Gene Symbol | PATR-F |
Entrez Gene ID | 100169977 |
Full Name | major histocompatibility complex, class I, F |
Synonyms | MHC-F |
Gene Type | protein-coding |
Organism | Pan troglodytes(chimpanzee) |
ORF » Species Summary » Pan troglodytes » PATR-F cDNA ORF clone
Gene Symbol | PATR-F |
Entrez Gene ID | 100169977 |
Full Name | major histocompatibility complex, class I, F |
Synonyms | MHC-F |
Gene Type | protein-coding |
Organism | Pan troglodytes(chimpanzee) |
mRNA | Protein | Name |
---|---|---|
XM_016954586.1 | XP_016810075.1 | patr class I histocompatibility antigen, CH28 alpha chain isoform X1 |
XM_016954588.1 | XP_016810077.1 | patr class I histocompatibility antigen, CH28 alpha chain isoform X2 |
XM_016954592.1 | XP_016810081.1 | patr class I histocompatibility antigen, CH28 alpha chain isoform X6 |
XM_016954594.1 | XP_016810083.1 | patr class I histocompatibility antigen, CH28 alpha chain isoform X7 |
NM_001129198.1 | NP_001122670.1 | patr class I histocompatibility antigen, CH28 alpha chain precursor |
XM_016954588.2 | XP_016810077.1 | patr class I histocompatibility antigen, CH28 alpha chain isoform X3 |
XM_016954589.2 | XP_016810078.2 | patr class I histocompatibility antigen, CH28 alpha chain isoform X4 |
XM_016954590.1 | XP_016810079.1 | patr class I histocompatibility antigen, CH28 alpha chain isoform X4 |
XM_016954595.1 | XP_016810084.1 | patr class I histocompatibility antigen, CH28 alpha chain isoform X8 |
XM_016954586.2 | XP_016810075.2 | patr class I histocompatibility antigen, CH28 alpha chain isoform X2 |
XM_016954595.2 | XP_016810084.2 | patr class I histocompatibility antigen, CH28 alpha chain isoform X6 |
XM_024356924.1 | XP_024212692.1 | patr class I histocompatibility antigen, CH28 alpha chain isoform X5 |
XM_016954589.1 | XP_016810078.1 | patr class I histocompatibility antigen, CH28 alpha chain isoform X3 |
XM_016954591.1 | XP_016810080.1 | patr class I histocompatibility antigen, CH28 alpha chain isoform X5 |
XM_016954593.1 | XP_016810082.1 | patr class I histocompatibility antigen, CH28 alpha chain isoform X7 |
XM_016954596.1 | XP_016810085.1 | patr class I histocompatibility antigen, CH28 alpha chain isoform X9 |
XM_016954596.2 | XP_016810085.2 | patr class I histocompatibility antigen, CH28 alpha chain isoform X7 |
XM_016954590.2 | XP_016810079.2 | patr class I histocompatibility antigen, CH28 alpha chain isoform X1 |
MHC-F DNA sequences in bonobo, gorilla and orangutan.
Rojo R, Castro MJ, Martinez-Laso J, Serrano-Vela JI, Morales P, Moscoso J, Zamora J, Arnaiz-Villena A
Tissue antigens66(4)277-83(2005 Oct)
Comparative sequencing of human and chimpanzee MHC class I regions unveils insertions/deletions as the major path to genomic divergence.
Anzai T, Shiina T, Kimura N, Yanagiya K, Kohara S, Shigenari A, Yamagata T, Kulski JK, Naruse TK, Fujimori Y, Fukuzumi Y, Yamazaki M, Tashiro H, Iwamoto C, Umehara Y, Imanishi T, Meyer A, Ikeo K, Gojobori T, Bahram S, Inoko H
Proceedings of the National Academy of Sciences of the United States of America100(13)7708-13(2003 Jun)
Comparison of class I MHC alleles in humans and apes.
Lawlor DA, Warren E, Ward FE, Parham P
Immunological reviews113147-85(1990 Feb)
HLA-A and B polymorphisms predate the divergence of humans and chimpanzees.
