAGGG GCAGGGTAAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_015328708.1 |
CDS | 547..1695 |
Translation |
Target ORF information:
Target ORF information:
|
XM_015473222.2 |
1 | ATGGGAGCAT TTTTAGACAA ACCAAAGATG GAAAAACATA ATGCCCAGGG GCAGGGTAAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
A whole-genome assembly of the domestic cow, Bos taurus. |
Protein phosphatase type-2C isozymes present in vertebrate retinae: purification, characterization, and localization in photoreceptors. |