ARA6 cDNA ORF clone, Arabidopsis thaliana(thale cress)

Gene
Clones
gRNAs

Summary

Gene Symbol	ARA6
Entrez Gene ID	824649
Full Name	Ras-related small GTP-binding family protein
Synonyms	ARA-6,ATRAB5C,ATRABF1,AtARA6,RABF1
Gene Type	protein-coding
Organism	Arabidopsis thaliana(thale cress)

mRNA and Protein(s)

mRNA	Protein	Name
NM_115341.3	NP_567008.1	Ras-related small GTP-binding family protein
NM_001339701.1	NP_001327724.1	Ras-related small GTP-binding family protein
NM_001084818.1	NP_001078287.1	Ras-related small GTP-binding family protein

Pathways from BioSystems

Homologies

Eremothecium gossypii	AGOS_AAL176C	NP_982366.1
Danio rerio (zebrafish)	rab5b	NP_998050.1
Schizosaccharomyces pombe (fission yeast)	ypt5	NP_593907.1
Arabidopsis thaliana (thale cress)	ARA6	NP_567008.1
Xenopus tropicalis (tropical clawed frog)	mras	NP_001184079.1
Magnaporthe oryzae (rice blast fungus)	MGG_01185	XP_003714070.1
Neurospora crassa	NCU00895	XP_964811.1
Oryza sativa (rice)	Os10g0441800	NP_001064692.1
Saccharomyces cerevisiae (baker's yeast)	YPT52	NP_012939.1
Kluyveromyces lactis	KLLA0D02376g	XP_453174.1
Oryza sativa (rice)	Os03g0151900	NP_001048988.1

Gene Ontology
Bibliography

Related articles in PubMed

Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.
Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl?cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell LA, Mache R, Puigdom?nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu?tier F, Sch?fer M, M?ller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L?hnert TH, Nordsiek G, Reichelt J, Scharfe M, Sch?n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw?lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse AC, Alcaraz JP, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes HW, Mayer KF, Kaul S, Town CD, Koo HL, Tallon LJ, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii CY, Shea TP, Creasy TH, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill JE, Feldblyum TV, Preuss D, Lin X, Nierman WC, Salzberg SL, White O, Venter JC, Fraser CM, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,
Nature408(6814)820-2(2000 Dec)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

ARA6 is localized to the specialized membrane that surrounds the haustorium, the extrahaustorial membrane, formed by the A. thaliana-adapted powdery mildew fungus Golovinomyces orontii.
Title: Modulation of Plant RAB GTPase-Mediated Membrane Trafficking Pathway at the Interface Between Plants and Obligate Biotrophic Pathogens.

This study investigated the function of the C-terminal region (CTR) by generating truncated versions of VPS9a and found that it was specifically responsible for ARA6 regulation. The CTR was required for oligomerization and correct localization of VPS9a.
Title: Functional analyses of the plant-specific C-terminal region of VPS9a: the activating factor for RAB5 in Arabidopsis thaliana.

ARA6 is responsible for starch and sugar homeostasis, most probably through the function of QQS.
Title: The Plant-Specific RAB5 GTPase ARA6 is Required for Starch and Sugar Homeostasis in Arabidopsis thaliana.

Data indicate that VPS9a is practically the sole guanine nucleotide exchange factor (GEF) for RAB5s (ARA6) in vegetative developmental stages.
Title: RAB5 activation is required for multiple steps in Arabidopsis thaliana root development.

Results indicate that plants possess a unique endosomal trafficking network and provide the first indication of a functional link between ARA6 and a specific SNARE complex in plants.
Title: A membrane trafficking pathway regulated by the plant-specific RAB GTPase ARA6.

The following ARA6 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the ARA6 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)
OAb13600	NM_001084818.1 Latest version!	Arabidopsis thaliana Ras-related small GTP-binding family protein (ARA6), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$69.30 $99.00
OAb13601	NM_115341.3 Latest version!	Arabidopsis thaliana Ras-related small GTP-binding family protein (ARA6), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$139.30 $199.00
OAb38351	NM_001339701.1 Latest version!	Arabidopsis thaliana Ras-related small GTP-binding family protein (ARA6), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$69.30 $99.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

ARA6 ( NM_001084818.1 ) cDNA ORF clone, Arabidopsis thaliana(thale cress) -> NP_001078287.1 Arabidopsis thaliana Ras-related small GTP-binding family protein (ARA6), mRNA.

