Gene Symbol | AT5G08450 |
Entrez Gene ID | 830744 |
Full Name | zinc finger CCCH domain protein |
Synonyms | F8L15.180,F8L15_180,HDC1,Histone Deacetylation Complex 1,RXT3-like |
Gene Type | protein-coding |
Organism | Arabidopsis thaliana(thale cress) |
ORF » Species Summary » Arabidopsis thaliana » AT5G08450 cDNA ORF clone
Gene Symbol | AT5G08450 |
Entrez Gene ID | 830744 |
Full Name | zinc finger CCCH domain protein |
Synonyms | F8L15.180,F8L15_180,HDC1,Histone Deacetylation Complex 1,RXT3-like |
Gene Type | protein-coding |
Organism | Arabidopsis thaliana(thale cress) |
mRNA | Protein | Name |
---|---|---|
NM_120930.5 | NP_196462.2 | zinc finger CCCH domain protein |
NM_180702.3 | NP_851033.1 | zinc finger CCCH domain protein |
NM_001036780.1 | NP_001031857.1 | zinc finger CCCH domain protein |
Oryza sativa (rice) | Os07g0477500 | NP_001059629.1 |
Arabidopsis thaliana (thale cress) | AT5G08450 | NP_851033.1 |
Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.
Tabata S, Kaneko T, Nakamura Y, Kotani H, Kato T, Asamizu E, Miyajima N, Sasamoto S, Kimura T, Hosouchi T, Kawashima K, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Naruo K, Okumura S, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Sato S, de la Bastide M, Huang E, Spiegel L, Gnoj L, O'Shaughnessy A, Preston R, Habermann K, Murray J, Johnson D, Rohlfing T, Nelson J, Stoneking T, Pepin K, Spieth J, Sekhon M, Armstrong J, Becker M, Belter E, Cordum H, Cordes M, Courtney L, Courtney W, Dante M, Du H, Edwards J, Fryman J, Haakensen B, Lamar E, Latreille P, Leonard S, Meyer R, Mulvaney E, Ozersky P, Riley A, Strowmatt C, Wagner-McPherson C, Wollam A, Yoakum M, Bell M, Dedhia N, Parnell L, Shah R, Rodriguez M, See LH, Vil D, Baker J, Kirchoff K, Toth K, King L, Bahret A, Miller B, Marra M, Martienssen R, McCombie WR, Wilson RK, Murphy G, Bancroft I, Volckaert G, Wambutt R, D?sterh?ft A, Stiekema W, Pohl T, Entian KD, Terryn N, Hartley N, Bent E, Johnson S, Langham SA, McCullagh B, Robben J, Grymonprez B, Zimmermann W, Ramsperger U, Wedler H, Balke K, Wedler E, Peters S, van Staveren M, Dirkse W, Mooijman P, Lankhorst RK, Weitzenegger T, Bothe G, Rose M, Hauf J, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Villarroel R, Gielen J, Ardiles W, Bents O, Lemcke K, Kolesov G, Mayer K, Rudd S, Schoof H, Schueller C, Zaccaria P, Mewes HW, Bevan M, Fransz P, , ,
Nature408(6814)823-6(2000 Dec)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
HDC1 is a ubiquitously expressed nuclear protein that interacts with at least two deacetylases (HDA6 and HDA19), promotes histone deacetylation, and attenuates derepression of genes under water stress.
Title: Histone deacetylase complex1 expression level titrates plant growth and abscisic acid sensitivity in Arabidopsis.
The following AT5G08450 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the AT5G08450 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OAb17912 | |
Clone ID Related Accession (Same CDS sequence) | NM_120930.5 , NM_180702.3 , NM_001036780.1 | |
Accession Version | NM_120930.5 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2757bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | zinc finger CCCH domain protein | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003076). On Sep 12, 2016 this sequence version replaced NM_120930.4. |
1 | ATGAGTGGTG TTCCAAAGAG ATCTCACGAA GAGGGTGTTA CTCATCCATC TTCTTCTTCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_196462.2 |
CDS | 256..3012 |
Translation |
Target ORF information:
Target ORF information:
|
NM_120930.5 |
1 | ATGAGTGGTG TTCCAAAGAG ATCTCACGAA GAGGGTGTTA CTCATCCATC TTCTTCTTCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAb17912 | |
Clone ID Related Accession (Same CDS sequence) | NM_120930.5 , NM_180702.3 , NM_001036780.1 | |
Accession Version | NM_180702.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2757bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | zinc finger CCCH domain protein | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003076). On Sep 12, 2016 this sequence version replaced NM_180702.2. |
1 | ATGAGTGGTG TTCCAAAGAG ATCTCACGAA GAGGGTGTTA CTCATCCATC TTCTTCTTCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_851033.1 |
CDS | 219..2975 |
Translation |
Target ORF information:
Target ORF information:
|
NM_180702.3 |
1 | ATGAGTGGTG TTCCAAAGAG ATCTCACGAA GAGGGTGTTA CTCATCCATC TTCTTCTTCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAb17912 | |
Clone ID Related Accession (Same CDS sequence) | NM_120930.5 , NM_180702.3 , NM_001036780.1 | |
Accession Version | NM_001036780.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2757bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | zinc finger CCCH domain protein | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003076). |
1 | ATGAGTGGTG TTCCAAAGAG ATCTCACGAA GAGGGTGTTA CTCATCCATC TTCTTCTTCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001031857.1 |
CDS | 178..2934 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001036780.1 |
1 | ATGAGTGGTG TTCCAAAGAG ATCTCACGAA GAGGGTGTTA CTCATCCATC TTCTTCTTCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. |