Gene Symbol | NUP50 |
Entrez Gene ID | 461955 |
Full Name | nucleoporin 50 |
Gene Type | protein-coding |
Organism | Pan troglodytes(chimpanzee) |
ORF » Species Summary » Pan troglodytes » NUP50 cDNA ORF clone
Gene Symbol | NUP50 |
Entrez Gene ID | 461955 |
Full Name | nucleoporin 50 |
Gene Type | protein-coding |
Organism | Pan troglodytes(chimpanzee) |
mRNA | Protein | Name |
---|---|---|
XM_009438581.3 | XP_009436856.1 | nuclear pore complex protein Nup50 isoform X1 |
XM_016938796.2 | XP_016794285.1 | nuclear pore complex protein Nup50 isoform X1 |
XM_009438581.2 | XP_009436856.1 | nuclear pore complex protein Nup50 isoform X1 |
XM_016938796.1 | XP_016794285.1 | nuclear pore complex protein Nup50 isoform X1 |
XM_009438582.1 | XP_009436857.1 | nuclear pore complex protein Nup50 isoform X1 |
NM_001280258.1 | NP_001267187.1 | nuclear pore complex protein Nup50 |
Mus musculus (house mouse) | Nup50 | NP_057923.2 |
Gallus gallus (chicken) | NUP50 | NP_001012559.1 |
Danio rerio (zebrafish) | nup50 | NP_963874.2 |
Pan troglodytes (chimpanzee) | NUP50 | XP_001135300.1 |
NUP50 | XP_001109545.1 | |
Bos taurus (cattle) | NUP50 | NP_001033137.1 |
Xenopus tropicalis (tropical clawed frog) | nup50 | NP_001016628.1 |
Canis lupus familiaris (dog) | NUP50 | XP_531700.3 |
Rattus norvegicus (Norway rat) | Npap60 | NP_037123.1 |
Homo sapiens (human) | NUP50 | NP_009103.2 |
Major chimpanzee-specific structural changes in sperm development-associated genes.
Kim RN, Kim DW, Choi SH, Chae SH, Nam SH, Kim DW, Kim A, Kang A, Park KH, Lee YS, Hirai M, Suzuki Y, Sugano S, Hashimoto K, Kim DS, Park HS
Functional & integrative genomics11(3)507-17(2011 Sep)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following NUP50 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the NUP50 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OPc00744 | |
Clone ID Related Accession (Same CDS sequence) | NM_001280258.1 | |
Accession Version | NM_001280258.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1323bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-30 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | nuclear pore complex protein Nup50 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AK306048.1. On or before Jul 22, 2013 this sequence version replaced XM_001135300.3, XM_003953907.1, XM_001135073.3, XM_001134978.3. ##Evidence-Data-START## Transcript exon combination :: AK306048.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01120800, SAMN01120809 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGCCAGTG AGGAAGTCTT GAAGAATAGA GCCATAAAGA AAGCAAAGCG CAGAAATGTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001267187.1 |
CDS | 149..1471 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001280258.1 |
1 | ATGGCCAGTG AGGAAGTCTT GAAGAATAGA GCCATAAAGA AAGCAAAGCG CAGAAATGTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc39357 | |
Clone ID Related Accession (Same CDS sequence) | XM_009438581.3 , XM_016938796.2 , XM_009438581.2 , XM_016938796.1 , XM_009438582.1 | |
Accession Version | XM_009438581.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1407bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-03-19 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | nuclear pore complex protein Nup50 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_036901.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 20, 2018 this sequence version replaced XM_009438581.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Pan troglodytes Annotation Release 105 Annotation Version :: 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCCAAAA GAAATGCCGA GAAGGAACTG ACAGATAGGA ATTGGGATCA AGAAGATGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_009436856.1 |
CDS | 458..1864 |
Translation |
Target ORF information:
Target ORF information:
|
XM_009438581.3 |
1 | ATGGCCAAAA GAAATGCCGA GAAGGAACTG ACAGATAGGA ATTGGGATCA AGAAGATGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc39357 | |
Clone ID Related Accession (Same CDS sequence) | XM_009438581.3 , XM_016938796.2 , XM_009438581.2 , XM_016938796.1 , XM_009438582.1 | |
Accession Version | XM_016938796.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1407bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-03-19 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | nuclear pore complex protein Nup50 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_036901.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 20, 2018 this sequence version replaced XM_016938796.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Pan troglodytes Annotation Release 105 Annotation Version :: 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCCAAAA GAAATGCCGA GAAGGAACTG ACAGATAGGA ATTGGGATCA AGAAGATGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016794285.1 |
CDS | 408..1814 |
Translation |
Target ORF information:
Target ORF information:
|
XM_016938796.2 |
1 | ATGGCCAAAA GAAATGCCGA GAAGGAACTG ACAGATAGGA ATTGGGATCA AGAAGATGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc39357 | |
Clone ID Related Accession (Same CDS sequence) | XM_009438581.3 , XM_016938796.2 , XM_009438581.2 , XM_016938796.1 , XM_009438582.1 | |
Accession Version | XM_009438581.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1407bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-01 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | nuclear pore complex protein Nup50 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_006489.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 2, 2016 this sequence version replaced XM_009438581.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Pan troglodytes Annotation Release 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCCAAAA GAAATGCCGA GAAGGAACTG ACAGATAGGA ATTGGGATCA AGAAGATGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_009436856.1 |
CDS | 463..1869 |
Translation |
Target ORF information:
Target ORF information:
|
XM_009438581.2 |
1 | ATGGCCAAAA GAAATGCCGA GAAGGAACTG ACAGATAGGA ATTGGGATCA AGAAGATGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc39357 | |
Clone ID Related Accession (Same CDS sequence) | XM_009438581.3 , XM_016938796.2 , XM_009438581.2 , XM_016938796.1 , XM_009438582.1 | |
Accession Version | XM_016938796.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1407bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-01 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | nuclear pore complex protein Nup50 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_006489.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Pan troglodytes Annotation Release 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCCAAAA GAAATGCCGA GAAGGAACTG ACAGATAGGA ATTGGGATCA AGAAGATGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016794285.1 |
CDS | 408..1814 |
Translation |
Target ORF information:
Target ORF information:
|
XM_016938796.1 |
1 | ATGGCCAAAA GAAATGCCGA GAAGGAACTG ACAGATAGGA ATTGGGATCA AGAAGATGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc39357 | |
Clone ID Related Accession (Same CDS sequence) | XM_009438581.3 , XM_016938796.2 , XM_009438581.2 , XM_016938796.1 , XM_009438582.1 | |
Accession Version | XM_009438582.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1407bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-03-19 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | nuclear pore complex protein Nup50 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_036901.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Pan troglodytes Annotation Release 105 Annotation Version :: 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCCAAAA GAAATGCCGA GAAGGAACTG ACAGATAGGA ATTGGGATCA AGAAGATGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_009436857.1 |
CDS | 135..1541 |
Translation |
Target ORF information:
Target ORF information:
|
XM_009438582.1 |
1 | ATGGCCAAAA GAAATGCCGA GAAGGAACTG ACAGATAGGA ATTGGGATCA AGAAGATGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Major chimpanzee-specific structural changes in sperm development-associated genes. |