Price & Availability↑

CloneID	OAb13600
Clone ID Related Accession (Same CDS sequence)	NM_001084818.1
Accession Version	NM_001084818.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 582bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-02-13
Organism	Arabidopsis thaliana(thale cress)
Product	Ras-related small GTP-binding family protein
Comment	Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003074).

ATGGGATGTG CTTCTTCTCT TCCAGATAGG AACTCTGGAA CTTTAAGTGG TCTTAGCAAT 
TCAGAGAATG CTGTTCCAGC TGATGCCAAA AATCTACGTG TGAAGTTAGT TCTATTAGGA 
GACTCTGGTG TTGGTAAAAG TTGTATTGTC CTTCGATTTG TACGTGGTCA GTTTGACGCT 
ACATCTAAGG TAACTGTTGG AGCCTCGTTC TTGTCCCAAA CTATAGCATT GCAAGACTCT 
ACCACAGTGA AGTTTGAAAT ATGGGATACA GCAGGACAGG AGAGGTATTC TGCTCTTGCA 
CCACTATACT ACCGTGGAGC TGGAGTTGCT GTTATTGTGT ATGATATAAC AAGCCCTGAA 
TCGTTCAAGA AAGCACAGTA TTGGGTTAAG GAACTGCAAA AGCATGGAAG CCCAGATATT 
GTTATGGCTC TGGTTGGTAA CAAAGCTGAT CTACATGAAA AAAGAGAAGT ACCTACTGAG 
GATGGAATGG AGCTTGCAGA GAAGAACGGC ATGTTCTTCA TTGAGACGTC AGCCAAGACA 
GCCGATAACA TAAATCAACT GTTTGAGTGT ACACATGTCT GA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001078287.1
CDS	186..767
Translation	MGCASSLPDRNSGTLSGLSNSENAVPADAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDATSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYSALAPLYYRGAGVAVIVYDITSPESFKKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPTEDGMELAEKNGMFFIETSAKTADNINQLFECTHV

Target ORF information:

RefSeq Version	NM_001084818.1
Organism	Arabidopsis thaliana(thale cress)
Definition	Arabidopsis thaliana Ras-related small GTP-binding family protein (ARA6), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001084818.1

ORF Insert Sequence:

ATGGGATGTG CTTCTTCTCT TCCAGATAGG AACTCTGGAA CTTTAAGTGG TCTTAGCAAT 
TCAGAGAATG CTGTTCCAGC TGATGCCAAA AATCTACGTG TGAAGTTAGT TCTATTAGGA 
GACTCTGGTG TTGGTAAAAG TTGTATTGTC CTTCGATTTG TACGTGGTCA GTTTGACGCT 
ACATCTAAGG TAACTGTTGG AGCCTCGTTC TTGTCCCAAA CTATAGCATT GCAAGACTCT 
ACCACAGTGA AGTTTGAAAT ATGGGATACA GCAGGACAGG AGAGGTATTC TGCTCTTGCA 
CCACTATACT ACCGTGGAGC TGGAGTTGCT GTTATTGTGT ATGATATAAC AAGCCCTGAA 
TCGTTCAAGA AAGCACAGTA TTGGGTTAAG GAACTGCAAA AGCATGGAAG CCCAGATATT 
GTTATGGCTC TGGTTGGTAA CAAAGCTGAT CTACATGAAA AAAGAGAAGT ACCTACTGAG 
GATGGAATGG AGCTTGCAGA GAAGAACGGC ATGTTCTTCA TTGAGACGTC AGCCAAGACA 
GCCGATAACA TAAATCAACT GTTTGAGTGT ACACATGTCT GA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

ARA6 ( NM_115341.3 ) cDNA ORF clone, Arabidopsis thaliana(thale cress) -> NP_567008.1 Arabidopsis thaliana Ras-related small GTP-binding family protein (ARA6), mRNA.

Price & Availability↑

CloneID	OAb13601
Clone ID Related Accession (Same CDS sequence)	NM_115341.3
Accession Version	NM_115341.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 609bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-02-13
Organism	Arabidopsis thaliana(thale cress)
Product	Ras-related small GTP-binding family protein
Comment	Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003074). On Sep 12, 2016 this sequence version replaced NM_115341.2.

