Gene Symbol | DDB2 |
Entrez Gene ID | 835990 |
Full Name | damaged DNA binding 2 |
Synonyms | MZN1.20,MZN1_20,damaged DNA binding 2 |
Gene Type | protein-coding |
Organism | Arabidopsis thaliana(thale cress) |
ORF » Species Summary » Arabidopsis thaliana » DDB2 cDNA ORF clone
Gene Symbol | DDB2 |
Entrez Gene ID | 835990 |
Full Name | damaged DNA binding 2 |
Synonyms | MZN1.20,MZN1_20,damaged DNA binding 2 |
Gene Type | protein-coding |
Organism | Arabidopsis thaliana(thale cress) |
mRNA | Protein | Name |
---|---|---|
NM_125263.5 | NP_200684.2 | damaged DNA binding 2 |
NM_001345321.1 | NP_001332069.1 | damaged DNA binding 2 |
Gallus gallus (chicken) | DDB2 | NP_001034390.1 |
Arabidopsis thaliana (thale cress) | DDB2 | NP_200684.2 |
Xenopus tropicalis (tropical clawed frog) | ddb2 | NP_001008203.1 |
Mus musculus (house mouse) | Ddb2 | NP_082395.2 |
Rattus norvegicus (Norway rat) | Ddb2 | NP_001258275.1 |
Homo sapiens (human) | DDB2 | NP_000098.1 |
Pan troglodytes (chimpanzee) | DDB2 | XP_001167874.2 |
DDB2 | XP_001109935.1 | |
Bos taurus (cattle) | DDB2 | NP_001069256.1 |
Oryza sativa (rice) | Os01g0141700 | NP_001041985.1 |
Canis lupus familiaris (dog) | DDB2 | XP_540746.3 |
Danio rerio (zebrafish) | ddb2 | NP_001076530.1 |
Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.
Tabata S, Kaneko T, Nakamura Y, Kotani H, Kato T, Asamizu E, Miyajima N, Sasamoto S, Kimura T, Hosouchi T, Kawashima K, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Naruo K, Okumura S, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Sato S, de la Bastide M, Huang E, Spiegel L, Gnoj L, O'Shaughnessy A, Preston R, Habermann K, Murray J, Johnson D, Rohlfing T, Nelson J, Stoneking T, Pepin K, Spieth J, Sekhon M, Armstrong J, Becker M, Belter E, Cordum H, Cordes M, Courtney L, Courtney W, Dante M, Du H, Edwards J, Fryman J, Haakensen B, Lamar E, Latreille P, Leonard S, Meyer R, Mulvaney E, Ozersky P, Riley A, Strowmatt C, Wagner-McPherson C, Wollam A, Yoakum M, Bell M, Dedhia N, Parnell L, Shah R, Rodriguez M, See LH, Vil D, Baker J, Kirchoff K, Toth K, King L, Bahret A, Miller B, Marra M, Martienssen R, McCombie WR, Wilson RK, Murphy G, Bancroft I, Volckaert G, Wambutt R, D?sterh?ft A, Stiekema W, Pohl T, Entian KD, Terryn N, Hartley N, Bent E, Johnson S, Langham SA, McCullagh B, Robben J, Grymonprez B, Zimmermann W, Ramsperger U, Wedler H, Balke K, Wedler E, Peters S, van Staveren M, Dirkse W, Mooijman P, Lankhorst RK, Weitzenegger T, Bothe G, Rose M, Hauf J, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Villarroel R, Gielen J, Ardiles W, Bents O, Lemcke K, Kolesov G, Mayer K, Rudd S, Schoof H, Schueller C, Zaccaria P, Mewes HW, Bevan M, Fransz P, , ,
Nature408(6814)823-6(2000 Dec)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
UVH6, DDB1A, and DDB2 all contribute to UV tolerance, heat tolerance and floral patterning.
Title: Interactions between Arabidopsis DNA repair genes UVH6, DDB1A, and DDB2 during abiotic stress tolerance and floral development.
Altogether, these data suggest that DET1, CUL4 and DDB2 cooperate during the excision repair process.
Title: The conserved factor DE-ETIOLATED 1 cooperates with CUL4-DDB1DDB2 to maintain genome integrity upon UV stress.
DDB2 but not ATCSA-1 expression is upregulated upon UV treatment.
Title: The DDB1a interacting proteins ATCSA-1 and DDB2 are critical factors for UV-B tolerance and genomic integrity in Arabidopsis thaliana.
Results show that DDB1A is required for UV regulation of DDB1B and DDB2 mRNA levels while DDB1A is sufficient to increase Arabidopsis UV tolerance.
Title: Overexpression of Arabidopsis damaged DNA binding protein 1A (DDB1A) enhances UV tolerance.
CUL4-DDB1A-DDB2 complex is involved in global genome repair of UV-induced DNA lesions.
Title: Regulation and role of Arabidopsis CUL4-DDB1A-DDB2 in maintaining genome integrity upon UV stress.
The following DDB2 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the DDB2 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OAb21830 | |
Clone ID Related Accession (Same CDS sequence) | NM_125263.5 | |
Accession Version | NM_125263.5 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1674bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | damaged DNA binding 2 | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003076). On Sep 12, 2016 this sequence version replaced NM_125263.4. |
1 | ATGAGTTCAA CGAGGAGCAG AAGAAAAAGG GACCCAGAAA TCGTCATCGC TAGAGATACA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_200684.2 |
CDS | 102..1775 |
Translation |
Target ORF information:
Target ORF information:
|
NM_125263.5 |
1 | ATGAGTTCAA CGAGGAGCAG AAGAAAAAGG GACCCAGAAA TCGTCATCGC TAGAGATACA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAb42029 | |
Clone ID Related Accession (Same CDS sequence) | NM_001345321.1 | |
Accession Version | NM_001345321.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1380bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | damaged DNA binding 2 | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003076). |
1 | ATGAAGCCTT GCTTCTTGTG TAAAATGCCT GGCCACACCA CAATGTCCTG TCCTCATAGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001332069.1 |
CDS | 665..2044 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001345321.1 |
1 | ATGAAGCCTT GCTTCTTGTG TAAAATGCCT GGCCACACCA CAATGTCCTG TCCTCATAGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. |