Lawlor DA, Ward FE, Ennis PD, Jackson AP, Parham P
Nature335(6187)268-71(1988 Sep)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following PATR-F gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the PATR-F cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OPc00263 | |
Clone ID Related Accession (Same CDS sequence) | NM_001129198.1 | |
Accession Version | NM_001129198.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1041bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-26 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | patr class I histocompatibility antigen, CH28 alpha chain precursor | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AF084028.1. ##Evidence-Data-START## Transcript exon combination :: AF084028.1, AF084029.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01120800, SAMN01120804 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGCGCCCC GAAGCCTCCT CCTGCTGTTC TCAGGGGCCC TGGCCCTGAC CGAGACTTGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001122670.1 |
CDS | 5..1045 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001129198.1 |
1 | ATGGCGCCCC GAAGCCTCCT CCTGCTGTTC TCAGGGGCCC TGGCCCTGAC CGAGACTTGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc106826 | |
Clone ID Related Accession (Same CDS sequence) | XM_016954586.2 | |
Accession Version | XM_016954586.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1275bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-03-19 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | patr class I histocompatibility antigen, CH28 alpha chain isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_036885.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 20, 2018 this sequence version replaced XM_016954586.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Pan troglodytes Annotation Release 105 Annotation Version :: 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCGCCCC GAAGCCTCCT CCTGCTGCTC TCAGGGGCCC TGGCCCTGAC CGAGACTTGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016810075.2 |
CDS | 85..1359 |
Translation |
Target ORF information:
Target ORF information:
|
XM_016954586.2 |
1 | ATGGCGCCCC GAAGCCTCCT CCTGCTGCTC TCAGGGGCCC TGGCCCTGAC CGAGACTTGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc106827 | |
Clone ID Related Accession (Same CDS sequence) | XM_016954589.2 | |
Accession Version | XM_016954589.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1302bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-03-19 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | patr class I histocompatibility antigen, CH28 alpha chain isoform X4 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_036885.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 20, 2018 this sequence version replaced XM_016954589.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Pan troglodytes Annotation Release 105 Annotation Version :: 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCGCCCC GAAGCCTCCT CCTGCTGCTC TCAGGGGCCC TGGCCCTGAC CGAGACTTGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016810078.2 |
CDS | 180..1481 |
Translation |
Target ORF information:
Target ORF information:
|
XM_016954589.2 |
1 | ATGGCGCCCC GAAGCCTCCT CCTGCTGCTC TCAGGGGCCC TGGCCCTGAC CGAGACTTGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc106828 | |
Clone ID Related Accession (Same CDS sequence) | XM_016954595.2 | |
Accession Version | XM_016954595.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1335bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-03-19 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | patr class I histocompatibility antigen, CH28 alpha chain isoform X6 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_036885.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 20, 2018 this sequence version replaced XM_016954595.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Pan troglodytes Annotation Release 105 Annotation Version :: 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCGCCCC GAAGCCTCCT CCTGCTGCTC TCAGGGGCCC TGGCCCTGAC CGAGACTTGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016810084.2 |
CDS | 85..1419 |
Translation |
Target ORF information:
Target ORF information:
|
XM_016954595.2 |
1 | ATGGCGCCCC GAAGCCTCCT CCTGCTGCTC TCAGGGGCCC TGGCCCTGAC CGAGACTTGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc106829 | |
Clone ID Related Accession (Same CDS sequence) | XM_016954596.2 | |
Accession Version | XM_016954596.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1308bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-03-19 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | patr class I histocompatibility antigen, CH28 alpha chain isoform X7 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_036885.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 20, 2018 this sequence version replaced XM_016954596.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Pan troglodytes Annotation Release 105 Annotation Version :: 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCGCCCC GAAGCCTCCT CCTGCTGCTC TCAGGGGCCC TGGCCCTGAC CGAGACTTGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016810085.2 |
CDS | 85..1392 |
Translation |
Target ORF information:
Target ORF information:
|
XM_016954596.2 |
1 | ATGGCGCCCC GAAGCCTCCT CCTGCTGCTC TCAGGGGCCC TGGCCCTGAC CGAGACTTGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc85865 | |
Clone ID Related Accession (Same CDS sequence) | XM_016954586.1 | |
Accession Version | XM_016954586.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1275bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-01 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | patr class I histocompatibility antigen, CH28 alpha chain isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_006473.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Pan troglodytes Annotation Release 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCGCCCC GAAGCCTCCT CCTGCTGCTC TCAGGGGCCC TGGCCCTGAC CGAGACTTGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016810075.1 |