ATGGGATGTG CTTCTTCTCT TCCAGATAGG AACTCTGGAA CTTTAAGTGG TCTTAGCAAT 
TCAGAGAATG CTGTTCCAGC TGATGCCAAA AATCTACGTG TGAAGTTAGT TCTATTAGGA 
GACTCTGGTG TTGGTAAAAG TTGTATTGTC CTTCGATTTG TACGTGGTCA GTTTGACGCT 
ACATCTAAGG TAACTGTTGG AGCCTCGTTC TTGTCCCAAA CTATAGCATT GCAAGACTCT 
ACCACAGTGA AGTTTGAAAT ATGGGATACA GCAGGACAGG AGAGGTATTC TGCTCTTGCA 
CCACTATACT ACCGTGGAGC TGGAGTTGCT GTTATTGTGT ATGATATAAC AAGCCCTGAA 
TCGTTCAAGA AAGCACAGTA TTGGGTTAAG GAACTGCAAA AGCATGGAAG CCCAGATATT 
GTTATGGCTC TGGTTGGTAA CAAAGCTGAT CTACATGAAA AAAGAGAAGT ACCTACTGAG 
GATGGAATGG AGCTTGCAGA GAAGAACGGC ATGTTCTTCA TTGAGACGTC AGCCAAGACA 
GCCGATAACA TAAATCAACT GTTTGAGGAA ATTGGCAAGA GGCTACCTCG TCCTGCTCCT 
TCGTCATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_567008.1
CDS	186..794
Translation	MGCASSLPDRNSGTLSGLSNSENAVPADAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDATSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYSALAPLYYRGAGVAVIVYDITSPESFKKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPTEDGMELAEKNGMFFIETSAKTADNINQLFEEIGKRLPRPAPSS

Target ORF information:

RefSeq Version	NM_115341.3
Organism	Arabidopsis thaliana(thale cress)
Definition	Arabidopsis thaliana Ras-related small GTP-binding family protein (ARA6), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_115341.3

ORF Insert Sequence:

ATGGGATGTG CTTCTTCTCT TCCAGATAGG AACTCTGGAA CTTTAAGTGG TCTTAGCAAT 
TCAGAGAATG CTGTTCCAGC TGATGCCAAA AATCTACGTG TGAAGTTAGT TCTATTAGGA 
GACTCTGGTG TTGGTAAAAG TTGTATTGTC CTTCGATTTG TACGTGGTCA GTTTGACGCT 
ACATCTAAGG TAACTGTTGG AGCCTCGTTC TTGTCCCAAA CTATAGCATT GCAAGACTCT 
ACCACAGTGA AGTTTGAAAT ATGGGATACA GCAGGACAGG AGAGGTATTC TGCTCTTGCA 
CCACTATACT ACCGTGGAGC TGGAGTTGCT GTTATTGTGT ATGATATAAC AAGCCCTGAA 
TCGTTCAAGA AAGCACAGTA TTGGGTTAAG GAACTGCAAA AGCATGGAAG CCCAGATATT 
GTTATGGCTC TGGTTGGTAA CAAAGCTGAT CTACATGAAA AAAGAGAAGT ACCTACTGAG 
GATGGAATGG AGCTTGCAGA GAAGAACGGC ATGTTCTTCA TTGAGACGTC AGCCAAGACA 
GCCGATAACA TAAATCAACT GTTTGAGGAA ATTGGCAAGA GGCTACCTCG TCCTGCTCCT 
TCGTCATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

ARA6 ( NM_001339701.1 ) cDNA ORF clone, Arabidopsis thaliana(thale cress) -> NP_001327724.1 Arabidopsis thaliana Ras-related small GTP-binding family protein (ARA6), mRNA.

Price & Availability↑

CloneID	OAb38351
Clone ID Related Accession (Same CDS sequence)	NM_001339701.1
Accession Version	NM_001339701.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 507bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-02-13
Organism	Arabidopsis thaliana(thale cress)
Product	Ras-related small GTP-binding family protein
Comment	Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003074).

ATGTTAGTTC TATTAGGAGA CTCTGGTGTT GGTAAAAGTT GTATTGTCCT TCGATTTGTA 
CGTGGTCAGT TTGACGCTAC ATCTAAGGTA ACTGTTGGAG CCTCGTTCTT GTCCCAAACT 
ATAGCATTGC AAGACTCTAC CACAGTGAAG TTTGAAATAT GGGATACAGC AGGACAGGAG 
AGGTATTCTG CTCTTGCACC ACTATACTAC CGTGGAGCTG GAGTTGCTGT TATTGTGTAT 
GATATAACAA GCCCTGAATC GTTCAAGAAA GCACAGTATT GGGTTAAGGA ACTGCAAAAG 
CATGGAAGCC CAGATATTGT TATGGCTCTG GTTGGTAACA AAGCTGATCT ACATGAAAAA 
AGAGAAGTAC CTACTGAGGA TGGAATGGAG CTTGCAGAGA AGAACGGCAT GTTCTTCATT 
GAGACGTCAG CCAAGACAGC CGATAACATA AATCAACTGT TTGAGGAAAT TGGCAAGAGG 
CTACCTCGTC CTGCTCCTTC GTCATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001327724.1
CDS	206..712
Translation	MLVLLGDSGVGKSCIVLRFVRGQFDATSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYSALAPLYYRGAGVAVIVYDITSPESFKKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPTEDGMELAEKNGMFFIETSAKTADNINQLFEEIGKRLPRPAPSS

