Gene Symbol | IFIT1 |
Entrez Gene ID | 450587 |
Full Name | interferon-induced protein with tetratricopeptide repeats 1 |
Gene Type | protein-coding |
Organism | Pan troglodytes(chimpanzee) |
ORF » Species Summary » Pan troglodytes » IFIT1 cDNA ORF clone
Gene Symbol | IFIT1 |
Entrez Gene ID | 450587 |
Full Name | interferon-induced protein with tetratricopeptide repeats 1 |
Gene Type | protein-coding |
Organism | Pan troglodytes(chimpanzee) |
mRNA | Protein | Name |
---|---|---|
NM_001205347.1 | NP_001192276.1 | interferon-induced protein with tetratricopeptide repeats 1 |
XM_009458875.1 | XP_009457150.1 | interferon-induced protein with tetratricopeptide repeats 1 isoform X1 |
Homo sapiens (human) | IFIT1 | NP_001539.3 |
Pan troglodytes (chimpanzee) | IFIT1 | NP_001192276.1 |
IFIT1 | XP_001086535.1 | |
Canis lupus familiaris (dog) | IFIT1 | XP_848364.1 |
Bos taurus (cattle) | IFIT1 | XP_002698403.2 |
Mus musculus (house mouse) | 2010002M12Rik | NP_444447.1 |
Danio rerio (zebrafish) | si:dkey-26g8.12 | XP_005169517.1 |
Canis lupus familiaris (dog) | IFIT1B | XP_848342.2 |
Mus musculus (house mouse) | Gm14446 | NP_001103987.1 |
Rattus norvegicus (Norway rat) | Ifit1lb | XP_220058.2 |
Xenopus tropicalis (tropical clawed frog) | ifit5 | NP_001135660.1 |
Lineage-specific expansion of IFIT gene family: an insight into coevolution with IFN gene family.
Liu Y, Zhang YB, Liu TK, Gui JF
PloS one8(6)e66859(2013)
Major chimpanzee-specific structural changes in sperm development-associated genes.
Kim RN, Kim DW, Choi SH, Chae SH, Nam SH, Kim DW, Kim A, Kang A, Park KH, Lee YS, Hirai M, Suzuki Y, Sugano S, Hashimoto K, Kim DS, Park HS
Functional & integrative genomics11(3)507-17(2011 Sep)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following IFIT1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the IFIT1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OPc00538 | |
Clone ID Related Accession (Same CDS sequence) | NM_001205347.1 | |
Accession Version | NM_001205347.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1437bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-10-12 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | interferon-induced protein with tetratricopeptide repeats 1 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from NBAG03000216.1. On or before Apr 17, 2011 this sequence version replaced XM_507904.2, XM_001142496.1, XM_001142251.1, XM_001142340.1, XM_001142418.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: GABC01007920.1, AK306082.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01120800, SAMN01120804 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGAGTACAA ATGGTGATGA TCATCAGGTC AAGGATAGTC TGGAGCAATT GAGATGTCAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001192276.1 |
CDS | 168..1604 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001205347.1 |
1 | ATGAGTACAA ATGGTGATGA TCATCAGGTC AAGGATAGTC TGGAGCAATT GAGATGTCAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc29660 | |
Clone ID Related Accession (Same CDS sequence) | XM_009458875.1 | |
Accession Version | XM_009458875.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1344bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-03-19 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | interferon-induced protein with tetratricopeptide repeats 1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_036889.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Pan troglodytes Annotation Release 105 Annotation Version :: 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCCTGATT TAGAAAACAG AGTCTTGGAT CAGATTGAAT TCCTAGACAC CAAATACAAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_009457150.1 |
CDS | 370..1713 |
Translation |
Target ORF information:
Target ORF information:
|
XM_009458875.1 |
1 | ATGCCTGATT TAGAAAACAG AGTCTTGGAT CAGATTGAAT TCCTAGACAC CAAATACAAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Lineage-specific expansion of IFIT gene family: an insight into coevolution with IFN gene family. |
Major chimpanzee-specific structural changes in sperm development-associated genes. |