CDS | 85..1359 |
Translation |
Target ORF information:
Target ORF information:
|
XM_016954586.1 |
1 | ATGGCGCCCC GAAGCCTCCT CCTGCTGCTC TCAGGGGCCC TGGCCCTGAC CGAGACTTGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc85866 | |
Clone ID Related Accession (Same CDS sequence) | XM_016954588.1 , XM_016954588.2 | |
Accession Version | XM_016954588.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1032bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-01 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | patr class I histocompatibility antigen, CH28 alpha chain isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_006473.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Pan troglodytes Annotation Release 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCGCCCC GAAGCCTCCT CCTGCTGCTC TCAGGGGCCC TGGCCCTGAC CGAGACTTGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016810077.1 |
CDS | 84..1115 |
Translation |
Target ORF information:
Target ORF information:
|
XM_016954588.1 |
1 | ATGGCGCCCC GAAGCCTCCT CCTGCTGCTC TCAGGGGCCC TGGCCCTGAC CGAGACTTGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc85866 | |
Clone ID Related Accession (Same CDS sequence) | XM_016954588.1 , XM_016954588.2 | |
Accession Version | XM_016954588.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1032bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-03-19 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | patr class I histocompatibility antigen, CH28 alpha chain isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_036885.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 20, 2018 this sequence version replaced XM_016954588.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Pan troglodytes Annotation Release 105 Annotation Version :: 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCGCCCC GAAGCCTCCT CCTGCTGCTC TCAGGGGCCC TGGCCCTGAC CGAGACTTGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016810077.1 |
CDS | 84..1115 |
Translation |
Target ORF information:
Target ORF information:
|
XM_016954588.2 |
1 | ATGGCGCCCC GAAGCCTCCT CCTGCTGCTC TCAGGGGCCC TGGCCCTGAC CGAGACTTGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc85867 | |
Clone ID Related Accession (Same CDS sequence) | XM_016954589.1 | |
Accession Version | XM_016954589.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1296bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-01 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | patr class I histocompatibility antigen, CH28 alpha chain isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_006473.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Pan troglodytes Annotation Release 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCGCCCC GAAGCCTCCT CCTGCTGCTC TCAGGGGCCC TGGCCCTGAC CGAGACTTGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016810078.1 |
CDS | 180..1475 |
Translation |
Target ORF information:
Target ORF information:
|
XM_016954589.1 |
1 | ATGGCGCCCC GAAGCCTCCT CCTGCTGCTC TCAGGGGCCC TGGCCCTGAC CGAGACTTGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc85868 | |
Clone ID Related Accession (Same CDS sequence) | XM_016954590.1 | |
Accession Version | XM_016954590.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1101bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-01 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | patr class I histocompatibility antigen, CH28 alpha chain isoform X4 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_006473.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Pan troglodytes Annotation Release 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGAGCCTC GGGAGCCGTG GGTGGAGCAA GAGGGGCCGC AGTATTGGGA GAGGACCACA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016810079.1 |
CDS | 224..1324 |
Translation |
Target ORF information:
Target ORF information:
|
XM_016954590.1 |
1 | ATGGAGCCTC GGGAGCCGTG GGTGGAGCAA GAGGGGCCGC AGTATTGGGA GAGGACCACA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc85869 | |
Clone ID Related Accession (Same CDS sequence) | XM_024356924.1 , XM_016954591.1 | |
Accession Version | XM_024356924.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1062bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-03-19 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | patr class I histocompatibility antigen, CH28 alpha chain isoform X5 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_036885.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Pan troglodytes Annotation Release 105 Annotation Version :: 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCGCCCC GAAGCCTCCT CCTGCTGCTC TCAGGGGCCC TGGCCCTGAC CGAGACTTGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_024212692.1 |
CDS | 180..1241 |
Translation |
Target ORF information:
Target ORF information:
|
XM_024356924.1 |
1 | ATGGCGCCCC GAAGCCTCCT CCTGCTGCTC TCAGGGGCCC TGGCCCTGAC CGAGACTTGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc85869 | |
Clone ID Related Accession (Same CDS sequence) | XM_024356924.1 , XM_016954591.1 | |
Accession Version | XM_016954591.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1062bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-01 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | patr class I histocompatibility antigen, CH28 alpha chain isoform X5 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_006473.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Pan troglodytes Annotation Release 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCGCCCC GAAGCCTCCT CCTGCTGCTC TCAGGGGCCC TGGCCCTGAC CGAGACTTGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016810080.1 |
CDS | 318..1379 |
Translation |
Target ORF information:
Target ORF information:
|
XM_016954591.1 |
1 | ATGGCGCCCC GAAGCCTCCT CCTGCTGCTC TCAGGGGCCC TGGCCCTGAC CGAGACTTGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc85870 | |