Target ORF information:

RefSeq Version	NM_001339701.1
Organism	Arabidopsis thaliana(thale cress)
Definition	Arabidopsis thaliana Ras-related small GTP-binding family protein (ARA6), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001339701.1

ORF Insert Sequence:

ATGTTAGTTC TATTAGGAGA CTCTGGTGTT GGTAAAAGTT GTATTGTCCT TCGATTTGTA 
CGTGGTCAGT TTGACGCTAC ATCTAAGGTA ACTGTTGGAG CCTCGTTCTT GTCCCAAACT 
ATAGCATTGC AAGACTCTAC CACAGTGAAG TTTGAAATAT GGGATACAGC AGGACAGGAG 
AGGTATTCTG CTCTTGCACC ACTATACTAC CGTGGAGCTG GAGTTGCTGT TATTGTGTAT 
GATATAACAA GCCCTGAATC GTTCAAGAAA GCACAGTATT GGGTTAAGGA ACTGCAAAAG 
CATGGAAGCC CAGATATTGT TATGGCTCTG GTTGGTAACA AAGCTGATCT ACATGAAAAA 
AGAGAAGTAC CTACTGAGGA TGGAATGGAG CTTGCAGAGA AGAACGGCAT GTTCTTCATT 
GAGACGTCAG CCAAGACAGC CGATAACATA AATCAACTGT TTGAGGAAAT TGGCAAGAGG 
CTACCTCGTC CTGCTCCTTC GTCATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.
Nature408(6814)820-2(2000 Dec)
Salanoubat M,Lemcke K,Rieger M,Ansorge W,Unseld M,Fartmann B,Valle G,Bl?cker H,Perez-Alonso M,Obermaier B,Delseny M,Boutry M,Grivell LA,Mache R,Puigdom?nech P,De Simone V,Choisne N,Artiguenave F,Robert C,Brottier P,Wincker P,Cattolico L,Weissenbach J,Saurin W,Qu?tier F,Sch?fer M,M?ller-Auer S,Gabel C,Fuchs M,Benes V,Wurmbach E,Drzonek H,Erfle H,Jordan N,Bangert S,Wiedelmann R,Kranz H,Voss H,Holland R,Brandt P,Nyakatura G,Vezzi A,D'Angelo M,Pallavicini A,Toppo S,Simionati B,Conrad A,Hornischer K,Kauer G,L?hnert TH,Nordsiek G,Reichelt J,Scharfe M,Sch?n O,Bargues M,Terol J,Climent J,Navarro P,Collado C,Perez-Perez A,Ottenw?lder B,Duchemin D,Cooke R,Laudie M,Berger-Llauro C,Purnelle B,Masuy D,de Haan M,Maarse AC,Alcaraz JP,Cottet A,Casacuberta E,Monfort A,Argiriou A,flores M,Liguori R,Vitale D,Mannhaupt G,Haase D,Schoof H,Rudd S,Zaccaria P,Mewes HW,Mayer KF,Kaul S,Town CD,Koo HL,Tallon LJ,Jenkins J,Rooney T,Rizzo M,Walts A,Utterback T,Fujii CY,Shea TP,Creasy TH,Haas B,Maiti R,Wu D,Peterson J,Van Aken S,Pai G,Militscher J,Sellers P,Gill JE,Feldblyum TV,Preuss D,Lin X,Nierman WC,Salzberg SL,White O,Venter JC,Fraser CM,Kaneko T,Nakamura Y,Sato S,Kato T,Asamizu E,Sasamoto S,Kimura T,Idesawa K,Kawashima K,Kishida Y,Kiyokawa C,Kohara M,Matsumoto M,Matsuno A,Muraki A,Nakayama S,Nakazaki N,Shinpo S,Takeuchi C,Wada T,Watanabe A,Yamada M,Yasuda M,Tabata S,,,

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ARA6 cDNA ORF clone, Arabidopsis thaliana(thale cress)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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