Gene Symbol | CBP20 |
Entrez Gene ID | 834443 |
Full Name | CAP-binding protein 20 |
Synonyms | ATCBP20,CAP-binding protein 20,MLN1.12,MLN1_12 |
Gene Type | protein-coding |
Organism | Arabidopsis thaliana(thale cress) |
ORF » Species Summary » Arabidopsis thaliana » CBP20 cDNA ORF clone
Gene Symbol | CBP20 |
Entrez Gene ID | 834443 |
Full Name | CAP-binding protein 20 |
Synonyms | ATCBP20,CAP-binding protein 20,MLN1.12,MLN1_12 |
Gene Type | protein-coding |
Organism | Arabidopsis thaliana(thale cress) |
mRNA | Protein | Name |
---|---|---|
NM_001085236.2 | NP_001078705.1 | CAP-binding protein 20 |
NM_123787.4 | NP_199233.1 | CAP-binding protein 20 |
Xenopus tropicalis (tropical clawed frog) | ncbp2 | NP_001006879.1 |
Pan troglodytes (chimpanzee) | NCBP2 | XP_516977.2 |
Rattus norvegicus (Norway rat) | LOC100911481 | XP_003751123.2 |
Homo sapiens (human) | NCBP2 | NP_031388.2 |
Bos taurus (cattle) | NCBP2 | NP_001029568.1 |
Mus musculus (house mouse) | Ncbp2 | NP_080830.1 |
Danio rerio (zebrafish) | ncbp2 | NP_775356.1 |
NCBP2 | XP_002803120.1 | |
Rattus norvegicus (Norway rat) | Pigz | NP_001102995.1 |
Gallus gallus (chicken) | NCBP2 | NP_001264384.1 |
Oryza sativa (rice) | Os02g0612300 | NP_001047412.1 |
Canis lupus familiaris (dog) | NCBP2 | XP_005639661.1 |
Arabidopsis thaliana (thale cress) | CBP20 | NP_001078705.1 |
Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.
Tabata S, Kaneko T, Nakamura Y, Kotani H, Kato T, Asamizu E, Miyajima N, Sasamoto S, Kimura T, Hosouchi T, Kawashima K, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Naruo K, Okumura S, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Sato S, de la Bastide M, Huang E, Spiegel L, Gnoj L, O'Shaughnessy A, Preston R, Habermann K, Murray J, Johnson D, Rohlfing T, Nelson J, Stoneking T, Pepin K, Spieth J, Sekhon M, Armstrong J, Becker M, Belter E, Cordum H, Cordes M, Courtney L, Courtney W, Dante M, Du H, Edwards J, Fryman J, Haakensen B, Lamar E, Latreille P, Leonard S, Meyer R, Mulvaney E, Ozersky P, Riley A, Strowmatt C, Wagner-McPherson C, Wollam A, Yoakum M, Bell M, Dedhia N, Parnell L, Shah R, Rodriguez M, See LH, Vil D, Baker J, Kirchoff K, Toth K, King L, Bahret A, Miller B, Marra M, Martienssen R, McCombie WR, Wilson RK, Murphy G, Bancroft I, Volckaert G, Wambutt R, D?sterh?ft A, Stiekema W, Pohl T, Entian KD, Terryn N, Hartley N, Bent E, Johnson S, Langham SA, McCullagh B, Robben J, Grymonprez B, Zimmermann W, Ramsperger U, Wedler H, Balke K, Wedler E, Peters S, van Staveren M, Dirkse W, Mooijman P, Lankhorst RK, Weitzenegger T, Bothe G, Rose M, Hauf J, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Villarroel R, Gielen J, Ardiles W, Bents O, Lemcke K, Kolesov G, Mayer K, Rudd S, Schoof H, Schueller C, Zaccaria P, Mewes HW, Bevan M, Fransz P, , ,
Nature408(6814)823-6(2000 Dec)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
we proposed that ethylene regulated phosphorylation of CBP20 is involved in the root growth and one pathway is through the regulation of miR319b and its target MYB33 in roots
Title: Phosphorylation of CBP20 Links MicroRNA to Root Growth in the Ethylene Response.
Data suggest that CBP20 and CBP80 (ABH1) have synergistic roles during the salt stress response.
Title: Quantitative proteomics analysis reveals that the nuclear cap-binding complex proteins arabidopsis CBP20 and CBP80 modulate the salt stress response.
SERRATE, CAP BINDING PROTEIN20 (CBP20), and CBP80 are regulators of lincRNA expression and biogenesis. RT-PCR experiments confirmed these three proteins are also needed for splicing of a small group of intron-containing lincRNAs.
Title: Genome-wide analysis uncovers regulation of long intergenic noncoding RNAs in Arabidopsis.
Some hitherto undescribed changes were found in the tissue structure and epidermal morphology of cbp20 mutant
Title: New phenotypes of the drought-tolerant cbp20 Arabidopsis thaliana mutant have changed epidermal morphology.
The cbp80(abh1) and cbp20/80 mutants had many more changes in alternative splicing in common than did cbp20 and cbp20/80 suggesting that CBP80 plays a more significant role in alternative splicing than CBP20.
Title: Involvement of the nuclear cap-binding protein complex in alternative splicing in Arabidopsis thaliana.
The following CBP20 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the CBP20 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OAb20504 | |
Clone ID Related Accession (Same CDS sequence) | NM_001085236.2 , NM_123787.4 | |
Accession Version | NM_001085236.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 774bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | CAP-binding protein 20 | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003076). On Sep 12, 2016 this sequence version replaced NM_001085236.1. |
1 | ATGGCTTCTT TGTTCAAGGA GCAAGCAAAG CTATCAGCTT ATCGTGATAG AAGATTTTCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001078705.1 |
CDS | 234..1007 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001085236.2 |
1 | ATGGCTTCTT TGTTCAAGGA GCAAGCAAAG CTATCAGCTT ATCGTGATAG AAGATTTTCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAb20504 | |
Clone ID Related Accession (Same CDS sequence) | NM_001085236.2 , NM_123787.4 | |
Accession Version | NM_123787.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 774bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | CAP-binding protein 20 | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003076). On Sep 12, 2016 this sequence version replaced NM_123787.3. |
1 | ATGGCTTCTT TGTTCAAGGA GCAAGCAAAG CTATCAGCTT ATCGTGATAG AAGATTTTCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_199233.1 |
CDS | 232..1005 |
Translation |
Target ORF information:
Target ORF information:
|
NM_123787.4 |
1 | ATGGCTTCTT TGTTCAAGGA GCAAGCAAAG CTATCAGCTT ATCGTGATAG AAGATTTTCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. |