Clone ID Related Accession (Same CDS sequence) | XM_016954592.1 | |
Accession Version | XM_016954592.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1041bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-01 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | patr class I histocompatibility antigen, CH28 alpha chain isoform X6 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_006473.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Pan troglodytes Annotation Release 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCGCCCC GAAGCCTCCT CCTGCTGCTC TCAGGGGCCC TGGCCCTGAC CGAGACTTGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016810081.1 |
CDS | 318..1358 |
Translation |
Target ORF information:
Target ORF information:
|
XM_016954592.1 |
1 | ATGGCGCCCC GAAGCCTCCT CCTGCTGCTC TCAGGGGCCC TGGCCCTGAC CGAGACTTGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc85871 | |
Clone ID Related Accession (Same CDS sequence) | XM_016954594.1 , XM_016954593.1 | |
Accession Version | XM_016954594.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 942bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-01 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | patr class I histocompatibility antigen, CH28 alpha chain isoform X7 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_006473.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Pan troglodytes Annotation Release 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAATGGCT GCGACATGGG GCCCGACGGA CGCCTCCTTC GCGGGTATCA CCAGCACGCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016810083.1 |
CDS | 368..1309 |
Translation |
Target ORF information:
Target ORF information:
|
XM_016954594.1 |
1 | ATGAATGGCT GCGACATGGG GCCCGACGGA CGCCTCCTTC GCGGGTATCA CCAGCACGCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc85871 | |
Clone ID Related Accession (Same CDS sequence) | XM_016954594.1 , XM_016954593.1 | |
Accession Version | XM_016954593.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 942bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-01 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | patr class I histocompatibility antigen, CH28 alpha chain isoform X7 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_006473.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Pan troglodytes Annotation Release 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAATGGCT GCGACATGGG GCCCGACGGA CGCCTCCTTC GCGGGTATCA CCAGCACGCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016810082.1 |
CDS | 496..1437 |
Translation |
Target ORF information:
Target ORF information:
|
XM_016954593.1 |
1 | ATGAATGGCT GCGACATGGG GCCCGACGGA CGCCTCCTTC GCGGGTATCA CCAGCACGCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc85872 | |
Clone ID Related Accession (Same CDS sequence) | XM_016954595.1 | |
Accession Version | XM_016954595.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1329bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-01 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | patr class I histocompatibility antigen, CH28 alpha chain isoform X8 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_006473.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Pan troglodytes Annotation Release 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCGCCCC GAAGCCTCCT CCTGCTGCTC TCAGGGGCCC TGGCCCTGAC CGAGACTTGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016810084.1 |
CDS | 85..1413 |
Translation |
Target ORF information:
Target ORF information:
|
XM_016954595.1 |
1 | ATGGCGCCCC GAAGCCTCCT CCTGCTGCTC TCAGGGGCCC TGGCCCTGAC CGAGACTTGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc85873 | |
Clone ID Related Accession (Same CDS sequence) | XM_016954596.1 | |
Accession Version | XM_016954596.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1308bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-01 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | patr class I histocompatibility antigen, CH28 alpha chain isoform X9 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_006473.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Pan troglodytes Annotation Release 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCGCCCC GAAGCCTCCT CCTGCTGCTC TCAGGGGCCC TGGCCCTGAC CGAGACTTGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016810085.1 |
CDS | 85..1392 |
Translation |
Target ORF information:
Target ORF information:
|
XM_016954596.1 |
1 | ATGGCGCCCC GAAGCCTCCT CCTGCTGCTC TCAGGGGCCC TGGCCCTGAC CGAGACTTGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc106825 | |
Clone ID Related Accession (Same CDS sequence) | XM_016954590.2 | |
Accession Version | XM_016954590.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1674bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-03-19 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | patr class I histocompatibility antigen, CH28 alpha chain isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_036885.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 20, 2018 this sequence version replaced XM_016954590.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Pan troglodytes Annotation Release 105 Annotation Version :: 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAAGGGAG ATGGACTGGG TCCATGCCGA ACTCCCTGGT TTCTCAGCCC CCGGGCGAAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016810079.2 |
CDS | 182..1855 |
Translation |
Target ORF information:
Target ORF information:
|
XM_016954590.2 |
1 | ATGAAGGGAG ATGGACTGGG TCCATGCCGA ACTCCCTGGT TTCTCAGCCC CCGGGCGAAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
MHC-F DNA sequences in bonobo, gorilla and orangutan. |
Comparative sequencing of human and chimpanzee MHC class I regions unveils insertions/deletions as the major path to genomic divergence. |
Comparison of class I MHC alleles in humans and apes. |
HLA-A and B polymorphisms predate the divergence of humans and chimpanzees. |