Gene Symbol | ATX1 |
Entrez Gene ID | 817721 |
Full Name | homologue of trithorax |
Synonyms | SDG27,SET DOMAIN PROTEIN 27,T9H9.17,T9H9_17,homologue of trithorax |
Gene Type | protein-coding |
Organism | Arabidopsis thaliana(thale cress) |
ORF » Species Summary » Arabidopsis thaliana » ATX1 cDNA ORF clone
Gene Symbol | ATX1 |
Entrez Gene ID | 817721 |
Full Name | homologue of trithorax |
Synonyms | SDG27,SET DOMAIN PROTEIN 27,T9H9.17,T9H9_17,homologue of trithorax |
Gene Type | protein-coding |
Organism | Arabidopsis thaliana(thale cress) |
mRNA | Protein | Name |
---|---|---|
NM_179839.3 | NP_850170.1 | homologue of trithorax |
Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.
Lin X, Kaul S, Rounsley S, Shea TP, Benito MI, Town CD, Fujii CY, Mason T, Bowman CL, Barnstead M, Feldblyum TV, Buell CR, Ketchum KA, Lee J, Ronning CM, Koo HL, Moffat KS, Cronin LA, Shen M, Pai G, Van Aken S, Umayam L, Tallon LJ, Gill JE, Adams MD, Carrera AJ, Creasy TH, Goodman HM, Somerville CR, Copenhaver GP, Preuss D, Nierman WC, White O, Eisen JA, Salzberg SL, Fraser CM, Venter JC
Nature402(6763)761-8(1999 Dec)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
Our study provided genetic evidence for the first time that, copper ions necessary for ethylene receptor biogenesis and signaling are transported from ATX1 to RAN1.
Title: Triplin, a small molecule, reveals copper ion transport in ethylene signaling from ATX1 to RAN1.
ATX1 is involved in the timing of root development, stem cell niche maintenance, and cell patterning during primary and lateral root development.
Title: Arabidopsis homolog of trithorax1 (ATX1) is required for cell production, patterning, and morphogenesis in root development.
review of role in gene activation
Title: ATX1/AtCOMPASS and the H3K4me3 marks: how do they activate Arabidopsis genes?
overexpression of ATX1 resulted in hypersensitivity to severe Cu deficiency... However, overexpression of mutated ATX1, replacing the Cu-binding motif MXCXXC with MXGXXG, abolished the hypersensitivity...
Title: Overexpression of Arabidopsis ATX1 retards plant growth under severe copper deficiency.
We demonstrate that ATX1 and AtCOMPASS-like have distinct effects on PIC (transcription preinitiation complex )formation and the transition to transcription elongation. ATX1 and AtCOMPASS-like are required for efficient PIC formation.
Title: ATX1-generated H3K4me3 is required for efficient elongation of transcription, not initiation, at ATX1-regulated genes.
The following ATX1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the ATX1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OAb08467 | |
Clone ID Related Accession (Same CDS sequence) | NM_179839.3 | |
Accession Version | NM_179839.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3189bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | homologue of trithorax | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003071). On Sep 12, 2016 this sequence version replaced NM_179839.2. |
1 | ATGGCGTGTT TTTCTAACGA AACCCAGATC GAAATTGATG TCCACGATCT AGTGGAAGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_850170.1 |
CDS | 251..3439 |
Translation |
Target ORF information:
Target ORF information:
|
NM_179839.3 |
1 | ATGGCGTGTT TTTCTAACGA AACCCAGATC GAAATTGATG TCCACGATCT AGTGGAAGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. |